CmaCh11G012870 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G012870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Fasciclin-like arabinogalactan protein
Location	Cma_Chr11 : 8603043 .. 8603627 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCTGGTTTTTTGTTCTTCTTTTCTTGGTTGGGAATGCTCGGGCGACGACTTTCAACCAAACCGACCTGCGAGCAGCCATGGATGACATGAGAATGAAATCTTACCATGGTTTTGTCATACTACTCAAGATCCTAAACAGCTCACATAAAAACTTGCTAAACTCGGATATAACGTTCTTCATGCCTGCTGACCAGGAACTTTCTCGAGCTGCTATTTCGCCTGACCGTATAGAAGAATTTGTTCTTAGTCATTCTATCCCCACAAGATTAGTGCTCAACAATCTCTTGCACTTCCCGAACGGAAGCCTGGTTCCATCGAGCATTCCGAACAGAATGATCAGCATAACCAACTGCAGAAAGATGGGTGTATGTATGAACAATGCACAAATTGTCACCCCAAACGTGTGCTTAAACTCAGCCATAAGATGTCATGGTATAAGCACAACTATTGCATATGACAATACTTCTTTTTCAGACATAAAGCAGAGTTCAGCTGAAACAATAGTTCAGAGGAATGAGAAGAAAGGAGCGAAATCGTTACAGTATGCAGCAATGAAGAAGAACCGTCTGCTGCACTGA

mRNA sequence

ATGGCTTCCTGGTTTTTTGTTCTTCTTTTCTTGGTTGGGAATGCTCGGGCGACGACTTTCAACCAAACCGACCTGCGAGCAGCCATGGATGACATGAGAATGAAATCTTACCATGGTTTTGTCATACTACTCAAGATCCTAAACAGCTCACATAAAAACTTGCTAAACTCGGATATAACGTTCTTCATGCCTGCTGACCAGGAACTTTCTCGAGCTGCTATTTCGCCTGACCGTATAGAAGAATTTGTTCTTAGTCATTCTATCCCCACAAGATTAGTGCTCAACAATCTCTTGCACTTCCCGAACGGAAGCCTGGTTCCATCGAGCATTCCGAACAGAATGATCAGCATAACCAACTGCAGAAAGATGGGTGTATACATAAAGCAGAGTTCAGCTGAAACAATAGTTCAGAGGAATGAGAAGAAAGGAGCGAAATCGTTACAGTATGCAGCAATGAAGAAGAACCGTCTGCTGCACTGA

Coding sequence (CDS)

ATGGCTTCCTGGTTTTTTGTTCTTCTTTTCTTGGTTGGGAATGCTCGGGCGACGACTTTCAACCAAACCGACCTGCGAGCAGCCATGGATGACATGAGAATGAAATCTTACCATGGTTTTGTCATACTACTCAAGATCCTAAACAGCTCACATAAAAACTTGCTAAACTCGGATATAACGTTCTTCATGCCTGCTGACCAGGAACTTTCTCGAGCTGCTATTTCGCCTGACCGTATAGAAGAATTTGTTCTTAGTCATTCTATCCCCACAAGATTAGTGCTCAACAATCTCTTGCACTTCCCGAACGGAAGCCTGGTTCCATCGAGCATTCCGAACAGAATGATCAGCATAACCAACTGCAGAAAGATGGGTGTATACATAAAGCAGAGTTCAGCTGAAACAATAGTTCAGAGGAATGAGAAGAAAGGAGCGAAATCGTTACAGTATGCAGCAATGAAGAAGAACCGTCTGCTGCACTGA

Protein sequence

MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDITFFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNCRKMGVYIKQSSAETIVQRNEKKGAKSLQYAAMKKNRLLH

Homology

[Close]

BLAST of CmaCh11G012870 vs. TrEMBL
Match: A0A0A0K7Q8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272100 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.0e-57
Identity = 128/197 (64.97%), Postives = 138/197 (70.05%), Query Frame = 1


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MA WFFVLLFLV  A AT  NQ DL+AAMD+MR+KSYHGF ILLKILNS+ K L NS+IT
Sbjct: 1   MAPWFFVLLFLVAKAHATMTNQIDLQAAMDEMRLKSYHGFAILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNC 120
           FFMP DQELS+A ISPDR+EEFVLSHSIPT L+LNNLLHFPNG+LVPSSIPNRMI ITNC
Sbjct: 61  FFMPTDQELSQADISPDRLEEFVLSHSIPTALLLNNLLHFPNGTLVPSSIPNRMIRITNC 120

Query: 121 RKMGVYI--------------------------------------KQSSAETIVQRNEKK 160
           RKMGV +                                      KQSSAE IVQRNE K
Sbjct: 121 RKMGVCLNNARIITPNVCLTSSIRCHGISTAISYDKTSFSDTLPAKQSSAEIIVQRNEIK 180

[Close]

BLAST of CmaCh11G012870 vs. TrEMBL
Match: A0A0A0K6H7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G033340 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.5e-52
Identity = 121/197 (61.42%), Postives = 132/197 (67.01%), Query Frame = 1


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           M  WFFVLLFLV  A+AT  NQTDL+AAMD+MR+KSYHGFVILLKILN+S+K L NSDIT
Sbjct: 1   MTPWFFVLLFLVAKAQATMTNQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNC 120
           FFMP DQELS+A IS D++EEFVL HSIPT L+LNNL HFPNGSLVPSSIPNRMI IT  
Sbjct: 61  FFMPTDQELSQADISLDQLEEFVLRHSIPTTLLLNNLSHFPNGSLVPSSIPNRMIKITKS 120

Query: 121 RKMGVYIK--------------------------------------QSSAETIVQRNEKK 160
           R MGV +                                       QS AE IVQRNEKK
Sbjct: 121 RMMGVCVNDALIVTPNVCLTSSIRCHGISTAISYDKNSFSDTLPAKQSLAEPIVQRNEKK 180

[Close]

BLAST of CmaCh11G012870 vs. TrEMBL
Match: A0A151S043_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_030232 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-35
Identity = 80/137 (58.39%), Postives = 108/137 (78.83%), Query Frame = 1


Query: 1   MASWFFVLL--FLVGNARATT-FNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNS 60
           MA WF VLL  F +G +++TT FNQTDL+AAM DMR +SY GFVILLKILNS   +L N+
Sbjct: 1   MALWFMVLLALFAIGESQSTTSFNQTDLQAAMTDMRSRSYFGFVILLKILNSQPNSLQNN 60

Query: 61  DITFFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISI 120
           D+TF MP D+ELS  +I+ D++ +F+LSHSIPT L+L++LLHFPNGS+VPSS+P+R+ISI
Sbjct: 61  DLTFLMPNDEELSHFSIALDQLHDFILSHSIPTPLLLSHLLHFPNGSVVPSSVPSRVISI 120

Query: 121 TNCRKMGVYIKQSSAET 135
           TN  + G+++  +   T
Sbjct: 121 TNSGRTGLFVNNARIVT 137

[Close]

BLAST of CmaCh11G012870 vs. TrEMBL
Match: K7M477_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G007200 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.3e-35
Identity = 79/137 (57.66%), Postives = 109/137 (79.56%), Query Frame = 1


Query: 1   MASWFFVLL--FLVGNARAT-TFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNS 60
           MA WF +LL  F +G +++T +FNQTDL+AAM DMR +SY+GFVILLKILNS   +L N+
Sbjct: 1   MAIWFVILLTFFAIGESQSTMSFNQTDLQAAMTDMRSRSYYGFVILLKILNSQPNSLQNN 60

Query: 61  DITFFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISI 120
           D+TF MP D ELS+ +I+ D++ +F+LSHSIPT LVL++LLHFPNGS+VPSS+P+R+ISI
Sbjct: 61  DLTFLMPNDDELSQFSIALDQLHDFILSHSIPTPLVLSHLLHFPNGSVVPSSVPSRVISI 120

Query: 121 TNCRKMGVYIKQSSAET 135
           TN  + G+++  +   T
Sbjct: 121 TNGGRTGLFVNNARIVT 137

[Close]

BLAST of CmaCh11G012870 vs. TrEMBL
Match: G7KEP1_MEDTR (Fasciclin-like arabinogalactan protein OS=Medicago truncatula GN=MTR_5g097370 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-33
Identity = 74/138 (53.62%), Postives = 106/138 (76.81%), Query Frame = 1


Query: 1   MASWFFVLLFL--VGNARATT--FNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLN 60
           MA WF ++L L  VG +++TT  FNQTDL+ AM DM+ +SY+GFVILLKILNS    + N
Sbjct: 1   MALWFVLILTLLAVGESQSTTAAFNQTDLQTAMSDMQSRSYYGFVILLKILNSLPNQMQN 60

Query: 61  SDITFFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMIS 120
           +D+TF MP D++LS  +I+P+ + +F+LSHSIPT L+LN+LLHFPNGS+VPS +P+++IS
Sbjct: 61  NDLTFLMPNDEDLSHFSIAPEELHDFLLSHSIPTPLLLNHLLHFPNGSIVPSGLPSKVIS 120

Query: 121 ITNCRKMGVYIKQSSAET 135
           ITN  + G+++  +   T
Sbjct: 121 ITNNARAGLFVNNARIVT 138

[Close]

BLAST of CmaCh11G012870 vs. TAIR10
Match: AT5G26730.1 (AT5G26730.1 Fasciclin-like arabinogalactan family protein)

HSP 1 Score: 118.2 bits (295), Expect = 4.5e-27
Identity = 57/119 (47.90%), Postives = 83/119 (69.75%), Query Frame = 1


Query: 16  RATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDITFFMPADQELSRAAIS 75
           R   +NQTDL +AM DMR +SY+GFVILL+ LN ++    N+DITF MP+D ++S A I+
Sbjct: 109 RHDNYNQTDLISAMTDMRRQSYNGFVILLRFLNDTNY-FRNTDITFLMPSDNDISHADIT 168

Query: 76  PDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNCRKMGVYIKQSSAET 135
           P+ +E F+L H+IP  L++N++LHFPN +LVP S  +RM +IT     G+Y+  +   T
Sbjct: 169 PESLETFILKHTIPAWLMINHMLHFPNRTLVPCSFSDRMFTITKSGGSGIYVNNARIVT 226

[Close]

BLAST of CmaCh11G012870 vs. TAIR10
Match: AT5G16920.1 (AT5G16920.1 Fasciclin-like arabinogalactan family protein)

HSP 1 Score: 75.1 bits (183), Expect = 4.4e-14
Identity = 43/121 (35.54%), Postives = 71/121 (58.68%), Query Frame = 1


Query: 21  NQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDITFFMPADQELSRAAI--SPDR 80
           N  +L  A+++M   +Y  FV+L+ +L S +   L +++TF MP D+ LS + I    D 
Sbjct: 32  NNHELSIAIEEMEKANYFSFVMLINMLPSVNPRFL-ANVTFLMPKDKTLSTSNIINQQDS 91

Query: 81  IEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNCRKMGVYIKQSSAETIVQR 140
           + EF+L HSIP+ L+  +L   PNGS+VPSS+P+  + I+N  +   ++       I+ R
Sbjct: 92  VTEFLLRHSIPSSLLFEHLNLIPNGSIVPSSLPHYTLEISNGGRSNYFLNNVK---IISR 148

[Close]

BLAST of CmaCh11G012870 vs. NCBI nr
Match: gi|449463404|ref|XP_004149424.1| (PREDICTED: uncharacterized protein LOC101220860 [Cucumis sativus])

HSP 1 Score: 228.0 bits (580), Expect = 1.1e-56
Identity = 128/197 (64.97%), Postives = 138/197 (70.05%), Query Frame = 1


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MA WFFVLLFLV  A AT  NQ DL+AAMD+MR+KSYHGF ILLKILNS+ K L NS+IT
Sbjct: 1   MAPWFFVLLFLVAKAHATMTNQIDLQAAMDEMRLKSYHGFAILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNC 120
           FFMP DQELS+A ISPDR+EEFVLSHSIPT L+LNNLLHFPNG+LVPSSIPNRMI ITNC
Sbjct: 61  FFMPTDQELSQADISPDRLEEFVLSHSIPTALLLNNLLHFPNGTLVPSSIPNRMIRITNC 120

Query: 121 RKMGVYI--------------------------------------KQSSAETIVQRNEKK 160
           RKMGV +                                      KQSSAE IVQRNE K
Sbjct: 121 RKMGVCLNNARIITPNVCLTSSIRCHGISTAISYDKTSFSDTLPAKQSSAEIIVQRNEIK 180

[Close]

BLAST of CmaCh11G012870 vs. NCBI nr
Match: gi|659124020|ref|XP_008461950.1| (PREDICTED: uncharacterized protein LOC103500429 isoform X1 [Cucumis melo])

HSP 1 Score: 216.1 bits (549), Expect = 4.5e-53
Identity = 121/198 (61.11%), Postives = 135/198 (68.18%), Query Frame = 1


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           MA WFFVLLFL+  A AT  NQ DL+AAMD MR+KSYHGF ILLKILNS+ K L NS+IT
Sbjct: 1   MAPWFFVLLFLMTKAHATMTNQIDLQAAMDQMRLKSYHGFTILLKILNSTTKTLQNSNIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNC 120
           FFMP DQELS+A ISP+R+++FVLSHSIPT L+LNNLLHFPNGSLVPSSIPNRMI ITNC
Sbjct: 61  FFMPTDQELSQADISPNRLKDFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNC 120

Query: 121 RKMGVYI---------------------------------------KQSSAETIVQRNEK 160
           RKMGV +                                       KQSSA+ IVQRNE 
Sbjct: 121 RKMGVCVNNARIITPNVCLTSSIRCHGISSAISYDKTSAFSDTLPAKQSSADIIVQRNEM 180

[Close]

BLAST of CmaCh11G012870 vs. NCBI nr
Match: gi|700188193|gb|KGN43426.1| (hypothetical protein Csa_7G033340 [Cucumis sativus])

HSP 1 Score: 212.6 bits (540), Expect = 5.0e-52
Identity = 121/197 (61.42%), Postives = 132/197 (67.01%), Query Frame = 1


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           M  WFFVLLFLV  A+AT  NQTDL+AAMD+MR+KSYHGFVILLKILN+S+K L NSDIT
Sbjct: 1   MTPWFFVLLFLVAKAQATMTNQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNC 120
           FFMP DQELS+A IS D++EEFVL HSIPT L+LNNL HFPNGSLVPSSIPNRMI IT  
Sbjct: 61  FFMPTDQELSQADISLDQLEEFVLRHSIPTTLLLNNLSHFPNGSLVPSSIPNRMIKITKS 120

Query: 121 RKMGVYIK--------------------------------------QSSAETIVQRNEKK 160
           R MGV +                                       QS AE IVQRNEKK
Sbjct: 121 RMMGVCVNDALIVTPNVCLTSSIRCHGISTAISYDKNSFSDTLPAKQSLAEPIVQRNEKK 180

[Close]

BLAST of CmaCh11G012870 vs. NCBI nr
Match: gi|659124299|ref|XP_008462085.1| (PREDICTED: uncharacterized protein LOC103500524 [Cucumis melo])

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51
Identity = 121/197 (61.42%), Postives = 134/197 (68.02%), Query Frame = 1


Query: 1   MASWFFVLLFLVGNARATTFNQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDIT 60
           M   FFVLL L+  A+A   NQTDL+AAMD+MR+KSYHGFVILLKILN+S+K L NSDIT
Sbjct: 1   MTPSFFVLLLLLAKAQAIMTNQTDLQAAMDEMRLKSYHGFVILLKILNNSNKTLQNSDIT 60

Query: 61  FFMPADQELSRAAISPDRIEEFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNC 120
           FFMP DQELS+A IS D++EEFVLSHSIPT L+LNNLLHFPNGSLVPSSIPNRMI IT  
Sbjct: 61  FFMPTDQELSQADISLDQLEEFVLSHSIPTSLLLNNLLHFPNGSLVPSSIPNRMIKITKS 120

Query: 121 RKMGVYI--------------------------------------KQSSAETIVQRNEKK 160
           RKMGV +                                      KQ+ AETIVQRNEKK
Sbjct: 121 RKMGVCVNEARIVTPNVCLTSSIRCHGISTAISYDKTSFSETLPAKQNLAETIVQRNEKK 180

[Close]

BLAST of CmaCh11G012870 vs. NCBI nr
Match: gi|659124022|ref|XP_008461951.1| (PREDICTED: uncharacterized protein LOC103500429 isoform X2 [Cucumis melo])

HSP 1 Score: 193.7 bits (491), Expect = 2.4e-46
Identity = 108/178 (60.67%), Postives = 121/178 (67.98%), Query Frame = 1


Query: 21  NQTDLRAAMDDMRMKSYHGFVILLKILNSSHKNLLNSDITFFMPADQELSRAAISPDRIE 80
           NQ DL+AAMD MR+KSYHGF ILLKILNS+ K L NS+ITFFMP DQELS+A ISP+R++
Sbjct: 3   NQIDLQAAMDQMRLKSYHGFTILLKILNSTTKTLQNSNITFFMPTDQELSQADISPNRLK 62

Query: 81  EFVLSHSIPTRLVLNNLLHFPNGSLVPSSIPNRMISITNCRKMGVYI------------- 140
           +FVLSHSIPT L+LNNLLHFPNGSLVPSSIPNRMI ITNCRKMGV +             
Sbjct: 63  DFVLSHSIPTALLLNNLLHFPNGSLVPSSIPNRMIRITNCRKMGVCVNNARIITPNVCLT 122

Query: 141 --------------------------KQSSAETIVQRNEKKGAKSLQYAAMKKNRLLH 160
                                     KQSSA+ IVQRNE  GAKS +  AMKKNR LH
Sbjct: 123 SSIRCHGISSAISYDKTSAFSDTLPAKQSSADIIVQRNEMNGAKSSESGAMKKNRSLH 180

The following BLAST results are available for this feature:

BLAST of CmaCh11G012870 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh11G012870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7Q8_CUCSA	8.0e-57	64.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G272100 PE=4 SV=1	[more]
A0A0A0K6H7_CUCSA	3.5e-52	61.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G033340 PE=4 SV=1	[more]
A0A151S043_CAJCA	1.0e-35	58.39	Uncharacterized protein OS=Cajanus cajan GN=KK1_030232 PE=4 SV=1	[more]
K7M477_SOYBN	2.3e-35	57.66	Uncharacterized protein OS=Glycine max GN=GLYMA_14G007200 PE=4 SV=1	[more]
G7KEP1_MEDTR	2.8e-33	53.62	Fasciclin-like arabinogalactan protein OS=Medicago truncatula GN=MTR_5g097370 PE...	[more]

BLAST of CmaCh11G012870 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26730.1	4.5e-27	47.90	Fasciclin-like arabinogalactan family protein	[more]
AT5G16920.1	4.4e-14	35.54	Fasciclin-like arabinogalactan family protein	[more]

BLAST of CmaCh11G012870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449463404\|ref\|XP_004149424.1\|	1.1e-56	64.97	PREDICTED: uncharacterized protein LOC101220860 [Cucumis sativus]	[more]
gi\|659124020\|ref\|XP_008461950.1\|	4.5e-53	61.11	PREDICTED: uncharacterized protein LOC103500429 isoform X1 [Cucumis melo]	[more]
gi\|700188193\|gb\|KGN43426.1\|	5.0e-52	61.42	hypothetical protein Csa_7G033340 [Cucumis sativus]	[more]
gi\|659124299\|ref\|XP_008462085.1\|	2.5e-51	61.42	PREDICTED: uncharacterized protein LOC103500524 [Cucumis melo]	[more]
gi\|659124022\|ref\|XP_008461951.1\|	2.4e-46	60.67	PREDICTED: uncharacterized protein LOC103500429 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G012870.1	CmaCh11G012870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36069	FAMILY NOT NAMED	coord: 1..127 score: 1.6
None	No IPR available	PANTHER	PTHR36069:SF2	FASCICLIN-LIKE ARABINOGALACTAN FAMILY PROTEIN	coord: 1..127 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G012870	CmoCh11G018350	Cucurbita moschata (Rifu)	cmacmoB117
CmaCh11G012870	Bhi05G001278	Wax gourd	cmawgoB0115

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G012870	Melon (DHL92) v3.5.1	cmameB094
CmaCh11G012870	Melon (DHL92) v3.5.1	cmameB095
CmaCh11G012870	Watermelon (Charleston Gray)	cmawcgB097
CmaCh11G012870	Watermelon (97103) v1	cmawmB121
CmaCh11G012870	Cucurbita pepo (Zucchini)	cmacpeB118
CmaCh11G012870	Cucurbita pepo (Zucchini)	cmacpeB123
CmaCh11G012870	Cucurbita pepo (Zucchini)	cmacpeB154
CmaCh11G012870	Bottle gourd (USVL1VR-Ls)	cmalsiB090
CmaCh11G012870	Bottle gourd (USVL1VR-Ls)	cmalsiB100
CmaCh11G012870	Cucumber (Gy14) v2	cgybcmaB710
CmaCh11G012870	Cucumber (Gy14) v2	cgybcmaB899
CmaCh11G012870	Melon (DHL92) v3.6.1	cmamedB102
CmaCh11G012870	Melon (DHL92) v3.6.1	cmamedB103
CmaCh11G012870	Silver-seed gourd	carcmaB0272
CmaCh11G012870	Silver-seed gourd	carcmaB0483
CmaCh11G012870	Silver-seed gourd	carcmaB1471
CmaCh11G012870	Cucumber (Chinese Long) v3	cmacucB0176
CmaCh11G012870	Watermelon (97103) v2	cmawmbB101
CmaCh11G012870	Cucurbita maxima (Rimu)	cmacmaB151
CmaCh11G012870	Cucurbita maxima (Rimu)	cmacmaB155
CmaCh11G012870	Cucumber (Gy14) v1	cgycmaB0215
CmaCh11G012870	Cucumber (Gy14) v1	cgycmaB0294
CmaCh11G012870	Cucurbita moschata (Rifu)	cmacmoB145
CmaCh11G012870	Cucurbita moschata (Rifu)	cmacmoB149
CmaCh11G012870	Wild cucumber (PI 183967)	cmacpiB151
CmaCh11G012870	Cucumber (Chinese Long) v2	cmacuB141
CmaCh11G012870	Cucumber (Chinese Long) v2	cmacuB153