CmaCh11G011710 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATGCAGCTTCCCAAAACGACGTCGCTTCCACCATCTGCAAGAAAACTAGAAACCCTTCTTTTTGCTTTAACGTGTTGAAATCTGCTGGCACCACAGACTTGAAAGGACTGGCCACCTTCACCCTCAACCTCGCCCACGACAAGGTTGCTGAAACTCGTGCCCTCGCCCAGTCCTTGACGTCCAAGGCAGCCGATCCCAAGCTTAAAGAGCGCTATGCCACCTGCGCTGAACTCTACGACAATGCCGCCGGCGACATCGAGGATGGGAAGGTCAACTTGGGGGAAGGTGACTACAATGGCGTCAACATTAAGGCATTTGCAGCCATGACGGAGGCTGGCGACTGTCTGGACAGCTTTGCGCAGCCGCCGAAGGACCCATCGGCGCTGTCGGGCAATGGCAAGACTGTTGAAGATATTTGTAGTATCATCTTGGTTATAGCCAACCTTCTTCTTGGGCGTGTCTAA ATGCATGCAGCTTCCCAAAACGACGTCGCTTCCACCATCTGCAAGAAAACTAGAAACCCTTCTTTTTGCTTTAACGTGTTGAAATCTGCTGGCACCACAGACTTGAAAGGACTGGCCACCTTCACCCTCAACCTCGCCCACGACAAGGTTGCTGAAACTCGTGCCCTCGCCCAGTCCTTGACGTCCAAGGCAGCCGATCCCAAGCTTAAAGAGCGCTATGCCACCTGCGCTGAACTCTACGACAATGCCGCCGGCGACATCGAGGATGGGAAGGTCAACTTGGGGGAAGGTGACTACAATGGCGTCAACATTAAGGCATTTGCAGCCATGACGGAGGCTGGCGACTGTCTGGACAGCTTTGCGCAGCCGCCGAAGGACCCATCGGCGCTGTCGGGCAATGGCAAGACTGTTGAAGATATTTGTAGTATCATCTTGGTTATAGCCAACCTTCTTCTTGGGCGTGTCTAA ATGCATGCAGCTTCCCAAAACGACGTCGCTTCCACCATCTGCAAGAAAACTAGAAACCCTTCTTTTTGCTTTAACGTGTTGAAATCTGCTGGCACCACAGACTTGAAAGGACTGGCCACCTTCACCCTCAACCTCGCCCACGACAAGGTTGCTGAAACTCGTGCCCTCGCCCAGTCCTTGACGTCCAAGGCAGCCGATCCCAAGCTTAAAGAGCGCTATGCCACCTGCGCTGAACTCTACGACAATGCCGCCGGCGACATCGAGGATGGGAAGGTCAACTTGGGGGAAGGTGACTACAATGGCGTCAACATTAAGGCATTTGCAGCCATGACGGAGGCTGGCGACTGTCTGGACAGCTTTGCGCAGCCGCCGAAGGACCCATCGGCGCTGTCGGGCAATGGCAAGACTGTTGAAGATATTTGTAGTATCATCTTGGTTATAGCCAACCTTCTTCTTGGGCGTGTCTAA MHAASQNDVASTICKKTRNPSFCFNVLKSAGTTDLKGLATFTLNLAHDKVAETRALAQSLTSKAADPKLKERYATCAELYDNAAGDIEDGKVNLGEGDYNGVNIKAFAAMTEAGDCLDSFAQPPKDPSALSGNGKTVEDICSIILVIANLLLGRV
BLAST of CmaCh11G011710 vs. Swiss-Prot
Match: PMEI_ACTDE (Pectinesterase inhibitor OS=Actinidia deliciosa GN=PMEI PE=1 SV=2) HSP 1 Score: 125.9 bits (315), Expect = 3.7e-28 Identity = 69/152 (45.39%), Postives = 92/152 (60.53%), Query Frame = 1
BLAST of CmaCh11G011710 vs. Swiss-Prot
Match: PMEI1_ARATH (Pectinesterase inhibitor 1 OS=Arabidopsis thaliana GN=PMEI1 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18 Identity = 52/142 (36.62%), Postives = 81/142 (57.04%), Query Frame = 1
BLAST of CmaCh11G011710 vs. Swiss-Prot
Match: PMEI2_ARATH (Pectinesterase inhibitor 2 OS=Arabidopsis thaliana GN=PMEI2 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.1e-17 Identity = 53/142 (37.32%), Postives = 75/142 (52.82%), Query Frame = 1
BLAST of CmaCh11G011710 vs. TrEMBL
Match: A0A0A0KCV8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307340 PE=4 SV=1) HSP 1 Score: 181.4 bits (459), Expect = 8.3e-43 Identity = 91/149 (61.07%), Postives = 107/149 (71.81%), Query Frame = 1
BLAST of CmaCh11G011710 vs. TrEMBL
Match: A0A0A0KEW6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307350 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 6.8e-37 Identity = 84/145 (57.93%), Postives = 104/145 (71.72%), Query Frame = 1
BLAST of CmaCh11G011710 vs. TrEMBL
Match: A0A0A0KCC4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307360 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.7e-24 Identity = 67/143 (46.85%), Postives = 90/143 (62.94%), Query Frame = 1
BLAST of CmaCh11G011710 vs. TrEMBL
Match: A0A0A0KHY0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G307370 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 4.9e-19 Identity = 59/155 (38.06%), Postives = 87/155 (56.13%), Query Frame = 1
BLAST of CmaCh11G011710 vs. TrEMBL
Match: K4CUX1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 4.2e-18 Identity = 54/156 (34.62%), Postives = 89/156 (57.05%), Query Frame = 1
BLAST of CmaCh11G011710 vs. TAIR10
Match: AT1G48020.1 (AT1G48020.1 pectin methylesterase inhibitor 1) HSP 1 Score: 94.4 bits (233), Expect = 6.8e-20 Identity = 52/142 (36.62%), Postives = 81/142 (57.04%), Query Frame = 1
BLAST of CmaCh11G011710 vs. TAIR10
Match: AT3G17220.1 (AT3G17220.1 pectin methylesterase inhibitor 2) HSP 1 Score: 89.0 bits (219), Expect = 2.8e-18 Identity = 53/142 (37.32%), Postives = 75/142 (52.82%), Query Frame = 1
BLAST of CmaCh11G011710 vs. TAIR10
Match: AT1G48010.1 (AT1G48010.1 Plant invertase/pectin methylesterase inhibitor superfamily protein) HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06 Identity = 36/126 (28.57%), Postives = 59/126 (46.83%), Query Frame = 1
BLAST of CmaCh11G011710 vs. NCBI nr
Match: gi|659087170|ref|XP_008444309.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 184.5 bits (467), Expect = 1.4e-43 Identity = 93/150 (62.00%), Postives = 112/150 (74.67%), Query Frame = 1
BLAST of CmaCh11G011710 vs. NCBI nr
Match: gi|778722211|ref|XP_004148234.2| (PREDICTED: pectinesterase inhibitor-like [Cucumis sativus]) HSP 1 Score: 181.4 bits (459), Expect = 1.2e-42 Identity = 91/149 (61.07%), Postives = 107/149 (71.81%), Query Frame = 1
BLAST of CmaCh11G011710 vs. NCBI nr
Match: gi|659128306|ref|XP_008464144.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 181.0 bits (458), Expect = 1.6e-42 Identity = 92/151 (60.93%), Postives = 109/151 (72.19%), Query Frame = 1
BLAST of CmaCh11G011710 vs. NCBI nr
Match: gi|659127944|ref|XP_008463970.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 179.1 bits (453), Expect = 5.9e-42 Identity = 91/150 (60.67%), Postives = 109/150 (72.67%), Query Frame = 1
BLAST of CmaCh11G011710 vs. NCBI nr
Match: gi|659113907|ref|XP_008456812.1| (PREDICTED: pectinesterase inhibitor-like [Cucumis melo]) HSP 1 Score: 177.6 bits (449), Expect = 1.7e-41 Identity = 90/150 (60.00%), Postives = 109/150 (72.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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