CmaCh11G012310 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh11G012310
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionNADH-ubiquinone oxidoreductase chain 4
LocationCma_Chr11 : 8018400 .. 8025487 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGATTCTTGCCGAATCCGAGTTTGCTGCTCCAACCATTACCAAACTAATACCTATTCTGTTTAGTACTTCAGGTGCTTCTGTTGCGTATAATGTCAATCTCGTAGCGGATCAATTCCAACGAGCCTTTCAAACTAGTACTTTTTGTAATCGACTCTATAGCTTCTTCAATAAACGCTGGTTCTTCGATCAAGTTTTGAATGACTTTCTAGTCAGATCGTTCCTGCGTTTCGGATATTCAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCCCTATGGTATCTCGTACACATTCCGACGATTGGCCGAGCGAATCAGTCAACTTCAAAGTGGATTTGTTGTGCGAAGAGTGCGTTATGACCCGTGGGCGCCTGCCTGGTGGGGGCGGCTCCTCCGTTGTGGGTAAACGGGAAACCCGACTCTACGAACCCGAGGAAAGGCTGCACAGCAGTAGTCAGGGCGTTAAGACCGGAGCTTTTTGTAGTGCTAGCAGTATAATGCAAGTGAATGAATTCCATCCCCTATCAAGTTCAGTGCTTACGCCCCTTTAGAGATAGGGAGAGGGGCGAGCAAAAGAGCTCGTTCTTCCATTTTGAGATCTTTAGATTCGTAAGATCATGATAGAGTCCCCTTTACTTGATATTAAATTCTTAAAGCTCCCGCCGCCCTACAACTAGTCTAGTATTGCAGAGCTGCCAGCTTCAAAGCTGACCTGATTATTAGAGAAAGGGGCGCGCTAGCCTAGCGCTAGAATAATATACAATACAAGGTTAGGGGGCTGAAAAGCTGTTGTTTGCTGTCTACTTCGCGAGCCTTCACAGCCCCGTTCTGTAACTTCCCTTCTTTCGTCCGTCCACGAGGCTGTAAAAAGAGAGAAAGGGGCGGCTATCTAGTGGGAGTCGTTTCGGTTGTATGCCACGAGGTCCCTATGGACAAGGGGACAAGTGAATCATCGCTTTTGGGCGCAGGCAGCCCTCTACCATCCATCCCATTGCATTCCATCGTCTCGTATTGCTTTACTAAGCCGTATCAGACCAGATACATCTATTGAGTGAGAGAAAGGGAGAAAACTCTAAATATTCTTCATTTTGATATTGATAGGGATCCCCATTCATTCCGTCATTCCCGTCACTACGGATTGATTGTCCCTACCTAACTACATGGTTGTGGTCTAGGGAGCGCAATTGCTAGAGCACGGGAGAATGAAGAGTAATGATTTCAGCAAGAGCAGCCGGACGAACTACTATAGTGAGTCTAGTGACTACTAGAGTCGAGTTGAGTCAAAAGGTATGGTATAGCAGCCTTTCCGAGCGAGCCTCTGGGATCTCCTGTAAACCCCCATGATGTGGTAAAGGGAGGATATTAGGGGAAGCAGTGAGTGGAGATTCCCCTGCAGAGAGCCGGATGAGGGGAGACCTTCACGTCCGGTTCGGAGGGCGGGGATATCCCGACCCTACTATCATTATGCCTTTGCAATCTTACTTGGTTTAACTCTATTTGTGACCTTTTCTCGTATGTGGGACTCTCTATCTTCTTGGGTAGATAATCGATCGTCTTTCATTTTGATAGTGAGTCATTTTTATATATAATAATAAGTCAAGAATAATAATCGAACTGGAGGAGCGAAGCTGCTCGACGAGAAGAGGAGAGGAGCGAAGCAGTGAGACCAATAGAATAGGTTCAGGCAATGGAATTGGCTTTACCGAGTTGACGAGGGGAAGGAGCGAAGCCAGGATGGCTTGGTAAGCAAGCAACCTGTTATGTAGGCCCCAACTCCAAGTTCTTTCTCTTCTTTCTTTTTGAGTTTAGTGAGTGTTCATCAAAACAATTGTCCAAGATTGCTAGATCGAGCACGCGACGCGCATAGTCTGAAGTTCAAGAGCGGGTTGTCTCCTCTTCAACATTTCTACTACTACTTACTTGCCTTCCCTTTTCAGAGATCTCCTTGTTCTCTTCCCAGATTTTCCTCCATATCTTCCCTCTTCTTTCTTTGTGGCTTCTTCATCATCTTGTTCCATCCTTCAGGTTCGGTAGGTGTCCGGGCCTCCTAAAAAATCCTTCCGACAAGAATGCTGGCTGCTTTAACATTGTAAGACATTGAACCGTCTTGCTCTTGTGAACACTGATGATCAGTGGCAAAAGCCGCCGGGATCCTCATTTTTTGTCCATAAGCTCTCCTCGTGTAAGAAAGAGAAAGGAAACTGTACCCGACCAGGGATGGACGTAAACTCGTAAGCTACAGAGGGTAGGGATAATCGTCCAGGTCTCTTATTGTGAAAGAAAAAAGCCGCCCCGCCACAGCAGGCGGGTTGGTTCCTCTGTCGTCGCCGGGGAGCTCTTGGTGAGGAGACCTTAGGAGAAGTTGCTAAAACAAACGGGAGGGGAGGATCGACCCGTTCAGTAGAATTCCGAAGAAAGACTGTTGGCAGCTGGTGGAGACATTTCTTTGGCCCCCTTCAAAAAAAGGAAATGCGGGTTGGGTGAAGCTCGGCAGAGAGTTCGAGAATAGGGTAGGGTCCTGCCCTTAAGATGAAGATCAGATTCGAGTTCCAAACCTTTATGCATGCACCCCCGTACAAGTGCTGCGTACAAGTTCCGGCCAGGATAATTGGGAAAGATCAAACCAATTTGAACCGCTCACATCACAGTAGTAGTAGCGTAAAGGCCGTAAGTCGGGGGGCGGCCATAACATAAGGCTATTACTTTCACATCTCTCTCCATCTTTAGATATCTAGAGAGAGATAGAGATCCGCTGCGTGATCAACCCGACTGTGCCTTACATGTGCTCTACAGGCCGCACTCCATCTTTCTTCCCAACGAGCCCATTTTTCTTTTGATTTGGAAGACGGGCGTTGCGTTCGAAAGGCATGGTTTTCAGTATGTCTCCAGATAGGGCCCCACTAGTCCGGCTAGCTAGTGAGCGGTTCTTTCGGGCGAGAAGCGGGCATCTCCCGCAACGCAAGCTGCATTGTTCGCCACTATCCGAGAAGCAAAAGATTCGAGAGTCCAGGCTGAAAATACATGCATAGATAGTGGTCTAATGACAAGGGCCGAGGAAGCTCGGGACGGAGCCGTATGATGCGGAAGTCTCACGTACGGTTCCCTAAGAAGGGAGTGGCTACCTATTGGAGCTTCGACCAACTACCATCGGTCAATTCCGCTTTGGGGCCACCCCTGACTCTACCATTATTATAGGGGTATGGGGTTCGAGACAAAGAAAGATCAAGGCAGCATATCAGTTTTTCCTTTATACTTTACTGGGATCCGTTTTTATGCTATTAGCTATTCTGTTGATTCTTCTCCAAACAGGAACCACCGATTTACAAATCTCATTAACCACTGAATTTAGTGAGCGGCGCCAAATCTTTCTATGGATTGCTTCTTTCGCCTCTTTCGCCGTCAAAGTGCCTATGGTACCAGTTCATATTTGGTTACCCGAAGCTCATGTAGAGGCACCTACGGCAGGATCCGTCATCTTGGCAGGAATTCTTTTAAAATTGGGAACCCACGGGTTTTTAAGATTTTCTATACCCATGTTTCCCGAAGCCACACTTTGTGCCACTCCTTTCATTTATACTTTAAGTGCGATTGCTATAATATATACTTCCTTGACCACTTCAAGACAGATCGATCTTAAGAAGATCATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGGTATCTTTAGTCGGGCGGCGGCCGTTAGGTCACCTATTTTGAGTTATGGACACACAAGGCCAAAACATGTGTGCCGGGCGTGCGACCCATCAACCTACTAGCAATGGGGGAGAAAACATAGCATGTCGCAACAAAAGCTTGATTCGAGGCGTCAGCAAAACACTGCCGTCTGTTCCAAAAACAAAAGCCCCTTAGCGCCCCGGGACGGGAGTGGGGGACGGCCCTACGCGCAGGCAACAGCAGCACCAGCTCTACGAAGTCAGAATCGAATCTTTCTGCTGGCTTTCCCAATTCTTTCGTGAATCAGAATGAAAGGACTAGAAGCTCTAGCTTCTAGCTACTTCGCCTGCTTATTATTATGACGGAAATGAACGTGCTATTTTCAAATCGATTGATAGATAGCCTGATCTGTTCTGATAGATCGAAAGAGTGGAAATGTCTCGAGAGGGGATCCATCAATAATAAGGAGAAATCTCCTATTTCTATCTATTCTTGATCCATCTGAAAGAAATCGATATGTATCTGATGGAGTCTACATTGTACGTAGAGCGCCCAAGCGCTTTTTAGGCCTGCTCCGTTCTCTTATCCATCGGTCCAATGCACTGGGCTCATCTCGTGGAGGGAAAAGCCAACATTGAGTTGTAGTCTTGTTGTTCGCCGCCTCGACGCATTCCCTTCTCTCCCTGGCATCGTCCCACACAGAAAGAAAGAGCGCAGAGCCCCGGCCCGACCTGTGGGTCCGCTAACGTAAAGCGAGGAGTTGAGCCTGAACTGGCGAAACGAAGTCACTTTCGGAACCATACTTCCTACAGCGAACACGTGTCCAGCGGGAACGCGCAGCGCAACCGAACGTGAGCTGCTATACCGAATCCCCCGCTGCCCATCGGGGACCGAGTGGTAAGGCCATGATCCGTAGGGGAACAGATCACTCATTTCTTCCATTGGGGACAGGTGCACGAACGACAACTCCAAACGTCACACATCCGTCGCCTACCTACCGTTTAGGTGGCACCAGCGAGATCTAGCTAAGGTAAGGAACTTCGTGTCGCGGCTGCTCCACTCTGCCGCGGTCTCATGAACTGAACTTCGTTGCCTTCCTGCGTGCGAAGCGAATTGGCGTTGTGCTCTGGGTCAGTTTTGGGGCGGGGAGCGAAGAGAGACCAGAAGAATGATTCATTTGGATGAGGTTTTTAAGCCCCAAAACTCAGAATCCATGGAATGAATGTATCTAAATCCATGAAAAGATCTATTCTATCTGTATAGATAGGGGATGGGATCTCTCTATACATATCAAATCGTTTTATGGCATGATATGATCGCCTAGCCCCGCATATCAGCTGCGCTCAATATGCGGGATTTCTGTTGGATCTGATCTTTCGGGAAGCTTTTGGACCGAGCGAAAAGGACTTTCAGCCTTTGCGCAAGCAAGCAAAGTCGAAGCTTTGCCAGAAGCAAGACGAGGAAGCGGAGCTGTCGTATAAACGGTAGCTTTCCCCGACCTATTTTGATTCAAAAGAAAGGCGAAGGGTTTTTTGGCAACAAGCAAACGACTTTCTATCATAGTTGCAAGGGTTCCAAACCTTAACTACAACATGTTGTACCAAAGGCTGATTTCGGTTGGTTGAATAAGGGGGCCGTTCCATAAGATAAGTCGACGTTCAATCTCTAAGGCGGGTTTCCGCTGAGAACGGAATAGTGTTCGTGTCCAAAGGTGAATAAAGCCCTAGCTTCTAGAGTTCGCTGCTTTTCCCAGGCCGGAGAAGGGCTTATACTGATCGCCTTTGTTTGATATGTTCATTCAGTACCAATACAAACTACAACTACACTAAAGTGGAAGGGCTACTATAGAAGCTAGAAGTAGCCTCTCGTAAAGTCAGTAGTCGGCCTAATCAAAGCGCCACGACAACAACAAATTACCCTGATTCATCGAATGGAATCTTAATTCAATCAATAGGGGGCCGCCTACCAATCAAAGAGGCTGGAAGACTTTCCACTTCATTGAAAAAGGGAAGGGGAGAGGGAAGCGAAGCTTAGCGAGCTTTCTGCCGGCCGACCACTACATAAGACGCTGCCGTCGAGCTTTCTCCGCCAGCTTCCTTTCATTCGCTTCGCGGGAGCCGCACAGCACATAGCTGGAAGTCAGAGGGCCCATACTACCTGCCTAACCCCTCGCTCCGAGGGACCGTAGATCGGAAAGCGCCTGAAAAATCACCCCATTCATCCAACCAAAAGAGAAGGGGCCTATGTATTTGCATGACCCCTGCAGATTTGACTCTATCTACACTCGGAGCCAATCCCCTATCGGTCCTGTCACCACGCCGCAGAACGGGAGCTCGTGTGGAACCTTTTCTTTCTGGTGTAACTGCGGTGAAACGTAACAAAATCTTACGGTCGCGTAATAGAAGGGCCGGAGGTACGGTAAACTCAGCCAAAATATGACACCCGAAGGGCCCGGCGCGCACAATCCTATCCTATCTGAGTCCGAGTTTACCCTTGCACTTCGGACAGCCGTCCGTAGCATCATAAGGAGGACCCCCTTTCGAGGTCAAAAAATGGTACGGTACATAGGAGGCTGGTCTTTCTCAACGTGGTGTATAGCACGAAAAACCTTTCGATACAAGATAGGGCCGTTCACATGAAAGAAGAGAAGAAAGACTTTCTTCTTTTCTTTCTCTTTTTCGCCAGTGCTGACGCAGTGCGCACGTAGATAAGGAAAGCCAAATCCCAGTGGGGGGCCGGTACCTTTCTTTTACGGCCTAAATTCCTATTTGTCAGCCGTGGGGAACTACTGCTCGGTCGGGAAGAGGCGAAAGGCTTGGGCCTACCTATCCCGATAGGACCTCATAAAGGAACGGGAGTGAGAGGTTCCATATTGCCGAGCCGAAGGGCAGCACTTCTGTACGTGATCGTAGTATGTCACCTCGTCTCGTCCCCGCACCGCAGCATTGAAGAGTATCTATGCACTATTTCCGGTTCACTGATAAGGAAGATAGAGTTGGGCTGGGGGTGACAGATGTGATACGTCAAGTATGACCCGGAGAGATACATGCTAACTATGGGTAGAAAGCAGGAACCATTATGTAATGAATTTCGGGGGGTTACAGATCTCTTATACTACCATTGATCGACAGAGCGGAACAACCAGAAAAAGAAGTGAAGTTAGAAAGCCGTATGATAGGTGGTAACTATCTTGTACGGTTCGGGGGGTAATCGGCGTACTCGTATCAGTGGGGGGGAATCTTTGGCTCTATCGAACATACAGGGAATTGGAGGTAGCATTCTACCGATGTTAAGTCATGGGCTGGTTCCTTCAGCCCTTTTTCTATGTGTTGGGGTTCTATATGACCGACATAAGACTCGACTTGTTAGATATTACGGAGGTTCA

mRNA sequence

ATGAGATTCTTGCCGAATCCGAGTGCTTCTGTTGCGTATAATGTCAATCTCGTAGCGGATCAATTCCAACGAGCCTTTCAAACTAGTACTTTTTGTAATCGACTCTATAGCTTCTTCAATAAACGCTGGTTCTTCGATCAAGTTTTGAATGACTTTCTAGTCAGATCGTTCCTGCGTTTCGGATATTCAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCCCTATGGTATCTCGTACACATTCCGACGATTGGCCGAGCGAATCAGTCAACTTCAAACTATTCTGTTGATTCTTCTCCAAACAGGAACCACCGATTTACAAATCTCATTAACCACTGAATTTAGTGAGCGGCGCCAAATCTTTCTATGGATTGCTTCTTTCGCCTCTTTCGCCGTCAAAGTGCCTATGGTACCAGTTCATATTTGGTTACCCGAAGCTCATGTAGAGGCACCTACGGCAGGATCCGTCATCTTGGCAGGAATTCTTTTAAAATTGGGAACCCACGGGTTTTTAAGATTTTCTATACCCATGTTTCCCGAAGCCACACTTTGTGCCACTCCTTTCATTTATACTTTAAGTGCGATTGCTATAATATATACTTCCTTGACCACTTCAAGACAGATCGATCTTAAGAAGATCATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGGTATCTTTAGTCGGGCGGCGGCCGGAATTGGAGGTAGCATTCTACCGATGTTAAGTCATGGGCTGGTTCCTTCAGCCCTTTTTCTATGTGTTGGGGTTCTATATGACCGACATAAGACTCGACTTGTTAGATATTACGGAGGTTCA

Coding sequence (CDS)

ATGAGATTCTTGCCGAATCCGAGTGCTTCTGTTGCGTATAATGTCAATCTCGTAGCGGATCAATTCCAACGAGCCTTTCAAACTAGTACTTTTTGTAATCGACTCTATAGCTTCTTCAATAAACGCTGGTTCTTCGATCAAGTTTTGAATGACTTTCTAGTCAGATCGTTCCTGCGTTTCGGATATTCAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCCCTATGGTATCTCGTACACATTCCGACGATTGGCCGAGCGAATCAGTCAACTTCAAACTATTCTGTTGATTCTTCTCCAAACAGGAACCACCGATTTACAAATCTCATTAACCACTGAATTTAGTGAGCGGCGCCAAATCTTTCTATGGATTGCTTCTTTCGCCTCTTTCGCCGTCAAAGTGCCTATGGTACCAGTTCATATTTGGTTACCCGAAGCTCATGTAGAGGCACCTACGGCAGGATCCGTCATCTTGGCAGGAATTCTTTTAAAATTGGGAACCCACGGGTTTTTAAGATTTTCTATACCCATGTTTCCCGAAGCCACACTTTGTGCCACTCCTTTCATTTATACTTTAAGTGCGATTGCTATAATATATACTTCCTTGACCACTTCAAGACAGATCGATCTTAAGAAGATCATTGCTTACTCCTCAGTAGCCCATATGAATCTGGTGACTATTGGTATCTTTAGTCGGGCGGCGGCCGGAATTGGAGGTAGCATTCTACCGATGTTAAGTCATGGGCTGGTTCCTTCAGCCCTTTTTCTATGTGTTGGGGTTCTATATGACCGACATAAGACTCGACTTGTTAGATATTACGGAGGTTCA

Protein sequence

MRFLPNPSASVAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEALDKGAIEILGPYGISYTFRRLAERISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGVLYDRHKTRLVRYYGGS
Homology
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BLAST of CmaCh11G012310 vs. Swiss-Prot
Match: NU4M_BRACM (NADH-ubiquinone oxidoreductase chain 4 OS=Brassica campestris GN=ND4 PE=3 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 4.8e-90
Identity = 188/257 (73.15%), Postives = 201/257 (78.21%), Query Frame = 1 

Query: 42  RWFFDQVLNDFLVRSFLRFG---------YSVSFEALDKGAIEILGPYG-------ISYT 101
           R +  + +  FL+R FL            + V  E++      I+G +G        +Y 
Sbjct: 113 RSYGKEYITAFLIREFLMIAVFRMLDLLLFYVFPESVPIPMFIIIGVWGSRQRKIKAAYQ 172

Query: 102 F--RRLAERISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVP 161
           F    L   +  L  ILLIL QTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVP
Sbjct: 173 FFLYTLLGSLFMLLAILLILFQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVP 232

Query: 162 VHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAII 221
           VHIWLPEAHVEAPTAGSVILAGI LK GTHGFLRFSIPMFPEATLC+TPFIYTLSAIAII
Sbjct: 233 VHIWLPEAHVEAPTAGSVILAGIPLKFGTHGFLRFSIPMFPEATLCSTPFIYTLSAIAII 292

Query: 222 YTSLTTSRQIDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCV 281
           YTSLTTSRQIDLKKIIAYSSVAHMNLVTIG+FS    GIGGSILPMLSHGLVPSALFLCV
Sbjct: 293 YTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCV 352

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BLAST of CmaCh11G012310 vs. Swiss-Prot
Match: NU4M_WHEAT (NADH-ubiquinone oxidoreductase chain 4 OS=Triticum aestivum GN=ND4 PE=2 SV=2)

HSP 1 Score: 318.2 bits (814), Expect = 9.3e-86
Identity = 186/264 (70.45%), Postives = 199/264 (75.38%), Query Frame = 1 

Query: 35  LYSFFNKRWFFDQVLNDFLVRSFLRFG---------YSVSFEALDKGAIEILGPYG---- 94
           L  +   R F  + +  FL+  FL            + V FE++      I+G +G    
Sbjct: 106 LVGWSGMRSFGKEYIIAFLICEFLMIAVFCMLDLLLFYVFFESVLIPMFIIIGVWGSRQR 165

Query: 95  ---ISYTF--RRLAERISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFA 154
               +Y F    L   +  L  ILLILLQTGTTDLQI LTTEFSERRQI LWIA FASFA
Sbjct: 166 KIKAAYQFFLYTLLGSVFMLLAILLILLQTGTTDLQILLTTEFSERRQILLWIAFFASFA 225

Query: 155 VKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYT 214
           VKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGT+GFLRFSIPMFPEATLC TPFIYT
Sbjct: 226 VKVPMVPVHIWLPEAHVEAPTAGSVILAGILLKLGTYGFLRFSIPMFPEATLCFTPFIYT 285

Query: 215 LSAIAIIYTSLTTSRQIDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVP 274
           LSAIAIIYTSLTT RQIDLKKIIAYSSVAHMNLVTIG+FS    GIGGSIL MLSHGLV 
Sbjct: 286 LSAIAIIYTSLTTLRQIDLKKIIAYSSVAHMNLVTIGMFSLNIQGIGGSILLMLSHGLVS 345

Query: 275 SALFLCVGVLYDRHKTRLVRYYGG 281
           SALFLCVGVLYDRHKTRLVRYYGG
Sbjct: 346 SALFLCVGVLYDRHKTRLVRYYGG 369

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BLAST of CmaCh11G012310 vs. Swiss-Prot
Match: NU4M_ARATH (NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis thaliana GN=ND4 PE=2 SV=2)

HSP 1 Score: 317.8 bits (813), Expect = 1.2e-85
Identity = 169/185 (91.35%), Postives = 171/185 (92.43%), Query Frame = 1 

Query: 96  LQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEA 155
           L  ILLIL QTGTTDLQI LTTEFSERRQIFLWIA FASFAVKVPMVPVHIWLPEAHVEA
Sbjct: 185 LLAILLILFQTGTTDLQILLTTEFSERRQIFLWIAFFASFAVKVPMVPVHIWLPEAHVEA 244

Query: 156 PTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQIDL 215
           PTAGSVILAGILLK GT+GFLRFSIPMFPEATLC TPFIYTLSAIAIIYTSLTT RQIDL
Sbjct: 245 PTAGSVILAGILLKFGTYGFLRFSIPMFPEATLCFTPFIYTLSAIAIIYTSLTTLRQIDL 304

Query: 216 KKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGVLYDRHKTRLV 275
           KKIIAYSSVAHMNLVTIG+FS    GIGGSIL MLSHGLV SALFLCVGVLYDRHKTRLV
Sbjct: 305 KKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILLMLSHGLVSSALFLCVGVLYDRHKTRLV 364

Query: 276 RYYGG 281
           RYYGG
Sbjct: 365 RYYGG 369

[Close]
BLAST of CmaCh11G012310 vs. Swiss-Prot
Match: NU4M_MARPO (NADH-ubiquinone oxidoreductase chain 4 OS=Marchantia polymorpha GN=ND4 PE=3 SV=2)

HSP 1 Score: 298.9 bits (764), Expect = 5.8e-80
Identity = 159/185 (85.95%), Postives = 164/185 (88.65%), Query Frame = 1 

Query: 96  LQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEA 155
           L  IL I  QTGTTDLQI LTTEFSERRQI LWIA FASF+VKVPMVPVHIWLPEAHVEA
Sbjct: 185 LLAILFIFFQTGTTDLQILLTTEFSERRQILLWIAFFASFSVKVPMVPVHIWLPEAHVEA 244

Query: 156 PTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQIDL 215
           PTAGSVILAGILLKLGT+GFLRFSIPMFPEATL  TPFIYTLS IAIIYTSLTT RQIDL
Sbjct: 245 PTAGSVILAGILLKLGTYGFLRFSIPMFPEATLYFTPFIYTLSVIAIIYTSLTTIRQIDL 304

Query: 216 KKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGVLYDRHKTRLV 275
           KKIIAYSSVAHMN VTIG+FS    GI GSIL MLSHGLV SALFLCVG LYDRHKTR+V
Sbjct: 305 KKIIAYSSVAHMNFVTIGMFSLNIQGIEGSILLMLSHGLVSSALFLCVGALYDRHKTRIV 364

Query: 276 RYYGG 281
           +YYGG
Sbjct: 365 KYYGG 369

[Close]
BLAST of CmaCh11G012310 vs. Swiss-Prot
Match: NU4M_PROWI (NADH-ubiquinone oxidoreductase chain 4 OS=Prototheca wickerhamii GN=ND4 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.3e-71
Identity = 141/188 (75.00%), Postives = 157/188 (83.51%), Query Frame = 1 

Query: 93  ISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH 152
           +  L  ILLI  QTGT D+++   ++FSE RQ  LW+A FASFAVKVPMVPVHIWLPEAH
Sbjct: 213 VLMLLAILLIYFQTGTLDIEMLYLSDFSETRQCILWLAFFASFAVKVPMVPVHIWLPEAH 272

Query: 153 VEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQ 212
           VEAPTAGSVILAGILLKLGT+GFLRFSIP+FP A +  TP IYT+S IAI+YTS TT RQ
Sbjct: 273 VEAPTAGSVILAGILLKLGTYGFLRFSIPLFPYACIYFTPLIYTMSVIAIVYTSCTTIRQ 332

Query: 213 IDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGVLYDRHKT 272
           IDLKKIIAYSSVAHMN VTIG+FS+   GI GSIL M+SHGLV  ALFLCVGVLYDRHKT
Sbjct: 333 IDLKKIIAYSSVAHMNFVTIGLFSQNTQGIEGSILLMISHGLVSPALFLCVGVLYDRHKT 392

Query: 273 RLVRYYGG 281
           RL+RYY G
Sbjct: 393 RLLRYYSG 400

[Close]
BLAST of CmaCh11G012310 vs. TrEMBL
Match: G3EJ06_CUCSA (NADH-ubiquinone oxidoreductase chain 4 OS=Cucumis sativus GN=nad4 PE=3 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 3.3e-90
Identity = 178/189 (94.18%), Postives = 181/189 (95.77%), Query Frame = 1 

Query: 93  ISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH 152
           +  L  ILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH
Sbjct: 182 VFMLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH 241

Query: 153 VEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQ 212
           VEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFIYTLSAIAIIYTSLTTSRQ
Sbjct: 242 VEAPTAGSVILAGILLKLGTHGFLRFSIPIFPEATLCATPFIYTLSAIAIIYTSLTTSRQ 301

Query: 213 IDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGVLYDRHKT 272
           IDLKKIIAYSSVAHMNLVTIG+FS    GIGGSILPMLSHGLVPSALFLCVGVLYDRHKT
Sbjct: 302 IDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCVGVLYDRHKT 361

Query: 273 RLVRYYGGS 282
           RLVRYYGGS
Sbjct: 362 RLVRYYGGS 370

[Close]
BLAST of CmaCh11G012310 vs. TrEMBL
Match: G3EU35_CUCME (NADH-ubiquinone oxidoreductase chain 4 OS=Cucumis melo subsp. melo GN=nad4 PE=3 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 9.6e-90
Identity = 177/189 (93.65%), Postives = 181/189 (95.77%), Query Frame = 1 

Query: 93  ISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH 152
           +  L  ILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH
Sbjct: 182 VLMLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH 241

Query: 153 VEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQ 212
           VEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFIYTLSAIAIIYTSLTTSRQ
Sbjct: 242 VEAPTAGSVILAGILLKLGTHGFLRFSIPIFPEATLCATPFIYTLSAIAIIYTSLTTSRQ 301

Query: 213 IDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGVLYDRHKT 272
           IDLKKIIAYSSVAHMNLVTIG+FS    GIGGSILPMLSHGLVPSALFLCVGVLYDRH+T
Sbjct: 302 IDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCVGVLYDRHQT 361

Query: 273 RLVRYYGGS 282
           RLVRYYGGS
Sbjct: 362 RLVRYYGGS 370

[Close]
BLAST of CmaCh11G012310 vs. TrEMBL
Match: A0A0B4L0D9_FRAVE (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Fragaria vesca subsp. bracteata GN=nad4 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.3e-89
Identity = 188/256 (73.44%), Postives = 204/256 (79.69%), Query Frame = 1 

Query: 39  FNKRWFFDQVLNDFLVRSFLRFGYSVSFEALDKGAIE----ILGPYG-------ISYTF- 98
           + K +    ++ +FL+ +  R    + F  L +  +     I+G +G        +Y F 
Sbjct: 115 YGKEYITASLIREFLMIAVFRMLDPLLFYVLPESVLIPMFIIIGVWGSRQRKIKAAYQFF 174

Query: 99  -RRLAERISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH 158
              L   +  L  ILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH
Sbjct: 175 LYTLLGSVFMLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH 234

Query: 159 IWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYT 218
           IWLPEAHVEAPTAGSVILAGI LKLGTHGFLRFSIPMFPEATLC+TPFIYT SAIAIIYT
Sbjct: 235 IWLPEAHVEAPTAGSVILAGIPLKLGTHGFLRFSIPMFPEATLCSTPFIYTPSAIAIIYT 294

Query: 219 SLTTSRQIDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGV 278
           SLTTSRQIDLKKIIAYSSVAHMNLVTIG+FS    GIGGSILPMLSHGLVPSALFLCVGV
Sbjct: 295 SLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCVGV 354

Query: 279 LYDRHKTRLVRYYGGS 282
           LYDRHKTRLVRYYGGS
Sbjct: 355 LYDRHKTRLVRYYGGS 370

[Close]
BLAST of CmaCh11G012310 vs. TrEMBL
Match: A0A0B4L047_9ROSA (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Fragaria virginiana GN=nad4 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.3e-89
Identity = 188/256 (73.44%), Postives = 204/256 (79.69%), Query Frame = 1 

Query: 39  FNKRWFFDQVLNDFLVRSFLRFGYSVSFEALDKGAIE----ILGPYG-------ISYTF- 98
           + K +    ++ +FL+ +  R    + F  L +  +     I+G +G        +Y F 
Sbjct: 115 YGKEYITASLIREFLMIAVFRMLDPLLFYVLPESVLIPMFIIIGVWGSRQRKIKAAYQFF 174

Query: 99  -RRLAERISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH 158
              L   +  L  ILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH
Sbjct: 175 LYTLLGSVFMLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH 234

Query: 159 IWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYT 218
           IWLPEAHVEAPTAGSVILAGI LKLGTHGFLRFSIPMFPEATLC+TPFIYT SAIAIIYT
Sbjct: 235 IWLPEAHVEAPTAGSVILAGIPLKLGTHGFLRFSIPMFPEATLCSTPFIYTPSAIAIIYT 294

Query: 219 SLTTSRQIDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGV 278
           SLTTSRQIDLKKIIAYSSVAHMNLVTIG+FS    GIGGSILPMLSHGLVPSALFLCVGV
Sbjct: 295 SLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCVGV 354

Query: 279 LYDRHKTRLVRYYGGS 282
           LYDRHKTRLVRYYGGS
Sbjct: 355 LYDRHKTRLVRYYGGS 370

[Close]
BLAST of CmaCh11G012310 vs. TrEMBL
Match: A0A0F6T740_9ROSA (NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Fragaria virginiana GN=nad4 PE=3 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 6.3e-89
Identity = 188/256 (73.44%), Postives = 204/256 (79.69%), Query Frame = 1 

Query: 39  FNKRWFFDQVLNDFLVRSFLRFGYSVSFEALDKGAIE----ILGPYG-------ISYTF- 98
           + K +    ++ +FL+ +  R    + F  L +  +     I+G +G        +Y F 
Sbjct: 115 YGKEYITASLIREFLMIAVFRMLDPLLFYVLPESVLIPMFIIIGVWGSRQRKIKAAYQFF 174

Query: 99  -RRLAERISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH 158
              L   +  L  ILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH
Sbjct: 175 LYTLLGSVFMLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH 234

Query: 159 IWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYT 218
           IWLPEAHVEAPTAGSVILAGI LKLGTHGFLRFSIPMFPEATLC+TPFIYT SAIAIIYT
Sbjct: 235 IWLPEAHVEAPTAGSVILAGIPLKLGTHGFLRFSIPMFPEATLCSTPFIYTPSAIAIIYT 294

Query: 219 SLTTSRQIDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGV 278
           SLTTSRQIDLKKIIAYSSVAHMNLVTIG+FS    GIGGSILPMLSHGLVPSALFLCVGV
Sbjct: 295 SLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCVGV 354

Query: 279 LYDRHKTRLVRYYGGS 282
           LYDRHKTRLVRYYGGS
Sbjct: 355 LYDRHKTRLVRYYGGS 370

[Close]
BLAST of CmaCh11G012310 vs. TAIR10
Match: ATMG00580.1 (ATMG00580.1 NADH dehydrogenase subunit 4)

HSP 1 Score: 332.4 bits (851), Expect = 2.7e-91
Identity = 188/257 (73.15%), Postives = 201/257 (78.21%), Query Frame = 1 

Query: 42  RWFFDQVLNDFLVRSFLRFG---------YSVSFEALDKGAIEILGPYG-------ISYT 101
           R +  + +  FL+R FL            + V  E++      I+G +G        +Y 
Sbjct: 113 RSYGKEYITAFLIREFLMIAVFRMLDLLLFYVFPESVPIPMFIIIGVWGSRQRKIKAAYQ 172

Query: 102 F--RRLAERISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVP 161
           F    L   +  L  ILLIL QTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVP
Sbjct: 173 FFLYTLLGSLFMLLAILLILFQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVP 232

Query: 162 VHIWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAII 221
           VHIWLPEAHVEAPTAGSVILAGI LK GTHGFLRFSIPMFPEATLC+TPFIYTLSAIAII
Sbjct: 233 VHIWLPEAHVEAPTAGSVILAGIPLKFGTHGFLRFSIPMFPEATLCSTPFIYTLSAIAII 292

Query: 222 YTSLTTSRQIDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCV 281
           YTSLTTSRQIDLKKIIAYSSVAHMNLVTIG+FS    GIGGSILPMLSHGLVPSALFLCV
Sbjct: 293 YTSLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCV 352

[Close]
BLAST of CmaCh11G012310 vs. TAIR10
Match: ATMG00060.1 (ATMG00060.1 NADH dehydrogenase subunit 5C)

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-43
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 1 

Query: 9   ASVAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 68
           A VAYNVN VADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY VSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGPYGISYTFRRLAERISQLQT 99
           LDKGAIEILGPYGISYTFRRLAERISQLQ+
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQS 618

[Close]
BLAST of CmaCh11G012310 vs. TAIR10
Match: ATMG00513.1 (ATMG00513.1 NADH dehydrogenase 5A)

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-43
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 1 

Query: 9   ASVAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 68
           A VAYNVN VADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY VSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGPYGISYTFRRLAERISQLQT 99
           LDKGAIEILGPYGISYTFRRLAERISQLQ+
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQS 618

[Close]
BLAST of CmaCh11G012310 vs. TAIR10
Match: ATMG00665.1 (ATMG00665.1 NADH dehydrogenase 5B)

HSP 1 Score: 173.7 bits (439), Expect = 1.6e-43
Identity = 86/90 (95.56%), Postives = 87/90 (96.67%), Query Frame = 1 

Query: 9   ASVAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 68
           A VAYNVN VADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGY VSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGPYGISYTFRRLAERISQLQT 99
           LDKGAIEILGPYGISYTFRRLAERISQLQ+
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQS 618

[Close]
BLAST of CmaCh11G012310 vs. TAIR10
Match: ATCG01050.1 (ATCG01050.1 NADH-Ubiquinone/plastoquinone (complex I) protein)

HSP 1 Score: 125.9 bits (315), Expect = 3.8e-29
Identity = 67/173 (38.73%), Postives = 104/173 (60.12%), Query Frame = 1 

Query: 108 TTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAHVEAPTAGSVILAGIL 167
           T +L++     +    +I  +I    +FAVK P++P+H WLP+ H EA  +  ++LAGIL
Sbjct: 200 TLNLELLANKSYPVTLEILFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGIL 259

Query: 168 LKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQIDLKKIIAYSSVAHM 227
           LK+G +G +R ++ + P A    +P++  +  I IIY + T+  Q +LKK IAYSSV+HM
Sbjct: 260 LKMGAYGLVRINMELLPHAHSMFSPWLLVVGTIQIIYAASTSPGQRNLKKRIAYSSVSHM 319

Query: 228 NLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGVLYDRHKTRLVRYYGG 281
             + IGI S    G+ G+IL ++SHG + +ALF   G  YDR +   +   GG
Sbjct: 320 GFIIIGISSITDPGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGG 372

[Close]
BLAST of CmaCh11G012310 vs. NCBI nr
Match: gi|346683393|ref|YP_004849354.1| (NADH dehydrogenase subunit 4 [Cucumis sativus])

HSP 1 Score: 339.7 bits (870), Expect = 4.8e-90
Identity = 178/189 (94.18%), Postives = 181/189 (95.77%), Query Frame = 1 

Query: 93  ISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH 152
           +  L  ILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH
Sbjct: 182 VFMLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH 241

Query: 153 VEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQ 212
           VEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFIYTLSAIAIIYTSLTTSRQ
Sbjct: 242 VEAPTAGSVILAGILLKLGTHGFLRFSIPIFPEATLCATPFIYTLSAIAIIYTSLTTSRQ 301

Query: 213 IDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGVLYDRHKT 272
           IDLKKIIAYSSVAHMNLVTIG+FS    GIGGSILPMLSHGLVPSALFLCVGVLYDRHKT
Sbjct: 302 IDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCVGVLYDRHKT 361

Query: 273 RLVRYYGGS 282
           RLVRYYGGS
Sbjct: 362 RLVRYYGGS 370

[Close]
BLAST of CmaCh11G012310 vs. NCBI nr
Match: gi|345034434|gb|AEN56120.1| (NADH dehydrogenase subunit 4 [Cucumis melo subsp. melo])

HSP 1 Score: 338.2 bits (866), Expect = 1.4e-89
Identity = 177/189 (93.65%), Postives = 181/189 (95.77%), Query Frame = 1 

Query: 93  ISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH 152
           +  L  ILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH
Sbjct: 182 VLMLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVHIWLPEAH 241

Query: 153 VEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYTSLTTSRQ 212
           VEAPTAGSVILAGILLKLGTHGFLRFSIP+FPEATLCATPFIYTLSAIAIIYTSLTTSRQ
Sbjct: 242 VEAPTAGSVILAGILLKLGTHGFLRFSIPIFPEATLCATPFIYTLSAIAIIYTSLTTSRQ 301

Query: 213 IDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGVLYDRHKT 272
           IDLKKIIAYSSVAHMNLVTIG+FS    GIGGSILPMLSHGLVPSALFLCVGVLYDRH+T
Sbjct: 302 IDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCVGVLYDRHQT 361

Query: 273 RLVRYYGGS 282
           RLVRYYGGS
Sbjct: 362 RLVRYYGGS 370

[Close]
BLAST of CmaCh11G012310 vs. NCBI nr
Match: gi|984915109|gb|AMC32976.1| (NADH dehydrogenase subunit 4 (mitochondrion) [Prunus virginiana])

HSP 1 Score: 335.5 bits (859), Expect = 9.0e-89
Identity = 188/256 (73.44%), Postives = 204/256 (79.69%), Query Frame = 1 

Query: 39  FNKRWFFDQVLNDFLVRSFLRFGYSVSFEALDKGAIE----ILGPYG-------ISYTF- 98
           + K +    ++ +FL+ +  R    + F  L +  +     I+G +G        +Y F 
Sbjct: 115 YGKEYITASLIREFLMIAVFRMLDPLLFYVLPESVLIPMFIIIGVWGSRQRKIKAAYQFF 174

Query: 99  -RRLAERISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH 158
              L   +  L  ILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH
Sbjct: 175 LYTLLGSVFMLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH 234

Query: 159 IWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYT 218
           IWLPEAHVEAPTAGSVILAGI LKLGTHGFLRFSIPMFPEATLC+TPFIYT SAIAIIYT
Sbjct: 235 IWLPEAHVEAPTAGSVILAGIPLKLGTHGFLRFSIPMFPEATLCSTPFIYTPSAIAIIYT 294

Query: 219 SLTTSRQIDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGV 278
           SLTTSRQIDLKKIIAYSSVAHMNLVTIG+FS    GIGGSILPMLSHGLVPSALFLCVGV
Sbjct: 295 SLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCVGV 354

Query: 279 LYDRHKTRLVRYYGGS 282
           LYDRHKTRLVRYYGGS
Sbjct: 355 LYDRHKTRLVRYYGGS 370

[Close]
BLAST of CmaCh11G012310 vs. NCBI nr
Match: gi|571034427|gb|AHF22666.1| (NADH dehydrogenase subunit 4, partial (mitochondrion) [Fragaria iinumae])

HSP 1 Score: 335.5 bits (859), Expect = 9.0e-89
Identity = 188/256 (73.44%), Postives = 204/256 (79.69%), Query Frame = 1 

Query: 39  FNKRWFFDQVLNDFLVRSFLRFGYSVSFEALDKGAIE----ILGPYG-------ISYTF- 98
           + K +    ++ +FL+ +  R    + F  L +  +     I+G +G        +Y F 
Sbjct: 115 YGKEYITASLIREFLMIAVFRMLDPLLFYVLPESVLIPMFIIIGVWGSRQRKIKAAYQFF 174

Query: 99  -RRLAERISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH 158
              L   +  L  ILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH
Sbjct: 175 LYTLLGSVFMLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH 234

Query: 159 IWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYT 218
           IWLPEAHVEAPTAGSVILAGI LKLGTHGFLRFSIPMFPEATLC+TPFIYT SAIAIIYT
Sbjct: 235 IWLPEAHVEAPTAGSVILAGIPLKLGTHGFLRFSIPMFPEATLCSTPFIYTPSAIAIIYT 294

Query: 219 SLTTSRQIDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGV 278
           SLTTSRQIDLKKIIAYSSVAHMNLVTIG+FS    GIGGSILPMLSHGLVPSALFLCVGV
Sbjct: 295 SLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCVGV 354

Query: 279 LYDRHKTRLVRYYGGS 282
           LYDRHKTRLVRYYGGS
Sbjct: 355 LYDRHKTRLVRYYGGS 370

[Close]
BLAST of CmaCh11G012310 vs. NCBI nr
Match: gi|814607003|gb|AKE34017.1| (NADH dehydrogenase subunit 4, partial (mitochondrion) [Fragaria vesca subsp. bracteata])

HSP 1 Score: 335.5 bits (859), Expect = 9.0e-89
Identity = 188/256 (73.44%), Postives = 204/256 (79.69%), Query Frame = 1 

Query: 39  FNKRWFFDQVLNDFLVRSFLRFGYSVSFEALDKGAIE----ILGPYG-------ISYTF- 98
           + K +    ++ +FL+ +  R    + F  L +  +     I+G +G        +Y F 
Sbjct: 115 YGKEYITASLIREFLMIAVFRMLDPLLFYVLPESVLIPMFIIIGVWGSRQRKIKAAYQFF 174

Query: 99  -RRLAERISQLQTILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH 158
              L   +  L  ILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH
Sbjct: 175 LYTLLGSVFMLLAILLILLQTGTTDLQISLTTEFSERRQIFLWIASFASFAVKVPMVPVH 234

Query: 159 IWLPEAHVEAPTAGSVILAGILLKLGTHGFLRFSIPMFPEATLCATPFIYTLSAIAIIYT 218
           IWLPEAHVEAPTAGSVILAGI LKLGTHGFLRFSIPMFPEATLC+TPFIYT SAIAIIYT
Sbjct: 235 IWLPEAHVEAPTAGSVILAGIPLKLGTHGFLRFSIPMFPEATLCSTPFIYTPSAIAIIYT 294

Query: 219 SLTTSRQIDLKKIIAYSSVAHMNLVTIGIFSRAAAGIGGSILPMLSHGLVPSALFLCVGV 278
           SLTTSRQIDLKKIIAYSSVAHMNLVTIG+FS    GIGGSILPMLSHGLVPSALFLCVGV
Sbjct: 295 SLTTSRQIDLKKIIAYSSVAHMNLVTIGMFSPNIQGIGGSILPMLSHGLVPSALFLCVGV 354

Query: 279 LYDRHKTRLVRYYGGS 282
           LYDRHKTRLVRYYGGS
Sbjct: 355 LYDRHKTRLVRYYGGS 370

The following BLAST results are available for this feature:
BLAST of CmaCh11G012310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NU4M_BRACM4.8e-9073.15NADH-ubiquinone oxidoreductase chain 4 OS=Brassica campestris GN=ND4 PE=3 SV=1[more]
NU4M_WHEAT9.3e-8670.45NADH-ubiquinone oxidoreductase chain 4 OS=Triticum aestivum GN=ND4 PE=2 SV=2[more]
NU4M_ARATH1.2e-8591.35NADH-ubiquinone oxidoreductase chain 4 OS=Arabidopsis thaliana GN=ND4 PE=2 SV=2[more]
NU4M_MARPO5.8e-8085.95NADH-ubiquinone oxidoreductase chain 4 OS=Marchantia polymorpha GN=ND4 PE=3 SV=2[more]
NU4M_PROWI1.3e-7175.00NADH-ubiquinone oxidoreductase chain 4 OS=Prototheca wickerhamii GN=ND4 PE=3 SV=... [more]
BLAST of CmaCh11G012310 vs. TrEMBL
Match NameE-valueIdentityDescription
G3EJ06_CUCSA3.3e-9094.18NADH-ubiquinone oxidoreductase chain 4 OS=Cucumis sativus GN=nad4 PE=3 SV=1[more]
G3EU35_CUCME9.6e-9093.65NADH-ubiquinone oxidoreductase chain 4 OS=Cucumis melo subsp. melo GN=nad4 PE=3 ... [more]
A0A0B4L0D9_FRAVE6.3e-8973.44NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Fragaria vesca subsp. bract... [more]
A0A0B4L047_9ROSA6.3e-8973.44NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Fragaria virginiana GN=nad4... [more]
A0A0F6T740_9ROSA6.3e-8973.44NADH-ubiquinone oxidoreductase chain 4 (Fragment) OS=Fragaria virginiana GN=nad4... [more]
BLAST of CmaCh11G012310 vs. TAIR10
Match NameE-valueIdentityDescription
ATMG00580.12.7e-9173.15ATMG00580.1 NADH dehydrogenase subunit 4[more]
ATMG00060.11.6e-4395.56ATMG00060.1 NADH dehydrogenase subunit 5C[more]
ATMG00513.11.6e-4395.56ATMG00513.1 NADH dehydrogenase 5A[more]
ATMG00665.11.6e-4395.56ATMG00665.1 NADH dehydrogenase 5B[more]
ATCG01050.13.8e-2938.73ATCG01050.1 NADH-Ubiquinone/plastoquinone (complex I) protein[more]
BLAST of CmaCh11G012310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|346683393|ref|YP_004849354.1|4.8e-9094.18NADH dehydrogenase subunit 4 [Cucumis sativus][more]
gi|345034434|gb|AEN56120.1|1.4e-8993.65NADH dehydrogenase subunit 4 [Cucumis melo subsp. melo][more]
gi|984915109|gb|AMC32976.1|9.0e-8973.44NADH dehydrogenase subunit 4 (mitochondrion) [Prunus virginiana][more]
gi|571034427|gb|AHF22666.1|9.0e-8973.44NADH dehydrogenase subunit 4, partial (mitochondrion) [Fragaria iinumae][more]
gi|814607003|gb|AKE34017.1|9.0e-8973.44NADH dehydrogenase subunit 4, partial (mitochondrion) [Fragaria vesca subsp. bra... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001750ND/Mrp_mem
IPR003918NADH_UbQ_OxRdtase
IPR010934NADH_DH_su5_C
Vocabulary: Molecular Function
TermDefinition
GO:0008137NADH dehydrogenase (ubiquinone) activity
Vocabulary: Biological Process
TermDefinition
GO:0042773ATP synthesis coupled electron transport
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0015992 proton transport
biological_process GO:0006814 sodium ion transport
biological_process GO:0006744 ubiquinone biosynthetic process
biological_process GO:0042773 ATP synthesis coupled electron transport
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0031966 mitochondrial membrane
cellular_component GO:0070469 respiratory chain
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G012310.1CmaCh11G012310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001750NADH:quinone oxidoreductase/Mrp antiporter, membrane subunitPFAMPF00361Proton_antipo_Mcoord: 96..280
score: 1.6
IPR003918NADH:ubiquinone oxidoreductasePRINTSPR01437NUOXDRDTASE4coord: 84..108
score: 2.8E-21coord: 153..177
score: 2.8E-21coord: 241..260
score: 2.8
IPR010934NADH dehydrogenase subunit 5, C-terminalPFAMPF06455NADH5_Ccoord: 29..100
score: 1.
NoneNo IPR availablePANTHERPTHR22773NADH DEHYDROGENASEcoord: 96..280
score: 6.2E
NoneNo IPR availablePANTHERPTHR22773:SF88NADH-UBIQUINONE OXIDOREDUCTASE CHAIN 4coord: 96..280
score: 6.2E

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh11G012310Cucurbita maxima (Rimu)cmacmaB085
CmaCh11G012310Cucumber (Gy14) v1cgycmaB0055
CmaCh11G012310Cucurbita moschata (Rifu)cmacmoB115
CmaCh11G012310Wild cucumber (PI 183967)cmacpiB105
CmaCh11G012310Cucumber (Chinese Long) v2cmacuB106
CmaCh11G012310Melon (DHL92) v3.5.1cmameB108
CmaCh11G012310Watermelon (Charleston Gray)cmawcgB114
CmaCh11G012310Watermelon (97103) v1cmawmB101
CmaCh11G012310Cucurbita pepo (Zucchini)cmacpeB150
CmaCh11G012310Bottle gourd (USVL1VR-Ls)cmalsiB133
CmaCh11G012310Bottle gourd (USVL1VR-Ls)cmalsiB142
CmaCh11G012310Melon (DHL92) v3.6.1cmamedB116
CmaCh11G012310Cucumber (Chinese Long) v3cmacucB0120
CmaCh11G012310Watermelon (97103) v2cmawmbB117
CmaCh11G012310Wax gourdcmawgoB0171