CmaCh11G012200 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G012200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	structural constituent of ribosome;protein binding
Location	Cma_Chr11 : 7742064 .. 7746737 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGGGGCAGTCAGCTGGCTGCTTCTTGGTCACGCCCCCCCGCAACTAGATACGAGATACTTGATCTAAATTCTCAAATAGGAAATTGCATACCATTCGTCAATATATGTATAGAAACATGGGTACATGATATAGAATGTCATCCAGGTCAAAGCGCAAAGCTGGCTCGAGCCGCAGGAACTTTTGCTAAAATAATGAAGCAACCTGCACCCCCTACACTCTCTCTTAGGCTTGTGCGGCTACCTTCGGGTGTTCAAAACTCATTGATGGAGCTGAGCTACTAAAGGAGGTAGACCTTCGGTGTCACCTTGAGGGAAGCCCACCGAAGCGGGATTTTGGGTAGGGGCGGAATCGAAGCGAAGATATTTTGAGTTCATGCCACGACGATCTATATGGAAGGGCAGTTTTGTTGATGCAATCCTGTTGAGAATGAAGAAGAAGAGAGATCCTCTTTTGAACAGGAAAATTTGGTCACGTAGATCTTCGATTTTTCCGGAATTCGTTGATAGCTCCATACGAATTTACAATGAAAAAACTTATATTCGTTGTAAGATCACTGAAGGAAGGGTTGGTCATAAATTTGGAGAGTTTGCTTCGACACGGAAACGAGACTTTCGAGAACAAATATTGGACCGAGAAATAAAAGGGGAGAAAGTCAAGTCTAAGCGCATATGGCACGAAAAGGAAATCCGATTTCGGTAAGACTTGATCTGAATCGTAGTTCAGATTCAAGTCGGTTCAGTGAGGGCGACCGCGAAAGTCATCGAATGGGTCAGACTTTTCCTTCAGTTTGTCCTATATTGAAAATAAAAAAAAAAAGCTTGGGAGGACATTGCAGATGTCCAGGATGAACACGACTTCTTCTAACACTAGAAGACCACTGGAAGACACTCGGGACCAGAGCATGTCGTGAAAGAAGCACACTGGTCTTGCTTCGACCGTGTCTTCGGGGCACTATTGAATGTAGATATCATGAATGCGAGGTGCAGGATACCAGGCTGAGAAACCTGGGCAACCACTCCCCTATGTGTTGATCGCTAGCGCATCTAGGGCCCCAGCGCCCAGCGAAGATGGAGAGGCCTAGCCTGATCTGAGAAGTGCTAATTCGGTTTGTCTCGACTTCATTCAAGAACACCGCCCCTGGAATCAATAAGAAAACAAGTGCTAAGTTTCAGATCAGTGAATAAACCAAAACGAAAGAAGAGACCTTTCTCGCTCGGTGCCTAAAGCGCACTATGCTCCCCTTCAACAAATGAGAGTTTTCGGTGGAACCGGTGAACCACGCGAGCAGGCAGGTTAGATGCGTGGGACAGAGGGCTCGTAGTACCTGCTAGCGCAGCTATGCAGTGGAAGGGAAGGAGCCTAAATCGACCCCCTTTTTTCTTTGATAAAAAAACAGTACAAAGAGATTAGACTCTCGGATGAGACTAAGCAGCCACCGACCGTTCCGACCCGCCCCTGACCTATCTTGATTAAGACCAAACAAACAAAACCTATAAAAAATGGAGCCTAGTTTAAGCTGTCAAACAAATAAATGAGAGAATGGAAAATGATGAATATCCACTAGTAGGGATGTATATAGATGGAGTCTCTCTCAGTAAAGAGAGTTGTAGATTCGTAGGAAAGGAGAGGAGTGAAGCTGCTTTACCGAGGGGAGAAGAGCCTTGAGAAACTATTAGTAAAGCACTAGCGCGCCCCTGCCATCTTTTTAAAGCAACAAGCGAGAAAGTTGCCCCTTTTTCAATAACAAAAAAGGAAAGAAAGAAAGAAGAAGGGCCAGCCAACTATCAGAATTCTAGTAAAGGCACCTTAGCCTATCTCTCGATATAGTCAGGGGCCTTTTCTTGCTCGTTAGCGCTCCCTTCCTTACCCCTCTATAAAAGGTTTTGCATAAAGGTAGCTTGTCTACGCCTTTTGAAAACCTGACTCTGACTACTAATAATAATGAAGGGGCTTCTTTCTTCAAATATCCTATAAATAAAGTTAGGGTTGAAAAGCTTTGAGTTTAGGGCAGGTTTGGAACCCTATACAAGGGGCTTTTCCTTTTAAATGACACCTCTTCCTGTGCGAGGGTGTTGCACGAAACCAAACCGCTCCCCCGCCCGATCAAGTACCTGTTGCTTTGTTGGTAGGCCTACTTAGGTTAGGGGGCATTGTCCCTCAGTTCTTACCAACCTCCGGTGTGTAATCGACATGTTGCTAGCTTCAACTCGGTGGAATAGGAATCATTGATTCCCTTGTCTATTTCTTATTCATGCAGAGCGTTCAGCCGGTGCGTGCTCTTTTCTCAAACCAGAACAACTCTGAACATTAGGGAAGATAAGGGAAGACCACCTGAGCGAACCGACCGAAGGGACTTGACTTATTCGAACCGAAGGATAGCGGCTTCAAACTCAGCCTATCACGAGTAGCCTCGCTGCTTGATTGGCAGGGAGGAGCCTCTCAAAAAGGATCAAGCGCTTTGACTTTGTCTCCCGGGGGGATCCACCACAGGTTGGGTTTGAGAGCCGTGTGATGGGTGACTATCTAGCACGGTTCAGAGAGCAAGCACTTTTAGTCTGCATTGGTGAGTAGAAGCCCCCCCTATCAAGACAAGCAAGAAAGAAGCGGCTCTTCCCATGGCGGAGTCGCCATTGACTCTATTTATTATTATGTTAAATCACTGTATCAAGGTGTCAATCTGAAATCTTATTTCGGTTCGATACGTCCACCTACGAGACTGCCCTTTGGCTTTCGTCTTGGTAGGTGTATTATTTTACATTTTCCCAAAATCACATCCATTCATTTCTTTCTTCCTCGTCGACCACGATGACTAAAACGACGCGCATAATCCAAACCCGAAAAGGATCAGGGCCAGTGGTGGGCATTTGGGAAAGTCGAGCCAATCGGGTGTCTTCATTCAAGCGACGATATAGAAAAAGAACGAAACGAAGTGAGAGGCCGGGGGGCAGAGAAAAGAGTGGAGTCGATTAGGCTCGACGACCGAGAAAAGAAAAACGAAGTGAGGATTTGGCCGAAAAAGAAGGAACACTATGGATACCATGACCGATCACCATCGAGAAAGAGGAATCTTTCTAAATCACTTCGCGTCAGCGGGGCCTTCAAGCATCCGAAATATGCCGGAGTTGTAAATGACATAGTGTTCCTGATAAAAAATGACGACTCTTTCAGAAAAATGAAGTTATTCAAGTTCTTTTTCCCAAATCAGTCCCGCTCTGACGACCTGACGAGTCATCTACTTAAAAGAACCCTCCCCGAAGTGCGCCCCTCCTTGAATTATTCGGTCATGCAATACTTATTGAATACAAAGAATAAAATGCATTTCGACCCCATCGTAGTTCTCAATCATTTAGTGGCACCGGGCGTGGCTGAACCATCTACGATGGGGGGAGCGAATACACAGGGAAGAAGCTTAGATAAGAGAATACGTTCTCGCATCGCTTTTTTTGTAGAAAGCTCGACGAACGAGAAAAAGTGTTTGACCGAACCCAAAAGGAGGTTGACCCACTTCATTCGCCAAGCAAATGATCTTCGTTTTGCGGGAACAACAAAAACAACCATCTCGCTCTTTCCTTTCTTTGGTGCTACCTTTTTCTTTCCAAGGGATGGGGTTGGGATGTATAAAAACCTTTTTTTTTAAGGATACCCGGGAACAACTCCTTGGTCAATTAAGGATTAAATGTTGGAACCTCATGGGTAAGGATAAGGTAATAGAATTGATAGAGAAATTCATAGACCTAGGTGGGATAGGAGAATTGATAAAGGGAATAGAGATGATGATAGAGATCATACTGAGAAACAGAAGAATTTTGTATGGGTACAACTCTTATTTGAACGAAGTGCAAAAAATGTGATCTTTGTTGTCTAATAGAACAAAGACTAATACCTTAATTGAGTCAGTCAAGATCAAATCTGTTTATCAAAGTGTTTATCCGATTGCTCAAGACATCTCTTTTCAACTGAGAAACAAAACAAGATCATTTCGTTCCATTTTGACTAAAATAGTGAAGGATATTCCATTAGTAATGAAAAAAAGGGGTTGAGGGGATCCGTATATGTTGTTCAGGTCGATCAGAAGGCATGGAAATAGCTAGAACTGAATGCGGAAAGTATGGAAAAACATCTCATAATGTATTTAACCAGAAAATTGATTATGCTCCTGCGGAAGTATCTACTCGTTACGGAATCTTAGGTGTCAAAATGTGGATTTCATATAAAAAACCAAAAAAAGGAACGTGTTATATCCGAAACGTACAAAATATAGTAAATCTCGTAAAGGCAGATGTTGTAGGGATTGCAAACCGGACGGTACACAACTTGGTTTTGGAAGATATGGCACTCAAAGTTGTAGAGTTGGTCGTCTTTCATTTCGAGCCATTGAAGCAGTGCATAGGGCTATAATCGGACAATTCCGTCGTGCTATGAACGGACAATTCCGAAGAAATTGTCAAATATGGGTCAGAGTTCTCGCGGATCTCCCTATTACCAGGAAACCTACAGAAGTCAGAATGGGAAGAGGAAAAGGAAATCCTACGGGTTGGATTGCTCATGTGTCCACGGGACAAATCCCATTTGAAATAGATGGTGTGAGTTTGTCAAATGCTCGACAAGCCGCTACATTAGCGGCGCATAAACCATGTTCATCAACCAAGTTTGTTCAGTGGTCATAA

mRNA sequence

ATGGAAGGGGGCAGTCAGCTGGCTGCTTCTTGGTCACGCCCCCCCGCAACTAGATACGAGATACTTGATCTAAATTCTCAAATAGGAAATTGCATACCATTCGTCAATATATGTATAGAAACATGGGTACATGATATAGAATGTCATCCAGGTCAAAGCGCAAAGCTGGCTCGAGCCGCAGGAACTTTTGCTAAAATAATGAAGCAACCTGCACCCCCTACACTCTCTCTTAGGCTTGTGCGGCTACCTTCGGGTGTCAATCTGAAATCTTATTTCGGTTCGATACGTCCACCTACGAGACTGCCCTTTGGCTTTCGTCTTGTGAGAGGCCGGGGGGCAGAGAAAAGAGTGGAGTCGATTAGGCTCGACGACCGAGAAAAGAAAAACGAAGTGAGGATTTGGCCGAAAAAGAAGGAACACTATGGATACCATGACCGATCACCATCGAGAAAGAGGAATCTTTCTAAATCACTTCGCGTCAGCGGGGCCTTCAAGCATCCGAAATATGCCGGAGTTGTAAATGACATAGTGTTCCTGATAAAAAATGACGACTCTTTCAGAAAAATGAAGTTATTCAAGTTCTTTTTCCCAAATCAGTCCCGCTCTGACGACCTGACGAGTCATCTACTTAAAAGAACCCTCCCCGAAGTGCGCCCCTCCTTGAATTATTCGGTCATGCAATACTTATTGAATACAAAGAATAAAATGCATTTCGACCCCATCGTAGTTCTCAATCATTTAGTGGCACCGGGCGTGGCTGAACCATCTACGATGGGGGGAGCGAATACACAGGGAAGAAGCTTAGATAAGAGAATACGTTCTCGCATCGCTTTTTTTGTAGAAAGCTCGACGAACGAGAAAAAGTGTTTGACCGAACCCAAAAGGAGGTTGACCCACTTCATTCGCCAAGCAAATGATCTTCGTTTTGCGGGAACAACAAAAACAACCATCTCGCTCTTTCCTTTCTTTGGTGCTACCTTTTTCTTTCCAAGGGATGGGGATACCCGGGAACAACTCCTTGGTCAATTAAGGATTAAATGTTGGAACCTCATGGGTAAGGATAAGGTAATAGAATTGATAGAGAAATTCATAGACCTAGGTGGGATAGGAGAATTGATAAAGGGAATAGAGATGATGATAGAGATCATACTGAGAAACAGAAGAATTTTGTATGGGTACAACTCTTATTTGAACGAAGTGCAAAAAATAACAAAGACTAATACCTTAATTGAGTCAGTCAAGATCAAATCTGTTTATCAAAGTGTTTATCCGATTGCTCAAGACATCTCTTTTCAACTGAGAAACAAAACAAGATCATTTCGTTCCATTTTGACTAAAATAGTGAAGGATATTCCATTAGTAATGAAAAAAAGGGGTCGATCAGAAGGCATGGAAATAGCTAGAACTGAATGCGGAAAGTATGGAAAAACATCTCATAATGTATTTAACCAGAAAATTGATTATGCTCCTGCGGAAGTATCTACTCGTTACGGAATCTTAGGTGTCAAAATGTGGATTTCATATAAAAAACCAAAAAAAGGAACATGTTGTAGGGATTGCAAACCGGACGGTACACAACTTGGTTTTGGAAGATATGGCACTCAAAGTTGTAGAGTTGGTCGTCTTTCATTTCGAGCCATTGAAGCAGTGCATAGGGCTATAATCGGACAATTCCGTCGTGCTATGAACGGACAATTCCGAAGAAATTGTCAAATATGGGTCAGAGTTCTCGCGGATCTCCCTATTACCAGGAAACCTACAGAAGTCAGAATGGGAAGAGGAAAAGGAAATCCTACGGGTTGGATTGCTCATGTGTCCACGGGACAAATCCCATTTGAAATAGATGGTGTGAGTTTGTCAAATGCTCGACAAGCCGCTACATTAGCGGCGCATAAACCATGTTCATCAACCAAGTTTGTTCAGTGGTCATAA

Coding sequence (CDS)

ATGGAAGGGGGCAGTCAGCTGGCTGCTTCTTGGTCACGCCCCCCCGCAACTAGATACGAGATACTTGATCTAAATTCTCAAATAGGAAATTGCATACCATTCGTCAATATATGTATAGAAACATGGGTACATGATATAGAATGTCATCCAGGTCAAAGCGCAAAGCTGGCTCGAGCCGCAGGAACTTTTGCTAAAATAATGAAGCAACCTGCACCCCCTACACTCTCTCTTAGGCTTGTGCGGCTACCTTCGGGTGTCAATCTGAAATCTTATTTCGGTTCGATACGTCCACCTACGAGACTGCCCTTTGGCTTTCGTCTTGTGAGAGGCCGGGGGGCAGAGAAAAGAGTGGAGTCGATTAGGCTCGACGACCGAGAAAAGAAAAACGAAGTGAGGATTTGGCCGAAAAAGAAGGAACACTATGGATACCATGACCGATCACCATCGAGAAAGAGGAATCTTTCTAAATCACTTCGCGTCAGCGGGGCCTTCAAGCATCCGAAATATGCCGGAGTTGTAAATGACATAGTGTTCCTGATAAAAAATGACGACTCTTTCAGAAAAATGAAGTTATTCAAGTTCTTTTTCCCAAATCAGTCCCGCTCTGACGACCTGACGAGTCATCTACTTAAAAGAACCCTCCCCGAAGTGCGCCCCTCCTTGAATTATTCGGTCATGCAATACTTATTGAATACAAAGAATAAAATGCATTTCGACCCCATCGTAGTTCTCAATCATTTAGTGGCACCGGGCGTGGCTGAACCATCTACGATGGGGGGAGCGAATACACAGGGAAGAAGCTTAGATAAGAGAATACGTTCTCGCATCGCTTTTTTTGTAGAAAGCTCGACGAACGAGAAAAAGTGTTTGACCGAACCCAAAAGGAGGTTGACCCACTTCATTCGCCAAGCAAATGATCTTCGTTTTGCGGGAACAACAAAAACAACCATCTCGCTCTTTCCTTTCTTTGGTGCTACCTTTTTCTTTCCAAGGGATGGGGATACCCGGGAACAACTCCTTGGTCAATTAAGGATTAAATGTTGGAACCTCATGGGTAAGGATAAGGTAATAGAATTGATAGAGAAATTCATAGACCTAGGTGGGATAGGAGAATTGATAAAGGGAATAGAGATGATGATAGAGATCATACTGAGAAACAGAAGAATTTTGTATGGGTACAACTCTTATTTGAACGAAGTGCAAAAAATAACAAAGACTAATACCTTAATTGAGTCAGTCAAGATCAAATCTGTTTATCAAAGTGTTTATCCGATTGCTCAAGACATCTCTTTTCAACTGAGAAACAAAACAAGATCATTTCGTTCCATTTTGACTAAAATAGTGAAGGATATTCCATTAGTAATGAAAAAAAGGGGTCGATCAGAAGGCATGGAAATAGCTAGAACTGAATGCGGAAAGTATGGAAAAACATCTCATAATGTATTTAACCAGAAAATTGATTATGCTCCTGCGGAAGTATCTACTCGTTACGGAATCTTAGGTGTCAAAATGTGGATTTCATATAAAAAACCAAAAAAAGGAACATGTTGTAGGGATTGCAAACCGGACGGTACACAACTTGGTTTTGGAAGATATGGCACTCAAAGTTGTAGAGTTGGTCGTCTTTCATTTCGAGCCATTGAAGCAGTGCATAGGGCTATAATCGGACAATTCCGTCGTGCTATGAACGGACAATTCCGAAGAAATTGTCAAATATGGGTCAGAGTTCTCGCGGATCTCCCTATTACCAGGAAACCTACAGAAGTCAGAATGGGAAGAGGAAAAGGAAATCCTACGGGTTGGATTGCTCATGTGTCCACGGGACAAATCCCATTTGAAATAGATGGTGTGAGTTTGTCAAATGCTCGACAAGCCGCTACATTAGCGGCGCATAAACCATGTTCATCAACCAAGTTTGTTCAGTGGTCATAA

Protein sequence

MEGGSQLAASWSRPPATRYEILDLNSQIGNCIPFVNICIETWVHDIECHPGQSAKLARAAGTFAKIMKQPAPPTLSLRLVRLPSGVNLKSYFGSIRPPTRLPFGFRLVRGRGAEKRVESIRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHPKYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQYLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTNEKKCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGDTREQLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNSYLNEVQKITKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIVKDIPLVMKKRGRSEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGILGVKMWISYKKPKKGTCCRDCKPDGTQLGFGRYGTQSCRVGRLSFRAIEAVHRAIIGQFRRAMNGQFRRNCQIWVRVLADLPITRKPTEVRMGRGKGNPTGWIAHVSTGQIPFEIDGVSLSNARQAATLAAHKPCSSTKFVQWS

Homology

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BLAST of CmaCh11G012200 vs. Swiss-Prot
Match: RT03_PETHY (Ribosomal protein S3, mitochondrial OS=Petunia hybrida GN=YRPS3 PE=2 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 8.1e-194
Identity = 353/433 (81.52%), Postives = 372/433 (85.91%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHP 167
           VRGRGA KRVESIRLDDREK+NE+RIWPKKK+ YGYHDRSPS K+NLSKSLRVSGAFKHP
Sbjct: 121 VRGRGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKHP 180

Query: 168 KYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQ 227
           KYAG+ NDI FLI+NDDSFRK  LFKFFFP +SRSD  TSHLLKRTLP VRPSLNYSVMQ
Sbjct: 181 KYAGIENDIAFLIENDDSFRKTNLFKFFFPKKSRSDRPTSHLLKRTLPAVRPSLNYSVMQ 240

Query: 228 YLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTNEK 287
           YLLNTKNK+HFDP+VVLNH VAPGVAEPSTMGGAN QGRSLDKRI S IAFFVE+ST+EK
Sbjct: 241 YLLNTKNKIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIASCIAFFVENSTSEK 300

Query: 288 KCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG----------DTRE 347
           KCL E K+R+THFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG          D RE
Sbjct: 301 KCLAEAKKRVTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDARE 360

Query: 348 QLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNSYL 407
           QLLGQLR KCWNLMGKDKV+ELIEKFIDL  IGELI+GIEMMIEIILRNRRI YGYN YL
Sbjct: 361 QLLGQLRRKCWNLMGKDKVMELIEKFIDLNRIGELIRGIEMMIEIILRNRRIPYGYNYYL 420

Query: 408 NEVQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIVKD 467
           NEV+K+       T TNTLIESVKIKSVYQS  PIAQDISFQ RNKTRSFRSI +KIVKD
Sbjct: 421 NEVKKMRSLLYNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKD 480

Query: 468 IPLVMKK---------RGRSEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGILG 515
           IPLVMKK          GR EG EIARTECGKYGKTS NVFNQKIDYAPAEVSTRYGI G
Sbjct: 481 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 540

[Close]

BLAST of CmaCh11G012200 vs. Swiss-Prot
Match: RT03_OENBE (Ribosomal protein S3, mitochondrial OS=Oenothera berteroana GN=RPS3 PE=3 SV=2)

HSP 1 Score: 664.1 bits (1712), Expect = 1.6e-189
Identity = 347/429 (80.89%), Postives = 368/429 (85.78%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHP 167
           V GRGA KRVESIRLDDREK+NE+RIWPKKK+ YGYHDRSPS K+NLSKSLRVSGAFKHP
Sbjct: 122 VGGRGAGKRVESIRLDDREKQNEIRIWPKKKQGYGYHDRSPSIKKNLSKSLRVSGAFKHP 181

Query: 168 KYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQ 227
           KYAGV+NDI FLI+NDDSFRK KLFKFFFP +SRSD  TSHLLKRT P VRPSLNYSVMQ
Sbjct: 182 KYAGVLNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTPPAVRPSLNYSVMQ 241

Query: 228 YLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTNEK 287
           Y LNTKN+MHFDP+VVLNH VAPGVAEPSTMGGAN QGRS + RIRSRIAFFVESST+EK
Sbjct: 242 YYLNTKNQMHFDPLVVLNHFVAPGVAEPSTMGGANRQGRSNELRIRSRIAFFVESSTSEK 301

Query: 288 KCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG----------DTRE 347
           K L E K+ L HFIRQ NDLRFAG TKTTISLFPFFGATFFFPRDG          D RE
Sbjct: 302 KSLAEDKKGLPHFIRQENDLRFAGRTKTTISLFPFFGATFFFPRDGVGVYKHLFFEDARE 361

Query: 348 QLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNSYL 407
           QLLGQLRIKCW LMGKDKV+ELIEKFIDLGGIGELIKGIE+MIEIILRNRRI YGYNSYL
Sbjct: 362 QLLGQLRIKCWKLMGKDKVMELIEKFIDLGGIGELIKGIEIMIEIILRNRRIPYGYNSYL 421

Query: 408 NEVQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIVKD 467
           NEV+K+       TKTNT+IESVKIKSVYQS  PIAQDISFQ RNK RSFRSI ++IVKD
Sbjct: 422 NEVKKMRSLLSNRTKTNTIIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVKD 481

Query: 468 IPLVMKK---------RGRSEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGILG 511
           IPLVMKK          GRS+G EIARTECGKYGKTS NVFNQKIDYAPAEVSTRYGILG
Sbjct: 482 IPLVMKKGVEGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILG 541

[Close]

BLAST of CmaCh11G012200 vs. Swiss-Prot
Match: RT03_MAIZE (Ribosomal protein S3, mitochondrial OS=Zea mays GN=RPS3 PE=3 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 2.0e-176
Identity = 338/434 (77.88%), Postives = 357/434 (82.26%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHP 167
           VRGRGA KRVESI   DREK+NE+RIWPKK + YGYHDR+PSRK+N SKSLRVSGAFKHP
Sbjct: 122 VRGRGAGKRVESI---DREKQNEIRIWPKKMQRYGYHDRTPSRKKNFSKSLRVSGAFKHP 181

Query: 168 KYAGVVNDIVFLIKNDDSFRKMKLFKFFF-PNQSRSDDLTSHLLKRTLPEVRPSLNYSVM 227
           KYAGVVNDI FLI+NDDSF K KLFKFFF P +SRSD  TSHLLKRTLP VRPSLNYSVM
Sbjct: 182 KYAGVVNDIAFLIENDDSFIKTKLFKFFFLPKKSRSDGPTSHLLKRTLPAVRPSLNYSVM 241

Query: 228 QYLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTNE 287
           QY  NTKNKMHFDP+VVLNH VAPGVAEPSTMGGA  +G SLDKRIRSRIAFFVESST++
Sbjct: 242 QYFFNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGA--KGGSLDKRIRSRIAFFVESSTSD 301

Query: 288 KKCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG----------DTR 347
           KKCL   K+RL HFIRQANDLRFAGTTKTTISLFPFFGATFFF RDG            R
Sbjct: 302 KKCLARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFFSRDGVGVYNNPFYEYAR 361

Query: 348 EQLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNSY 407
           EQLLGQLRIKC NLMGKDKV+ELIEKFIDLG IG+LIKGIEMMIEIILR RRI YGYNSY
Sbjct: 362 EQLLGQLRIKCRNLMGKDKVMELIEKFIDLGRIGKLIKGIEMMIEIILRKRRIPYGYNSY 421

Query: 408 LNEVQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIVK 467
           LNEVQK+       T TNTLIESVKIKSVYQS   IAQDISFQLRN   SFRSI +KIVK
Sbjct: 422 LNEVQKMRSFLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVK 481

Query: 468 DIPLVMKK---------RGRSEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGIL 515
           DIPL+M K          GR  G EIARTECGKYGKTS NVFNQKIDYAPAEVSTR GI 
Sbjct: 482 DIPLIMPKGVEGIRICCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRDGIS 541

[Close]

BLAST of CmaCh11G012200 vs. Swiss-Prot
Match: RT03_BRANA (Ribosomal protein S3, mitochondrial OS=Brassica napus GN=RPS3 PE=3 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 5.1e-164
Identity = 313/428 (73.13%), Postives = 343/428 (80.14%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHP 167
           VRGRGA KRVESIRLDDR+K+NE+R WPKKK+ YGYHDR+PS K+NLSKSLR+SGAFKHP
Sbjct: 121 VRGRGARKRVESIRLDDRKKQNEIRGWPKKKQRYGYHDRTPSIKKNLSKSLRISGAFKHP 180

Query: 168 KYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQ 227
           KY GVVNDI FLI+NDDSFRK KLFKFFFP +SRSD  TS+L  RTLP V PSLN+ VMQ
Sbjct: 181 KYGGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSYL--RTLPAVGPSLNFLVMQ 240

Query: 228 YLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQG-RSLDKRIRSRIAFFVESSTNE 287
           Y  NTKN+M+FDP+VVLNH VAPG AEPSTMG AN  G RSL KRIRSRIAFFVESST+E
Sbjct: 241 YFFNTKNQMNFDPVVVLNHFVAPGAAEPSTMGRANGTGDRSLQKRIRSRIAFFVESSTSE 300

Query: 288 KKCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG-------DTREQL 347
           KKCL E K RLTH IR ANDL FAGTTKTTISLFPFFGATFFF RDG       D REQL
Sbjct: 301 KKCLAEAKNRLTHLIRLANDLGFAGTTKTTISLFPFFGATFFFLRDGVGVTNNLDAREQL 360

Query: 348 LGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNSYLNE 407
           L QLR+KCWNL+GKDKV+ELIEKF DLGGI ELIK I+MMIEIILR R I YGYNSY NE
Sbjct: 361 LNQLRVKCWNLLGKDKVMELIEKFKDLGGIEELIKVIDMMIEIILRKRGIPYGYNSYFNE 420

Query: 408 VQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIVKDIP 467
           VQK+       T T TLIESVKIKSVYQS   IAQDISFQL+NK RS  SI  KIVK+IP
Sbjct: 421 VQKMRSFLSNRTNTKTLIESVKIKSVYQSASLIAQDISFQLKNKRRSTHSIFAKIVKEIP 480

Query: 468 LVMKK-----RGR-SEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGILGVKMWI 515
             ++       GR  +  E A+T+C K+ KTS NVFNQKIDYAPAEVSTRYGI GVK+WI
Sbjct: 481 KRVEGIRICFSGRLKDAAEKAQTKCYKHRKTSRNVFNQKIDYAPAEVSTRYGISGVKVWI 540

[Close]

BLAST of CmaCh11G012200 vs. Swiss-Prot
Match: RT03_ORYSJ (Ribosomal protein S3, mitochondrial OS=Oryza sativa subsp. japonica GN=RPS3 PE=3 SV=1)

HSP 1 Score: 574.3 bits (1479), Expect = 1.6e-162
Identity = 320/433 (73.90%), Postives = 337/433 (77.83%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHP 167
           VRGRGA KRVESI   DREK+NE+RIWPKK + YGYHDRSPSRK+N SKSLRVSGAFKHP
Sbjct: 122 VRGRGAGKRVESI---DREKQNEIRIWPKKMQRYGYHDRSPSRKKNFSKSLRVSGAFKHP 181

Query: 168 KYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQ 227
           KYAGVVNDI FLI+ND                      TSHLLKRTLP VRPSLNYSVMQ
Sbjct: 182 KYAGVVNDIAFLIENDGP--------------------TSHLLKRTLPAVRPSLNYSVMQ 241

Query: 228 YLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTNEK 287
           Y  NTKNKMHFDP+VVLNH VAPGVAEPSTMGGA  +G SLDKRIRSRIAFFVESST+EK
Sbjct: 242 YFFNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGA--KGGSLDKRIRSRIAFFVESSTSEK 301

Query: 288 KCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG----------DTRE 347
           KCL   K+RL HFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG            RE
Sbjct: 302 KCLARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNPFFEYARE 361

Query: 348 QLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNSYL 407
           QLLGQLRIKC NLMGKDKV+ELIEKFI LG IG+LIKGIEMMIEIILR R I YGYNSYL
Sbjct: 362 QLLGQLRIKCRNLMGKDKVMELIEKFIYLGRIGKLIKGIEMMIEIILRKRIIPYGYNSYL 421

Query: 408 NEVQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIVKD 467
           NEVQK+       T TNTLIESVKIKSVYQS   IAQDISFQL N   SFRSI ++IVKD
Sbjct: 422 NEVQKMRSFLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKD 481

Query: 468 IPLVMKK---------RGRSEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGILG 515
           IPL+M K          GR  G EIARTECGKYGKTS NVFNQKIDYA AEVSTR GI G
Sbjct: 482 IPLIMPKGVEGIRICCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISG 529

[Close]

BLAST of CmaCh11G012200 vs. TrEMBL
Match: B9TAP3_RICCO (60S ribosomal protein L16, putative OS=Ricinus communis GN=RCOM_2145580 PE=3 SV=1)

HSP 1 Score: 891.7 bits (2303), Expect = 5.2e-256
Identity = 460/562 (81.85%), Postives = 486/562 (86.48%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHP 167
           VRGRGA KRVESIRLDDREK+NE+RIWPKKK+ YGYHDRSPS K+NLSKSLRVSGAFKHP
Sbjct: 120 VRGRGAGKRVESIRLDDREKENEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKHP 179

Query: 168 KYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQ 227
           KYAGVVNDI FLI+NDDSFRK KLFKFFFP +SRSD  TSHLLKRTLP V  SLNYSVMQ
Sbjct: 180 KYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVCLSLNYSVMQ 239

Query: 228 YLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTNEK 287
           YLLNTKN++HFDP+VVLNH VAPGVAEPSTMGGAN QGRSLDKRIRSRIAFFVESST+EK
Sbjct: 240 YLLNTKNQIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSEK 299

Query: 288 KCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG----------DTRE 347
            CL+E K+RLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG          D RE
Sbjct: 300 NCLSEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDARE 359

Query: 348 QLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNSYL 407
           QLLGQLRIKCWNLMGKDKV+ELIEKFI+LGGIGELIKGIEMMIEIILRNRRI YGYNSYL
Sbjct: 360 QLLGQLRIKCWNLMGKDKVMELIEKFINLGGIGELIKGIEMMIEIILRNRRIPYGYNSYL 419

Query: 408 NEVQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIVKD 467
           NE++K+       T TNTLIES+K+KSVYQS  PIAQDISFQLRNKTRSFRSI +KIVKD
Sbjct: 420 NEMKKMRSLLSNRTNTNTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKD 479

Query: 468 IPLVMKK---------RGRSEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGILG 527
           IPLVMKK          GR EG EIARTECGKYGKTS NVFNQKIDYAPAEVSTRYGI  
Sbjct: 480 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGI-- 539

Query: 528 VKMWISYKKPKKGTCCRDCKPDGTQLGFGRYGTQSCRVGRLSFRAIEAVHRAIIGQFRRA 587
                       G C R CK DGTQLGFGRYGT+SC+ GRLS+RAIEA  RAIIGQF RA
Sbjct: 540 -----------SGRCSRGCKLDGTQLGFGRYGTKSCKAGRLSYRAIEAARRAIIGQFHRA 599

Query: 588 MNGQFRRNCQIWVRVLADLPITRKPTEVRMGRGKGNPTGWIAHVSTGQIPFEIDGVSLSN 644
           M+GQFRRN +IWVRVLADLPIT KPTEVRMGRGKGNPTGWIA VSTGQIPFE+DGVSLSN
Sbjct: 600 MSGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSN 659

[Close]

BLAST of CmaCh11G012200 vs. TrEMBL
Match: A0A0D2PS99_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G161500 PE=3 SV=1)

HSP 1 Score: 815.5 bits (2105), Expect = 4.7e-233
Identity = 438/591 (74.11%), Postives = 474/591 (80.20%), Query Frame = 1


Query: 86  VNLKSYFGSIRPPTRLPFGFRL-----------VRGRGAEKRVESIRLDDREKKNEVRIW 145
           +NL+SYFGSIRPPTRL FGFRL           VRGRGA KRV S RLDDREK+NE+RIW
Sbjct: 34  LNLRSYFGSIRPPTRLTFGFRLGSDDTEEERNEVRGRGAGKRVGSTRLDDREKQNEIRIW 93

Query: 146 PKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHPKYAGVVNDIVFLIKNDDSFRKMKLFKF 205
           PKKK+ YGYHDRSPS K+NLSKSLRVSGAFKHPKYA VVNDI FLIKNDDSFRK KLFKF
Sbjct: 94  PKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKHPKYARVVNDITFLIKNDDSFRKTKLFKF 153

Query: 206 FFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQYLLNTKNKMHFDPIVVLNHLVAPGVAE 265
            FP +SRSD  TSHLLKRTLP VRPSLNYSVMQYLLN KN++HFDP+VVLNH VAPGVAE
Sbjct: 154 LFPKKSRSDGPTSHLLKRTLPAVRPSLNYSVMQYLLNRKNQIHFDPVVVLNHFVAPGVAE 213

Query: 266 PSTMGGANTQGRSLDKRIRSRIAFFVESSTNEKKCLTEPKRRLTHFIRQANDLRFAGTTK 325
           PSTMG AN QG+SLDKRIRSRIAFFVESST+EKKCL E K+RLTHFIR ANDLRFAGTTK
Sbjct: 214 PSTMGRANAQGKSLDKRIRSRIAFFVESSTSEKKCLAEKKKRLTHFIRLANDLRFAGTTK 273

Query: 326 TTISLFPFFGATFFFPRDG------------DTREQLLGQLRIKCWNLMGKDKVIELIEK 385
           TTISLFPFFGATFFF RDG              RE+LLGQLRIKCWNLMGKDKV+ELIEK
Sbjct: 274 TTISLFPFFGATFFFLRDGVGVFKNLFFEDAREREKLLGQLRIKCWNLMGKDKVMELIEK 333

Query: 386 FIDLGGIGELIKGIEMMIEIILRNRRIL-YGYNSYLNEVQKITKTNTLIESVKIKSVYQS 445
           FI+LGGI ELIKGIEM+IEII+  + I+ YG           T TNTLIESVKIKSVYQS
Sbjct: 334 FINLGGIEELIKGIEMIIEIIILRKTIIPYG-----------TNTNTLIESVKIKSVYQS 393

Query: 446 VYPIAQDISFQLRNKTRSFRSILTKIVKDIPLVMKK---------RGRSEGMEIARTECG 505
             PIAQDIS QLR KTRSFRSI  KIVK+IPLVMKK          GR +G EIARTEC 
Sbjct: 394 ASPIAQDISLQLRKKTRSFRSIFRKIVKEIPLVMKKGVSGIRICCSGRLKGAEIARTEC- 453

Query: 506 KYGKTSHNVFNQKIDYAPAEVSTRYGILGVKMWISYKKPKKGTCCRDCKPDGTQLGFGRY 565
             GK S  +  + +     +VS + G L VK      K +KG C R CKPDGT+LGFGRY
Sbjct: 454 --GKKSIMLLRKYLLVTEYQVS-KCGFLIVKK--GGTKYRKGRCSRGCKPDGTKLGFGRY 513

Query: 566 GTQSCRVGRLSFRAIEAVHRAIIGQFRRAMNGQFRRNCQIWVRVLADLPITRKPTEVRMG 625
           GT+SC+ GRLS+RAIEA  RAIIGQF RAM+GQFRRN +IWVRVLADLPIT KPTEVRMG
Sbjct: 514 GTKSCKAGRLSYRAIEAARRAIIGQFHRAMSGQFRRNGKIWVRVLADLPITGKPTEVRMG 573

Query: 626 RGKGNPTGWIAHVSTGQIPFEIDGVSLSNARQAATLAAHKPCSSTKFVQWS 644
           RGKGNPTGWIA VSTGQIPFE++GVSLSNARQAATLAAHKPCSSTKFVQWS
Sbjct: 574 RGKGNPTGWIARVSTGQIPFEMEGVSLSNARQAATLAAHKPCSSTKFVQWS 607

[Close]

BLAST of CmaCh11G012200 vs. TrEMBL
Match: A0A0E0HNP9_ORYNI (Uncharacterized protein OS=Oryza nivara PE=3 SV=1)

HSP 1 Score: 798.1 bits (2060), Expect = 7.8e-228
Identity = 429/564 (76.06%), Postives = 453/564 (80.32%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHP 167
           VRGRGA KRVESI   DREK+NE+RIWPKK + YGYHDRSPSRK+N SKSLRVSGAFKHP
Sbjct: 137 VRGRGAGKRVESI---DREKQNEIRIWPKKMQRYGYHDRSPSRKKNFSKSLRVSGAFKHP 196

Query: 168 KYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQ 227
           KYAGVVNDI FLI+ND                      TSHLLKRTLP VRPSLNYSVMQ
Sbjct: 197 KYAGVVNDIAFLIENDGP--------------------TSHLLKRTLPAVRPSLNYSVMQ 256

Query: 228 YLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTNEK 287
           Y  NTKNKMHFDP+VVLNH VAPGVAEPSTMGGA  +G SLDKRIRSRIAFFVESST+EK
Sbjct: 257 YFFNTKNKMHFDPVVVLNHFVAPGVAEPSTMGGA--KGGSLDKRIRSRIAFFVESSTSEK 316

Query: 288 KCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGD----------TRE 347
           KCL   K+RL HFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG            RE
Sbjct: 317 KCLARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNPFFEYARE 376

Query: 348 QLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNSYL 407
           QLLGQLRIKC NLMGKDKV+ELIEKFI LG IG+LIKGIEMMIEIILR R I YGYNSYL
Sbjct: 377 QLLGQLRIKCRNLMGKDKVMELIEKFIYLGRIGKLIKGIEMMIEIILRKRIIPYGYNSYL 436

Query: 408 NEVQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIVKD 467
           NEVQK+       T TNTLIESVKIKSVYQS   IAQDISFQL N   SFRSI ++IVKD
Sbjct: 437 NEVQKMRSFLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKD 496

Query: 468 IPLVMKK---------RGRSEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGILG 527
           IPL+M K          GR  G EIARTECGKYGKTS NVFNQKIDYA AEVSTR GI G
Sbjct: 497 IPLIMPKGVEGIRICCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISG 556

Query: 528 VKMWISYKKPKKGTCCRD--CKPDGTQLGFGRYGTQSCRVGRLSFRAIEAVHRAIIGQFR 587
           VK+ ISY + KKG    +  C+PDGTQLGFGRYGT+SCR GRLS+RAIEA  RA IGQF 
Sbjct: 557 VKVRISYSQNKKGRAISETGCEPDGTQLGFGRYGTKSCRAGRLSYRAIEAARRATIGQFH 616

Query: 588 RAMNGQFRRNCQIWVRVLADLPITRKPTEVRMGRGKGNPTGWIAHVSTGQIPFEIDGVSL 644
           RAM+GQFRRNC+IWVRVLADLPIT KP EVRMGRGKGNPTGWIA VSTGQIPFE+DGVSL
Sbjct: 617 RAMSGQFRRNCKIWVRVLADLPITGKPAEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSL 675

[Close]

BLAST of CmaCh11G012200 vs. TrEMBL
Match: S8EFA8_9LAMI (Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_00003 PE=3 SV=1)

HSP 1 Score: 797.7 bits (2059), Expect = 1.0e-227
Identity = 429/577 (74.35%), Postives = 456/577 (79.03%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDR--------------EKKNEVRIWPKKKEHYGYHDRSPSRKRN 167
           V GRG+ KRVESIR +D               +K+NE+RIWPKK EHYGYHDRSP  K+N
Sbjct: 117 VGGRGSGKRVESIRFEDARPKGRVRMDGFQKMKKENEIRIWPKK-EHYGYHDRSPWIKKN 176

Query: 168 LSKSLRVSGAFKHPKYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRT 227
           LSK L+VSG FKHPKYAGVVN + FLI+NDDSF K KLFKFFFP +SRSD  TSHL +RT
Sbjct: 177 LSKELQVSGTFKHPKYAGVVNGMSFLIENDDSFIKTKLFKFFFPKKSRSDSPTSHLQQRT 236

Query: 228 LPEVRPSLNYSVMQYLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQ-GRSLDKRI 287
           LP VR SLNYSVMQYLLNTKNKMHFD   VLNH VAPGVAEPSTMGG N Q G   DKRI
Sbjct: 237 LPAVRSSLNYSVMQYLLNTKNKMHFDSGGVLNHFVAPGVAEPSTMGGDNAQDGWKEDKRI 296

Query: 288 RSRIAFFVESSTNEKKCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRD 347
           RSRIAFFVESST+EKKC  EPK+RLTHFIRQANDLRFAGT K TISLFPFFGATFFFPRD
Sbjct: 297 RSRIAFFVESSTSEKKCFAEPKKRLTHFIRQANDLRFAGTRKPTISLFPFFGATFFFPRD 356

Query: 348 G----------DTREQLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEI 407
           G          + REQLLGQ   KCWNLM K+KV+ELIEKFIDLG IGELIKGIEMMI+I
Sbjct: 357 GVGVYNNLFFENAREQLLGQCWRKCWNLMAKNKVMELIEKFIDLGRIGELIKGIEMMIDI 416

Query: 408 ILRNRRILYGYNSYLNEVQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRN 467
           ILRNRRI YG NSYLNEV+K+       T TNT IESVKIKSVYQS  PIAQDISFQL  
Sbjct: 417 ILRNRRIPYGLNSYLNEVKKMRSLLSNRTATNTNIESVKIKSVYQSASPIAQDISFQLST 476

Query: 468 KTRSFRSILTKIVKDIPLVMKK---------RGRSEGMEIARTECGKYGKTSHNVFNQKI 527
           KTRSFRSILT+IV +IPLVMKK          GRS+G EIARTECGKYGKTS NVFNQKI
Sbjct: 477 KTRSFRSILTQIVSNIPLVMKKGVTGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKI 536

Query: 528 DYAPAEVSTRYGILGVKMWISYKKPKKGTCCRDCKPDGTQLGFGRYGTQSCRVGRLSFRA 587
           DYA AEVSTRYGILG              C R CKPDGTQLGFGRYGTQSCR GRLS+RA
Sbjct: 537 DYASAEVSTRYGILG-------------RCSRSCKPDGTQLGFGRYGTQSCRAGRLSYRA 596

Query: 588 IEAVHRAIIGQFRRAMNGQFRRNCQIWVRVLADLPITRKPTEVRMGRGKGNPTGWIAHVS 644
           IEA  RAIIG F RAM+GQFRRN  +WVRV AD+PIT KPTEVRMGRGKGNPTGWIA VS
Sbjct: 597 IEAARRAIIGHFHRAMSGQFRRNGLLWVRVFADIPITGKPTEVRMGRGKGNPTGWIARVS 656

[Close]

BLAST of CmaCh11G012200 vs. TrEMBL
Match: M7ZZG3_TRIUA (Ribosomal protein S3, mitochondrial OS=Triticum urartu GN=TRIUR3_19960 PE=3 SV=1)

HSP 1 Score: 758.8 bits (1958), Expect = 5.2e-216
Identity = 405/546 (74.18%), Postives = 437/546 (80.04%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHP 167
           VRG+GA KRVESI   DREK+NE+RIWPKK + YGYHDRSPSRK+NL KSLRVSGAFK P
Sbjct: 140 VRGQGAGKRVESI---DREKQNEIRIWPKKMQRYGYHDRSPSRKKNLDKSLRVSGAFKRP 199

Query: 168 KYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQ 227
           +YAGVVNDI FL+ N  S  K    + F P +SRSD  TSHLLKRTLP VRPSLNYSVMQ
Sbjct: 200 QYAGVVNDIPFLMGNAASLLKRNRIQLFLPKKSRSDGPTSHLLKRTLPAVRPSLNYSVMQ 259

Query: 228 YLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTNEK 287
           Y  NTKNKMHFDP++VLNH VAPGVAEPSTMGGA  +G SLDKRIRSRIAFF+ESST++K
Sbjct: 260 YFFNTKNKMHFDPVLVLNHFVAPGVAEPSTMGGA--KGGSLDKRIRSRIAFFLESSTSDK 319

Query: 288 KCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG----------DTRE 347
           KCL   K+RL HFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG            R+
Sbjct: 320 KCLARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNPFFEYARK 379

Query: 348 QLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNSYL 407
           QLL Q RIKC NLMGKDKV+ELIEKFIDLG IG+LIKGIEMMIEIILR R I YGYNS L
Sbjct: 380 QLLAQFRIKCRNLMGKDKVMELIEKFIDLGRIGKLIKGIEMMIEIILRKRIIPYGYNSDL 439

Query: 408 NEVQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIVKD 467
           NEV K+       T TNTLIESVKIKSVYQS   IAQDISFQLRN   SFRSI +KIVKD
Sbjct: 440 NEVLKMRSFLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKD 499

Query: 468 IPLVMKK---------RGRSEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGILG 527
           IPL+M K          GR  G EIARTECGKYGKTS NVFNQKIDYAPAEVSTR GI G
Sbjct: 500 IPLIMPKGVEGIRICCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISG 559

Query: 528 VKMWISYKKPKKG-----TCCRDCKPDGTQLGFGRYGTQSCRVGRLSFRAIEAVHRAIIG 587
           VK+ ISY + KKG     TC R  +PDGTQLGFGRYGT+SCR GRLS+RAIEA  RA IG
Sbjct: 560 VKVRISYSQNKKGRAISETCSRGREPDGTQLGFGRYGTKSCRAGRLSYRAIEAARRATIG 619

Query: 588 QFRRAMNGQFRRNCQIWVRVLADLPITRKPTEVRMGRGKGNPTGWIAHVSTGQIPFEIDG 623
           QF RAM+GQFRRNC+IWVRVLADLPIT KP EVRMGRGKGNPTGWIA VSTGQIPFE+DG
Sbjct: 620 QFHRAMSGQFRRNCKIWVRVLADLPITGKPAEVRMGRGKGNPTGWIARVSTGQIPFEMDG 679

[Close]

BLAST of CmaCh11G012200 vs. TAIR10
Match: ATMG00090.1 (ATMG00090.1 structural constituent of ribosome;protein binding)

HSP 1 Score: 580.5 bits (1495), Expect = 1.3e-165
Identity = 309/425 (72.71%), Postives = 343/425 (80.71%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHP 167
           VRGRGA KRVESIRLDDR+K+NE+R WPKKK+ YGYHDR PS K+NLSKSLR+SGAFKHP
Sbjct: 123 VRGRGARKRVESIRLDDRKKQNEIRGWPKKKQRYGYHDRLPSIKKNLSKSLRISGAFKHP 182

Query: 168 KYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQ 227
           KYAGVVNDI FLI+NDDSF+K KLFK FF N+SRSD  TS+L  RTLP VRPSLN+ VMQ
Sbjct: 183 KYAGVVNDIAFLIENDDSFKKTKLFKLFFQNKSRSDGPTSYL--RTLPAVRPSLNFLVMQ 242

Query: 228 YLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTNEK 287
           Y  NTKN+++FDP+VVLNH VAPG AEPSTMG AN QGRSL KRIRSRIAFFVESST+EK
Sbjct: 243 YFFNTKNQINFDPVVVLNHFVAPGAAEPSTMGRANAQGRSLQKRIRSRIAFFVESSTSEK 302

Query: 288 KCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG-------DTREQLL 347
           KCL E K RLTHFIR ANDLRFAGTTKTTISLFPFFGATFFF RDG       D REQLL
Sbjct: 303 KCLAEAKNRLTHFIRLANDLRFAGTTKTTISLFPFFGATFFFLRDGVGVYNNLDAREQLL 362

Query: 348 GQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNSYLNEV 407
            QLR+KCWNL+GKDK++ELIEK  +LGGI ELIK I+MMIEIILR R I Y YNSY  EV
Sbjct: 363 NQLRVKCWNLVGKDKIMELIEKLKNLGGIEELIKVIDMMIEIILRKRGIPYRYNSYFYEV 422

Query: 408 QKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIVKDIPL 467
           +K+       T T TLIESVKIKSVYQS  PIAQDISFQL+NK RSF SI  KIVK+IP 
Sbjct: 423 KKMRSFLSNRTNTKTLIESVKIKSVYQSASPIAQDISFQLKNKRRSFHSIFAKIVKEIPK 482

Query: 468 VMKK-----RGR-SEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGILGVKMWIS 513
            ++       GR  +  E A+T+C K+ KTS NVFN KIDYAPAEVSTRYGI GVK+WIS
Sbjct: 483 GVEGIRICFSGRLKDAAEKAQTKCYKHRKTSRNVFNHKIDYAPAEVSTRYGISGVKVWIS 542

[Close]

BLAST of CmaCh11G012200 vs. TAIR10
Match: ATMG00080.1 (ATMG00080.1 ribosomal protein L16)

HSP 1 Score: 241.5 bits (615), Expect = 1.4e-63
Identity = 113/136 (83.09%), Postives = 122/136 (89.71%), Query Frame = 1


Query: 508 YKKPKKGTCCRDCKPDGTQLGFGRYGTQSCRVGRLSFRAIEAVHRAIIGQFRRAMNGQFR 567
           Y K +KG C R CKPDGT+LGFGRYGT+SC+ GRLS+RAIEA  RAIIG F RAM+GQFR
Sbjct: 44  YSKYRKGRCSRGCKPDGTKLGFGRYGTKSCKAGRLSYRAIEAARRAIIGHFHRAMSGQFR 103

Query: 568 RNCQIWVRVLADLPITRKPTEVRMGRGKGNPTGWIAHVSTGQIPFEIDGVSLSNARQAAT 627
           RN +IWVRV ADLPIT KPTEVRMGRGKGNPTGWIA VSTGQIPFE+DGVSL+NARQAAT
Sbjct: 104 RNGKIWVRVFADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLANARQAAT 163

Query: 628 LAAHKPCSSTKFVQWS 644
           LAAHKPCSSTKFVQWS
Sbjct: 164 LAAHKPCSSTKFVQWS 179

[Close]

BLAST of CmaCh11G012200 vs. TAIR10
Match: ATCG00790.1 (ATCG00790.1 ribosomal protein L16)

HSP 1 Score: 90.1 bits (222), Expect = 5.3e-18
Identity = 48/117 (41.03%), Postives = 68/117 (58.12%), Query Frame = 1


Query: 524 GTQLGFGRYGTQSCRVGRLSFRAIEAVHRAIIGQFRRAMNGQFRRNCQIWVRVLADLPIT 583
           G ++ FGRY  Q+     ++ R IEA         RRAM    RR  +IWVR+  D P+T
Sbjct: 24  GNRICFGRYALQTLEPAWITSRQIEAG--------RRAMTRNVRRGGKIWVRIFPDKPVT 83

Query: 584 RKPTEVRMGRGKGNPTGWIAHVSTGQIPFEIDGVSLSNARQAATLAAHKPCSSTKFV 641
            +P E RMG GKG+P  W+A V  G+I +E+ GV  + AR+A ++AA K    T+F+
Sbjct: 84  VRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKMPIKTQFI 132

[Close]

BLAST of CmaCh11G012200 vs. TAIR10
Match: AT2G28830.1 (AT2G28830.1 PLANT U-BOX 12)

HSP 1 Score: 80.1 bits (196), Expect = 5.5e-15
Identity = 45/110 (40.91%), Postives = 61/110 (55.45%), Query Frame = 1


Query: 531 RYGTQSCRVGRLSFRAIEAVHRAIIGQFRRAMNGQFRRNCQIWVRVLADLPITRKPTEVR 590
           RY  Q+     ++ R IEA         RRAM     R   + V + AD P+T +P E R
Sbjct: 858 RYALQTLEPAWITSRQIEAG--------RRAMTRNIGRGLTVRVHIFADKPVTVRPPETR 917

Query: 591 MGRGKGNPTGWIAHVSTGQIPFEIDGVSLSNARQAATLAAHKPCSSTKFV 641
           MGRGKG P  W+A V  G+I +E+ GVS   AR+A ++AA K  + TKF+
Sbjct: 918 MGRGKGAPAFWVAVVKPGKIIYEMGGVSEKVAREAISIAASKLPAKTKFI 959

[Close]

BLAST of CmaCh11G012200 vs. TAIR10
Match: AT2G44065.1 (AT2G44065.1 Ribosomal protein L2 family)

HSP 1 Score: 63.9 bits (154), Expect = 4.1e-10
Identity = 32/64 (50.00%), Postives = 45/64 (70.31%), Query Frame = 1


Query: 22  LDLNSQIGNCIPFVNICIETWVHDIECHPGQSAKLARAAGTFAKIMKQPAPPTLSLRLVR 81
           +D+NS IG+ +P   + I T +H+IE +PGQ AK+ RAAGT AKI+K+PA       L++
Sbjct: 53  MDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKC---LIK 112

Query: 82  LPSG 86
           LPSG
Sbjct: 113 LPSG 113

[Close]

BLAST of CmaCh11G012200 vs. NCBI nr
Match: gi|223523477|gb|EEF27073.1| (60S ribosomal protein L16, putative [Ricinus communis])

HSP 1 Score: 891.7 bits (2303), Expect = 7.4e-256
Identity = 460/562 (81.85%), Postives = 486/562 (86.48%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHP 167
           VRGRGA KRVESIRLDDREK+NE+RIWPKKK+ YGYHDRSPS K+NLSKSLRVSGAFKHP
Sbjct: 120 VRGRGAGKRVESIRLDDREKENEIRIWPKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKHP 179

Query: 168 KYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQ 227
           KYAGVVNDI FLI+NDDSFRK KLFKFFFP +SRSD  TSHLLKRTLP V  SLNYSVMQ
Sbjct: 180 KYAGVVNDIAFLIENDDSFRKTKLFKFFFPKKSRSDGPTSHLLKRTLPAVCLSLNYSVMQ 239

Query: 228 YLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTNEK 287
           YLLNTKN++HFDP+VVLNH VAPGVAEPSTMGGAN QGRSLDKRIRSRIAFFVESST+EK
Sbjct: 240 YLLNTKNQIHFDPVVVLNHFVAPGVAEPSTMGGANAQGRSLDKRIRSRIAFFVESSTSEK 299

Query: 288 KCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG----------DTRE 347
            CL+E K+RLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG          D RE
Sbjct: 300 NCLSEAKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNLFFEDARE 359

Query: 348 QLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNSYL 407
           QLLGQLRIKCWNLMGKDKV+ELIEKFI+LGGIGELIKGIEMMIEIILRNRRI YGYNSYL
Sbjct: 360 QLLGQLRIKCWNLMGKDKVMELIEKFINLGGIGELIKGIEMMIEIILRNRRIPYGYNSYL 419

Query: 408 NEVQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIVKD 467
           NE++K+       T TNTLIES+K+KSVYQS  PIAQDISFQLRNKTRSFRSI +KIVKD
Sbjct: 420 NEMKKMRSLLSNRTNTNTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKD 479

Query: 468 IPLVMKK---------RGRSEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGILG 527
           IPLVMKK          GR EG EIARTECGKYGKTS NVFNQKIDYAPAEVSTRYGI  
Sbjct: 480 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGI-- 539

Query: 528 VKMWISYKKPKKGTCCRDCKPDGTQLGFGRYGTQSCRVGRLSFRAIEAVHRAIIGQFRRA 587
                       G C R CK DGTQLGFGRYGT+SC+ GRLS+RAIEA  RAIIGQF RA
Sbjct: 540 -----------SGRCSRGCKLDGTQLGFGRYGTKSCKAGRLSYRAIEAARRAIIGQFHRA 599

Query: 588 MNGQFRRNCQIWVRVLADLPITRKPTEVRMGRGKGNPTGWIAHVSTGQIPFEIDGVSLSN 644
           M+GQFRRN +IWVRVLADLPIT KPTEVRMGRGKGNPTGWIA VSTGQIPFE+DGVSLSN
Sbjct: 600 MSGQFRRNGKIWVRVLADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLSN 659

[Close]

BLAST of CmaCh11G012200 vs. NCBI nr
Match: gi|763742240|gb|KJB09739.1| (hypothetical protein B456_001G161500 [Gossypium raimondii])

HSP 1 Score: 815.5 bits (2105), Expect = 6.8e-233
Identity = 438/591 (74.11%), Postives = 474/591 (80.20%), Query Frame = 1


Query: 86  VNLKSYFGSIRPPTRLPFGFRL-----------VRGRGAEKRVESIRLDDREKKNEVRIW 145
           +NL+SYFGSIRPPTRL FGFRL           VRGRGA KRV S RLDDREK+NE+RIW
Sbjct: 34  LNLRSYFGSIRPPTRLTFGFRLGSDDTEEERNEVRGRGAGKRVGSTRLDDREKQNEIRIW 93

Query: 146 PKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHPKYAGVVNDIVFLIKNDDSFRKMKLFKF 205
           PKKK+ YGYHDRSPS K+NLSKSLRVSGAFKHPKYA VVNDI FLIKNDDSFRK KLFKF
Sbjct: 94  PKKKQRYGYHDRSPSIKKNLSKSLRVSGAFKHPKYARVVNDITFLIKNDDSFRKTKLFKF 153

Query: 206 FFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQYLLNTKNKMHFDPIVVLNHLVAPGVAE 265
            FP +SRSD  TSHLLKRTLP VRPSLNYSVMQYLLN KN++HFDP+VVLNH VAPGVAE
Sbjct: 154 LFPKKSRSDGPTSHLLKRTLPAVRPSLNYSVMQYLLNRKNQIHFDPVVVLNHFVAPGVAE 213

Query: 266 PSTMGGANTQGRSLDKRIRSRIAFFVESSTNEKKCLTEPKRRLTHFIRQANDLRFAGTTK 325
           PSTMG AN QG+SLDKRIRSRIAFFVESST+EKKCL E K+RLTHFIR ANDLRFAGTTK
Sbjct: 214 PSTMGRANAQGKSLDKRIRSRIAFFVESSTSEKKCLAEKKKRLTHFIRLANDLRFAGTTK 273

Query: 326 TTISLFPFFGATFFFPRDG------------DTREQLLGQLRIKCWNLMGKDKVIELIEK 385
           TTISLFPFFGATFFF RDG              RE+LLGQLRIKCWNLMGKDKV+ELIEK
Sbjct: 274 TTISLFPFFGATFFFLRDGVGVFKNLFFEDAREREKLLGQLRIKCWNLMGKDKVMELIEK 333

Query: 386 FIDLGGIGELIKGIEMMIEIILRNRRIL-YGYNSYLNEVQKITKTNTLIESVKIKSVYQS 445
           FI+LGGI ELIKGIEM+IEII+  + I+ YG           T TNTLIESVKIKSVYQS
Sbjct: 334 FINLGGIEELIKGIEMIIEIIILRKTIIPYG-----------TNTNTLIESVKIKSVYQS 393

Query: 446 VYPIAQDISFQLRNKTRSFRSILTKIVKDIPLVMKK---------RGRSEGMEIARTECG 505
             PIAQDIS QLR KTRSFRSI  KIVK+IPLVMKK          GR +G EIARTEC 
Sbjct: 394 ASPIAQDISLQLRKKTRSFRSIFRKIVKEIPLVMKKGVSGIRICCSGRLKGAEIARTEC- 453

Query: 506 KYGKTSHNVFNQKIDYAPAEVSTRYGILGVKMWISYKKPKKGTCCRDCKPDGTQLGFGRY 565
             GK S  +  + +     +VS + G L VK      K +KG C R CKPDGT+LGFGRY
Sbjct: 454 --GKKSIMLLRKYLLVTEYQVS-KCGFLIVKK--GGTKYRKGRCSRGCKPDGTKLGFGRY 513

Query: 566 GTQSCRVGRLSFRAIEAVHRAIIGQFRRAMNGQFRRNCQIWVRVLADLPITRKPTEVRMG 625
           GT+SC+ GRLS+RAIEA  RAIIGQF RAM+GQFRRN +IWVRVLADLPIT KPTEVRMG
Sbjct: 514 GTKSCKAGRLSYRAIEAARRAIIGQFHRAMSGQFRRNGKIWVRVLADLPITGKPTEVRMG 573

Query: 626 RGKGNPTGWIAHVSTGQIPFEIDGVSLSNARQAATLAAHKPCSSTKFVQWS 644
           RGKGNPTGWIA VSTGQIPFE++GVSLSNARQAATLAAHKPCSSTKFVQWS
Sbjct: 574 RGKGNPTGWIARVSTGQIPFEMEGVSLSNARQAATLAAHKPCSSTKFVQWS 607

[Close]

BLAST of CmaCh11G012200 vs. NCBI nr
Match: gi|527210173|gb|EPS74728.1| (hypothetical protein M569_00003, partial [Genlisea aurea])

HSP 1 Score: 797.7 bits (2059), Expect = 1.5e-227
Identity = 429/577 (74.35%), Postives = 456/577 (79.03%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDR--------------EKKNEVRIWPKKKEHYGYHDRSPSRKRN 167
           V GRG+ KRVESIR +D               +K+NE+RIWPKK EHYGYHDRSP  K+N
Sbjct: 117 VGGRGSGKRVESIRFEDARPKGRVRMDGFQKMKKENEIRIWPKK-EHYGYHDRSPWIKKN 176

Query: 168 LSKSLRVSGAFKHPKYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRT 227
           LSK L+VSG FKHPKYAGVVN + FLI+NDDSF K KLFKFFFP +SRSD  TSHL +RT
Sbjct: 177 LSKELQVSGTFKHPKYAGVVNGMSFLIENDDSFIKTKLFKFFFPKKSRSDSPTSHLQQRT 236

Query: 228 LPEVRPSLNYSVMQYLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQ-GRSLDKRI 287
           LP VR SLNYSVMQYLLNTKNKMHFD   VLNH VAPGVAEPSTMGG N Q G   DKRI
Sbjct: 237 LPAVRSSLNYSVMQYLLNTKNKMHFDSGGVLNHFVAPGVAEPSTMGGDNAQDGWKEDKRI 296

Query: 288 RSRIAFFVESSTNEKKCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRD 347
           RSRIAFFVESST+EKKC  EPK+RLTHFIRQANDLRFAGT K TISLFPFFGATFFFPRD
Sbjct: 297 RSRIAFFVESSTSEKKCFAEPKKRLTHFIRQANDLRFAGTRKPTISLFPFFGATFFFPRD 356

Query: 348 G----------DTREQLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEI 407
           G          + REQLLGQ   KCWNLM K+KV+ELIEKFIDLG IGELIKGIEMMI+I
Sbjct: 357 GVGVYNNLFFENAREQLLGQCWRKCWNLMAKNKVMELIEKFIDLGRIGELIKGIEMMIDI 416

Query: 408 ILRNRRILYGYNSYLNEVQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRN 467
           ILRNRRI YG NSYLNEV+K+       T TNT IESVKIKSVYQS  PIAQDISFQL  
Sbjct: 417 ILRNRRIPYGLNSYLNEVKKMRSLLSNRTATNTNIESVKIKSVYQSASPIAQDISFQLST 476

Query: 468 KTRSFRSILTKIVKDIPLVMKK---------RGRSEGMEIARTECGKYGKTSHNVFNQKI 527
           KTRSFRSILT+IV +IPLVMKK          GRS+G EIARTECGKYGKTS NVFNQKI
Sbjct: 477 KTRSFRSILTQIVSNIPLVMKKGVTGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKI 536

Query: 528 DYAPAEVSTRYGILGVKMWISYKKPKKGTCCRDCKPDGTQLGFGRYGTQSCRVGRLSFRA 587
           DYA AEVSTRYGILG              C R CKPDGTQLGFGRYGTQSCR GRLS+RA
Sbjct: 537 DYASAEVSTRYGILG-------------RCSRSCKPDGTQLGFGRYGTQSCRAGRLSYRA 596

Query: 588 IEAVHRAIIGQFRRAMNGQFRRNCQIWVRVLADLPITRKPTEVRMGRGKGNPTGWIAHVS 644
           IEA  RAIIG F RAM+GQFRRN  +WVRV AD+PIT KPTEVRMGRGKGNPTGWIA VS
Sbjct: 597 IEAARRAIIGHFHRAMSGQFRRNGLLWVRVFADIPITGKPTEVRMGRGKGNPTGWIARVS 656

[Close]

BLAST of CmaCh11G012200 vs. NCBI nr
Match: gi|474387796|gb|EMS65086.1| (Ribosomal protein S3, mitochondrial [Triticum urartu])

HSP 1 Score: 758.8 bits (1958), Expect = 7.5e-216
Identity = 405/546 (74.18%), Postives = 437/546 (80.04%), Query Frame = 1


Query: 108 VRGRGAEKRVESIRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKHP 167
           VRG+GA KRVESI   DREK+NE+RIWPKK + YGYHDRSPSRK+NL KSLRVSGAFK P
Sbjct: 140 VRGQGAGKRVESI---DREKQNEIRIWPKKMQRYGYHDRSPSRKKNLDKSLRVSGAFKRP 199

Query: 168 KYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVMQ 227
           +YAGVVNDI FL+ N  S  K    + F P +SRSD  TSHLLKRTLP VRPSLNYSVMQ
Sbjct: 200 QYAGVVNDIPFLMGNAASLLKRNRIQLFLPKKSRSDGPTSHLLKRTLPAVRPSLNYSVMQ 259

Query: 228 YLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTNEK 287
           Y  NTKNKMHFDP++VLNH VAPGVAEPSTMGGA  +G SLDKRIRSRIAFF+ESST++K
Sbjct: 260 YFFNTKNKMHFDPVLVLNHFVAPGVAEPSTMGGA--KGGSLDKRIRSRIAFFLESSTSDK 319

Query: 288 KCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG----------DTRE 347
           KCL   K+RL HFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG            R+
Sbjct: 320 KCLARAKKRLIHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGVYNNPFFEYARK 379

Query: 348 QLLGQLRIKCWNLMGKDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNSYL 407
           QLL Q RIKC NLMGKDKV+ELIEKFIDLG IG+LIKGIEMMIEIILR R I YGYNS L
Sbjct: 380 QLLAQFRIKCRNLMGKDKVMELIEKFIDLGRIGKLIKGIEMMIEIILRKRIIPYGYNSDL 439

Query: 408 NEVQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIVKD 467
           NEV K+       T TNTLIESVKIKSVYQS   IAQDISFQLRN   SFRSI +KIVKD
Sbjct: 440 NEVLKMRSFLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKD 499

Query: 468 IPLVMKK---------RGRSEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGILG 527
           IPL+M K          GR  G EIARTECGKYGKTS NVFNQKIDYAPAEVSTR GI G
Sbjct: 500 IPLIMPKGVEGIRICCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISG 559

Query: 528 VKMWISYKKPKKG-----TCCRDCKPDGTQLGFGRYGTQSCRVGRLSFRAIEAVHRAIIG 587
           VK+ ISY + KKG     TC R  +PDGTQLGFGRYGT+SCR GRLS+RAIEA  RA IG
Sbjct: 560 VKVRISYSQNKKGRAISETCSRGREPDGTQLGFGRYGTKSCRAGRLSYRAIEAARRATIG 619

Query: 588 QFRRAMNGQFRRNCQIWVRVLADLPITRKPTEVRMGRGKGNPTGWIAHVSTGQIPFEIDG 623
           QF RAM+GQFRRNC+IWVRVLADLPIT KP EVRMGRGKGNPTGWIA VSTGQIPFE+DG
Sbjct: 620 QFHRAMSGQFRRNCKIWVRVLADLPITGKPAEVRMGRGKGNPTGWIARVSTGQIPFEMDG 679

[Close]

BLAST of CmaCh11G012200 vs. NCBI nr
Match: gi|302748681|gb|ADL63821.1| (ribosomal protein S3, partial (mitochondrion) [Cucurbita pepo])

HSP 1 Score: 714.1 bits (1842), Expect = 2.1e-202
Identity = 375/435 (86.21%), Postives = 387/435 (88.97%), Query Frame = 1


Query: 108 VRGRGAEKRVES-IRLDDREKKNEVRIWPKKKEHYGYHDRSPSRKRNLSKSLRVSGAFKH 167
           VRGR AEKRVES IRLDDREK+NE+RIWPKKK+ YGYHDRSPSRK+NLSKSLRVSGAFKH
Sbjct: 68  VRGREAEKRVESMIRLDDREKQNEIRIWPKKKQDYGYHDRSPSRKKNLSKSLRVSGAFKH 127

Query: 168 PKYAGVVNDIVFLIKNDDSFRKMKLFKFFFPNQSRSDDLTSHLLKRTLPEVRPSLNYSVM 227
           PKYAGVVNDI FLI+NDDSFRK +LFKFFFPNQSRSD  TSHLLKRTLP VRPSLNYSVM
Sbjct: 128 PKYAGVVNDIAFLIENDDSFRKTQLFKFFFPNQSRSDGPTSHLLKRTLPAVRPSLNYSVM 187

Query: 228 QYLLNTKNKMHFDPIVVLNHLVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTNE 287
           QYLLNTKNKMHFDP+ VLNH VAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESST+E
Sbjct: 188 QYLLNTKNKMHFDPVGVLNHFVAPGVAEPSTMGGANTQGRSLDKRIRSRIAFFVESSTSE 247

Query: 288 KKCLTEPKRRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG----------DTR 347
           KKCL EPK+RLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDG          DTR
Sbjct: 248 KKCLAEPKKRLTHFIRQANDLRFAGTTKTTISLFPFFGATFFFPRDGVGMYKNLFFEDTR 307

Query: 348 EQLLGQLRIKCWNLMGK-DKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRILYGYNS 407
           EQLLGQLRIKCWNLMGK DKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRI YGYNS
Sbjct: 308 EQLLGQLRIKCWNLMGKEDKVIELIEKFIDLGGIGELIKGIEMMIEIILRNRRIPYGYNS 367

Query: 408 YLNEVQKI-------TKTNTLIESVKIKSVYQSVYPIAQDISFQLRNKTRSFRSILTKIV 467
           YLNEVQK+       TKTNTLIESVKI+SVYQS  PIAQDISFQLRNKTRSFRSI TKIV
Sbjct: 368 YLNEVQKMRSLLSNRTKTNTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFTKIV 427

Query: 468 KDIPLVMKK---------RGRSEGMEIARTECGKYGKTSHNVFNQKIDYAPAEVSTRYGI 515
           KDIP  MKK          GRSEG EIARTECGKYGKTS NVFNQKIDYAPAEVSTRYGI
Sbjct: 428 KDIPFGMKKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGI 487

The following BLAST results are available for this feature:

BLAST of CmaCh11G012200 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RT03_PETHY	8.1e-194	81.52	Ribosomal protein S3, mitochondrial OS=Petunia hybrida GN=YRPS3 PE=2 SV=1	[more]
RT03_OENBE	1.6e-189	80.89	Ribosomal protein S3, mitochondrial OS=Oenothera berteroana GN=RPS3 PE=3 SV=2	[more]
RT03_MAIZE	2.0e-176	77.88	Ribosomal protein S3, mitochondrial OS=Zea mays GN=RPS3 PE=3 SV=1	[more]
RT03_BRANA	5.1e-164	73.13	Ribosomal protein S3, mitochondrial OS=Brassica napus GN=RPS3 PE=3 SV=1	[more]
RT03_ORYSJ	1.6e-162	73.90	Ribosomal protein S3, mitochondrial OS=Oryza sativa subsp. japonica GN=RPS3 PE=3...	[more]

BLAST of CmaCh11G012200 vs. TrEMBL


Match Name	E-value	Identity	Description
B9TAP3_RICCO	5.2e-256	81.85	60S ribosomal protein L16, putative OS=Ricinus communis GN=RCOM_2145580 PE=3 SV=...	[more]
A0A0D2PS99_GOSRA	4.7e-233	74.11	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G161500 PE=3 SV=1	[more]
A0A0E0HNP9_ORYNI	7.8e-228	76.06	Uncharacterized protein OS=Oryza nivara PE=3 SV=1	[more]
S8EFA8_9LAMI	1.0e-227	74.35	Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_00003 PE=3 SV=1	[more]
M7ZZG3_TRIUA	5.2e-216	74.18	Ribosomal protein S3, mitochondrial OS=Triticum urartu GN=TRIUR3_19960 PE=3 SV=1	[more]

BLAST of CmaCh11G012200 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00090.1	1.3e-165	72.71	ATMG00090.1 structural constituent of ribosome;protein binding	[more]
ATMG00080.1	1.4e-63	83.09	ATMG00080.1 ribosomal protein L16	[more]
ATCG00790.1	5.3e-18	41.03	ATCG00790.1 ribosomal protein L16	[more]
AT2G28830.1	5.5e-15	40.91	PLANT U-BOX 12	[more]
AT2G44065.1	4.1e-10	50.00	Ribosomal protein L2 family	[more]

BLAST of CmaCh11G012200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|223523477\|gb\|EEF27073.1\|	7.4e-256	81.85	60S ribosomal protein L16, putative [Ricinus communis]	[more]
gi\|763742240\|gb\|KJB09739.1\|	6.8e-233	74.11	hypothetical protein B456_001G161500 [Gossypium raimondii]	[more]
gi\|527210173\|gb\|EPS74728.1\|	1.5e-227	74.35	hypothetical protein M569_00003, partial [Genlisea aurea]	[more]
gi\|474387796\|gb\|EMS65086.1\|	7.5e-216	74.18	Ribosomal protein S3, mitochondrial [Triticum urartu]	[more]
gi\|302748681\|gb\|ADL63821.1\|	2.1e-202	86.21	ribosomal protein S3, partial (mitochondrion) [Cucurbita pepo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000114	Ribosomal_L16
IPR001351	Ribosomal_S3_C
IPR008991	Translation_prot_SH3-like_sf
IPR014722	Rib_L2_dom2
IPR016180	Ribosomal_L10e/L16
IPR018280	Ribosomal_S3_CS
IPR020798	Ribosomal_L16_CS
IPR022669	Ribosomal_L2_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0019843	rRNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation

Vocabulary: **Cellular Component**
Term	Definition
GO:0005840	ribosome
GO:0005622	intracellular

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005622	intracellular
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G012200.1	CmaCh11G012200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000114	Ribosomal protein L16	PRINTS	PR00060	RIBOSOMALL16	coord: 566..595 score: 1.5E-29coord: 542..553 score: 1.5E-29coord: 524..536 score: 1.5E-29coord: 596..625 score: 1.5
IPR000114	Ribosomal protein L16	TIGRFAMs	TIGR01164	TIGR01164	coord: 507..632 score: 6.6
IPR001351	Ribosomal protein S3, C-terminal	GENE3D	G3DSA:3.30.1140.32		coord: 418..509 score: 2.4
IPR001351	Ribosomal protein S3, C-terminal	unknown	SSF54821	Ribosomal protein S3 C-terminal domain	coord: 417..509 score: 3.4
IPR008991	Translation protein SH3-like domain	unknown	SSF50104	Translation proteins SH3-like domain	coord: 28..87 score: 4.27
IPR014722	Ribosomal protein L2 domain 2	GENE3D	G3DSA:2.30.30.30		coord: 25..85 score: 1.2
IPR016180	Ribosomal protein L10e/L16	GENE3D	G3DSA:3.90.1170.10		coord: 523..641 score: 2.7
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 509..640 score: 5.4
IPR016180	Ribosomal protein L10e/L16	unknown	SSF54686	Ribosomal protein L16p/L10e	coord: 507..640 score: 8.37
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 467..501 scor
IPR020798	Ribosomal protein L16, conserved site	PROSITE	PS00586	RIBOSOMAL_L16_1	coord: 567..578 scor
IPR020798	Ribosomal protein L16, conserved site	PROSITE	PS00701	RIBOSOMAL_L16_2	coord: 590..601 scor
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 27..86 score: 1.5
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 26..137 score: 5.
None	No IPR available	PANTHER	PTHR35928	FAMILY NOT NAMED	coord: 84..415 score: 2.3E
None	No IPR available	PANTHER	PTHR35928:SF1	SUBFAMILY NOT NAMED	coord: 84..415 score: 2.3E
None	No IPR available	PFAM	PF00189	Ribosomal_S3_C	coord: 459..506 score: 4.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G012200	Melon (DHL92) v3.6.1	cmamedB116
CmaCh11G012200	Cucumber (Chinese Long) v3	cmacucB0120
CmaCh11G012200	Watermelon (97103) v2	cmawmbB117
CmaCh11G012200	Wax gourd	cmawgoB0171
CmaCh11G012200	Cucumber (Gy14) v1	cgycmaB0055
CmaCh11G012200	Wild cucumber (PI 183967)	cmacpiB105
CmaCh11G012200	Cucumber (Chinese Long) v2	cmacuB106
CmaCh11G012200	Melon (DHL92) v3.5.1	cmameB108
CmaCh11G012200	Watermelon (Charleston Gray)	cmawcgB114
CmaCh11G012200	Watermelon (97103) v1	cmawmB101
CmaCh11G012200	Bottle gourd (USVL1VR-Ls)	cmalsiB133
CmaCh11G012200	Bottle gourd (USVL1VR-Ls)	cmalsiB142