CmaCh11G012160 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh11G012160
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRibosomal protein small subunit 7
LocationCma_Chr11 : 7715043 .. 7715423 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGTACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGATGCCGTAGACAATATAAAGCCCATATGCGAAGTTGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTGCCTGGGATTGTAGCAAGGGATCGTCAACAAACCTTAGCTATTCATTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTATAGGATAAGCTTAGAGAAATTTTTGTTTGCTGAGATACTTGATGCTTACAGAAAGAGGGGAATTGCACGTTAG

mRNA sequence

ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGTACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGATGCCGTAGACAATATAAAGCCCATATGCGAAGTTGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTGCCTGGGATTGTAGCAAGGGATCGTCAACAAACCTTAGCTATTCATTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTATAGGATAAGCTTAGAGAAATTTTTGTTTGCTGAGATACTTGATGCTTACAGAAAGAGGGGAATTGCACGTTAG

Coding sequence (CDS)

ATGGGGGGCTTGGATGGTGAGCAAAAACAATTGATCAAGAAGTTGGTCAACTTTCGCATGAAAGAAGGTAAAAGTACGAGAGTTCGTGCTATTGTTTATCAAACTTTTCATCGCCCAGCTCAAACTGAACGCGATGTAATCAAACTGATGGTTGATGCCGTAGACAATATAAAGCCCATATGCGAAGTTGAAAAAGTAGGAGTAGCAGGTACTATTTATGATGTGCCTGGGATTGTAGCAAGGGATCGTCAACAAACCTTAGCTATTCATTGGATCCTTGAAGCTGCTTTCAAACGACGTATAAGCTATAGGATAAGCTTAGAGAAATTTTTGTTTGCTGAGATACTTGATGCTTACAGAAAGAGGGGAATTGCACGTTAG

Protein sequence

MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYRKRGIAR
Homology
[Close]
BLAST of CmaCh11G012160 vs. Swiss-Prot
Match: RT07_ARATH (Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana GN=RPS7 PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 6.3e-58
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQK LIKKLVNFRMKEGK TRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 121 KRGIAR 127
           KRG AR
Sbjct: 121 KRGSAR 126

[Close]
BLAST of CmaCh11G012160 vs. Swiss-Prot
Match: RT07_BETVU (Ribosomal protein S7, mitochondrial OS=Beta vulgaris GN=RPS7 PE=2 SV=2)

HSP 1 Score: 215.3 bits (547), Expect = 3.8e-55
Identity = 111/126 (88.10%), Postives = 117/126 (92.86%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLD EQKQLIKKLVNF MKEGK T+VRAIVYQTFHR A+TE DVIKLM+DAV+NIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFHMKEGKRTKVRAIVYQTFHRLARTEGDVIKLMIDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           C+VEKV VAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK LF EILDAYR
Sbjct: 61  CKVEKVRVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFDEILDAYR 120

Query: 121 KRGIAR 127
           KRGI+R
Sbjct: 121 KRGISR 126

[Close]
BLAST of CmaCh11G012160 vs. Swiss-Prot
Match: RT07_WHEAT (Ribosomal protein S7, mitochondrial OS=Triticum aestivum GN=RPS7 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.4e-54
Identity = 111/126 (88.10%), Postives = 116/126 (92.06%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MG  DGEQK+LIKKLVNFRM +GK TRVRAIVY+TFHR A+TERDVIKLMVDAVDNIKPI
Sbjct: 1   MGDFDGEQKELIKKLVNFRMIDGKRTRVRAIVYKTFHRLARTERDVIKLMVDAVDNIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAI WIL AAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVVKVGVAGTIYDVPGIVARDRQQTLAIRWILGAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGI+R
Sbjct: 121 KRGISR 126

[Close]
BLAST of CmaCh11G012160 vs. Swiss-Prot
Match: RT07_MARPO (Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha GN=RPS7 PE=3 SV=2)

HSP 1 Score: 139.8 bits (351), Expect = 2.0e-32
Identity = 76/125 (60.80%), Postives = 101/125 (80.80%), Query Frame = 1 

Query: 3   GLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPICE 62
           GL+G+QKQLIKKLV+  M +GK TR RAIVY+TFHR A    DVIKL+V+A++N+KPICE
Sbjct: 85  GLNGKQKQLIKKLVHICMIDGKKTRSRAIVYKTFHRLAP-HGDVIKLLVNAIENVKPICE 144

Query: 63  VEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYR-ISLEKFLFAEILDAYRK 122
           V+KV ++GT   VP I+A +RQ+TLAI W+LE+A KRR+  + ISL++ L+AEIL+A +K
Sbjct: 145 VKKVRISGTTRLVPSIIATNRQETLAIRWMLESAAKRRMGKKSISLDQCLYAEILEASQK 204

Query: 123 RGIAR 127
            GIAR
Sbjct: 205 MGIAR 208

[Close]
BLAST of CmaCh11G012160 vs. Swiss-Prot
Match: RS7_PERMH (30S ribosomal protein S7 OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=rpsG PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 4.0e-12
Identity = 44/116 (37.93%), Postives = 64/116 (55.17%), Query Frame = 1 

Query: 11  LIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQ-TERDVIKLMVDAVDNIKPICEVEKVGVA 70
           L+ KL+N  MK+GK ++   IVY      A+ T  D +  +  A++NIKP+ EV    V 
Sbjct: 22  LVHKLINKVMKDGKKSKAEKIVYTAMKNLAEKTGDDPLTALHKAIENIKPVLEVRPRRVG 81

Query: 71  GTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYRKRGIA 126
           G+ Y VP  V   RQ +LA+ W++EAA  R      ++ + L  E+ DAY  RG A
Sbjct: 82  GSTYQVPMEVPPRRQISLALRWLVEAARNRSGKGNYTMIEKLTNELFDAYNNRGAA 137

[Close]
BLAST of CmaCh11G012160 vs. TrEMBL
Match: A0A142BZ01_ZIZJJ (Ribosomal protein S7 OS=Ziziphus jujuba GN=rps7 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 5.2e-59
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]
BLAST of CmaCh11G012160 vs. TrEMBL
Match: A0A0M4R6T5_CANSA (Ribosomal protein S7 OS=Cannabis sativa GN=rps7 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 5.2e-59
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]
BLAST of CmaCh11G012160 vs. TrEMBL
Match: D5I3F4_CUCPE (Ribosomal protein S7 OS=Cucurbita pepo GN=rps7 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 8.8e-59
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHR AQTERDVIKLMVDAVDNIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVDNIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGT+YDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK LFAEILDAYR
Sbjct: 61  CEVEKVGVAGTLYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]
BLAST of CmaCh11G012160 vs. TrEMBL
Match: D5I3C7_CITLA (Ribosomal protein S7 OS=Citrullus lanatus GN=rps7 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-58
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHR AQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK LFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]
BLAST of CmaCh11G012160 vs. TrEMBL
Match: A0A0M4MPL4_9MAGN (Ribosomal protein S7 OS=Heuchera parviflora var. saurensis GN=rps7 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 7.4e-58
Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLD EQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]
BLAST of CmaCh11G012160 vs. TAIR10
Match: AT2G07696.1 (AT2G07696.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 224.6 bits (571), Expect = 3.5e-59
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQK LIKKLVNFRMKEGK TRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 121 KRGIAR 127
           KRG AR
Sbjct: 121 KRGSAR 126

[Close]
BLAST of CmaCh11G012160 vs. TAIR10
Match: ATMG01270.1 (ATMG01270.1 mitochondrial ribosomal protein S7)

HSP 1 Score: 224.6 bits (571), Expect = 3.5e-59
Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQK LIKKLVNFRMKEGK TRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKLLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEV KVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAY+
Sbjct: 61  CEVAKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYQ 120

Query: 121 KRGIAR 127
           KRG AR
Sbjct: 121 KRGSAR 126

[Close]
BLAST of CmaCh11G012160 vs. NCBI nr
Match: gi|1016880331|ref|YP_009243658.1| (ribosomal protein S7 (mitochondrion) [Cannabis sativa])

HSP 1 Score: 235.0 bits (598), Expect = 7.4e-59
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]
BLAST of CmaCh11G012160 vs. NCBI nr
Match: gi|1016470801|ref|YP_009241662.1| (ribosomal protein S7 (mitochondrion) [Ziziphus jujuba])

HSP 1 Score: 235.0 bits (598), Expect = 7.4e-59
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPAQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]
BLAST of CmaCh11G012160 vs. NCBI nr
Match: gi|295311708|ref|YP_003587368.1| (ribosomal protein S7 [Cucurbita pepo])

HSP 1 Score: 234.2 bits (596), Expect = 1.3e-58
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHR AQTERDVIKLMVDAVDNIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVDNIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGT+YDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK LFAEILDAYR
Sbjct: 61  CEVEKVGVAGTLYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]
BLAST of CmaCh11G012160 vs. NCBI nr
Match: gi|295311664|ref|YP_003587257.1| (ribosomal protein S7 [Citrullus lanatus])

HSP 1 Score: 233.4 bits (594), Expect = 2.2e-58
Identity = 121/126 (96.03%), Postives = 122/126 (96.83%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLDGEQKQLIKKLVNFRMKEGK TRVRAIVYQTFHR AQTERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDGEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRLAQTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK LFAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCLFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

[Close]
BLAST of CmaCh11G012160 vs. NCBI nr
Match: gi|927682212|gb|ALE29224.1| (ribosomal protein S7 (mitochondrion) [Heuchera parviflora var. saurensis])

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-57
Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 1 

Query: 1   MGGLDGEQKQLIKKLVNFRMKEGKSTRVRAIVYQTFHRPAQTERDVIKLMVDAVDNIKPI 60
           MGGLD EQKQLIKKLVNFRMKEGK TRVRAIVYQTFHRPA+TERDVIKLMVDAV+NIKPI
Sbjct: 1   MGGLDSEQKQLIKKLVNFRMKEGKRTRVRAIVYQTFHRPARTERDVIKLMVDAVENIKPI 60

Query: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIHWILEAAFKRRISYRISLEKFLFAEILDAYR 120
           CEVEKVGVAGTIYDVPGIVARDRQQTLAI WILEAAFKRRISYRISLEK  FAEILDAYR
Sbjct: 61  CEVEKVGVAGTIYDVPGIVARDRQQTLAIRWILEAAFKRRISYRISLEKCSFAEILDAYR 120

Query: 121 KRGIAR 127
           KRGIAR
Sbjct: 121 KRGIAR 126

The following BLAST results are available for this feature:
BLAST of CmaCh11G012160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RT07_ARATH6.3e-5892.06Ribosomal protein S7, mitochondrial OS=Arabidopsis thaliana GN=RPS7 PE=2 SV=1[more]
RT07_BETVU3.8e-5588.10Ribosomal protein S7, mitochondrial OS=Beta vulgaris GN=RPS7 PE=2 SV=2[more]
RT07_WHEAT1.4e-5488.10Ribosomal protein S7, mitochondrial OS=Triticum aestivum GN=RPS7 PE=3 SV=1[more]
RT07_MARPO2.0e-3260.80Ribosomal protein S7, mitochondrial OS=Marchantia polymorpha GN=RPS7 PE=3 SV=2[more]
RS7_PERMH4.0e-1237.9330S ribosomal protein S7 OS=Persephonella marina (strain DSM 14350 / EX-H1) GN=r... [more]
BLAST of CmaCh11G012160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A142BZ01_ZIZJJ5.2e-5996.03Ribosomal protein S7 OS=Ziziphus jujuba GN=rps7 PE=4 SV=1[more]
A0A0M4R6T5_CANSA5.2e-5996.03Ribosomal protein S7 OS=Cannabis sativa GN=rps7 PE=4 SV=1[more]
D5I3F4_CUCPE8.8e-5996.03Ribosomal protein S7 OS=Cucurbita pepo GN=rps7 PE=4 SV=1[more]
D5I3C7_CITLA1.5e-5896.03Ribosomal protein S7 OS=Citrullus lanatus GN=rps7 PE=4 SV=1[more]
A0A0M4MPL4_9MAGN7.4e-5894.44Ribosomal protein S7 OS=Heuchera parviflora var. saurensis GN=rps7 PE=4 SV=1[more]
BLAST of CmaCh11G012160 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G07696.13.5e-5992.06 Ribosomal protein S7p/S5e family protein[more]
ATMG01270.13.5e-5992.06ATMG01270.1 mitochondrial ribosomal protein S7[more]
BLAST of CmaCh11G012160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1016880331|ref|YP_009243658.1|7.4e-5996.03ribosomal protein S7 (mitochondrion) [Cannabis sativa][more]
gi|1016470801|ref|YP_009241662.1|7.4e-5996.03ribosomal protein S7 (mitochondrion) [Ziziphus jujuba][more]
gi|295311708|ref|YP_003587368.1|1.3e-5896.03ribosomal protein S7 [Cucurbita pepo][more]
gi|295311664|ref|YP_003587257.1|2.2e-5896.03ribosomal protein S7 [Citrullus lanatus][more]
gi|927682212|gb|ALE29224.1|1.1e-5794.44ribosomal protein S7 (mitochondrion) [Heuchera parviflora var. saurensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000235Ribosomal_S5/S7
IPR023798Ribosomal_S7_dom
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G012160.1CmaCh11G012160.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 3..126
score: 5.7
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 10..126
score: 2.8
IPR023798Ribosomal protein S7 domainGENE3DG3DSA:1.10.455.10coord: 7..125
score: 3.5
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 8..125
score: 5.5
IPR023798Ribosomal protein S7 domainunknownSSF47973Ribosomal protein S7coord: 9..124
score: 1.44
NoneNo IPR availablePANTHERPTHR11205:SF23RIBOSOMAL PROTEIN S7, MITOCHONDRIALcoord: 10..126
score: 2.8

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh11G012160Watermelon (97103) v2cmawmbB117
CmaCh11G012160Wax gourdcmawgoB0171
CmaCh11G012160Cucumber (Gy14) v1cgycmaB0055
CmaCh11G012160Wild cucumber (PI 183967)cmacpiB105
CmaCh11G012160Cucumber (Chinese Long) v2cmacuB106
CmaCh11G012160Melon (DHL92) v3.5.1cmameB108
CmaCh11G012160Watermelon (Charleston Gray)cmawcgB114
CmaCh11G012160Watermelon (97103) v1cmawmB101
CmaCh11G012160Bottle gourd (USVL1VR-Ls)cmalsiB133
CmaCh11G012160Bottle gourd (USVL1VR-Ls)cmalsiB142
CmaCh11G012160Melon (DHL92) v3.6.1cmamedB116
CmaCh11G012160Cucumber (Chinese Long) v3cmacucB0120