CmaCh11G009970 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G009970
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Trafficking protein particle complex subunit 5
Location	Cma_Chr11 : 5371774 .. 5377515 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCGGAGTTGGGAAGGTCAAGCAGTATTCTAATGTCCTCGACAGACCTCTCAGCAAGGGAAAACAGGAGGTTGTTCCCCTTATCTCTACAGATACGTTTGCTTCTTTTTTTCTTGTGAAAAATTTCAGCTCTGTTTTACCTCCGTGTGGACCAATTTGTTTAAATAGAACTCTTTAGTTCCTTGCTGGATTTTGCAGTTGCAATCTTGATATGTATGTTTAACTAAGTGAAAACGCAAGAGCTTGGCATATTATTTCTTTGCTGAGCTTGTATGTTTACATTGACTTGAACTTGAGTTTTTTTTCCTTCTAAATTATATGTCTTTTTGTATCTGGAACAGAATCCTTACAGCAGGGCATATTATTTCTAGAGACCCCTTATCAACGATCATTTGATAATTTCAAGTGAATTTGAGCTACAATATGCATGTGACTTCATTTTAATTTGTTCATGTGTAGGTGAGTTTGAGTGCATTTGCATTCTTGTTCTCTGAACTCGTGCAATACAATCAGACTCAGGTTGACAACATTGCTGAGTTGGAACGAAGGTGATTTTTCATTTGGAGCTATTATATCTTAACTAACAACGATTCATCATTATGGTCTTTGTTTCTTTTGGAAAGGGGGTACAAAAATTAACAGGAGATGTACGTCAATAATGGCAAATGTTGTAGATTTGAAAATTCTTATGTTCAATTGATTGCATATTCTTTTTTTATTCTTTTCCTTCTGATATATATATATATATATATATATATAAAAATATATATATCTCCAAAGGCCCGATTTAAGGAGAGGGGTAAAGTTTCAGGTTTGTTTTAGACTTCGTAGTATTTAGGCAGTTAAATGCTGCTGTCCAGAGAAGGATTTGGTCTTCTTGGGGCTATGCCCTTTTTGCGTCCATGAGGCACTTCAATGTGGGTGAAAGGATTGTAAATGTGATATGTTGATGATGTTGAATTCCGGAAATTTTTAGTTTTTTTTTTTATTCTTATTTTCAGATGGATATATCACTTATAATAATAATGGAAACTATTCTGTCTAGGAATAATAGCAGCAATGTCGTATGTCCTTGTTACTTTTTTCCCTTGCACATTAGAATTGTTTATCTCACAGTTCGATGGCTTTGAACTAAAATGAATCAGGTTGGAGGATGCAGGCTATGCAGTTGGTGCTCGAGTATTGGAACTGTTTTGTCATCGAGAAAAGGTATAGAATCTTATGTTAAAGCTAATTGAACATTTTGCTTTCTTTAACTGAACCACATTGTTTTGCTTTTTCTGCTGAAGTTTGTTTTATGTTCTCAGAATTTTATTTTAAGTTTAAATTGCAAATTTATTTTTAAAAAGCTTTGAAATTCTTCTGAAAATTAGGGTTTCGAAATATGGTTAAAAATGGTTGTCTAATTTTTAAAATAAAGATTTGTTTGGTGTAGATAACTTAATTGACAGTTATTTTTTAAAAACAATATTCAGAACAAAAACTACCAGACGATAGAGATATATTTATTTTCCGGTCAGAATACACTTTTCGTCTTGTGTCTATTTGGTTCTTAAGGTTTGAAAATAGATACTTTTAGGCCTAGGGTTTCTAAAATAGCTCTAAATGGTCCCCAAGCCCATTTGATCATTGGTGACTAACGGATTATGATGTGGTAATTGATGACTTGTATTATATTGACTTGGCAAAATTAAATAAAATTAATATTATTTTGCTGGTGAAGTGGCCTTTCTCTCTTTCTTTCCCTTTTCTTCTTTGTCTGTCCTATTCTCCCTGAACCTTACCACCACCATCTGCCTCTCTCCAGCCATCGACCACTGTCACTTCACTTTTGTTGTTCCCCTGCCACCTCTTCAGATCTGGAATGAAGAGTTTCCTTCCAGATCAGAAGGCTCATTAGAACGAAGCTTCAGATATGGAAGGAAGCTCTTCATTCCAGATCTAAAGTCTCTCTGGAGATTTATTCTGAAAAGTAGTCTGGAATGAGATAGAAATGAAGTGTTCCAGACATTTATTTTAAATTAATTAGTTTCATGGTTTTTGGAAGGATTACAGTGCTGTGGGTTTAGGAAAGGAGAAAAAGAACAGTGTTGTTAGAAATAAAGTCACTGTTCTGTAACATTTTTCTACTTCAAGTTTTGGAACAGGGTTCGAAGTCTGTATAAACAAGTGTGGTCTTGATTGGATGAAATATTAAGAAACTACAGTATAACAATAGCCTTTCAAGAGGGCTATCTCTTTTCCAAAGTCCCACAATGGACACTCCATTAAAATGATTCCCACCCTCTAAGTTCCCTAACGCACTTCTGTCGATGATTTCTTCATTGTTTACCCTATCTATTCCCGCCACCACTTCCACATGACACCATTTAGAACTATTTTTCAAACCTTACGTACTAAAAGTGTCCCTTTTCAGTCCTCGCGATCAAATAGCACTAACTCCATACCTTAGTGATCAAAAATGTATTTTTTGCCATGCTTTTTTATTTTGGATGTGTTCTGCAGTGTTTTCCAATCAATGGTTCATTAATTATAATAAGTAATTATTTAGGTATAATCTGCAATTCAAAAGTGTATTTTTTGAACTTACAACAAGAGAAAACTATTGAAAAAGAATTAGCGTGTGAAACTAAGTTCTAAAACAACTATAAAAATACTCCCAAACCACTTAGCTAACTTTAACGGCAGTTATCATTAATTCCCTTCTACTTGCAATGAAGATGGTAGACCTGTTTAACCATGAAAGTTTAGTTATTGATTAATTTTTGTTAGAGCATCAGTTATTGGGCTTGTACATGGGAGATAACTCTTGAGCATAAAGCGCAATATTTTTAGATTTGAATTGCAGATTTTCATTTACATAATTTTTTCGTTCTTTCGTATTTGCTCTACCTTTAAGGTAATGTTCAAATCTGCTTTATGCTTCTTTGTTCTCTCAGGGAAATAGACGGGAGACACGATTGTTAGGAATTCTGTCATTTGTACACAGCACAATTTGGAAGATTTTGTTTGGAAAGGTGAATGCTTGTATTTTCTTGCACAAATTGCCCTTAAAGTATGGTAGATACACCCTCTAACTTCAAATTGCGAAAACTAACCTTTTGTTGCAAGAATAATATGTATTACTCTGTTTTCTTATTATTCATTAGACAAGACCATACAACTAATAATCTTGTGAAAAGGGAACTATACAGAAAAAGGGAACAATGCAGAAAATGGAACAATAGAAAATAGGAAATAGGCTAATTCCCTTATTTAATAGGATTGCACCTATACTCCTCAAATTAAGGTTATTCCTTTTTGACTTCTTTGAATGTAGATCTTAGAGGGTAACCCAAAGATATGACAACATGAGTGGTATTCAGGATCTCACTGCATCGATACAGTTCAATGAGCCTCTGAAGAGTCCGACTTTACTTTGCACATCTGAATCTAAAACCACATTTCTACATTAGTTTTTTTTAGTTGATGTAGATTGAAAACTATTATAAAACTGTTTTTAAATTTAACTCCTAAACCGATGTTACATTATCAGTTGGTTTTGGTTGTCTCCTGTGTCCAACTTGCTTTCCCGTTCTTTAGGGTTCTCCTCTCTGTATTTGGATAGGAGGTGTTCGAGGCTATAGCCTTTTGAGGTTGATTAGGGATATTCAAATCAACCATGGTAGAAAGATTCTTCGTTTTGGCTTTTGAATCTTTTCCAGTTGTTGAGCACCCCCCCCCAAAAAAAAAGAAAAAAAAGAAAAAAAGACTCCTGTGTTTTCCTCCCGATGGAAGGTTAAAATTCGAAAGGAGGTTAAATTTTTTTTTCCCTGAAGATTTTGCATGGTCGAAATTTTTGTCTGGTAGGTTTTGCATGGAAAAGTCAACACTCTGAATCTCGTTCAAAGGTGTTTTTCTTTGTGTTTGGGGCATCTGTGGTGCATCTTGTTCACAGAAGCTTCATAGCATCTTGATCATTTGTTTTGGTCTTGCTAGTTTGTGCAGTTGACTTGAGGTTGTTTTTTGGACTTCTTTGGGTTCTCTTGTGCGTAACAGAAATTGTAGATCCATGATGGGGGACATTGTCCCCCCTTAGGAAGAGTTCTTTGGCAGACTTGTGTTTTTTTCCTTTTTTTTTTTTGTCGTGTTATGGTGTGTGTACTTAGCATGAGAGAAATAATAGTTTTTTTAGGGAACAGGCATTTGTTGTGGGTGGGCTCCTCTTGTATGGAATATTCTTTCACATTTCTCAAATAAAAGCTTGGTTTCTTTTTCTCAAAAAATAAAAATAAAAATAAAATCAGATGCTACATGTGTTTAGATTCCAAAATTGGGTCATGATTTTAAAAATTGTTTTTGAAAGTATTTAACTGTTAGGCAGAATAAGTAGAAAAGATCTACTAATTTCTGCTTGCATGTTGTCAGGTTGCTGACTCACTTGAGAAAGGCACTGAGCATGAAGATGAGTACATGATCAGTGAGAAAGAGCTGCTCGTGAATAGGTAACTATTGTCCCAGTCTTCGTACTTATGCTTTTTTTTTGGCATTCACTCAATAACCCAGACATTTACCGTAGATTTATTTCAATTCCAAAAGACATGGGAGCGTTTAACTGCGGGGCTTTTGTAGCTGGCATAGTAAAAGTAAGTTCTGCAAGCTCTCCATGATATGGGTGGTAATCTAGTTTATGAAAGTTCTGAATTTGTTCCTATTTGCTATAAGGGTGTTCTGGACAATGCTGGGTTTCCTGCTGTTGTAACGGCGCATTTCGTTCCAGTGGAGGGCCAACAAAGACCACGGACGACTATTTTGATTAAATTTGCAGAAGAGGTGAGTATCCTCCCCCCTCTTCCACCAAAAAACCGAACTTTACTCTTTTTTTCTGATTAATGCTTATTGGAGTTCCTTTTTTAAACACTCGTTTGCAAATTTGTCCATGTCAGATAGCTCAATAGATATATGTTAGATATTAGTTGTACAAGGCTAATATGGGATATCGAATACTTGTTAGGCACTTACTAAACCCTTGTTAAAACATAATAAATAGATGCATAATAATTTTTTTATAACATAGTACATGAAACTCGTTTTTTAGCCTATAAATGTGTAAACTCATTGATTGAATTTACTTATAAAAAATGTATATTTTAATGAACGTGTCTTTGTTGTGTTCATATCAAAGATTTCAAAATTGTGATGTGTCTCTGTGTTTGTGTGTGTTATCATATCTATGTCTTATGCCTGTATCCATGCATCTTAGGAGTTATATATGCATCTGTGCTGTATTATTTTGAAGGTTTAATGTCAAGTTCCCTTTCCATTTTCTCTCAAATAATTGTGTGCTCGCTTGTCTTTTCCCTTCTCTTTTTTCTTCTCGACCCCCTTTTCAGGTATTAGCAAGAGAAGCTAGATTAGGATAATATCATCTGAAGTAAGCTTTGACAGCTTTGTGATAATGGAGAATGGAGAATGGGGAATGGTGAATTTCTTTTTAGCCCTTCGAACAAATAAAGATTTCCACCTGCTATATCCCTGTAGTGAAGCTGTAAGGAACTTTCGCTCGTCAATTATTTTCTTTACTTGATGGCAAAATGATGGCACAATTGTGAAACTATAAGATTTAGTAGTATTATTGTAAAGGTGTTTATATGAACTTCAAATGGTTTATTCAGCCTCTTGGTGATATTTGTGAACTCTGAATGTTTGAACAGAACCACATTTTAATCTACCAATTCAAGCTTTTGTTGCTAATTTTGTC

mRNA sequence

ATGATCGGAGTTGGGAAGGTCAAGCAGTATTCTAATGTCCTCGACAGACCTCTCAGCAAGGGAAAACAGGAGGTGAGTTTGAGTGCATTTGCATTCTTGTTCTCTGAACTCGTGCAATACAATCAGACTCAGGTTGACAACATTGCTGAGTTGGAACGAAGGTTGGAGGATGCAGGCTATGCAGTTGGTGCTCGAGTATTGGAACTGTTTTGTCATCGAGAAAAGGGAAATAGACGGGAGACACGATTGTTAGGAATTCTGTCATTTGTACACAGCACAATTTGGAAGATTTTGTTTGGAAAGGTTGCTGACTCACTTGAGAAAGGCACTGAGCATGAAGATGAGTACATGATCAGTGAGAAAGAGCTGCTCGTGAATAGATTTATTTCAATTCCAAAAGACATGGGAGCGTTTAACTGCGGGGCTTTTGTAGCTGGCATAGTAAAAGGTGTTCTGGACAATGCTGGGTTTCCTGCTGTTGTAACGGCGCATTTCGTTCCAGTGGAGGGCCAACAAAGACCACGGACGACTATTTTGATTAAATTTGCAGAAGAGGTATTAGCAAGAGAAGCTAGATTAGGATAATATCATCTGAAGTAAGCTTTGACAGCTTTGTGATAATGGAGAATGGAGAATGGGGAATGGTGAATTTCTTTTTAGCCCTTCGAACAAATAAAGATTTCCACCTGCTATATCCCTGTAGTGAAGCTGTAAGGAACTTTCGCTCGTCAATTATTTTCTTTACTTGATGGCAAAATGATGGCACAATTGTGAAACTATAAGATTTAGTAGTATTATTGTAAAGGTGTTTATATGAACTTCAAATGGTTTATTCAGCCTCTTGGTGATATTTGTGAACTCTGAATGTTTGAACAGAACCACATTTTAATCTACCAATTCAAGCTTTTGTTGCTAATTTTGTC

Coding sequence (CDS)

ATGATCGGAGTTGGGAAGGTCAAGCAGTATTCTAATGTCCTCGACAGACCTCTCAGCAAGGGAAAACAGGAGGTGAGTTTGAGTGCATTTGCATTCTTGTTCTCTGAACTCGTGCAATACAATCAGACTCAGGTTGACAACATTGCTGAGTTGGAACGAAGGTTGGAGGATGCAGGCTATGCAGTTGGTGCTCGAGTATTGGAACTGTTTTGTCATCGAGAAAAGGGAAATAGACGGGAGACACGATTGTTAGGAATTCTGTCATTTGTACACAGCACAATTTGGAAGATTTTGTTTGGAAAGGTTGCTGACTCACTTGAGAAAGGCACTGAGCATGAAGATGAGTACATGATCAGTGAGAAAGAGCTGCTCGTGAATAGATTTATTTCAATTCCAAAAGACATGGGAGCGTTTAACTGCGGGGCTTTTGTAGCTGGCATAGTAAAAGGTGTTCTGGACAATGCTGGGTTTCCTGCTGTTGTAACGGCGCATTTCGTTCCAGTGGAGGGCCAACAAAGACCACGGACGACTATTTTGATTAAATTTGCAGAAGAGGTATTAGCAAGAGAAGCTAGATTAGGATAA

Protein sequence

MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLAREARLG

Homology

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BLAST of CmaCh11G009970 vs. Swiss-Prot
Match: TPPC5_DICDI (Trafficking protein particle complex subunit 5 OS=Dictyostelium discoideum GN=trappc5 PE=3 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 7.9e-60
Identity = 109/180 (60.56%), Postives = 146/180 (81.11%), Query Frame = 1


Query: 12  NVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELFC 71
           N++DRPLSKGK E+++S+FAFLFSE++QY Q ++    ELE++L D GY++G R+LEL C
Sbjct: 7   NIVDRPLSKGKGEINISSFAFLFSEMIQYCQDRIKAGHELEKKLSDMGYSIGPRLLELLC 66

Query: 72  HREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISEKELLVNRFISI 131
            REK ++RET+LLGILSF+H+T+WK LFGK ADSLEK TE +DEYMIS+  ++VN+FIS+
Sbjct: 67  VREKNSKRETKLLGILSFIHTTVWKSLFGKPADSLEKSTEADDEYMISDNNMVVNKFISL 126

Query: 132 PKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLAREA 191
           PK + + NC AFVAGI++G+L +A FPA VTAH V VEG++ P+T ILIKF  EV+ R A
Sbjct: 127 PKHLSSLNCAAFVAGIIEGILCSAEFPARVTAHNVAVEGKRFPKTVILIKFNPEVIERNA 186

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BLAST of CmaCh11G009970 vs. Swiss-Prot
Match: TRS31_SCHPO (Transport protein particle subunit trs31 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trs31 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.2e-45
Identity = 94/184 (51.09%), Postives = 130/184 (70.65%), Query Frame = 1


Query: 12  NVLDRPLSKGKQ-EVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELF 71
           +V ++ L+K +  +V+LS+FAF+FSEL+Q  Q+QV  I E E +L + GY VG +++EL 
Sbjct: 27  SVYEQNLNKIRNSDVNLSSFAFIFSELIQRIQSQVSGIQEFEEKLNEHGYRVGQKLVELV 86

Query: 72  CHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 131
             RE+  +RETR+LGIL ++HS++WK LFGK ADSLEK  E  DEYMI +   L+N+FIS
Sbjct: 87  VWRERNPKRETRILGILQYIHSSVWKYLFGKHADSLEKSKEASDEYMIVDNNPLLNKFIS 146

Query: 132 IPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLARE 191
           +PK+M   NC A++AGI++G LD+A FP   +AH VP+  Q   RT ILIK    V+ARE
Sbjct: 147 VPKEMNQLNCCAYLAGIIEGFLDSAQFPCKASAHSVPL-SQYPYRTVILIKLDPSVIARE 206

Query: 192 ARLG 195
             LG
Sbjct: 207 EVLG 209

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BLAST of CmaCh11G009970 vs. Swiss-Prot
Match: TPPC5_HUMAN (Trafficking protein particle complex subunit 5 OS=Homo sapiens GN=TRAPPC5 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.3e-42
Identity = 92/183 (50.27%), Postives = 124/183 (67.76%), Query Frame = 1


Query: 11  SNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELF 70
           S +L+R L++ + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL   G  VGARVL+  
Sbjct: 10  SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFSVAELQSRLAALGRQVGARVLDAL 69

Query: 71  CHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
             REKG RRET++LG L FV   +WK LFGK AD LE+  +    + I E+E L+N +IS
Sbjct: 70  VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129

Query: 131 IPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLARE 190
           +PK+    NC +F AGIV+ VL ++GFPA VTAH+          TT++IKF E V+AR+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARD 185

Query: 191 ARL 194
             L
Sbjct: 190 RAL 185

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BLAST of CmaCh11G009970 vs. Swiss-Prot
Match: TPPC5_BOVIN (Trafficking protein particle complex subunit 5 OS=Bos taurus GN=TRAPPC5 PE=2 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.7e-42
Identity = 92/183 (50.27%), Postives = 123/183 (67.21%), Query Frame = 1


Query: 11  SNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELF 70
           S +L+R L++ + EVSLSAFA LFSELVQ+ Q++V  +AEL+ RL   G  VGARVL+  
Sbjct: 10  SALLERALARPRTEVSLSAFALLFSELVQHCQSRVFTVAELQARLAALGRQVGARVLDAL 69

Query: 71  CHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
             REKG RRET++LG L FV   +WK LFGK AD LE+  +    + I E+E L+N +IS
Sbjct: 70  VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129

Query: 131 IPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLARE 190
           +PK+    NC +F AGIV+ VL ++GFPA VTAH+          TT++IKF E V+AR+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARD 185

Query: 191 ARL 194
             L
Sbjct: 190 RAL 185

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BLAST of CmaCh11G009970 vs. Swiss-Prot
Match: TPPC5_MOUSE (Trafficking protein particle complex subunit 5 OS=Mus musculus GN=Trappc5 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.7e-42
Identity = 92/183 (50.27%), Postives = 123/183 (67.21%), Query Frame = 1


Query: 11  SNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELF 70
           S +L+R L + + EVSLSAFA LFSELVQ+ Q++V ++AEL+ RL   G  VGARVL+  
Sbjct: 10  SALLERALVRPRTEVSLSAFALLFSELVQHCQSRVFSVAELQARLAALGRQVGARVLDAL 69

Query: 71  CHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISEKELLVNRFIS 130
             REKG RRET++LG L FV   +WK LFGK AD LE+  +    + I E+E L+N +IS
Sbjct: 70  VAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIEREPLINTYIS 129

Query: 131 IPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILIKFAEEVLARE 190
           +PK+    NC +F AGIV+ VL ++GFPA VTAH+          TT++IKF E V+AR+
Sbjct: 130 VPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHW-------HKGTTLMIKFEEAVIARD 185

Query: 191 ARL 194
             L
Sbjct: 190 RAL 185

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BLAST of CmaCh11G009970 vs. TrEMBL
Match: A0A0A0KA36_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087720 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 4.4e-102
Identity = 189/194 (97.42%), Postives = 194/194 (100.00%), Query Frame = 1


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVL++PLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIV+GVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

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BLAST of CmaCh11G009970 vs. TrEMBL
Match: A0A068UPR6_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00030861001 PE=4 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 1.9e-100
Identity = 186/194 (95.88%), Postives = 191/194 (98.45%), Query Frame = 1


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQY+NVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKMKQYTNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHREKGNRRETRLLGILSFVHST+WK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIV+GVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLRREARLG 194

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BLAST of CmaCh11G009970 vs. TrEMBL
Match: A0A067KUL6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04011 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 9.3e-100
Identity = 184/194 (94.85%), Postives = 191/194 (98.45%), Query Frame = 1


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVLD+PLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHREKGNRRETRLLGILSFVHST+WK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIV+GVLD+AGFPAVVTAHFVP+EGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLRREARLG 194

[Close]

BLAST of CmaCh11G009970 vs. TrEMBL
Match: A0A067EWE0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026545mg PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 9.3e-100
Identity = 184/194 (94.85%), Postives = 191/194 (98.45%), Query Frame = 1


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVLD+PLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHR+KGNRRETRLLGILSFVHST+WK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIV+GVLD+AGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLRREARLG 194

[Close]

BLAST of CmaCh11G009970 vs. TrEMBL
Match: V4URC6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009392mg PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 9.3e-100
Identity = 184/194 (94.85%), Postives = 191/194 (98.45%), Query Frame = 1


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVLD+PLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 29  MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 88

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHR+KGNRRETRLLGILSFVHST+WK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 89  AVGARVLELLCHRDKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 148

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIV+GVLD+AGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 149 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQQRPRTTILI 208

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 209 KFAEEVLRREARLG 222

[Close]

BLAST of CmaCh11G009970 vs. TAIR10
Match: AT5G58030.1 (AT5G58030.1 Transport protein particle (TRAPP) component)

HSP 1 Score: 365.2 bits (936), Expect = 2.6e-101
Identity = 181/193 (93.78%), Postives = 190/193 (98.45%), Query Frame = 1


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVLD+PLSKGKQEVSL+AFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKMKQYSNVLDKPLSKGKQEVSLTAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVG+RVLEL C+REKGNRRETRLLGILSFVHST+WK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGSRVLELLCNREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIVKGVLDNAGFPAVVTAHFVP+EGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPIEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARL 194
           KFA+EVL REARL
Sbjct: 181 KFADEVLKREARL 193

[Close]

BLAST of CmaCh11G009970 vs. NCBI nr
Match: gi|659120080|ref|XP_008460002.1| (PREDICTED: trafficking protein particle complex subunit 5 [Cucumis melo])

HSP 1 Score: 379.8 bits (974), Expect = 2.9e-102
Identity = 190/194 (97.94%), Postives = 194/194 (100.00%), Query Frame = 1


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVL+RPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLERPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIV+GVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

[Close]

BLAST of CmaCh11G009970 vs. NCBI nr
Match: gi|449445664|ref|XP_004140592.1| (PREDICTED: trafficking protein particle complex subunit 5 [Cucumis sativus])

HSP 1 Score: 378.6 bits (971), Expect = 6.4e-102
Identity = 189/194 (97.42%), Postives = 194/194 (100.00%), Query Frame = 1


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVL++PLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLEKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIV+GVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVLAREARLG
Sbjct: 181 KFAEEVLAREARLG 194

[Close]

BLAST of CmaCh11G009970 vs. NCBI nr
Match: gi|661886287|emb|CDP10209.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 373.2 bits (957), Expect = 2.7e-100
Identity = 186/194 (95.88%), Postives = 191/194 (98.45%), Query Frame = 1


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQY+NVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKMKQYTNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHREKGNRRETRLLGILSFVHST+WK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIV+GVLDNAGFPAVVTAHFVPVEGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLRREARLG 194

[Close]

BLAST of CmaCh11G009970 vs. NCBI nr
Match: gi|747074048|ref|XP_011084006.1| (PREDICTED: trafficking protein particle complex subunit 5 [Sesamum indicum])

HSP 1 Score: 372.9 bits (956), Expect = 3.5e-100
Identity = 185/194 (95.36%), Postives = 191/194 (98.45%), Query Frame = 1


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+K Y+NVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKPYTNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHREKGNRRETRLLGILSF+HST+WK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHREKGNRRETRLLGILSFIHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPV+GQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVDGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLQREARLG 194

[Close]

BLAST of CmaCh11G009970 vs. NCBI nr
Match: gi|802592240|ref|XP_012071476.1| (PREDICTED: trafficking protein particle complex subunit 5 [Jatropha curcas])

HSP 1 Score: 370.9 bits (951), Expect = 1.3e-99
Identity = 184/194 (94.85%), Postives = 191/194 (98.45%), Query Frame = 1


Query: 1   MIGVGKVKQYSNVLDRPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60
           MIGVGK+KQYSNVLD+PLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY
Sbjct: 1   MIGVGKIKQYSNVLDKPLSKGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGY 60

Query: 61  AVGARVLELFCHREKGNRRETRLLGILSFVHSTIWKILFGKVADSLEKGTEHEDEYMISE 120
           AVGARVLEL CHREKGNRRETRLLGILSFVHST+WK+LFGKVADSLEKGTEHEDEYMISE
Sbjct: 61  AVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISE 120

Query: 121 KELLVNRFISIPKDMGAFNCGAFVAGIVKGVLDNAGFPAVVTAHFVPVEGQQRPRTTILI 180
           KELLVNRFISIPKDMG FNCGAFVAGIV+GVLD+AGFPAVVTAHFVP+EGQQRPRTTILI
Sbjct: 121 KELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPMEGQQRPRTTILI 180

Query: 181 KFAEEVLAREARLG 195
           KFAEEVL REARLG
Sbjct: 181 KFAEEVLRREARLG 194

The following BLAST results are available for this feature:

BLAST of CmaCh11G009970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TPPC5_DICDI	7.9e-60	60.56	Trafficking protein particle complex subunit 5 OS=Dictyostelium discoideum GN=tr...	[more]
TRS31_SCHPO	7.2e-45	51.09	Transport protein particle subunit trs31 OS=Schizosaccharomyces pombe (strain 97...	[more]
TPPC5_HUMAN	4.3e-42	50.27	Trafficking protein particle complex subunit 5 OS=Homo sapiens GN=TRAPPC5 PE=1 S...	[more]
TPPC5_BOVIN	5.7e-42	50.27	Trafficking protein particle complex subunit 5 OS=Bos taurus GN=TRAPPC5 PE=2 SV=...	[more]
TPPC5_MOUSE	9.7e-42	50.27	Trafficking protein particle complex subunit 5 OS=Mus musculus GN=Trappc5 PE=1 S...	[more]

BLAST of CmaCh11G009970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA36_CUCSA	4.4e-102	97.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G087720 PE=4 SV=1	[more]
A0A068UPR6_COFCA	1.9e-100	95.88	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00030861001 PE=4 SV=1	[more]
A0A067KUL6_JATCU	9.3e-100	94.85	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04011 PE=4 SV=1	[more]
A0A067EWE0_CITSI	9.3e-100	94.85	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g026545mg PE=4 SV=1	[more]
V4URC6_9ROSI	9.3e-100	94.85	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009392mg PE=4 SV=1	[more]

BLAST of CmaCh11G009970 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58030.1	2.6e-101	93.78	Transport protein particle (TRAPP) component	[more]

BLAST of CmaCh11G009970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659120080\|ref\|XP_008460002.1\|	2.9e-102	97.94	PREDICTED: trafficking protein particle complex subunit 5 [Cucumis melo]	[more]
gi\|449445664\|ref\|XP_004140592.1\|	6.4e-102	97.42	PREDICTED: trafficking protein particle complex subunit 5 [Cucumis sativus]	[more]
gi\|661886287\|emb\|CDP10209.1\|	2.7e-100	95.88	unnamed protein product [Coffea canephora]	[more]
gi\|747074048\|ref\|XP_011084006.1\|	3.5e-100	95.36	PREDICTED: trafficking protein particle complex subunit 5 [Sesamum indicum]	[more]
gi\|802592240\|ref\|XP_012071476.1\|	1.3e-99	94.85	PREDICTED: trafficking protein particle complex subunit 5 [Jatropha curcas]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007194	TRAPP_component
IPR016696	TRAPP-I_su5
IPR024096	NO_sig/Golgi_transp_ligand-bd

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0048193	Golgi vesicle transport
cellular_component	GO:0005622	intracellular
cellular_component	GO:0030008	TRAPP complex
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G009970.1	CmaCh11G009970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007194	Transport protein particle (TRAPP) component	PFAM	PF04051	TRAPP	coord: 30..182 score: 1.5
IPR016696	TRAPP I complex, subunit 5	PIR	PIRSF017479	TRAPP_1_Trs31	coord: 3..194 score: 9.1
IPR016696	TRAPP I complex, subunit 5	PANTHER	PTHR20902	41-2 PROTEIN ANTIGEN-RELATED	coord: 1..193 score: 2.3E
IPR024096	NO signalling/Golgi transport ligand-binding domain	unknown	SSF111126	Ligand-binding domain in the NO signalling and Golgi transport	coord: 23..192 score: 6.28
None	No IPR available	GENE3D	G3DSA:3.30.1380.20		coord: 24..185 score: 6.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G009970	CmoCh11G010150	Cucurbita moschata (Rifu)	cmacmoB112
CmaCh11G009970	Cp4.1LG04g01800	Cucurbita pepo (Zucchini)	cmacpeB147
CmaCh11G009970	Carg16496	Silver-seed gourd	carcmaB1252

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G009970	Cucumber (Gy14) v2	cgybcmaB027
CmaCh11G009970	Cucumber (Gy14) v2	cgybcmaB035
CmaCh11G009970	Melon (DHL92) v3.6.1	cmamedB117
CmaCh11G009970	Melon (DHL92) v3.6.1	cmamedB125
CmaCh11G009970	Cucumber (Chinese Long) v3	cmacucB0099
CmaCh11G009970	Cucumber (Chinese Long) v3	cmacucB0107
CmaCh11G009970	Cucumber (Chinese Long) v3	cmacucB0131
CmaCh11G009970	Watermelon (97103) v2	cmawmbB119
CmaCh11G009970	Watermelon (97103) v2	cmawmbB142
CmaCh11G009970	Wax gourd	cmawgoB0106
CmaCh11G009970	Wax gourd	cmawgoB0169
CmaCh11G009970	Cucurbita maxima (Rimu)	cmacmaB077
CmaCh11G009970	Cucumber (Gy14) v1	cgycmaB0812
CmaCh11G009970	Wild cucumber (PI 183967)	cmacpiB090
CmaCh11G009970	Wild cucumber (PI 183967)	cmacpiB095
CmaCh11G009970	Cucumber (Chinese Long) v2	cmacuB095
CmaCh11G009970	Cucumber (Chinese Long) v2	cmacuB085
CmaCh11G009970	Melon (DHL92) v3.5.1	cmameB109
CmaCh11G009970	Melon (DHL92) v3.5.1	cmameB115
CmaCh11G009970	Watermelon (Charleston Gray)	cmawcgB115
CmaCh11G009970	Watermelon (Charleston Gray)	cmawcgB137
CmaCh11G009970	Watermelon (97103) v1	cmawmB102
CmaCh11G009970	Cucurbita pepo (Zucchini)	cmacpeB164
CmaCh11G009970	Bottle gourd (USVL1VR-Ls)	cmalsiB098
CmaCh11G009970	Bottle gourd (USVL1VR-Ls)	cmalsiB128
CmaCh11G009970	Bottle gourd (USVL1VR-Ls)	cmalsiB139