CmaCh11G011600 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh11G011600
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
Descriptioncopper ion binding;electron carriers
LocationCma_Chr11 : 6711492 .. 6712642 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAGAGGAAGAAATGGAGGAAATGAGAGTGAGGGTGATAATGGTAATAGTGGCAATGGCTTGGGCAACAGATGCAATGGGAGAGAAGCTTCATAAGGTGGGCAATTCTAAAGGATGGAACCCTAATCTCAATTATACCCTTTGGTCCTCCTCTCACCGTTTCTATCTCGGTGATTGGCTTTGTAAGTTTCTAATCTCTTTCGTTTTTTCGTTTCTTTCTTTTTTTGAAAATCTGGTCGGGTCGAGTCGAGTCGAGTCTGAGTGCAGCAAATTTGTAAACTTTTTCCAACAATTTCCGTTGGTTTTGGTCATTCCGCTTCATTTTATATTATTCTTGTATATCATTATTTTCATGTATGTACTTCTCAAAAAAAATTATTTTTTTCTTATGAATATCTAATGTTTTTATTTTTTTATTTTAAGAAAGTATTGTTAAAAGTCGATATTATTTACAAATAAAAAAAAATCGCCCAAAATTAAAGATTAGAAATTGATGAATCTATTTATTATTATTATTATTATTATTTAGTAAATAAAGTTTTGTTGTGAAATATGGATGACTGTATTAATAAAAAAATATTTTGTTTTTTTATCTTATTTAAAAATGATAATATTCTTGAATTTTTTTAAAATATTTCAAAAATATTTTAAAAATATTTTTGAGTTTCATTAATTTGGTGAGAAATTACGAGTGAAATTTAAAAAATTTAAAGATATTTTTAAAACATTTAAAAGTTTTAAATGTGTTTTTTAAAATTTGTACTGAGGAAATAATTAATTTTTAAAATGGTATATTAATATTTTATTTGAAAAGATTTCGTGTTCGACAAGCGATACTACAACGTGTTGGAAGTGAACGAAACGAGCTACGAGGGTTGCACTGAGAAGGAGTTCATAAAGAACATTACAAGAGGTGGACGAGACGTGTTTCAGCTGACGGAGCTGCGGCCCTATTTCTTCATTGCCGGCGGCGGCTACTGCTTTCAAGGAATGAAACTTGCTGTCTTAGTGTGCCCGACGGCCGTAGCCCCGGCTGCTCCGCCGTCTGCCACTCCCATAAGTCGCGCGTCTTTGTCAAACCCCACCTGTTGGATTATGAATGCCCTTCTGCTTTTTGTTGCTCTTTTCTTAGTGATCAAGATTGAGTGA

mRNA sequence

AAAAAAGAGGAAGAAATGGAGGAAATGAGAGTGAGGGTGATAATGGTAATAGTGGCAATGGCTTGGGCAACAGATGCAATGGGAGAGAAGCTTCATAAGGTGGGCAATTCTAAAGGATGGAACCCTAATCTCAATTATACCCTTTGGTCCTCCTCTCACCGTTTCTATCTCGGTGATTGGCTTTATTTCGTGTTCGACAAGCGATACTACAACGTGTTGGAAGTGAACGAAACGAGCTACGAGGGTTGCACTGAGAAGGAGTTCATAAAGAACATTACAAGAGGTGGACGAGACGTGTTTCAGCTGACGGAGCTGCGGCCCTATTTCTTCATTGCCGGCGGCGGCTACTGCTTTCAAGGAATGAAACTTGCTGTCTTAGTGTGCCCGACGGCCGTAGCCCCGGCTGCTCCGCCGTCTGCCACTCCCATAAGTCGCGCGTCTTTGTCAAACCCCACCTGTTGGATTATGAATGCCCTTCTGCTTTTTGTTGCTCTTTTCTTAGTGATCAAGATTGAGTGA

Coding sequence (CDS)

ATGGAGGAAATGAGAGTGAGGGTGATAATGGTAATAGTGGCAATGGCTTGGGCAACAGATGCAATGGGAGAGAAGCTTCATAAGGTGGGCAATTCTAAAGGATGGAACCCTAATCTCAATTATACCCTTTGGTCCTCCTCTCACCGTTTCTATCTCGGTGATTGGCTTTATTTCGTGTTCGACAAGCGATACTACAACGTGTTGGAAGTGAACGAAACGAGCTACGAGGGTTGCACTGAGAAGGAGTTCATAAAGAACATTACAAGAGGTGGACGAGACGTGTTTCAGCTGACGGAGCTGCGGCCCTATTTCTTCATTGCCGGCGGCGGCTACTGCTTTCAAGGAATGAAACTTGCTGTCTTAGTGTGCCCGACGGCCGTAGCCCCGGCTGCTCCGCCGTCTGCCACTCCCATAAGTCGCGCGTCTTTGTCAAACCCCACCTGTTGGATTATGAATGCCCTTCTGCTTTTTGTTGCTCTTTTCTTAGTGATCAAGATTGAGTGA

Protein sequence

MEEMRVRVIMVIVAMAWATDAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLVCPTAVAPAAPPSATPISRASLSNPTCWIMNALLLFVALFLVIKIE
Homology
[Close]
BLAST of CmaCh11G011600 vs. Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.3e-26
Identity = 63/141 (44.68%), Postives = 86/141 (60.99%), Query Frame = 1 

Query: 1   MEEMRVRVIMVIVAMAWATDAMG--EKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYF 60
           M    V +  V++A   A    G   K + VG +K WNPN+NYT+W+    FYLGDWLYF
Sbjct: 1   MARFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYF 60

Query: 61  VFDKRYYNVLEVNETSYEGCTEKEFIKNITRG-GRDVFQLTELRPYFFIAGGGYCFQGMK 120
           VFD+  +N+LEVN+T YEGC     I+N TRG GRD+  L + + Y+ + G G C+ GMK
Sbjct: 61  VFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMK 120

Query: 121 LAVLVCPTAVAPAAPPSATPI 139
           L+V V    + P  PP + P+
Sbjct: 121 LSVKV--EKLPP--PPKSAPV 137

[Close]
BLAST of CmaCh11G011600 vs. Swiss-Prot
Match: ENL2_ARATH (Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.6e-11
Identity = 48/119 (40.34%), Postives = 64/119 (53.78%), Query Frame = 1 

Query: 29  VGNSKGW--NPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNVLEVNETSYEGCTEKEFIKN 88
           VG S  W  NP  NY  WS  +RF + D LYF + K   +VLEVN+  Y+ C  K  IK 
Sbjct: 33  VGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKR 92

Query: 89  ITRGGRDVFQLTELRPYFFIAGG-GYCFQGMKLAVLVC-----PTAVAP--AAPPSATP 138
           +  G  ++  L    P++FI+G    C +G KL V+V       TA +P  AAP S+TP
Sbjct: 93  VDDGDSEI-SLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPHAAAPGSSTP 150

[Close]
BLAST of CmaCh11G011600 vs. Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-10
Identity = 42/127 (33.07%), Postives = 63/127 (49.61%), Query Frame = 1 

Query: 18  ATDAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNVLEVNETSYEG 77
           A  A+     KVG+  GW  NL+YT+W +   F +GD L FV+   + +V  V++  Y+ 
Sbjct: 15  AVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSH-SVSVVDKAGYDN 74

Query: 78  CTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLVCPTAVAPAAP--PSA 137
           C      +N   G   +   T    +F     G+C  GMKLAV V   A +P+ P  P +
Sbjct: 75  CDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAPSPSTPSSPPS 134

Query: 138 TPISRAS 143
           TP + +S
Sbjct: 135 TPSTPSS 140

[Close]
BLAST of CmaCh11G011600 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-09
Identity = 33/102 (32.35%), Postives = 59/102 (57.84%), Query Frame = 1 

Query: 26  LHKVGNSKGWNPNL--NYTLWSSSHRFYLGDWLYFVFDKRYYNVLEVNETSYEGCTEKEF 85
           +HKVG+S GW   +  +Y  W+SS++F++GD L F ++ +++NVL+V++  ++ C     
Sbjct: 3   VHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSP 62

Query: 86  IKNITRGGRDVFQLTELRPYFFIAG-GGYCFQGMKLAVLVCP 125
             + T  G D   L     ++F+ G  G+C  G K+ + V P
Sbjct: 63  AASYT-SGADSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVDP 103

[Close]
BLAST of CmaCh11G011600 vs. Swiss-Prot
Match: NO16_MEDTR (Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 9.6e-06
Identity = 44/150 (29.33%), Postives = 71/150 (47.33%), Query Frame = 1 

Query: 8   VIMVIVAMAWATDAMGEKL-HKVGNS-KGWNPNLN----YTLWSSSHRFYLGDWLYFVFD 67
           ++++I+   W   +  E   + +G+S   W   L     +  W+S+H F +GD + F +D
Sbjct: 7   ILLMIIFSMWLLISHSESTDYLIGDSHNSWKVPLPSRRAFARWASAHEFTVGDTILFEYD 66

Query: 68  KRYYNVLEVNETSYEGC-TEKEFIKNITRGGRDVFQLTELRPYFFIAG-GGYCFQGMKLA 127
               +V EVNE  Y  C T  E +++    G     L ++  Y FI+G   +C  G+KLA
Sbjct: 67  NETESVHEVNEHDYIMCHTNGEHVEH--HDGNTKVVLDKIGVYHFISGTKRHCKMGLKLA 126

Query: 128 V-------LVCPTAVAPAAPPSATPISRAS 143
           V       LV P  +    PPS +P   +S
Sbjct: 127 VVVQNKHDLVLPPLITMPMPPSPSPSPNSS 154

[Close]
BLAST of CmaCh11G011600 vs. TrEMBL
Match: A0A0A0LF66_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824210 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 7.6e-50
Identity = 109/168 (64.88%), Postives = 124/168 (73.81%), Query Frame = 1 

Query: 6   VRVIMVIVAMAW-----ATDAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 65
           +R  MV+V   W      T   GE+LHKVGNS+GW PN NYT WSSSH FYLGDWLYFVF
Sbjct: 50  IRKKMVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVF 109

Query: 66  DKRYYNVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAV 125
           DKRYYNVLEVN+ S+E C EK+FIKNITRGGRDVFQLTEL PYFFI GGGYCFQGMKLAV
Sbjct: 110 DKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAV 169

Query: 126 LVCPT-AVAPAAPPSATPISRASL--SNPT--CWIMNALLLFVALFLV 164
            +      APA  P+ +  S  +   +NPT  C I+NALLLFVA+F +
Sbjct: 170 YMSTVDHSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFL 217

[Close]
BLAST of CmaCh11G011600 vs. TrEMBL
Match: W9R4J9_9ROSA (Lamin-like protein OS=Morus notabilis GN=L484_020957 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-37
Identity = 78/140 (55.71%), Postives = 102/140 (72.86%), Query Frame = 1 

Query: 8   VIMVIVAMAWATDAMGEK--LHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYY 67
           VI V++++     ++  K  LH+VG S GWN N+NYTLWS+S   Y+GDWLYF FDKRYY
Sbjct: 17  VIWVMMSLVGLKTSVMAKTTLHRVGGSLGWNQNINYTLWSASQHIYVGDWLYFHFDKRYY 76

Query: 68  NVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLV--- 127
           NVLEVN+TSYE C ++ FIKNIT+GGRDV++LTE RPY+F++GGGYC+ GM++A+ V   
Sbjct: 77  NVLEVNKTSYENCDDQSFIKNITQGGRDVYELTEARPYYFLSGGGYCYHGMRVAIFVDDR 136

Query: 128 CPTAVAPAAPPSATPISRAS 143
              A  PA  P+  P   AS
Sbjct: 137 LLPATDPAPSPAPVPAQNAS 156

[Close]
BLAST of CmaCh11G011600 vs. TrEMBL
Match: M5X7N7_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020122mg PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.6e-36
Identity = 74/140 (52.86%), Postives = 99/140 (70.71%), Query Frame = 1 

Query: 8   VIMVIVAMAWATDAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNV 67
           V++  + + W   +    LHKVG ++GWN N+NYT WS++  FY+G+WL F FDKRYYNV
Sbjct: 19  VVITAITVGWLMTSANGVLHKVGGAQGWNQNVNYTEWSANENFYVGEWLLFNFDKRYYNV 78

Query: 68  LEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLVC---- 127
           LEVN++S+E C ++ F+KNITRGGRDV+QLTE RPY+F++GGGYCF GM+LA++      
Sbjct: 79  LEVNKSSFESCNDQGFMKNITRGGRDVYQLTEDRPYYFLSGGGYCFHGMRLALVALQDQQ 138

Query: 128 PTAVAPAAPPSATPISRASL 144
               APA  PS    S  SL
Sbjct: 139 QLPPAPALAPSTNAASPNSL 158

[Close]
BLAST of CmaCh11G011600 vs. TrEMBL
Match: A0A061EMK9_THECC (Early nodulin-like protein 20 OS=Theobroma cacao GN=TCM_018673 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.6e-36
Identity = 72/114 (63.16%), Postives = 91/114 (79.82%), Query Frame = 1 

Query: 25  KLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNVLEVNETSYEGCTEKEFI 84
           KLH+VG+ +GWNPN+NY+ W S  +FY+GDWL F FDK Y+NVLEVN+TSYE C ++ FI
Sbjct: 23  KLHRVGDKQGWNPNVNYSEWCSHEQFYVGDWLLFNFDKHYFNVLEVNKTSYETCNDQNFI 82

Query: 85  KNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLV-CPTAVAPAAPPSATP 138
           +NITRGGRDVF+LTE RPY+F++GGGYCF GMK+ V V  P A APA   + +P
Sbjct: 83  QNITRGGRDVFELTEARPYYFLSGGGYCFHGMKVVVNVEIPQAPAPAPAKNDSP 136

[Close]
BLAST of CmaCh11G011600 vs. TrEMBL
Match: I1N688_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_19G026900 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.6e-36
Identity = 85/167 (50.90%), Postives = 116/167 (69.46%), Query Frame = 1 

Query: 5   RVRVIMVIVAMAW-ATDAMGEK-LHKVGNSKGW-NPNLNYTLWSSSHRFYLGDWLYFVFD 64
           R+ V+   VAM W +  AMG   LHKVG SKGW N ++NYT WS+    Y+GDWL F FD
Sbjct: 8   RMMVVASAVAMGWLSVVAMGSPVLHKVGGSKGWINQDVNYTEWSAQEHIYVGDWLIFKFD 67

Query: 65  KRYYNVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVL 124
           KRY+NVLEVN+TSYE C +++FIKNITRGGRDV Q+TE R Y++++GGGYCF GM++AV 
Sbjct: 68  KRYFNVLEVNKTSYENCIDRDFIKNITRGGRDVVQMTEARTYYYLSGGGYCFHGMRVAVQ 127

Query: 125 V----CPTAVAPAAPPSATPISRASLSNPTCWIMNALLLFVALFLVI 165
           V       A+A AAPP+ +P++  S S+P   +   + + +   +V+
Sbjct: 128 VQQEDQDPALAMAAPPAPSPVAYGS-SSPLPSVCTCIWIIIVANVVV 173

[Close]
BLAST of CmaCh11G011600 vs. TAIR10
Match: AT2G27035.1 (AT2G27035.1 early nodulin-like protein 20)

HSP 1 Score: 127.5 bits (319), Expect = 7.8e-30
Identity = 65/143 (45.45%), Postives = 94/143 (65.73%), Query Frame = 1 

Query: 26  LHKVGNSK-GWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNVLEVNETSYEGCTEKEFI 85
           LH+VG  +  WN ++N++ W++  RFY GDWLYF F++  +N+L+VN++SYE C + ++I
Sbjct: 27  LHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHNILQVNKSSYEQCVDNDYI 86

Query: 86  KNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLVCPTAVAPAAPPSATPISRASLS 145
            NITRGGRDVFQL E +PY+FI G GYC +GMKLA+ V P       PP + P +  S +
Sbjct: 87  FNITRGGRDVFQLLEPKPYYFICGRGYCLKGMKLAITVLP------QPPPSAPTNFTSTT 146

Query: 146 NPTC---WIMNALLLFVALFLVI 165
            P      I  A+L+F    L++
Sbjct: 147 TPLIPPNAITAAILIFAFKALLL 163

[Close]
BLAST of CmaCh11G011600 vs. TAIR10
Match: AT5G15350.1 (AT5G15350.1 early nodulin-like protein 17)

HSP 1 Score: 120.9 bits (302), Expect = 7.3e-28
Identity = 63/141 (44.68%), Postives = 86/141 (60.99%), Query Frame = 1 

Query: 1   MEEMRVRVIMVIVAMAWATDAMG--EKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYF 60
           M    V +  V++A   A    G   K + VG +K WNPN+NYT+W+    FYLGDWLYF
Sbjct: 1   MARFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYF 60

Query: 61  VFDKRYYNVLEVNETSYEGCTEKEFIKNITRG-GRDVFQLTELRPYFFIAGGGYCFQGMK 120
           VFD+  +N+LEVN+T YEGC     I+N TRG GRD+  L + + Y+ + G G C+ GMK
Sbjct: 61  VFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMK 120

Query: 121 LAVLVCPTAVAPAAPPSATPI 139
           L+V V    + P  PP + P+
Sbjct: 121 LSVKV--EKLPP--PPKSAPV 137

[Close]
BLAST of CmaCh11G011600 vs. TAIR10
Match: AT3G01070.1 (AT3G01070.1 early nodulin-like protein 16)

HSP 1 Score: 117.9 bits (294), Expect = 6.2e-27
Identity = 64/139 (46.04%), Postives = 84/139 (60.43%), Query Frame = 1 

Query: 1   MEEMRVRVIMVIVAMAWATDAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 60
           M  + V V   ++A   A   +  K   VG++K WNPN+NYT+W+    FYL DWLYFV+
Sbjct: 1   MARVAVLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVY 60

Query: 61  DKRYYNVLEVNETSYEGCTEKEFIKNITRG-GRDVFQLTELRPYFFIAG-GGYCFQGMKL 120
           ++  YNV+EVNET+Y  C     I N +RG GRD+  L   R Y+ I+G GG C+ GMKL
Sbjct: 61  ERNQYNVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKL 120

Query: 121 AVLVCPTAVAPAAPPSATP 138
           AVLV      P  PP+A P
Sbjct: 121 AVLV----EKPPPPPAAAP 135

[Close]
BLAST of CmaCh11G011600 vs. TAIR10
Match: AT4G12880.1 (AT4G12880.1 early nodulin-like protein 19)

HSP 1 Score: 116.7 bits (291), Expect = 1.4e-26
Identity = 64/138 (46.38%), Postives = 82/138 (59.42%), Query Frame = 1 

Query: 5   RVRVIMVIVAMAWATDA----MGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 64
           R  V++  V +A+   A    +  K + VG+ K WNPN+NYTLW+    FY+GDWLYFVF
Sbjct: 3   RSMVLISAVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVF 62

Query: 65  DKRYYNVLEVNETSYEGCTEKEFIKNITRG-GRDVFQLTELRPYFFIAGGGYCFQGMKLA 124
            +  +N+LEVN+  YE C     I+N TRG GRD+  L E R Y+ + G G C QGMKL 
Sbjct: 63  YRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLD 122

Query: 125 VLVCPTAVAPAAPPSATP 138
           VLV      P  PP  TP
Sbjct: 123 VLV----ETPPPPPPFTP 136

[Close]
BLAST of CmaCh11G011600 vs. TAIR10
Match: AT2G26720.1 (AT2G26720.1 Cupredoxin superfamily protein)

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-14
Identity = 47/130 (36.15%), Postives = 73/130 (56.15%), Query Frame = 1 

Query: 21  AMGEKLHKVGNSKGWNP-NLNYTLWSSSHRFYLGDWLYFVFDKRYYNVLEVNETSYEGCT 80
           A+G  +HKVGN+KGW     +Y  W+SS  F +GD L F ++K Y++V EV    +E C 
Sbjct: 23  AVGGTVHKVGNTKGWTMIGGDYEAWASSRVFQVGDTLVFAYNKDYHDVTEVTHNDFEMCE 82

Query: 81  EKEFIKNITRGGRDVFQLTELRPYFFIAG-GGYCFQGMKLAVLVCPTAVAPAAPPSATPI 140
             + ++   + G D   LT+     FI G  G+C +G KL + V P ++   A P   P+
Sbjct: 83  SSKPLRRY-KTGSDSISLTKPGLQHFICGVPGHCKKGQKLQIHVLPASLGHVAVPVPGPV 142

Query: 141 -SRASLSNPT 148
            S++S S+P+
Sbjct: 143 RSQSSSSSPS 151

[Close]
BLAST of CmaCh11G011600 vs. NCBI nr
Match: gi|659085321|ref|XP_008443357.1| (PREDICTED: lamin-like protein [Cucumis melo])

HSP 1 Score: 206.8 bits (525), Expect = 2.9e-50
Identity = 104/147 (70.75%), Postives = 117/147 (79.59%), Query Frame = 1 

Query: 23  GEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYYNVLEVNETSYEGCTEKE 82
           GE LHKVGNS+GW+PN NYT WS+SH FYLGDWLYFVFDKRYYNVLEVN+ SYE C +K+
Sbjct: 36  GEVLHKVGNSEGWSPNQNYTHWSTSHHFYLGDWLYFVFDKRYYNVLEVNKRSYEDCNDKD 95

Query: 83  FIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLVCPTAVAPAAPPSATPISRAS 142
           FIKNITRGGRDVFQL+EL PYFFI GGGYCFQGMKLAV V     APA  P+A+  S   
Sbjct: 96  FIKNITRGGRDVFQLSELHPYFFIGGGGYCFQGMKLAVYVSAVDSAPAPSPAASNKSGGG 155

Query: 143 LS----NPT--CWIMNALLLFVALFLV 164
            S    NPT  C ++NALLLFVA+FL+
Sbjct: 156 ASFLSNNPTFCCSVLNALLLFVAIFLL 182

[Close]
BLAST of CmaCh11G011600 vs. NCBI nr
Match: gi|449437805|ref|XP_004136681.1| (PREDICTED: lamin-like protein [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 109/168 (64.88%), Postives = 124/168 (73.81%), Query Frame = 1 

Query: 6   VRVIMVIVAMAW-----ATDAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 65
           +R  MV+V   W      T   GE+LHKVGNS+GW PN NYT WSSSH FYLGDWLYFVF
Sbjct: 15  IRKKMVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVF 74

Query: 66  DKRYYNVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAV 125
           DKRYYNVLEVN+ S+E C EK+FIKNITRGGRDVFQLTEL PYFFI GGGYCFQGMKLAV
Sbjct: 75  DKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAV 134

Query: 126 LVCPT-AVAPAAPPSATPISRASL--SNPT--CWIMNALLLFVALFLV 164
            +      APA  P+ +  S  +   +NPT  C I+NALLLFVA+F +
Sbjct: 135 YMSTVDHSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFL 182

[Close]
BLAST of CmaCh11G011600 vs. NCBI nr
Match: gi|700204391|gb|KGN59524.1| (hypothetical protein Csa_3G824210 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49
Identity = 109/168 (64.88%), Postives = 124/168 (73.81%), Query Frame = 1 

Query: 6   VRVIMVIVAMAW-----ATDAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 65
           +R  MV+V   W      T   GE+LHKVGNS+GW PN NYT WSSSH FYLGDWLYFVF
Sbjct: 50  IRKKMVMVCTGWLLLIMVTIGKGEELHKVGNSQGWTPNQNYTHWSSSHHFYLGDWLYFVF 109

Query: 66  DKRYYNVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAV 125
           DKRYYNVLEVN+ S+E C EK+FIKNITRGGRDVFQLTEL PYFFI GGGYCFQGMKLAV
Sbjct: 110 DKRYYNVLEVNKRSFEDCNEKDFIKNITRGGRDVFQLTELHPYFFIGGGGYCFQGMKLAV 169

Query: 126 LVCPT-AVAPAAPPSATPISRASL--SNPT--CWIMNALLLFVALFLV 164
            +      APA  P+ +  S  +   +NPT  C I+NALLLFVA+F +
Sbjct: 170 YMSTVDHSAPAPSPAGSNKSGGAFLSNNPTLCCSILNALLLFVAIFFL 217

[Close]
BLAST of CmaCh11G011600 vs. NCBI nr
Match: gi|764615028|ref|XP_004306117.2| (PREDICTED: lamin-like protein [Fragaria vesca subsp. vesca])

HSP 1 Score: 167.2 bits (422), Expect = 2.5e-38
Identity = 82/163 (50.31%), Postives = 121/163 (74.23%), Query Frame = 1 

Query: 4   MRVRVI---MVIVAMAWATDAMGEKLHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVF 63
           M+VR++   +++V + + T +   KL+KVG+ +GWNPN+NYT WS+   FY+G+WL F F
Sbjct: 2   MKVRMVTATVMVVVVGFLTTSAAAKLYKVGDEQGWNPNVNYTQWSADKEFYVGEWLIFNF 61

Query: 64  DKRYYNVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAV 123
           DKRYYNVLEVN+TSY+ C ++ FI NITRGGRDVF+L E RPY+F++ GGYC+ GMKLA+
Sbjct: 62  DKRYYNVLEVNKTSYDSCNDQAFITNITRGGRDVFELKEARPYYFLSSGGYCYHGMKLAL 121

Query: 124 LVCP-TAVAPAAPPSATPISRASLSN-PTCWIMNALLLFVALF 162
           +V     +APA  P+A+  S  SL++ P   I++ +++ +AL+
Sbjct: 122 VVQEHPPLAPALAPAASNASPNSLTSCPQMSIVSLIVISIALY 164

[Close]
BLAST of CmaCh11G011600 vs. NCBI nr
Match: gi|703073522|ref|XP_010089567.1| (Lamin-like protein [Morus notabilis])

HSP 1 Score: 163.7 bits (413), Expect = 2.8e-37
Identity = 78/140 (55.71%), Postives = 102/140 (72.86%), Query Frame = 1 

Query: 8   VIMVIVAMAWATDAMGEK--LHKVGNSKGWNPNLNYTLWSSSHRFYLGDWLYFVFDKRYY 67
           VI V++++     ++  K  LH+VG S GWN N+NYTLWS+S   Y+GDWLYF FDKRYY
Sbjct: 17  VIWVMMSLVGLKTSVMAKTTLHRVGGSLGWNQNINYTLWSASQHIYVGDWLYFHFDKRYY 76

Query: 68  NVLEVNETSYEGCTEKEFIKNITRGGRDVFQLTELRPYFFIAGGGYCFQGMKLAVLV--- 127
           NVLEVN+TSYE C ++ FIKNIT+GGRDV++LTE RPY+F++GGGYC+ GM++A+ V   
Sbjct: 77  NVLEVNKTSYENCDDQSFIKNITQGGRDVYELTEARPYYFLSGGGYCYHGMRVAIFVDDR 136

Query: 128 CPTAVAPAAPPSATPISRAS 143
              A  PA  P+  P   AS
Sbjct: 137 LLPATDPAPSPAPVPAQNAS 156

The following BLAST results are available for this feature:
BLAST of CmaCh11G011600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LAML_ARATH1.3e-2644.68Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1[more]
ENL2_ARATH2.6e-1140.34Early nodulin-like protein 2 OS=Arabidopsis thaliana GN=At4g27520 PE=1 SV=1[more]
BCB3_ARATH2.2e-1033.07Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1[more]
MAVI_CUCPE1.1e-0932.35Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
NO16_MEDTR9.6e-0629.33Early nodulin-16 OS=Medicago truncatula GN=ENOD16 PE=3 SV=1[more]
BLAST of CmaCh11G011600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LF66_CUCSA7.6e-5064.88Uncharacterized protein OS=Cucumis sativus GN=Csa_3G824210 PE=4 SV=1[more]
W9R4J9_9ROSA1.9e-3755.71Lamin-like protein OS=Morus notabilis GN=L484_020957 PE=4 SV=1[more]
M5X7N7_PRUPE3.6e-3652.86Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020122mg PE=4 S... [more]
A0A061EMK9_THECC3.6e-3663.16Early nodulin-like protein 20 OS=Theobroma cacao GN=TCM_018673 PE=4 SV=1[more]
I1N688_SOYBN3.6e-3650.90Uncharacterized protein OS=Glycine max GN=GLYMA_19G026900 PE=4 SV=1[more]
BLAST of CmaCh11G011600 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27035.17.8e-3045.45 early nodulin-like protein 20[more]
AT5G15350.17.3e-2844.68 early nodulin-like protein 17[more]
AT3G01070.16.2e-2746.04 early nodulin-like protein 16[more]
AT4G12880.11.4e-2646.38 early nodulin-like protein 19[more]
AT2G26720.11.6e-1436.15 Cupredoxin superfamily protein[more]
BLAST of CmaCh11G011600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085321|ref|XP_008443357.1|2.9e-5070.75PREDICTED: lamin-like protein [Cucumis melo][more]
gi|449437805|ref|XP_004136681.1|1.1e-4964.88PREDICTED: lamin-like protein [Cucumis sativus][more]
gi|700204391|gb|KGN59524.1|1.1e-4964.88hypothetical protein Csa_3G824210 [Cucumis sativus][more]
gi|764615028|ref|XP_004306117.2|2.5e-3850.31PREDICTED: lamin-like protein [Fragaria vesca subsp. vesca][more]
gi|703073522|ref|XP_010089567.1|2.8e-3755.71Lamin-like protein [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003245Phytocyanin_dom
IPR008972Cupredoxin
Vocabulary: Molecular Function
TermDefinition
GO:0009055electron carrier activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0009055 electron carrier activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G011600.1CmaCh11G011600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003245Phytocyanin domainPRODOMPD003122coord: 58..122
score: 9.0
IPR003245Phytocyanin domainPFAMPF02298Cu_bind_likecoord: 35..116
score: 4.6
IPR003245Phytocyanin domainPROFILEPS51485PHYTOCYANINcoord: 25..124
score: 28
IPR008972CupredoxinGENE3DG3DSA:2.60.40.420coord: 26..123
score: 2.1
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 25..123
score: 3.48
NoneNo IPR availablePANTHERPTHR33021FAMILY NOT NAMEDcoord: 1..142
score: 1.9
NoneNo IPR availablePANTHERPTHR33021:SF17SUBFAMILY NOT NAMEDcoord: 1..142
score: 1.9

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh11G011600Silver-seed gourdcarcmaB1143
CmaCh11G011600Cucurbita moschata (Rifu)cmacmoB112
CmaCh11G011600Watermelon (Charleston Gray)cmawcgB117
CmaCh11G011600Watermelon (97103) v1cmawmB104
CmaCh11G011600Cucurbita pepo (Zucchini)cmacpeB147