CmaCh11G009800 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh11G009800
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPeptidyl-prolyl cis-trans isomerase
LocationCma_Chr11 : 5215091 .. 5216414 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TATACTTTAAAAAAAAATTGTAAAAATTTAAAATAGTTTTCCTTTCCCCAGGTCCAATAAAAGAATTAATAGTAACGTGTGGGATATAATTTAAATACCAGAAATAAAAGGATGAGGTTGCAAATTTCTTTCTTAAACCCCCCAAAACCCTAATCTCTGGTACTTTATAAATAACATGATTTCCATAGCATTTGGGACTTGGAGATCCATCCTTCCATCTCCGTCAAAAGGTACTGCCTCTCTCTCTTCCTCTATATCGTCTTCTTCTTCTTCTTCTTCTTCTTCTCTGTTGAAGTATTTTATTTTGCCCTAGAAATTGAGATTGTTGGGTCTGCAAAAGCACATATCGAAGGTTTTCAGGTTCATTTCATAAATGCCTGCTTAGCTCAAAATTTGTGCCATATTATTTACTCGTCTATGGCTCTCCTTAGCACGTCCTTTGGAGTCTAAGACCGGCTTTGTGTCCGGCCTCCAGGGGATTTGGGAGTCATGACGAACATTTGCTTGTTTCTCTTCCAACTTTCATTCATGGGGTTTTCTTCAGTTTCTTTTCTAGATTGTTATAATAAGATGGGAGATGTATGAAGATTCTATTAATTGTTTCATTTTTTTATTGTTTTTTTCTTGTTAATGCTTGTCAATATGATTTTGATTGTTAGTATTTATTAAGAGTGTCGTAAGCTGCACGTATCTGTAGCTTTTAGTTTGATTTTTTCTTTTCTCTCTGGATTCCGGCGTAGTTAGCAAGAGTAATGGGGAAAATACGGTTGTTTTCTGGTAAATGATCTGTTAAAGGACGGATTTTCAAGGAAATCAGTTCTGAAATATGCTATCTGATGGGGAATTGTGTTTTCAAGACACTCGTTCATGTTAAACATGTCTTATATATAAATATCATAATTGAGCTTCGTAGACTATCAAGGAAATTGTGGATTAGGTGAACGTTTTTGTACCAAAGAAATTGTGAGTAACAATATTATCAACTTACTAAACTATGCGAACTTGACATCATTCTTGAAATCTCCATATTTTTGTGTTCGATCTTTTGAAGATCTGTAATTGTTTTGCTTTCTGTTCACTGGTAAGCGTGGAAAAGCTAAAGATTTTGATTTGACGAGTGTATTGGCAGCGAACGATGTCGAACCCAAAAGTATTCTTTGATATTTTGATTGGGAAGATGAAAGCAGGGCGGATTGTGATGGAGCTGTTTGCCGACACAACTCCAAAAACTGCAGAGAATTTCCGAGCTCTCTGCACAGGGGAGAAGGGGATTGGGAGATCCGGAAAGTCTTACACTACAAAGGCTCAACATTTCACCGTGTAA

mRNA sequence

TATACTTTAAAAAAAAATTGTAAAAATTTAAAATAGTTTTCCTTTCCCCAGGTCCAATAAAAGAATTAATAGTAACGTGTGGGATATAATTTAAATACCAGAAATAAAAGGATGAGGTTGCAAATTTCTTTCTTAAACCCCCCAAAACCCTAATCTCTGGTACTTTATAAATAACATGATTTCCATAGCATTTGGGACTTGGAGATCCATCCTTCCATCTCCGTCAAAAGAGTGTCGTAAGCTGCACCGAACGATGTCGAACCCAAAAGTATTCTTTGATATTTTGATTGGGAAGATGAAAGCAGGGCGGATTGTGATGGAGCTGTTTGCCGACACAACTCCAAAAACTGCAGAGAATTTCCGAGCTCTCTGCACAGGGGAGAAGGGGATTGGGAGATCCGGAAAGTCTTACACTACAAAGGCTCAACATTTCACCGTGTAA

Coding sequence (CDS)

ATGATTTCCATAGCATTTGGGACTTGGAGATCCATCCTTCCATCTCCGTCAAAAGAGTGTCGTAAGCTGCACCGAACGATGTCGAACCCAAAAGTATTCTTTGATATTTTGATTGGGAAGATGAAAGCAGGGCGGATTGTGATGGAGCTGTTTGCCGACACAACTCCAAAAACTGCAGAGAATTTCCGAGCTCTCTGCACAGGGGAGAAGGGGATTGGGAGATCCGGAAAGTCTTACACTACAAAGGCTCAACATTTCACCGTGTAA

Protein sequence

MISIAFGTWRSILPSPSKECRKLHRTMSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHFTV
Homology
[Close]
BLAST of CmaCh11G009800 vs. Swiss-Prot
Match: CP19C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 PE=2 SV=2)

HSP 1 Score: 97.4 bits (241), Expect = 8.1e-20
Identity = 45/60 (75.00%), Postives = 51/60 (85.00%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          M+NPKVFFDILIGKMKAGR+VMELFAD TP+TA NFRALCTGE GIG++GK+   K   F
Sbjct: 1  MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60

[Close]
BLAST of CmaCh11G009800 vs. Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.6e-18
Identity = 43/60 (71.67%), Postives = 48/60 (80.00%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          M+NPKVFFD+ IG   AGR+VMELFADTTPKTAENFRALCTGEKG+G+ GK    K   F
Sbjct: 1  MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKGVGKMGKPLHYKGSTF 60

[Close]
BLAST of CmaCh11G009800 vs. Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.4e-18
Identity = 44/60 (73.33%), Postives = 48/60 (80.00%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          MSNPKVFFD+ I    AGRIVMEL+ADTTP+TAENFRALCTGEKG+GRSGK    K   F
Sbjct: 1  MSNPKVFFDMAIAGNPAGRIVMELYADTTPRTAENFRALCTGEKGVGRSGKPLHYKGSTF 60

[Close]
BLAST of CmaCh11G009800 vs. Swiss-Prot
Match: CYP1_SOYBN (Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max GN=Cyp1 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 4.4e-18
Identity = 43/60 (71.67%), Postives = 47/60 (78.33%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          M NPKVFFD+ IG   AGRIVMEL+AD TP+TAENFRALCTGEKG+GRSGK    K   F
Sbjct: 1  MPNPKVFFDMTIGGQSAGRIVMELYADVTPRTAENFRALCTGEKGVGRSGKPLHYKGSSF 60

[Close]
BLAST of CmaCh11G009800 vs. Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-17
Identity = 43/60 (71.67%), Postives = 47/60 (78.33%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          M NP+VFFD+ +G   AGRIVMELFADTTP+TAENFRALCTGEKG GRSGK    K   F
Sbjct: 1  MPNPRVFFDMSVGGQPAGRIVMELFADTTPRTAENFRALCTGEKGTGRSGKPLHYKDSSF 60

[Close]
BLAST of CmaCh11G009800 vs. TrEMBL
Match: A0A059D3H3_EUCGR (Peptidyl-prolyl cis-trans isomerase OS=Eucalyptus grandis GN=EUGRSUZ_B02135 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 4.3e-20
Identity = 51/60 (85.00%), Postives = 52/60 (86.67%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          MSNPKVFFDILIGKMKAGR+VMELFAD TPKTAENFRALCTGEKGIGRSGK    K   F
Sbjct: 1  MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60

[Close]
BLAST of CmaCh11G009800 vs. TrEMBL
Match: A5B709_VITVI (Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=VIT_14s0081g00700 PE=3 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-19
Identity = 50/60 (83.33%), Postives = 51/60 (85.00%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          MSNPKVFFDIL+GKMKAGRIVMELFAD TPKTAENFRALCTGEKGIG SGK    K   F
Sbjct: 1  MSNPKVFFDILVGKMKAGRIVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSAF 60

[Close]
BLAST of CmaCh11G009800 vs. TrEMBL
Match: V7CRU4_PHAVU (Peptidyl-prolyl cis-trans isomerase OS=Phaseolus vulgaris GN=PHAVU_002G284200g PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.8e-19
Identity = 49/58 (84.48%), Postives = 51/58 (87.93%), Query Frame = 1 

Query: 29 NPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 87
          NPKVFFDILIGKMKAGR+VMELFADTTPKTAENFRALCTGEKGIG+SGK    K   F
Sbjct: 4  NPKVFFDILIGKMKAGRVVMELFADTTPKTAENFRALCTGEKGIGQSGKPLHYKGSSF 61

[Close]
BLAST of CmaCh11G009800 vs. TrEMBL
Match: A9PA45_POPTR (Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0078s00220g PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.8e-19
Identity = 50/60 (83.33%), Postives = 51/60 (85.00%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          MSNPKVFFDILIGKMKAGRIVMELFAD TPKTAENFRALCTGEKGIG +GK    K   F
Sbjct: 1  MSNPKVFFDILIGKMKAGRIVMELFADATPKTAENFRALCTGEKGIGNAGKPLHYKGSTF 60

[Close]
BLAST of CmaCh11G009800 vs. TrEMBL
Match: A0A0S3QXS0_PHAAN (Peptidyl-prolyl cis-trans isomerase OS=Vigna angularis var. angularis GN=Vigan.01G059700 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 3.6e-19
Identity = 49/58 (84.48%), Postives = 51/58 (87.93%), Query Frame = 1 

Query: 29 NPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 87
          NPKVFFDILIGKMKAGR+VMELFADTTPKTAENFRALCTGEKGIG+SGK    K   F
Sbjct: 4  NPKVFFDILIGKMKAGRVVMELFADTTPKTAENFRALCTGEKGIGQSGKPLHYKGSTF 61

[Close]
BLAST of CmaCh11G009800 vs. TAIR10
Match: AT3G56070.1 (AT3G56070.1 rotamase cyclophilin 2)

HSP 1 Score: 97.4 bits (241), Expect = 4.5e-21
Identity = 45/60 (75.00%), Postives = 51/60 (85.00%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          M+NPKVFFDILIGKMKAGR+VMELFAD TP+TA NFRALCTGE GIG++GK+   K   F
Sbjct: 1  MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60

[Close]
BLAST of CmaCh11G009800 vs. TAIR10
Match: AT2G21130.1 (AT2G21130.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 87.0 bits (214), Expect = 6.1e-18
Identity = 41/59 (69.49%), Postives = 46/59 (77.97%), Query Frame = 1 

Query: 28 SNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 87
          S+PKVFFD+ IG   AG+IVMEL+ D TPKTAENFRALCTGEKG+GRSGK    K   F
Sbjct: 3  SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSF 61

[Close]
BLAST of CmaCh11G009800 vs. TAIR10
Match: AT2G16600.1 (AT2G16600.1 rotamase CYP 3)

HSP 1 Score: 86.7 bits (213), Expect = 8.0e-18
Identity = 39/59 (66.10%), Postives = 47/59 (79.66%), Query Frame = 1 

Query: 28 SNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 87
          +NPKV+FD+ +G   AGRIVMEL+ADTTP+TAENFRALCTGE+GIG+ GK    K   F
Sbjct: 3  TNPKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSF 61

[Close]
BLAST of CmaCh11G009800 vs. TAIR10
Match: AT3G22920.1 (AT3G22920.1 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 82.4 bits (202), Expect = 1.5e-16
Identity = 38/60 (63.33%), Postives = 45/60 (75.00%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          M+NPKVFFD+ +    AGRIV+ELFAD TP+TAENFR LCTGE+GIG+ GK    K   F
Sbjct: 1  MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60

[Close]
BLAST of CmaCh11G009800 vs. TAIR10
Match: AT4G34870.1 (AT4G34870.1 rotamase cyclophilin 5)

HSP 1 Score: 81.3 bits (199), Expect = 3.4e-16
Identity = 39/60 (65.00%), Postives = 44/60 (73.33%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          MSNP+VFFD+ +     GRI MELFADTTP TAENFRALCTGEKG+G+ GK    K   F
Sbjct: 1  MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60

[Close]
BLAST of CmaCh11G009800 vs. NCBI nr
Match: gi|702270000|ref|XP_010043281.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X3 [Eucalyptus grandis])

HSP 1 Score: 105.1 bits (261), Expect = 6.2e-20
Identity = 51/60 (85.00%), Postives = 52/60 (86.67%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          MSNPKVFFDILIGKMKAGR+VMELFAD TPKTAENFRALCTGEKGIGRSGK    K   F
Sbjct: 1  MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 60

[Close]
BLAST of CmaCh11G009800 vs. NCBI nr
Match: gi|702269984|ref|XP_010043279.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X1 [Eucalyptus grandis])

HSP 1 Score: 105.1 bits (261), Expect = 6.2e-20
Identity = 51/60 (85.00%), Postives = 52/60 (86.67%), Query Frame = 1 

Query: 27  MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
           MSNPKVFFDILIGKMKAGR+VMELFAD TPKTAENFRALCTGEKGIGRSGK    K   F
Sbjct: 44  MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 103

[Close]
BLAST of CmaCh11G009800 vs. NCBI nr
Match: gi|702269993|ref|XP_010043280.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X2 [Eucalyptus grandis])

HSP 1 Score: 105.1 bits (261), Expect = 6.2e-20
Identity = 51/60 (85.00%), Postives = 52/60 (86.67%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          MSNPKVFFDILIGKMKAGR+VMELFAD TPKTAENFRALCTGEKGIGRSGK    K   F
Sbjct: 17 MSNPKVFFDILIGKMKAGRVVMELFADVTPKTAENFRALCTGEKGIGRSGKPLHYKGSTF 76

[Close]
BLAST of CmaCh11G009800 vs. NCBI nr
Match: gi|731416963|ref|XP_010660113.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Vitis vinifera])

HSP 1 Score: 102.8 bits (255), Expect = 3.1e-19
Identity = 50/60 (83.33%), Postives = 51/60 (85.00%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          MSNPKVFFDIL+GKMKAGRIVMELFAD TPKTAENFRALCTGEKGIG SGK    K   F
Sbjct: 1  MSNPKVFFDILVGKMKAGRIVMELFADVTPKTAENFRALCTGEKGIGMSGKPLHYKGSAF 60

[Close]
BLAST of CmaCh11G009800 vs. NCBI nr
Match: gi|729338125|ref|XP_010539096.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Tarenaya hassleriana])

HSP 1 Score: 102.8 bits (255), Expect = 3.1e-19
Identity = 49/60 (81.67%), Postives = 52/60 (86.67%), Query Frame = 1 

Query: 27 MSNPKVFFDILIGKMKAGRIVMELFADTTPKTAENFRALCTGEKGIGRSGKSYTTKAQHF 86
          MSNP+VFFDILIGKMKAGR+VMELFAD TPKTAENFRALCTGEKGIGR+GK    K   F
Sbjct: 1  MSNPRVFFDILIGKMKAGRVVMELFADVTPKTAENFRALCTGEKGIGRAGKPLHYKGSAF 60

The following BLAST results are available for this feature:
BLAST of CmaCh11G009800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CP19C_ARATH8.1e-2075.00Peptidyl-prolyl cis-trans isomerase CYP19-3 OS=Arabidopsis thaliana GN=CYP19-3 P... [more]
CYPH_SOLLC2.6e-1871.67Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1[more]
CYPH_LUPLU4.4e-1873.33Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1[more]
CYP1_SOYBN4.4e-1871.67Peptidyl-prolyl cis-trans isomerase 1 OS=Glycine max GN=Cyp1 PE=2 SV=1[more]
CYPH_CATRO1.3e-1771.67Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=1 SV=1[more]
BLAST of CmaCh11G009800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A059D3H3_EUCGR4.3e-2085.00Peptidyl-prolyl cis-trans isomerase OS=Eucalyptus grandis GN=EUGRSUZ_B02135 PE=3... [more]
A5B709_VITVI2.1e-1983.33Peptidyl-prolyl cis-trans isomerase OS=Vitis vinifera GN=VIT_14s0081g00700 PE=3 ... [more]
V7CRU4_PHAVU2.8e-1984.48Peptidyl-prolyl cis-trans isomerase OS=Phaseolus vulgaris GN=PHAVU_002G284200g P... [more]
A9PA45_POPTR2.8e-1983.33Peptidyl-prolyl cis-trans isomerase OS=Populus trichocarpa GN=POPTR_0078s00220g ... [more]
A0A0S3QXS0_PHAAN3.6e-1984.48Peptidyl-prolyl cis-trans isomerase OS=Vigna angularis var. angularis GN=Vigan.0... [more]
BLAST of CmaCh11G009800 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G56070.14.5e-2175.00 rotamase cyclophilin 2[more]
AT2G21130.16.1e-1869.49 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein[more]
AT2G16600.18.0e-1866.10 rotamase CYP 3[more]
AT3G22920.11.5e-1663.33 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein[more]
AT4G34870.13.4e-1665.00 rotamase cyclophilin 5[more]
BLAST of CmaCh11G009800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|702270000|ref|XP_010043281.1|6.2e-2085.00PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X3 [Eucalypt... [more]
gi|702269984|ref|XP_010043279.1|6.2e-2085.00PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X1 [Eucalypt... [more]
gi|702269993|ref|XP_010043280.1|6.2e-2085.00PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3-like isoform X2 [Eucalypt... [more]
gi|731416963|ref|XP_010660113.1|3.1e-1983.33PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Vitis vinifera][more]
gi|729338125|ref|XP_010539096.1|3.1e-1981.67PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-3 [Tarenaya hassleriana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR024936Cyclophilin-type_PPIase
Vocabulary: Biological Process
TermDefinition
GO:0000413protein peptidyl-prolyl isomerization
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0003755peptidyl-prolyl cis-trans isomerase activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0001510 RNA methylation
biological_process GO:0006364 rRNA processing
biological_process GO:0007165 signal transduction
cellular_component GO:0005829 cytosol
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0016018 cyclosporin A binding
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G009800.1CmaCh11G009800.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 40..68
score: 9.
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROFILEPS50072CSA_PPIASE_2coord: 33..88
score: 11
IPR024936Cyclophilin-type peptidyl-prolyl cis-trans isomerasePANTHERPTHR11071PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 27..77
score: 2.1
NoneNo IPR availablePANTHERPTHR11071:SF252PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP18-3-RELATEDcoord: 27..77
score: 2.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh11G009800CmoCh10G010660Cucurbita moschata (Rifu)cmacmoB109
CmaCh11G009800Cp4.1LG05g08450Cucurbita pepo (Zucchini)cmacpeB157
CmaCh11G009800CsaV3_1G045550Cucumber (Chinese Long) v3cmacucB0099
CmaCh11G009800Bhi02G001030Wax gourdcmawgoB0169
CmaCh11G009800CsGy1G032230Cucumber (Gy14) v2cgybcmaB027
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh11G009800CmaCh10G010110Cucurbita maxima (Rimu)cmacmaB082
The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh11G009800Silver-seed gourdcarcmaB1252
CmaCh11G009800Cucumber (Chinese Long) v3cmacucB0131
CmaCh11G009800Watermelon (97103) v2cmawmbB142
CmaCh11G009800Wax gourdcmawgoB0106
CmaCh11G009800Cucurbita maxima (Rimu)cmacmaB077
CmaCh11G009800Cucumber (Gy14) v1cgycmaB0816
CmaCh11G009800Cucurbita moschata (Rifu)cmacmoB112
CmaCh11G009800Wild cucumber (PI 183967)cmacpiB090
CmaCh11G009800Cucumber (Chinese Long) v2cmacuB085
CmaCh11G009800Melon (DHL92) v3.5.1cmameB109
CmaCh11G009800Watermelon (Charleston Gray)cmawcgB137
CmaCh11G009800Cucurbita pepo (Zucchini)cmacpeB147
CmaCh11G009800Cucurbita pepo (Zucchini)cmacpeB164
CmaCh11G009800Bottle gourd (USVL1VR-Ls)cmalsiB098
CmaCh11G009800Bottle gourd (USVL1VR-Ls)cmalsiB128
CmaCh11G009800Melon (DHL92) v3.6.1cmamedB117