CmaCh11G012190 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G012190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ribosomal protein L2
Location	Cma_Chr11 : 7739755 .. 7740660 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTCGACAATGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTGGAGTATAGAGAAGTCTGCTGGTAGGAATTCCTTAGGGCGTATTACGGTTTTTCACCGAGGGGGTGGATCGAAGCGATTGCAACGAAGAATTGATCTGAAATGAAGCACTTCGTCTATGGGCATTGTAGAAAGAATAGACTATGACTCTAATCGTTCTTCTCGGATCCCTCCAGTACGATGGATCGAGGGGGTCCGCCAAAGGAAATGCAAGACGATAGAGGAGTTCGCTCCACTGCGTAAGATCCTCGAACCTACCACGACCACCATCCACGACCTATTTTCGTTCTCTTCCCCGCCCGGGAAGGTGGATCAAAGAAAGGTAGCTTGCTTCTCTCCTAGACGGATGGTGGCTTATGTAGTGGCCGGCCTTCCTACCAGGATGCCTCCTTGCTCGAAGAGCCCCTTTACTATTACTAGTAAGGGAGCAGGAAGCAAAAAAACTTGCGCTAAGGACGTTTTCTTCTCTGCCTTCTCCTCTCAAAAGACCAAGGGAGAGACTGCATCCCTTTCCTTCGGTAGCTCTTTAGGTTTCCCAAGGATAGCGGTAGCTGGGGCAAAGCCCGCTTTCTTCGCTCCACGAATGAGAGAGAAAGTTAGAGGAAAAAACATGTTCTCTCTTTGCGAGGTCCAAAAGTGGAGAACGCATAGCATTCTCTGGGCACATAGGATGAAACGTAAAGCTGTGCTTGATTGGTGGAGTTTTAGGCGGCAACATACTAATGGGCTTGTTGGAGGTGCTGAGCATAACGAATCAAAACCAAAGACGGATCAAGGTAGCTTGCCTGCCAAGCCGATAGGCGAAGGGCCGAAGGATGGAGCGTGCAAAGTCAATCATGCACCTGTCGTGTGA

mRNA sequence

ATGATCTCGACAATGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTGGAGTATAGAGAAGTCTGCTGGTAGGAATTCCTTAGGGCAAAGAATAGACTATGACTCTAATCGTTCTTCTCGGATCCCTCCAGTACGATGGATCGAGGGGGTCCGCCAAAGGAAATGCAAGACGATAGAGGAGTTCGCTCCACTGCGTAAGATCCTCGAACCTACCACGACCACCATCCACGACCTATTTTCGTTCTCTTCCCCGCCCGGGAAGGTGGATCAAAGAAAGGTAGCTTGCTTCTCTCCTAGACGGATGGTGGCTTATGTAGTGGCCGGCCTTCCTACCAGGATGCCTCCTTGCTCGAAGAGCCCCTTTACTATTACTAGTAAGGGAGCAGGAAGCAAAAAAACTTGCGCTAAGGACGTTTTCTTCTCTGCCTTCTCCTCTCAAAAGACCAAGGGAGAGACTGCATCCCTTTCCTTCGGTAGCTCTTTAGGTTTCCCAAGGATAGCGGTAGCTGGGGCAAAGCCCGCTTTCTTCGCTCCACGAATGAGAGAGAAAGTTAGAGGAAAAAACATGTTCTCTCTTTGCGAGGTCCAAAAGTGGAGAACGCATAGCATTCTCTGGGCACATAGGATGAAACGTAAAGCTGTGCTTGATTGGTGGAGTTTTAGGCGGCAACATACTAATGGGCTTGTTGGAGGTGCTGAGCATAACGAATCAAAACCAAAGACGGATCAAGGTAGCTTGCCTGCCAAGCCGATAGGCGAAGGGCCGAAGGATGGAGCGTGCAAAGTCAATCATGCACCTGTCGTGTGA

Coding sequence (CDS)

ATGATCTCGACAATGAGACAAAGCCAAGAGGGGAGAGCACTTAGACAATTCACTTGGAGTATAGAGAAGTCTGCTGGTAGGAATTCCTTAGGGCAAAGAATAGACTATGACTCTAATCGTTCTTCTCGGATCCCTCCAGTACGATGGATCGAGGGGGTCCGCCAAAGGAAATGCAAGACGATAGAGGAGTTCGCTCCACTGCGTAAGATCCTCGAACCTACCACGACCACCATCCACGACCTATTTTCGTTCTCTTCCCCGCCCGGGAAGGTGGATCAAAGAAAGGTAGCTTGCTTCTCTCCTAGACGGATGGTGGCTTATGTAGTGGCCGGCCTTCCTACCAGGATGCCTCCTTGCTCGAAGAGCCCCTTTACTATTACTAGTAAGGGAGCAGGAAGCAAAAAAACTTGCGCTAAGGACGTTTTCTTCTCTGCCTTCTCCTCTCAAAAGACCAAGGGAGAGACTGCATCCCTTTCCTTCGGTAGCTCTTTAGGTTTCCCAAGGATAGCGGTAGCTGGGGCAAAGCCCGCTTTCTTCGCTCCACGAATGAGAGAGAAAGTTAGAGGAAAAAACATGTTCTCTCTTTGCGAGGTCCAAAAGTGGAGAACGCATAGCATTCTCTGGGCACATAGGATGAAACGTAAAGCTGTGCTTGATTGGTGGAGTTTTAGGCGGCAACATACTAATGGGCTTGTTGGAGGTGCTGAGCATAACGAATCAAAACCAAAGACGGATCAAGGTAGCTTGCCTGCCAAGCCGATAGGCGAAGGGCCGAAGGATGGAGCGTGCAAAGTCAATCATGCACCTGTCGTGTGA

Protein sequence

MISTMRQSQEGRALRQFTWSIEKSAGRNSLGQRIDYDSNRSSRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKVDQRKVACFSPRRMVAYVVAGLPTRMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAHRMKRKAVLDWWSFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGEGPKDGACKVNHAPVV

Homology

[Close]

BLAST of CmaCh11G012190 vs. Swiss-Prot
Match: RM02_ARATH (60S ribosomal protein L2, mitochondrial OS=Arabidopsis thaliana GN=RPL2 PE=3 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 5.2e-94
Identity = 194/300 (64.67%), Postives = 208/300 (69.33%), Query Frame = 1


Query: 12  RALRQFTWSIEKSAGRNSLG------------------------------QRIDYDSNRS 71
           RALRQFT S  KSAGRNS G                              + I+YD NRS
Sbjct: 7   RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPNRS 66

Query: 72  SRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKVDQRKVACFSP 131
           S+I PVRWI+G  Q+K  TIE+FAP RKILEPTT TI  LFSFS  PGKVD+RKVACFSP
Sbjct: 67  SQIAPVRWIKGGCQKKMNTIEKFAPPRKILEPTTNTISGLFSFSFLPGKVDKRKVACFSP 126

Query: 132 RRMVAYVVAGLPTRMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFG 191
             M AYVV GLPT MPP S S     SKGAGS KT  KDVFFSAFSS K K ETASL+F 
Sbjct: 127 GLMAAYVVVGLPTGMPPLSSSKSAFASKGAGSTKTLVKDVFFSAFSSPKAKRETASLAFA 186

Query: 192 SSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAHRMKRKAVLDWW 251
           SS GFPRIAVAGAKPAFFAPRMR+KVRGK+ FSLCEVQK RTHSILWAHR+K KA L W 
Sbjct: 187 SSFGFPRIAVAGAKPAFFAPRMRQKVRGKSTFSLCEVQKGRTHSILWAHRIKGKAGLSWQ 246

Query: 252 SFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGE-----------GPKDGACKVNHAPV 271
           SFRRQ T GLVG A H +SKPKTDQG+LPAKPIGE             KDGACKV+ APV
Sbjct: 247 SFRRQDTLGLVGAAGHKKSKPKTDQGNLPAKPIGERAKQLKALRGLRAKDGACKVDRAPV 306

[Close]

BLAST of CmaCh11G012190 vs. Swiss-Prot
Match: RM02_ORYSA (60S ribosomal protein L2, mitochondrial OS=Oryza sativa GN=RPL2 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 7.7e-45
Identity = 136/309 (44.01%), Postives = 162/309 (52.43%), Query Frame = 1


Query: 5   MRQSQEGRALRQFTWSIEKSAGRNSLGQ-RIDYDSNRSSRIPPVRWIEGVRQRKCKTIEE 64
           MRQS +GRALR FT S  KSAGRNS G+  + +    S R+          QRK      
Sbjct: 1   MRQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRL----------QRKID---- 60

Query: 65  FAPLRKILEPTTTTIHDLFSFSSPPGKVDQRKVACFSPRRMVAYVVAGLPTRMPPCSK-S 124
                  L+ +T++I  +      P +    ++A      +V ++   LP R        
Sbjct: 61  -------LKRSTSSIGIVERIEYDPNR--SSRIA------LVRWIEGVLPGRQRKFKTIE 120

Query: 125 PFTITSKGAGSKKTCAKDVF-FSAFSSQKTKGETASLSFGSSLGFPRIAVAGAKPAFFAP 184
            F +  K   S       +F FS+ SS   +GETASLSFGSSLGFPRIAVAGAKPAFFA 
Sbjct: 121 EFALPRKILESTTATIFCLFSFSSLSSPLAQGETASLSFGSSLGFPRIAVAGAKPAFFAE 180

Query: 185 RMREKVRGKNMFSLCEVQKWRTHSILWAHRMKRKAVLDWWSFRRQHTNGLVGGAEHNESK 244
           RMREK  GK  FSLCE++KWRTH +LWAHR+KRKA L W S R+Q T  LVG AEHNESK
Sbjct: 181 RMREKKIGKKTFSLCEIRKWRTHCVLWAHRIKRKAALSWQSLRQQKTLELVGAAEHNESK 240

Query: 245 PKTDQ---------------------------------------GSLPAK-PIGEGPKDG 271
            K DQ                                       GSLPAK PIGEGPKDG
Sbjct: 241 LKADQGSLLPRQVLAYALCSGRPSYLHASRSFYKALLPVEASRFGSLPAKPPIGEGPKDG 280

[Close]

BLAST of CmaCh11G012190 vs. Swiss-Prot
Match: RM02_ORYSI (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica GN=RPL2 PE=3 SV=2)

HSP 1 Score: 182.2 bits (461), Expect = 7.7e-45
Identity = 136/309 (44.01%), Postives = 162/309 (52.43%), Query Frame = 1


Query: 5   MRQSQEGRALRQFTWSIEKSAGRNSLGQ-RIDYDSNRSSRIPPVRWIEGVRQRKCKTIEE 64
           MRQS +GRALR FT S  KSAGRNS G+  + +    S R+          QRK      
Sbjct: 1   MRQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRL----------QRKID---- 60

Query: 65  FAPLRKILEPTTTTIHDLFSFSSPPGKVDQRKVACFSPRRMVAYVVAGLPTRMPPCSK-S 124
                  L+ +T++I  +      P +    ++A      +V ++   LP R        
Sbjct: 61  -------LKRSTSSIGIVERIEYDPNR--SSRIA------LVRWIEGVLPGRQRKFKTIE 120

Query: 125 PFTITSKGAGSKKTCAKDVF-FSAFSSQKTKGETASLSFGSSLGFPRIAVAGAKPAFFAP 184
            F +  K   S       +F FS+ SS   +GETASLSFGSSLGFPRIAVAGAKPAFFA 
Sbjct: 121 EFALPRKILESTTATIFCLFSFSSLSSPLAQGETASLSFGSSLGFPRIAVAGAKPAFFAE 180

Query: 185 RMREKVRGKNMFSLCEVQKWRTHSILWAHRMKRKAVLDWWSFRRQHTNGLVGGAEHNESK 244
           RMREK  GK  FSLCE++KWRTH +LWAHR+KRKA L W S R+Q T  LVG AEHNESK
Sbjct: 181 RMREKKIGKKTFSLCEIRKWRTHCVLWAHRIKRKAALSWQSLRQQKTLELVGAAEHNESK 240

Query: 245 PKTDQ---------------------------------------GSLPAK-PIGEGPKDG 271
            K DQ                                       GSLPAK PIGEGPKDG
Sbjct: 241 LKADQGSLLPRQVLAYALCSGRPSYLHASRSFYKALLPVEASRFGSLPAKPPIGEGPKDG 280

[Close]

BLAST of CmaCh11G012190 vs. Swiss-Prot
Match: RM02_ORYSJ (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica GN=RPL2 PE=2 SV=2)

HSP 1 Score: 182.2 bits (461), Expect = 7.7e-45
Identity = 136/309 (44.01%), Postives = 162/309 (52.43%), Query Frame = 1


Query: 5   MRQSQEGRALRQFTWSIEKSAGRNSLGQ-RIDYDSNRSSRIPPVRWIEGVRQRKCKTIEE 64
           MRQS +GRALR FT S  KSAGRNS G+  + +    S R+          QRK      
Sbjct: 1   MRQSIKGRALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRL----------QRKID---- 60

Query: 65  FAPLRKILEPTTTTIHDLFSFSSPPGKVDQRKVACFSPRRMVAYVVAGLPTRMPPCSK-S 124
                  L+ +T++I  +      P +    ++A      +V ++   LP R        
Sbjct: 61  -------LKRSTSSIGIVERIEYDPNR--SSRIA------LVRWIEGVLPGRQRKFKTIE 120

Query: 125 PFTITSKGAGSKKTCAKDVF-FSAFSSQKTKGETASLSFGSSLGFPRIAVAGAKPAFFAP 184
            F +  K   S       +F FS+ SS   +GETASLSFGSSLGFPRIAVAGAKPAFFA 
Sbjct: 121 EFALPRKILESTTATIFCLFSFSSLSSPLAQGETASLSFGSSLGFPRIAVAGAKPAFFAE 180

Query: 185 RMREKVRGKNMFSLCEVQKWRTHSILWAHRMKRKAVLDWWSFRRQHTNGLVGGAEHNESK 244
           RMREK  GK  FSLCE++KWRTH +LWAHR+KRKA L W S R+Q T  LVG AEHNESK
Sbjct: 181 RMREKKIGKKTFSLCEIRKWRTHCVLWAHRIKRKAALSWQSLRQQKTLELVGAAEHNESK 240

Query: 245 PKTDQ---------------------------------------GSLPAK-PIGEGPKDG 271
            K DQ                                       GSLPAK PIGEGPKDG
Sbjct: 241 LKADQGSLLPRQVLAYALCSGRPSYLHASRSFYKALLPVEASRFGSLPAKPPIGEGPKDG 280

[Close]

BLAST of CmaCh11G012190 vs. Swiss-Prot
Match: RM02_MARPO (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha GN=RPL2 PE=3 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 1.3e-12
Identity = 87/283 (30.74%), Postives = 121/283 (42.76%), Query Frame = 1


Query: 10  EGRALRQFTWSIEK-SAGRNSLG------------------------------QRIDYDS 69
           +G+AL+Q T+ +++ SAGRNS G                              +RI+YD 
Sbjct: 7   KGKALKQLTFHLKRNSAGRNSSGRITVFHRGGGSKRLQRKIDFKRSTSSMGIVERIEYDP 66

Query: 70  NRSSRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKVDQRKVAC 129
           NRSS I  VRWIEGV  R  K +  F+      E        LFSFSS P +  + K   
Sbjct: 67  NRSSWIALVRWIEGV-LRPGKRL-AFSKANSRREKNMFFFGLLFSFSSLPRQAQRIK--- 126

Query: 130 FSPRRMVAYVVAGLPTRMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQKTKGETASL 189
           +   R            + PC +     +S   G++   AK+V                 
Sbjct: 127 YEKTR-----------ALRPCEQ--ILESSWVLGTRDLRAKEVSLG-------------- 186

Query: 190 SFGSSLGFPRIAVAGAKPAFFAPRMR-----------EKVRGKNMFSLCEVQKWRTHSIL 249
             GS LG P IAVAGAKPAFFA RM+             +RG+N FS  E Q+W+T S  
Sbjct: 187 PLGSFLGLPSIAVAGAKPAFFAFRMKGPSSLTGRERLSPLRGENTFSQSEGQRWKTQS-- 246

Query: 250 WAHRMKRKAVLDWWSFRRQHTNGLVGGAEHNESKPKTDQGSLP 251
                +RK+++  WS   +  NGL+  A     K +  + + P
Sbjct: 247 --GAPRRKSLVLSWSQGPKARNGLMISAHDIGKKDRRPEMAGP 253

[Close]

BLAST of CmaCh11G012190 vs. TrEMBL
Match: D5I3E9_CUCPE (Ribosomal protein L2 OS=Cucurbita pepo GN=rpl2 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 4.9e-123
Identity = 236/296 (79.73%), Postives = 243/296 (82.09%), Query Frame = 1


Query: 5   MRQSQEGRALRQFTWSIEKSAGRNSLG------------------------------QRI 64
           MRQSQEGRALRQFT S  KSAGRNS G                              +RI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 60

Query: 65  DYDSNRSSRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKVDQR 124
           +YD NRSSRI  VRWIEGVRQRKCKTIEEFAP RKILEPTTTTI  LFSFSS PGKVDQR
Sbjct: 61  EYDPNRSSRIALVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSTPGKVDQR 120

Query: 125 KVACFSPRRMVAYVVAGLPTRMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQKTKGE 184
           KVACFSP +M AYVV GLPTR+PPCSKSPF  TSKGAGSKKTCAKDVFFSAFSSQKTKGE
Sbjct: 121 KVACFSPGQMAAYVVVGLPTRIPPCSKSPF--TSKGAGSKKTCAKDVFFSAFSSQKTKGE 180

Query: 185 TASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAHRMKR 244
           TASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKN FSLCEV+KWRTHSILWAHRMKR
Sbjct: 181 TASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNTFSLCEVRKWRTHSILWAHRMKR 240

Query: 245 KAVLDWWSFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGEGPKDGACKVNHAPV 271
           KA LDW SFRRQ T+GLVGGAEHNESKP+TD  SLPAKPIGEGPKDGACKVN APV
Sbjct: 241 KAALDWQSFRRQETDGLVGGAEHNESKPETDPASLPAKPIGEGPKDGACKVNRAPV 294

[Close]

BLAST of CmaCh11G012190 vs. TrEMBL
Match: D5I399_CITLA (Ribosomal protein L2 OS=Citrullus lanatus GN=rpl2 PE=4 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 5.4e-122
Identity = 234/296 (79.05%), Postives = 242/296 (81.76%), Query Frame = 1


Query: 5   MRQSQEGRALRQFTWSIEKSAGRNSLG------------------------------QRI 64
           MRQSQEGRALRQFT S  KSAGRNS G                              +RI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 60

Query: 65  DYDSNRSSRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKVDQR 124
           +YD NRSSRI  VRWIEGVRQRKCKTIEEFAP RKILEPTTTTI  LFSFSSPPGKVDQR
Sbjct: 61  EYDPNRSSRIALVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 120

Query: 125 KVACFSPRRMVAYVVAGLPTRMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQKTKGE 184
           KVACFSP RM AYVV GLPTRMPP SKSPF  TSKGAGSKKTCAKDVFFSAFSSQKTKGE
Sbjct: 121 KVACFSPGRMAAYVVVGLPTRMPPWSKSPF--TSKGAGSKKTCAKDVFFSAFSSQKTKGE 180

Query: 185 TASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAHRMKR 244
           TASLSFGSS GFPR+AVAGAKPAFFAPRMR+K+RGKN FSLCEV+KWRTHSILWAHR+KR
Sbjct: 181 TASLSFGSSFGFPRVAVAGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKR 240

Query: 245 KAVLDWWSFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGEGPKDGACKVNHAPV 271
           KA L W SFRRQ T GLVGGAEHNESKP+TDQGSLPAKPIGEGPKDGACKVN APV
Sbjct: 241 KAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV 294

[Close]

BLAST of CmaCh11G012190 vs. TrEMBL
Match: G3EU27_CUCME (Ribosomal protein L2 OS=Cucumis melo subsp. melo GN=rpl2 PE=4 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 2.2e-115
Identity = 227/300 (75.67%), Postives = 234/300 (78.00%), Query Frame = 1


Query: 2   ISTMRQSQEGRALRQFTWSIEKSAGRNSLG------------------------------ 61
           IST RQSQEGRALRQFT S  KSAGRNS G                              
Sbjct: 4   ISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSMGIV 63

Query: 62  QRIDYDSNRSSRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKV 121
           +RI+YD NRSSRI PVRWIEGVRQRKCKT EEFAP  +ILEPTTTTI  LFSFSSPPGKV
Sbjct: 64  ERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPPGKV 123

Query: 122 DQRKVACFSPRRMVAYVVAGLPT-RMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQK 181
           DQRKVA FSP RM AYVV GLPT RMPP SKSP T T KGAGSKKTCAKD+FFSAFSSQK
Sbjct: 124 DQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSQK 183

Query: 182 TKGETASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAH 241
           TKGETASLSFGSS  FPR+AVAGAKPAFFAPRMREKVRGK  FSLCEV+KWRTHSILWAH
Sbjct: 184 TKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAH 243

Query: 242 RMKRKAVLDWWSFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGEGPKDGACKVNHAPV 271
           RMK KA L W SFRRQ T GLVGGAEH ESK + DQGSLPAKPIGEGPKDGACKVN  PV
Sbjct: 244 RMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVNRVPV 303

[Close]

BLAST of CmaCh11G012190 vs. TrEMBL
Match: G3EIZ1_CUCSA (Ribosomal protein L2 OS=Cucumis sativus GN=rpl2 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 4.9e-115
Identity = 226/300 (75.33%), Postives = 234/300 (78.00%), Query Frame = 1


Query: 2   ISTMRQSQEGRALRQFTWSIEKSAGRNSLG------------------------------ 61
           IST RQSQEGRALRQFT S  KSAGRNS G                              
Sbjct: 4   ISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHLGGGSKRLQRRIDLKRSTSSMGIV 63

Query: 62  QRIDYDSNRSSRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKV 121
           +RI+YD NRSSRI PVRWIEGVRQRKCKT EEFAP  +ILEPTTTTI  LFSFSSPPGKV
Sbjct: 64  ERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPKPQILEPTTTTIRGLFSFSSPPGKV 123

Query: 122 DQRKVACFSPRRMVAYVVAGLPT-RMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQK 181
           DQRKVA FSP RM AYVV GLPT RMPP S+SP T T KGAGSKKTCAKD+FFSAFSSQK
Sbjct: 124 DQRKVASFSPGRMAAYVVVGLPTTRMPPWSRSPDTSTRKGAGSKKTCAKDLFFSAFSSQK 183

Query: 182 TKGETASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAH 241
           TKGETASLSFGSS  FPR+AVAGAKPAFFAPRMREKVRGK  FSLCEV+KWRTHSILWAH
Sbjct: 184 TKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAH 243

Query: 242 RMKRKAVLDWWSFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGEGPKDGACKVNHAPV 271
           RMK KA L W SFRRQ T GLVGGAEH ESK + DQGSLPAKPIGEGPKDGACKVN  PV
Sbjct: 244 RMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVNRVPV 303

[Close]

BLAST of CmaCh11G012190 vs. TrEMBL
Match: A5BK62_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029794 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 6.0e-113
Identity = 228/300 (76.00%), Postives = 235/300 (78.33%), Query Frame = 1


Query: 5   MRQSQEGRALRQFTWSIEKSAGRNSLGQ---------------RID-------------- 64
           MRQSQEGRALRQFT S  KSAGRNS G+               RID              
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVEWI 60

Query: 65  -YDSNRSSRIPPVRWIEGV---RQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKV 124
            YD NRSSRI PVRWIEGV   RQRKC TIEEFAP RKILEPTTTTI  LFSFSS PGKV
Sbjct: 61  EYDPNRSSRIAPVRWIEGVQLRRQRKCNTIEEFAPPRKILEPTTTTIRGLFSFSSLPGKV 120

Query: 125 DQRKVACFSPRRMVAYVVAGLPTRMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQKT 184
           DQRKVACFSP  M AYVV GLPTRMPP SKSPFT  SKGAGSKKTCAKDVFFSAFSS K 
Sbjct: 121 DQRKVACFSPGPMAAYVVVGLPTRMPPWSKSPFT--SKGAGSKKTCAKDVFFSAFSSPKA 180

Query: 185 KGETASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAHR 244
           KGET+SLSFGSS GFPRIAVAGAKPAFFAPRMREK+RGKN FSLCEV+KWRTHSILWAHR
Sbjct: 181 KGETSSLSFGSSFGFPRIAVAGAKPAFFAPRMREKLRGKNTFSLCEVRKWRTHSILWAHR 240

Query: 245 MKRKAVLDWWSFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGEGPKDGACKVNHAPVV 272
           +KRKA L W SFRRQ T GLVG AEHNESKPKTDQG   +KPIGEGPKDGACKV+ APVV
Sbjct: 241 IKRKAALSWQSFRRQETLGLVGAAEHNESKPKTDQGFY-SKPIGEGPKDGACKVDRAPVV 297

[Close]

BLAST of CmaCh11G012190 vs. TAIR10
Match: ATMG00560.1 (ATMG00560.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 345.5 bits (885), Expect = 2.9e-95
Identity = 194/300 (64.67%), Postives = 208/300 (69.33%), Query Frame = 1


Query: 12  RALRQFTWSIEKSAGRNSLG------------------------------QRIDYDSNRS 71
           RALRQFT S  KSAGRNS G                              + I+YD NRS
Sbjct: 7   RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPNRS 66

Query: 72  SRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKVDQRKVACFSP 131
           S+I PVRWI+G  Q+K  TIE+FAP RKILEPTT TI  LFSFS  PGKVD+RKVACFSP
Sbjct: 67  SQIAPVRWIKGGCQKKMNTIEKFAPPRKILEPTTNTISGLFSFSFLPGKVDKRKVACFSP 126

Query: 132 RRMVAYVVAGLPTRMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFG 191
             M AYVV GLPT MPP S S     SKGAGS KT  KDVFFSAFSS K K ETASL+F 
Sbjct: 127 GLMAAYVVVGLPTGMPPLSSSKSAFASKGAGSTKTLVKDVFFSAFSSPKAKRETASLAFA 186

Query: 192 SSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAHRMKRKAVLDWW 251
           SS GFPRIAVAGAKPAFFAPRMR+KVRGK+ FSLCEVQK RTHSILWAHR+K KA L W 
Sbjct: 187 SSFGFPRIAVAGAKPAFFAPRMRQKVRGKSTFSLCEVQKGRTHSILWAHRIKGKAGLSWQ 246

Query: 252 SFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGE-----------GPKDGACKVNHAPV 271
           SFRRQ T GLVG A H +SKPKTDQG+LPAKPIGE             KDGACKV+ APV
Sbjct: 247 SFRRQDTLGLVGAAGHKKSKPKTDQGNLPAKPIGERAKQLKALRGLRAKDGACKVDRAPV 306

[Close]

BLAST of CmaCh11G012190 vs. TAIR10
Match: AT2G07715.1 (AT2G07715.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 339.3 bits (869), Expect = 2.1e-93
Identity = 191/296 (64.53%), Postives = 205/296 (69.26%), Query Frame = 1


Query: 12  RALRQFTWSIEKSAGRNSLG------------------------------QRIDYDSNRS 71
           RALRQFT S  KSAGRNS G                              + I+YD NRS
Sbjct: 7   RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPNRS 66

Query: 72  SRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKVDQRKVACFSP 131
           S+I PVRWI+G  Q+K  TIE+FAP RKILEPTT TI  LFSFS  PGKVD+RKVACFSP
Sbjct: 67  SQIAPVRWIKGGCQKKMNTIEKFAPPRKILEPTTNTISGLFSFSFLPGKVDKRKVACFSP 126

Query: 132 RRMVAYVVAGLPTRMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQKTKGETASLSFG 191
             M AYVV GLPT MPP S S     SKGAGS KT  KDVFFSAFSS K K ETASL+F 
Sbjct: 127 GLMAAYVVVGLPTGMPPLSSSKSAFASKGAGSTKTLVKDVFFSAFSSLKAKRETASLAFA 186

Query: 192 SSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAHRMKRKAVLDWW 251
           SS GFPRIAVAGAKPAFFAPRMR+KVRGK+ FSLCEVQK RTHSILWAHR+K KA L W 
Sbjct: 187 SSFGFPRIAVAGAKPAFFAPRMRQKVRGKSTFSLCEVQKGRTHSILWAHRIKGKAGLSWQ 246

Query: 252 SFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGE-----------GPKDGACKVN 267
           SFRRQ T GLVG A H +SKPKTDQG+LPAKPIGE             KDGACKV+
Sbjct: 247 SFRRQDTLGLVGAAGHKKSKPKTDQGNLPAKPIGERAKQLKALRGLRAKDGACKVD 302

[Close]

BLAST of CmaCh11G012190 vs. NCBI nr
Match: gi|295311698|ref|YP_003587363.1| (ribosomal protein L2 [Cucurbita pepo])

HSP 1 Score: 448.7 bits (1153), Expect = 7.0e-123
Identity = 236/296 (79.73%), Postives = 243/296 (82.09%), Query Frame = 1


Query: 5   MRQSQEGRALRQFTWSIEKSAGRNSLG------------------------------QRI 64
           MRQSQEGRALRQFT S  KSAGRNS G                              +RI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 60

Query: 65  DYDSNRSSRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKVDQR 124
           +YD NRSSRI  VRWIEGVRQRKCKTIEEFAP RKILEPTTTTI  LFSFSS PGKVDQR
Sbjct: 61  EYDPNRSSRIALVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSTPGKVDQR 120

Query: 125 KVACFSPRRMVAYVVAGLPTRMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQKTKGE 184
           KVACFSP +M AYVV GLPTR+PPCSKSPF  TSKGAGSKKTCAKDVFFSAFSSQKTKGE
Sbjct: 121 KVACFSPGQMAAYVVVGLPTRIPPCSKSPF--TSKGAGSKKTCAKDVFFSAFSSQKTKGE 180

Query: 185 TASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAHRMKR 244
           TASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKN FSLCEV+KWRTHSILWAHRMKR
Sbjct: 181 TASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNTFSLCEVRKWRTHSILWAHRMKR 240

Query: 245 KAVLDWWSFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGEGPKDGACKVNHAPV 271
           KA LDW SFRRQ T+GLVGGAEHNESKP+TD  SLPAKPIGEGPKDGACKVN APV
Sbjct: 241 KAALDWQSFRRQETDGLVGGAEHNESKPETDPASLPAKPIGEGPKDGACKVNRAPV 294

[Close]

BLAST of CmaCh11G012190 vs. NCBI nr
Match: gi|295311655|ref|YP_003587229.1| (ribosomal protein L2 [Citrullus lanatus])

HSP 1 Score: 445.3 bits (1144), Expect = 7.8e-122
Identity = 234/296 (79.05%), Postives = 242/296 (81.76%), Query Frame = 1


Query: 5   MRQSQEGRALRQFTWSIEKSAGRNSLG------------------------------QRI 64
           MRQSQEGRALRQFT S  KSAGRNS G                              +RI
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVERI 60

Query: 65  DYDSNRSSRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKVDQR 124
           +YD NRSSRI  VRWIEGVRQRKCKTIEEFAP RKILEPTTTTI  LFSFSSPPGKVDQR
Sbjct: 61  EYDPNRSSRIALVRWIEGVRQRKCKTIEEFAPPRKILEPTTTTIRGLFSFSSPPGKVDQR 120

Query: 125 KVACFSPRRMVAYVVAGLPTRMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQKTKGE 184
           KVACFSP RM AYVV GLPTRMPP SKSPF  TSKGAGSKKTCAKDVFFSAFSSQKTKGE
Sbjct: 121 KVACFSPGRMAAYVVVGLPTRMPPWSKSPF--TSKGAGSKKTCAKDVFFSAFSSQKTKGE 180

Query: 185 TASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAHRMKR 244
           TASLSFGSS GFPR+AVAGAKPAFFAPRMR+K+RGKN FSLCEV+KWRTHSILWAHR+KR
Sbjct: 181 TASLSFGSSFGFPRVAVAGAKPAFFAPRMRDKLRGKNTFSLCEVRKWRTHSILWAHRIKR 240

Query: 245 KAVLDWWSFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGEGPKDGACKVNHAPV 271
           KA L W SFRRQ T GLVGGAEHNESKP+TDQGSLPAKPIGEGPKDGACKVN APV
Sbjct: 241 KAALSWRSFRRQETLGLVGGAEHNESKPETDQGSLPAKPIGEGPKDGACKVNRAPV 294

[Close]

BLAST of CmaCh11G012190 vs. NCBI nr
Match: gi|345034425|gb|AEN56111.1| (ribosomal protein L2 [Cucumis melo subsp. melo])

HSP 1 Score: 423.3 bits (1087), Expect = 3.2e-115
Identity = 227/300 (75.67%), Postives = 234/300 (78.00%), Query Frame = 1


Query: 2   ISTMRQSQEGRALRQFTWSIEKSAGRNSLG------------------------------ 61
           IST RQSQEGRALRQFT S  KSAGRNS G                              
Sbjct: 4   ISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFRLGGGSKRLQRRIDLKRSTSSMGIV 63

Query: 62  QRIDYDSNRSSRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKV 121
           +RI+YD NRSSRI PVRWIEGVRQRKCKT EEFAP  +ILEPTTTTI  LFSFSSPPGKV
Sbjct: 64  ERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPQPQILEPTTTTIRGLFSFSSPPGKV 123

Query: 122 DQRKVACFSPRRMVAYVVAGLPT-RMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQK 181
           DQRKVA FSP RM AYVV GLPT RMPP SKSP T T KGAGSKKTCAKD+FFSAFSSQK
Sbjct: 124 DQRKVASFSPGRMAAYVVVGLPTTRMPPWSKSPDTSTRKGAGSKKTCAKDLFFSAFSSQK 183

Query: 182 TKGETASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAH 241
           TKGETASLSFGSS  FPR+AVAGAKPAFFAPRMREKVRGK  FSLCEV+KWRTHSILWAH
Sbjct: 184 TKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAH 243

Query: 242 RMKRKAVLDWWSFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGEGPKDGACKVNHAPV 271
           RMK KA L W SFRRQ T GLVGGAEH ESK + DQGSLPAKPIGEGPKDGACKVN  PV
Sbjct: 244 RMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVNRVPV 303

[Close]

BLAST of CmaCh11G012190 vs. NCBI nr
Match: gi|346683377|ref|YP_004849339.1| (ribosomal protein L2 [Cucumis sativus])

HSP 1 Score: 422.2 bits (1084), Expect = 7.0e-115
Identity = 226/300 (75.33%), Postives = 234/300 (78.00%), Query Frame = 1


Query: 2   ISTMRQSQEGRALRQFTWSIEKSAGRNSLG------------------------------ 61
           IST RQSQEGRALRQFT S  KSAGRNS G                              
Sbjct: 4   ISTKRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHLGGGSKRLQRRIDLKRSTSSMGIV 63

Query: 62  QRIDYDSNRSSRIPPVRWIEGVRQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKV 121
           +RI+YD NRSSRI PVRWIEGVRQRKCKT EEFAP  +ILEPTTTTI  LFSFSSPPGKV
Sbjct: 64  ERIEYDPNRSSRIHPVRWIEGVRQRKCKTQEEFAPKPQILEPTTTTIRGLFSFSSPPGKV 123

Query: 122 DQRKVACFSPRRMVAYVVAGLPT-RMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQK 181
           DQRKVA FSP RM AYVV GLPT RMPP S+SP T T KGAGSKKTCAKD+FFSAFSSQK
Sbjct: 124 DQRKVASFSPGRMAAYVVVGLPTTRMPPWSRSPDTSTRKGAGSKKTCAKDLFFSAFSSQK 183

Query: 182 TKGETASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAH 241
           TKGETASLSFGSS  FPR+AVAGAKPAFFAPRMREKVRGK  FSLCEV+KWRTHSILWAH
Sbjct: 184 TKGETASLSFGSSFAFPRVAVAGAKPAFFAPRMREKVRGKKTFSLCEVRKWRTHSILWAH 243

Query: 242 RMKRKAVLDWWSFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGEGPKDGACKVNHAPV 271
           RMK KA L W SFRRQ T GLVGGAEH ESK + DQGSLPAKPIGEGPKDGACKVN  PV
Sbjct: 244 RMKGKAALSWRSFRRQETLGLVGGAEHKESKAERDQGSLPAKPIGEGPKDGACKVNRVPV 303

[Close]

BLAST of CmaCh11G012190 vs. NCBI nr
Match: gi|147791171|emb|CAN61455.1| (hypothetical protein VITISV_029794 [Vitis vinifera])

HSP 1 Score: 415.2 bits (1066), Expect = 8.6e-113
Identity = 228/300 (76.00%), Postives = 235/300 (78.33%), Query Frame = 1


Query: 5   MRQSQEGRALRQFTWSIEKSAGRNSLGQ---------------RID-------------- 64
           MRQSQEGRALRQFT S  KSAGRNS G+               RID              
Sbjct: 1   MRQSQEGRALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRRIDLKRSTSSMGIVEWI 60

Query: 65  -YDSNRSSRIPPVRWIEGV---RQRKCKTIEEFAPLRKILEPTTTTIHDLFSFSSPPGKV 124
            YD NRSSRI PVRWIEGV   RQRKC TIEEFAP RKILEPTTTTI  LFSFSS PGKV
Sbjct: 61  EYDPNRSSRIAPVRWIEGVQLRRQRKCNTIEEFAPPRKILEPTTTTIRGLFSFSSLPGKV 120

Query: 125 DQRKVACFSPRRMVAYVVAGLPTRMPPCSKSPFTITSKGAGSKKTCAKDVFFSAFSSQKT 184
           DQRKVACFSP  M AYVV GLPTRMPP SKSPFT  SKGAGSKKTCAKDVFFSAFSS K 
Sbjct: 121 DQRKVACFSPGPMAAYVVVGLPTRMPPWSKSPFT--SKGAGSKKTCAKDVFFSAFSSPKA 180

Query: 185 KGETASLSFGSSLGFPRIAVAGAKPAFFAPRMREKVRGKNMFSLCEVQKWRTHSILWAHR 244
           KGET+SLSFGSS GFPRIAVAGAKPAFFAPRMREK+RGKN FSLCEV+KWRTHSILWAHR
Sbjct: 181 KGETSSLSFGSSFGFPRIAVAGAKPAFFAPRMREKLRGKNTFSLCEVRKWRTHSILWAHR 240

Query: 245 MKRKAVLDWWSFRRQHTNGLVGGAEHNESKPKTDQGSLPAKPIGEGPKDGACKVNHAPVV 272
           +KRKA L W SFRRQ T GLVG AEHNESKPKTDQG   +KPIGEGPKDGACKV+ APVV
Sbjct: 241 IKRKAALSWQSFRRQETLGLVGAAEHNESKPKTDQGFY-SKPIGEGPKDGACKVDRAPVV 297

The following BLAST results are available for this feature:

BLAST of CmaCh11G012190 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RM02_ARATH	5.2e-94	64.67	60S ribosomal protein L2, mitochondrial OS=Arabidopsis thaliana GN=RPL2 PE=3 SV=...	[more]
RM02_ORYSA	7.7e-45	44.01	60S ribosomal protein L2, mitochondrial OS=Oryza sativa GN=RPL2 PE=3 SV=1	[more]
RM02_ORYSI	7.7e-45	44.01	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica GN=RPL2 PE...	[more]
RM02_ORYSJ	7.7e-45	44.01	60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica GN=RPL2 ...	[more]
RM02_MARPO	1.3e-12	30.74	60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha GN=RPL2 PE=3 SV...	[more]

BLAST of CmaCh11G012190 vs. TrEMBL


Match Name	E-value	Identity	Description
D5I3E9_CUCPE	4.9e-123	79.73	Ribosomal protein L2 OS=Cucurbita pepo GN=rpl2 PE=4 SV=1	[more]
D5I399_CITLA	5.4e-122	79.05	Ribosomal protein L2 OS=Citrullus lanatus GN=rpl2 PE=4 SV=1	[more]
G3EU27_CUCME	2.2e-115	75.67	Ribosomal protein L2 OS=Cucumis melo subsp. melo GN=rpl2 PE=4 SV=1	[more]
G3EIZ1_CUCSA	4.9e-115	75.33	Ribosomal protein L2 OS=Cucumis sativus GN=rpl2 PE=4 SV=1	[more]
A5BK62_VITVI	6.0e-113	76.00	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029794 PE=4 SV=1	[more]

BLAST of CmaCh11G012190 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00560.1	2.9e-95	64.67	ATMG00560.1 Nucleic acid-binding, OB-fold-like protein	[more]
AT2G07715.1	2.1e-93	64.53	Nucleic acid-binding, OB-fold-like protein	[more]

BLAST of CmaCh11G012190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|295311698\|ref\|YP_003587363.1\|	7.0e-123	79.73	ribosomal protein L2 [Cucurbita pepo]	[more]
gi\|295311655\|ref\|YP_003587229.1\|	7.8e-122	79.05	ribosomal protein L2 [Citrullus lanatus]	[more]
gi\|345034425\|gb\|AEN56111.1\|	3.2e-115	75.67	ribosomal protein L2 [Cucumis melo subsp. melo]	[more]
gi\|346683377\|ref\|YP_004849339.1\|	7.0e-115	75.33	ribosomal protein L2 [Cucumis sativus]	[more]
gi\|147791171\|emb\|CAN61455.1\|	8.6e-113	76.00	hypothetical protein VITISV_029794 [Vitis vinifera]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G012190.1	CmaCh11G012190.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G012190	Watermelon (97103) v2	cmawmbB117
CmaCh11G012190	Wax gourd	cmawgoB0171
CmaCh11G012190	Cucumber (Gy14) v1	cgycmaB0055
CmaCh11G012190	Wild cucumber (PI 183967)	cmacpiB105
CmaCh11G012190	Cucumber (Chinese Long) v2	cmacuB106
CmaCh11G012190	Melon (DHL92) v3.5.1	cmameB108
CmaCh11G012190	Watermelon (Charleston Gray)	cmawcgB114
CmaCh11G012190	Watermelon (97103) v1	cmawmB101
CmaCh11G012190	Bottle gourd (USVL1VR-Ls)	cmalsiB133
CmaCh11G012190	Bottle gourd (USVL1VR-Ls)	cmalsiB142
CmaCh11G012190	Melon (DHL92) v3.6.1	cmamedB116
CmaCh11G012190	Cucumber (Chinese Long) v3	cmacucB0120