CmaCh11G012140 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G012140
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	NADH-ubiquinone oxidoreductase chain 5
Location	Cma_Chr11 : 7516663 .. 7517018 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGATTTTTGCCGAATCCGAGTTTGCTGCTTCAACCATTACCAAACTAATACCTATTCTGTTTAGTACTTCAGGTGCTTCTATTGCGTATAATGTCAATCTTGTAGCGGATCAATTCCAACGAGCCTTTCAAACTAGTACTTTTTGTAATCGACTCTATAGCTTCTTCAATAAACGTTAGTTCTTCAATCAAGTTTTGAATGACTTTCTAGTCAGATCATTCATGCGTTTTGGATATTTAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCTCTATGGTATCTCGTACACATTCCGACGATTGGCCGAGCGAATCAGTCAACTTCAAAGTGGATTTGTT

mRNA sequence

ATGAGATTTTTGCCGAATCCGAGTGCTTCTATTGCGTATAATGTCAATCTTGTAGCGGATCAATTCCAACGAGCCTTTCAAACTAGTACTTTTTGTAATCGACTCTATAGCTTCTTCAATAAACTCAGATCATTCATGCGTTTTGGATATTTAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCTCTATGGTATCTCGTACACATTCCGACGATTGGCCGAGCGAATCAGTCAACTTCAAAGTGGATTTGTT

Coding sequence (CDS)

ATGAGATTTTTGCCGAATCCGAGTGCTTCTATTGCGTATAATGTCAATCTTGTAGCGGATCAATTCCAACGAGCCTTTCAAACTAGTACTTTTTGTAATCGACTCTATAGCTTCTTCAATAAACTCAGATCATTCATGCGTTTTGGATATTTAGTCTCATTCGAAGCTTTAGACAAAGGTGCTATTGAGATATTGGGCCTCTATGGTATCTCGTACACATTCCGACGATTGGCCGAGCGAATCAGTCAACTTCAAAGTGGATTTGTT

Protein sequence

MRFLPNPSASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNKLRSFMRFGYLVSFEALDKGAIEILGLYGISYTFRRLAERISQLQSGFV

Homology

[Close]

BLAST of CmaCh11G012140 vs. Swiss-Prot
Match: NU5M_OENBE (NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana GN=ND5 PE=2 SV=2)

HSP 1 Score: 140.6 bits (353), Expect = 8.4e-33
Identity = 75/93 (80.65%), Postives = 78/93 (83.87%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           A +AYNVNLVADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 AFLAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of CmaCh11G012140 vs. Swiss-Prot
Match: NU5M_MAIZE (NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Zea mays GN=ND5 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.1e-32
Identity = 75/93 (80.65%), Postives = 78/93 (83.87%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           AS+AYNVNLVADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 39  ASLAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 98

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSG V
Sbjct: 99  LDKGAIEILGPYGISYTFRRLAERISQLQSGSV 131

[Close]

BLAST of CmaCh11G012140 vs. Swiss-Prot
Match: NU5M_WHEAT (NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum GN=ND5 PE=3 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.1e-32
Identity = 75/93 (80.65%), Postives = 78/93 (83.87%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           AS+AYNVNLVADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 ASLAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSG V
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGSV 621

[Close]

BLAST of CmaCh11G012140 vs. Swiss-Prot
Match: NU5M_ARATH (NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana GN=ND5 PE=2 SV=3)

HSP 1 Score: 138.3 bits (347), Expect = 4.2e-32
Identity = 74/93 (79.57%), Postives = 77/93 (82.80%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           A +AYNVN VADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of CmaCh11G012140 vs. Swiss-Prot
Match: NU5M_MARPO (NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha GN=ND5 PE=3 SV=2)

HSP 1 Score: 100.5 bits (249), Expect = 9.6e-21
Identity = 54/91 (59.34%), Postives = 66/91 (72.53%), Query Frame = 1


Query: 11  IAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEALD 70
           +AY+VN V +    A +TSTF NRLY FFNK             RSF+RFGY VSF+ALD
Sbjct: 534 VAYSVNFVVNPLIFALKTSTFGNRLYCFFNKRWFFDKVFNDFLARSFLRFGYEVSFKALD 593

Query: 71  KGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           KGAIEILG YGISYT R++A++IS++QSGFV
Sbjct: 594 KGAIEILGPYGISYTIRKMAQQISKIQSGFV 624

[Close]

BLAST of CmaCh11G012140 vs. TrEMBL
Match: D7RMY6_SILLA (NADH-ubiquinone oxidoreductase chain 5 OS=Silene latifolia GN=nad5 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.1e-31
Identity = 77/93 (82.80%), Postives = 79/93 (84.95%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVFNDFLVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of CmaCh11G012140 vs. TrEMBL
Match: F4MKW5_BETVM (NADH-ubiquinone oxidoreductase chain 5 OS=Beta vulgaris subsp. maritima GN=nad5 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.4e-31
Identity = 76/93 (81.72%), Postives = 79/93 (84.95%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           AS+AYNVNLVADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 ASVAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFIVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of CmaCh11G012140 vs. TrEMBL
Match: Q9MF46_BETVU (NADH-ubiquinone oxidoreductase chain 5 OS=Beta vulgaris subsp. vulgaris GN=nad5 PE=2 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 1.4e-31
Identity = 76/93 (81.72%), Postives = 79/93 (84.95%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           AS+AYNVNLVADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 ASVAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFIVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of CmaCh11G012140 vs. TrEMBL
Match: E8ZC26_BETVM (NADH-ubiquinone oxidoreductase chain 5 OS=Beta vulgaris subsp. maritima GN=nad5 PE=3 SV=2)

HSP 1 Score: 143.3 bits (360), Expect = 1.4e-31
Identity = 76/93 (81.72%), Postives = 79/93 (84.95%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           AS+AYNVNLVADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 528 ASVAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFIVRSFLRFGYEVSFEA 587

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 588 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 620

[Close]

BLAST of CmaCh11G012140 vs. TrEMBL
Match: D5I3G8_CUCPE (NADH-ubiquinone oxidoreductase chain 5 OS=Cucurbita pepo GN=nad5 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.5e-31
Identity = 75/93 (80.65%), Postives = 78/93 (83.87%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           A +AYNVNLVADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 AFVAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYSVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of CmaCh11G012140 vs. TAIR10
Match: ATMG00060.1 (ATMG00060.1 NADH dehydrogenase subunit 5C)

HSP 1 Score: 138.3 bits (347), Expect = 2.3e-33
Identity = 74/93 (79.57%), Postives = 77/93 (82.80%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           A +AYNVN VADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of CmaCh11G012140 vs. TAIR10
Match: ATMG00513.1 (ATMG00513.1 NADH dehydrogenase 5A)

HSP 1 Score: 138.3 bits (347), Expect = 2.3e-33
Identity = 74/93 (79.57%), Postives = 77/93 (82.80%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           A +AYNVN VADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of CmaCh11G012140 vs. TAIR10
Match: ATMG00665.1 (ATMG00665.1 NADH dehydrogenase 5B)

HSP 1 Score: 138.3 bits (347), Expect = 2.3e-33
Identity = 74/93 (79.57%), Postives = 77/93 (82.80%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           A +AYNVN VADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 AFVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of CmaCh11G012140 vs. NCBI nr
Match: gi|828333979|ref|XP_012575066.1| (PREDICTED: uncharacterized protein LOC101494761 [Cicer arietinum])

HSP 1 Score: 152.9 bits (385), Expect = 2.6e-34
Identity = 80/101 (79.21%), Postives = 85/101 (84.16%), Query Frame = 1


Query: 1   MRFLPNPSASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRF 60
           MRFLPNPSAS+AYNVN VADQFQRAFQTSTFCNRLYSFFNK            ++SF+RF
Sbjct: 102 MRFLPNPSASVAYNVNPVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFLVKSFLRF 161

Query: 61  GYLVSFEALDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           GY VSFEALDKGAIEIL  YGISYTFR+LAERISQLQSGFV
Sbjct: 162 GYEVSFEALDKGAIEILSPYGISYTFRQLAERISQLQSGFV 202

[Close]

BLAST of CmaCh11G012140 vs. NCBI nr
Match: gi|307101746|ref|YP_003875478.1| (NADH dehydrogenase subunit 5 (mitochondrion) [Silene latifolia])

HSP 1 Score: 143.7 bits (361), Expect = 1.6e-31
Identity = 77/93 (82.80%), Postives = 79/93 (84.95%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVFNDFLVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of CmaCh11G012140 vs. NCBI nr
Match: gi|384939111|emb|CBL51957.2| (NADH dehydrogenase subunit 5 (mitochondrion) [Beta vulgaris subsp. maritima])

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-31
Identity = 76/93 (81.72%), Postives = 79/93 (84.95%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           AS+AYNVNLVADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 ASVAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFIVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of CmaCh11G012140 vs. NCBI nr
Match: gi|162279918|ref|NP_064039.2| (nad5 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-31
Identity = 76/93 (81.72%), Postives = 79/93 (84.95%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           AS+AYNVNLVADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 529 ASVAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFIVRSFLRFGYEVSFEA 588

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 589 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 621

[Close]

BLAST of CmaCh11G012140 vs. NCBI nr
Match: gi|345500032|emb|CBX33245.3| (NADH dehydrogenase subunit 5 (mitochondrion) [Beta vulgaris subsp. maritima])

HSP 1 Score: 143.3 bits (360), Expect = 2.1e-31
Identity = 76/93 (81.72%), Postives = 79/93 (84.95%), Query Frame = 1


Query: 9   ASIAYNVNLVADQFQRAFQTSTFCNRLYSFFNK------------LRSFMRFGYLVSFEA 68
           AS+AYNVNLVADQFQRAFQTSTFCNRLYSFFNK            +RSF+RFGY VSFEA
Sbjct: 528 ASVAYNVNLVADQFQRAFQTSTFCNRLYSFFNKRWFFDQVLNDFIVRSFLRFGYEVSFEA 587

Query: 69  LDKGAIEILGLYGISYTFRRLAERISQLQSGFV 90
           LDKGAIEILG YGISYTFRRLAERISQLQSGFV
Sbjct: 588 LDKGAIEILGPYGISYTFRRLAERISQLQSGFV 620

The following BLAST results are available for this feature:

BLAST of CmaCh11G012140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NU5M_OENBE	8.4e-33	80.65	NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera berteroana GN=ND5 PE=2 SV=2	[more]
NU5M_MAIZE	1.1e-32	80.65	NADH-ubiquinone oxidoreductase chain 5 (Fragment) OS=Zea mays GN=ND5 PE=3 SV=1	[more]
NU5M_WHEAT	1.1e-32	80.65	NADH-ubiquinone oxidoreductase chain 5 OS=Triticum aestivum GN=ND5 PE=3 SV=1	[more]
NU5M_ARATH	4.2e-32	79.57	NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis thaliana GN=ND5 PE=2 SV=3	[more]
NU5M_MARPO	9.6e-21	59.34	NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia polymorpha GN=ND5 PE=3 SV=2	[more]

BLAST of CmaCh11G012140 vs. TrEMBL


Match Name	E-value	Identity	Description
D7RMY6_SILLA	1.1e-31	82.80	NADH-ubiquinone oxidoreductase chain 5 OS=Silene latifolia GN=nad5 PE=2 SV=1	[more]
F4MKW5_BETVM	1.4e-31	81.72	NADH-ubiquinone oxidoreductase chain 5 OS=Beta vulgaris subsp. maritima GN=nad5 ...	[more]
Q9MF46_BETVU	1.4e-31	81.72	NADH-ubiquinone oxidoreductase chain 5 OS=Beta vulgaris subsp. vulgaris GN=nad5 ...	[more]
E8ZC26_BETVM	1.4e-31	81.72	NADH-ubiquinone oxidoreductase chain 5 OS=Beta vulgaris subsp. maritima GN=nad5 ...	[more]
D5I3G8_CUCPE	5.5e-31	80.65	NADH-ubiquinone oxidoreductase chain 5 OS=Cucurbita pepo GN=nad5 PE=3 SV=1	[more]

BLAST of CmaCh11G012140 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG00060.1	2.3e-33	79.57	ATMG00060.1 NADH dehydrogenase subunit 5C	[more]
ATMG00513.1	2.3e-33	79.57	ATMG00513.1 NADH dehydrogenase 5A	[more]
ATMG00665.1	2.3e-33	79.57	ATMG00665.1 NADH dehydrogenase 5B	[more]

BLAST of CmaCh11G012140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|828333979\|ref\|XP_012575066.1\|	2.6e-34	79.21	PREDICTED: uncharacterized protein LOC101494761 [Cicer arietinum]	[more]
gi\|307101746\|ref\|YP_003875478.1\|	1.6e-31	82.80	NADH dehydrogenase subunit 5 (mitochondrion) [Silene latifolia]	[more]
gi\|384939111\|emb\|CBL51957.2\|	2.1e-31	81.72	NADH dehydrogenase subunit 5 (mitochondrion) [Beta vulgaris subsp. maritima]	[more]
gi\|162279918\|ref\|NP_064039.2\|	2.1e-31	81.72	nad5 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]	[more]
gi\|345500032\|emb\|CBX33245.3\|	2.1e-31	81.72	NADH dehydrogenase subunit 5 (mitochondrion) [Beta vulgaris subsp. maritima]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:0015992	proton transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G012140.1	CmaCh11G012140.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G012140	Cucumber (Chinese Long) v3	cmacucB0120
CmaCh11G012140	Watermelon (97103) v2	cmawmbB117
CmaCh11G012140	Wax gourd	cmawgoB0171
CmaCh11G012140	Cucumber (Gy14) v1	cgycmaB0055
CmaCh11G012140	Wild cucumber (PI 183967)	cmacpiB105
CmaCh11G012140	Cucumber (Chinese Long) v2	cmacuB106
CmaCh11G012140	Melon (DHL92) v3.5.1	cmameB108
CmaCh11G012140	Watermelon (Charleston Gray)	cmawcgB114
CmaCh11G012140	Watermelon (97103) v1	cmawmB101
CmaCh11G012140	Bottle gourd (USVL1VR-Ls)	cmalsiB133
CmaCh11G012140	Bottle gourd (USVL1VR-Ls)	cmalsiB142
CmaCh11G012140	Melon (DHL92) v3.6.1	cmamedB116