CmaCh11G009530 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G009530
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Location	Cma_Chr11 : 5035337 .. 5040916 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCCACTCTTCCGTCCATTTCACTTCGAGCAATGAACCCGTCTCTTCCATCTTCCAACCTAACTTTCCCCAAGTTTCAGCCCTCAAACCCTAACCCTAATTTCTCTCTTCCCGATTCTCGTGAGCCTCCTCTGGACTTGTCTTCTTCTCTTTCCTCCCTCAGAAACCTCATCCATGTCGCCAACCAGACCCTTCAATCTCTCTCCTACCTCACCCTCATTCAAACCCCATCTGCTAAGCCTGACGATTCCGGTTTCGTTCAGTGCAATTTTGATCGGCGCCACCGTGTTCCGCCGCATTCTCTCTTCCACCACTCCCTCCTTTGCCCTTCCGCTCCTCCTCCTCGTATCGACCCGACCCAACTCCTCCAGTCCTTGCTTTACCCCCGAACGCTTCAATCGTCTCGTGAGTTGGTTAACGAAAAGCGCTTCCGTCAAACGATGCCGGATTCTGATGCCGACCTTTGTTTCTCTCTCAATGATTATTCTGATGGAAGTTCCAATTTCTTCTATCTCGATTGCCCTGGCGTGGTTGCCTTGTCTAACCGGGATGAAATGTCTAAAGTCTTCACTCTCCCTCGTGTTTTGGCTGTTGAATGTGCTAATTTTGTTTGTGATGATGATGGTGATCGAGAGATGAAGAGTTCGTTGAAGGGGATTCGAATGCTGCCCTCTGATCTGTGGGCTCTTAGAGGTGAAGTAGAAATGTGGAATGACTACCCCAGTGTGTATTCGCATATTGTTATACGGTCCATATTGGGCTCAGAGATGGCCGTGGACAACCGTTTGAAGACATGGATCATTGCAAATTCTCCTCGGTATGGTGTTATTATTGATGTTGCTATGAGGGATCACATATTTTTGCTGTTTAGGCTGTGTTTTATGGCAATTTCAAAGGAAGCTATGGGATTTCAAATTGCGCTGGAAAATGGAAATGGAATGGAGGGTGGATCAGGGAACCTCAGTTTTAAGTGTCCGATTTTAGTGCAAGTACTATTGTGGCTGGCATCTCAGCTCTCCGTATTGTATGGGGAGATGAGCGGGAAGTTCTTTGCTATTAACATGCTTAGACAACGTATACTATATGCTGCATCGGGCTTGTCGCTTTTGCCATACGAACAAAAGCGAGTGGAGAGTCCAACTTTGGTAGAGGGCTCTCATAATCTAGTATCTAGTTGTAGCGACACACAGAGTGTGAATTTGAAAAAGTTGGATATGAAGGTTATAAATAATGTCTATGTTACTGGAGAAGAAACGGTCAACTGCAGGGTGATTTTTGTGTCCCAAGTCGCTGCGGCTGTTGCAGCATTGCATGAGCGTTTCCTACTTGAAGAAAAGATCAAAGCTTTACGTTTTTCTCATCTGCAAACTAAACATCAGCTGTATGTTACTTCTCCATATTCTGTTTTTTGGTTACTAGTTTTGATGAACTTGATGTTTTCCTTATTGCTATGATTGTGATATTCATTGATCCAACAAGTTTATGCTTATCATTCATGAGGTGGAAAATAATTGTTAGGAGACTTAGAGGAAATGGGTTTAAATCCATGTCTTCCTTCCTAGGATATAAAAATTTTACGAGTTTCTTTGGCAACCAAATATTGTAGGGTAGGATGTTTGTCCTGTTATATTAGAAAGTGAACTCAAATTTGTCCGAACTTTCATAGTGATTAAGAAAAAAAAGATGATCGAAGGGATTTTAGAGTCTTGTGTCTAAAAAAGATGGCCGAACAGCTTCTAGAATCTGTCTTTCGAAGCCCTTGTCATAAATATGCTTAAACATTTTAAGGACATCATTTCTAGCTATACTAGCTGTGTTTGAAAATTTTTTCAACAGAATTCTTAGCACCTGGAGATTTAAGTTGCCTAGCCCCTTAACTAGCTTTTGAAACTCAAATTAATGGTTGAACCTAGCACTATCAGCTCTAGAAAGTGGACTCCAGTTTATGTGTACAGCAGTAATTCTTGGAATTTAGGGTTTAAATGCTAGAAGTAAGCTAGAAGTAACAGAACTTTTCCCCTTCTATTGAGTTCAATTAATCTTCATTTTTCTTTCAGTTGCAATTTTATGGAAAAGGATGTTCTGAGTTTTCATCTGCCTCTTTCATCCAATTTAATCTGCACATTTTGTTCCACTTGTCTTCACGATTTCATCAAAAGAATTCTCGTACTAAGAAAAGGATCTCACTTTTCAAGTAGGTAACTGTTAGAAACAGACTAATCCTTTAACTCTTTTAGGGTTTCTGAACATAACTATATCTCTCAAAGAGCTTGTGAAGAGCGTAAAAGACGGTGCAGCTATAGACCTATAATTGAGCATGATGGACTCCCAAAGCAGCAGTCTCATGATGAGGTATTTCTGAACTCTGTAATGGTCTAGTCATGAATTATGTAGTTGGTATAATCAAGCATGTTATTTTCAGTTGTCCTTCCACCTGGATTACTCTTCCTACCAATTTTCTCCATTCATTTGTTGGTGATTTGAAGTCTCGCCGAATCTTCTTATTTACTGCCCTGAATGGTACATCATGTGCAGAAAAAGATTTTTAAAAAAATATATAAAAAAAAAAAGCTTTCAATTCCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATATATATATATATATATATATATATTTGTTAAATTAACTTCTTGGAACCAAATCAAGCTGGTGCCTCTATATACTTATTTTTTGGGTGTGTATTGTAGAGTCTCTTAGGAGCTTTTGAGATGGATGTTTTGCCGTTCTTTCCTTCATTTTGTGCATCTCCTCCCATTATATTTTATGTTAAAAGAATAAACTTACTGTAGCAATAAATGATGAAGCAGGTGCTGATCAGCTGCTTATTGTTCACTTACCCATGATGTTTCTTGGCTATATTTTATATCTTATGGGTTTAATTTTAATAAAAGCAGGATAGAGACAAGACCAAAACAAAAGAGGAATTGTTGGCTGAAGAAAGGGATTATAAACGTCGAAGAATGTCATACCGTGGGAAAAAGGCAAAGCGATCAACTTTACAGGTAAGCAAACAGCTTGTTCAATTTTACGTCAGCCATTGTTTTTGTTATCTCGTCTCTTTTGGCTATTAGCCTAGAGTCTAACTGGGTATGGCATGATGATTCCTTTTCTTATAGCCTTTTATGGAAAATTGACAAAGTTCTTAATTATATGATAATGCTTATCAAGAACATTTGATGGTAATATCTTCTTAGGCGTACATTGGTCACTTTTTAGAATATTATTCACAACTTTCAAGCCACTAAGATTGCAGCAACAATGGCCGAATTATGGAAGATGTGAATCTGCAATGCTAAATAGACCATGAAACTATGTGATACCCATTATGTATTTTCGGTTCCTGAAATATGTTCTGACATCTGTTTTCCAACTTTTTCTATCAAACGTTTTTATGTTAGATGTTATCCACACTCATGTTCTTACTAATTTTACCTTTCATGGAAGGTTACAAGAGATATTATTGAAGAATACATGGACGAAATTATGAAAGCTGGAGGGATTGGATACTTTGTGAAGGGAACTGAAGAGAGAGGGATAAAATCTGAACAACCAACTGATCATTACATTACAAGAGATAGTATTGCTGATGGGCACACAAAAGGAAGCAACAGCTCATATGGAGAAACTAGGCATCATAGCTCAAGTCATTCCCGGAAGCAGTCTAACTATGATAACAGATATTCAGCATCCGAAAAGCCCCCAAAAGGTAGGTGTGGGCACTATGGTTCTCCAGAAGATGAAAGGAAAGGTGTCAGTAAAGACAAATATGATCGAGAACACTATCATAGATTCTCAAATCGAAGCAGTAGTCCTAGCCAGTCACACAAATGGAAGAGATATCCAAGTGATCGAGATGATGAGGAGCCAGCAGAAACCAGGCATCATAAATCTCGAGGACTGTCTTCTAGCAGCTCTAATTATCATGGTTTTAGATCATCTTCATCCTCAAGATCGGGGGGCAATTCTAGTGCAAGGAAGGATGATCATAAATTAAGAGCTAGTGATAGTTGGAAAAGGAACACAGCTGATAATCATAGTTCAGATTCTTTGGTGCTTAATTCATTTAATGATAGATATACCCCTTCCAAGTGTCATGACCAATTGGAAGATGATCACTCCGCTGGCAGAAGATATGTAAATCCAGACGAACTTTAGTTTGCTGATCCTCAAATGAGGGGCTGTCCCGCAAATTGTGCCATACTTTTTAACATTACCAATGTCTACCTTGTGGTAAGTCTTTCTTTCATGCTACATCCCATGTGCCTTTAACTGTGACTTCTATGACTTCTTTTTTTAACATGTTTTATTCACACAACCTTGCAGCATATGGGCTTCAGAAATTTTATCCTCACATGTATCCTTCATAGTATCCTTGAAGTTTATCCCATTTTCTTATACATTAAATCTTGCATAACTTTTTCTTTCCTTGTTTTTTTTTTGTCCCCTTAGCAGGGATATTTGCCCTGAATGTTGCAGTAGCATAATTTGAACTCATCGTCACTGTATCAAAAATGCCAATTTTACATCATCCTTTTCTGTTCTGGGGTTTTCTAATATTTCTGGACTAGTCACAATGACAGATAAACAAAGTGGTCGTATTGGCGTGGATTTTCCATGTCGTACGATTGTTTCTTAATGTCCTCATTTGCTATGGTTTCCACTACTCTGGGAAATGTTTTGGTGTTGCATAACTTGTCCTTTTCCTGTTCTCTTCAGTCATGATTGGTATCGGTCGTTTAAAGTTTTACAACGACATTTTATAAATAATAATAATTAAAAAAAATATCATTGAGTAGACCAAAGTTGTTCTCAGTTGAAGAATTCCTAGTTCAAGAAACTGAGATGAGGTAGTATGAGCGTGGTAGAGTTTCAATATGCATGTTGATGATTTCACTTCAAAAACTTACATGTAGGTCATTATAAAACGGAACACACCATTAATCTAGCATCTTAACAAACATTTTACACTACTACACTGCTTGAATTCAACCTTTTTCTTGATCTTATATTAGTTCTAACTATTGTATTACCTTTAGTGTTCTACCAACAGCTCACAAGATCAGAGAAGTATGAAGGCAGTCTGCAAATAAACTTGATCAGAAACCACAATCCACAGAGTTTCAGATCATCGGTTGCAGGCCGTTCCATCCTACATCATGCTGCTAATTAGCTTCTTATCAATTATAGAAGGTATGAATTCTGACTCGCTGGTATATTTTTCTCCTTTTGGGCAGCCCATGTGAATATTTAGATACATGTACATTGTTGGAAAAGTTGAAAAGATATGAAGCGATAGGAGGAAAGGGATATGCAGAAATCTCTTACAAGATAGCTTAGGAGTTTGTATAGGTAGGTATGAAATAGTTAGCAGGTAAAGTAGGTAGTTTCTTCCATTTACTTACAAGTAGGAATTCATTGTGTAATGACCTCTATTATTATCATTATTTTTGTAGTATTTTAGTATACTGGGTGTATTTTTAATTGTATTACCTCAGATATTGAATCCAAGATTTTAAATTTGAATGTCTCAATTTCTAA

mRNA sequence

TCCCACTCTTCCGTCCATTTCACTTCGAGCAATGAACCCGTCTCTTCCATCTTCCAACCTAACTTTCCCCAAGTTTCAGCCCTCAAACCCTAACCCTAATTTCTCTCTTCCCGATTCTCGTGAGCCTCCTCTGGACTTGTCTTCTTCTCTTTCCTCCCTCAGAAACCTCATCCATGTCGCCAACCAGACCCTTCAATCTCTCTCCTACCTCACCCTCATTCAAACCCCATCTGCTAAGCCTGACGATTCCGGTTTCGTTCAGTGCAATTTTGATCGGCGCCACCGTGTTCCGCCGCATTCTCTCTTCCACCACTCCCTCCTTTGCCCTTCCGCTCCTCCTCCTCGTATCGACCCGACCCAACTCCTCCAGTCCTTGCTTTACCCCCGAACGCTTCAATCGTCTCGTGAGTTGGTTAACGAAAAGCGCTTCCGTCAAACGATGCCGGATTCTGATGCCGACCTTTGTTTCTCTCTCAATGATTATTCTGATGGAAGTTCCAATTTCTTCTATCTCGATTGCCCTGGCGTGGTTGCCTTGTCTAACCGGGATGAAATGTCTAAAGTCTTCACTCTCCCTCGTGTTTTGGCTGTTGAATGTGCTAATTTTGTTTGTGATGATGATGGTGATCGAGAGATGAAGAGTTCGTTGAAGGGGATTCGAATGCTGCCCTCTGATCTGTGGGCTCTTAGAGGTGAAGTAGAAATGTGGAATGACTACCCCAGTGTGTATTCGCATATTGTTATACGGTCCATATTGGGCTCAGAGATGGCCGTGGACAACCGTTTGAAGACATGGATCATTGCAAATTCTCCTCGGTATGGTGTTATTATTGATGTTGCTATGAGGGATCACATATTTTTGCTGTTTAGGCTGTGTTTTATGGCAATTTCAAAGGAAGCTATGGGATTTCAAATTGCGCTGGAAAATGGAAATGGAATGGAGGGTGGATCAGGGAACCTCAGTTTTAAGTGTCCGATTTTAGTGCAAGTACTATTGTGGCTGGCATCTCAGCTCTCCGTATTGTATGGGGAGATGAGCGGGAAGTTCTTTGCTATTAACATGCTTAGACAACGTATACTATATGCTGCATCGGGCTTGTCGCTTTTGCCATACGAACAAAAGCGAGTGGAGAGTCCAACTTTGGTAGAGGGCTCTCATAATCTAGTATCTAGTTGTAGCGACACACAGAGTGTGAATTTGAAAAAGTTGGATATGAAGGTTATAAATAATGTCTATGTTACTGGAGAAGAAACGGTCAACTGCAGGGTGATTTTTGTGTCCCAAGTCGCTGCGGCTGTTGCAGCATTGCATGAGCGTTTCCTACTTGAAGAAAAGATCAAAGCTTTACGTTTTTCTCATCTGCAAACTAAACATCAGCTGGTTTCTGAACATAACTATATCTCTCAAAGAGCTTGTGAAGAGCGTAAAAGACGGTGCAGCTATAGACCTATAATTGAGCATGATGGACTCCCAAAGCAGCAGTCTCATGATGAGGATAGAGACAAGACCAAAACAAAAGAGGAATTGTTGGCTGAAGAAAGGGATTATAAACGTCGAAGAATGTCATACCGTGGGAAAAAGGCAAAGCGATCAACTTTACAGGTTACAAGAGATATTATTGAAGAATACATGGACGAAATTATGAAAGCTGGAGGGATTGGATACTTTGTGAAGGGAACTGAAGAGAGAGGGATAAAATCTGAACAACCAACTGATCATTACATTACAAGAGATAGTATTGCTGATGGGCACACAAAAGGAAGCAACAGCTCATATGGAGAAACTAGGCATCATAGCTCAAGTCATTCCCGGAAGCAGTCTAACTATGATAACAGATATTCAGCATCCGAAAAGCCCCCAAAAGGTAGGTGTGGGCACTATGGTTCTCCAGAAGATGAAAGGAAAGGTGTCAGTAAAGACAAATATGATCGAGAACACTATCATAGATTCTCAAATCGAAGCAGTAGTCCTAGCCAGTCACACAAATGGAAGAGATATCCAAGTGATCGAGATGATGAGGAGCCAGCAGAAACCAGGCATCATAAATCTCGAGGACTGTCTTCTAGCAGCTCTAATTATCATGGTTTTAGATCATCTTCATCCTCAAGATCGGGGGGCAATTCTAGTGCAAGGAAGGATGATCATAAATTAAGAGCTAGTGATAGTTGGAAAAGGAACACAGCTGATAATCATAGTTCAGATTCTTTGGTGCTTAATTCATTTAATGATAGATATACCCCTTCCAAGTGTCATGACCAATTGGAAGATGATCACTCCGCTGGCAGAAGATATGTAAATCCAGACGAACTTTAGTTTGCTGATCCTCAAATGAGGGGCTGTCCCGCAAATTGTGCCATACTTTTTAACATTACCAATGTCTACCTTGTGCATATGGGCTTCAGAAATTTTATCCTCACATGTATCCTTCATAGTATCCTTGAAGTTTATCCCATTTTCTTATACATTAAATCTTGCATAACTTTTTCTTTCCTTGTTTTTTTTTTGTCCCCTTAGCAGGGATATTTGCCCTGAATGTTGCAGTAGCATAATTTGAACTCATCGTCACTGTATCAAAAATGCCAATTTTACATCATCCTTTTCTGTTCTGGGGTTTTCTAATATTTCTGGACTAGTCACAATGACAGATAAACAAAGTGGTCGTATTGGCGTGGATTTTCCATGTCGTACGATTGTTTCTTAATGTCCTCATTTGCTATGGTTTCCACTACTCTGGGAAATGTTTTGGTGTTGCATAACTTGTCCTTTTCCTGTTCTCTTCAGTCATGATTGGTATCGGTCGTTTAAAGTTTTACAACGACATTTTATAAATAATAATAATTAAAAAAAATATCATTGAGTAGACCAAAGTTGTTCTCAGTTGAAGAATTCCTAGTTCAAGAAACTGAGATGAGGTAGTATGAGCGTGGTAGAGTTTCAATATGCATGTTGATGATTTCACTTCAAAAACTTACATGTAGGTCATTATAAAACGGAACACACCATTAATCTAGCATCTTAACAAACATTTTACACTACTACACTGCTTGAATTCAACCTTTTTCTTGATCTTATATTAGTTCTAACTATTGTATTACCTTTAGTGTTCTACCAACAGCTCACAAGATCAGAGAAGTATGAAGGCAGTCTGCAAATAAACTTGATCAGAAACCACAATCCACAGAGTTTCAGATCATCGGTTGCAGGCCGTTCCATCCTACATCATGCTGCTAATTAGCTTCTTATCAATTATAGAAGGTATGAATTCTGACTCGCTGGTATATTTTTCTCCTTTTGGGCAGCCCATGTGAATATTTAGATACATGTACATTGTTGGAAAAGTTGAAAAGATATGAAGCGATAGGAGGAAAGGGATATGCAGAAATCTCTTACAAGATAGCTTAGGAGTTTGTATAGGTAGGTATGAAATAGTTAGCAGGTAAAGTAGGTAGTTTCTTCCATTTACTTACAAGTAGGAATTCATTGTGTAATGACCTCTATTATTATCATTATTTTTGTAGTATTTTAGTATACTGGGTGTATTTTTAATTGTATTACCTCAGATATTGAATCCAAGATTTTAAATTTGAATGTCTCAATTTCTAA

Coding sequence (CDS)

ATGAACCCGTCTCTTCCATCTTCCAACCTAACTTTCCCCAAGTTTCAGCCCTCAAACCCTAACCCTAATTTCTCTCTTCCCGATTCTCGTGAGCCTCCTCTGGACTTGTCTTCTTCTCTTTCCTCCCTCAGAAACCTCATCCATGTCGCCAACCAGACCCTTCAATCTCTCTCCTACCTCACCCTCATTCAAACCCCATCTGCTAAGCCTGACGATTCCGGTTTCGTTCAGTGCAATTTTGATCGGCGCCACCGTGTTCCGCCGCATTCTCTCTTCCACCACTCCCTCCTTTGCCCTTCCGCTCCTCCTCCTCGTATCGACCCGACCCAACTCCTCCAGTCCTTGCTTTACCCCCGAACGCTTCAATCGTCTCGTGAGTTGGTTAACGAAAAGCGCTTCCGTCAAACGATGCCGGATTCTGATGCCGACCTTTGTTTCTCTCTCAATGATTATTCTGATGGAAGTTCCAATTTCTTCTATCTCGATTGCCCTGGCGTGGTTGCCTTGTCTAACCGGGATGAAATGTCTAAAGTCTTCACTCTCCCTCGTGTTTTGGCTGTTGAATGTGCTAATTTTGTTTGTGATGATGATGGTGATCGAGAGATGAAGAGTTCGTTGAAGGGGATTCGAATGCTGCCCTCTGATCTGTGGGCTCTTAGAGGTGAAGTAGAAATGTGGAATGACTACCCCAGTGTGTATTCGCATATTGTTATACGGTCCATATTGGGCTCAGAGATGGCCGTGGACAACCGTTTGAAGACATGGATCATTGCAAATTCTCCTCGGTATGGTGTTATTATTGATGTTGCTATGAGGGATCACATATTTTTGCTGTTTAGGCTGTGTTTTATGGCAATTTCAAAGGAAGCTATGGGATTTCAAATTGCGCTGGAAAATGGAAATGGAATGGAGGGTGGATCAGGGAACCTCAGTTTTAAGTGTCCGATTTTAGTGCAAGTACTATTGTGGCTGGCATCTCAGCTCTCCGTATTGTATGGGGAGATGAGCGGGAAGTTCTTTGCTATTAACATGCTTAGACAACGTATACTATATGCTGCATCGGGCTTGTCGCTTTTGCCATACGAACAAAAGCGAGTGGAGAGTCCAACTTTGGTAGAGGGCTCTCATAATCTAGTATCTAGTTGTAGCGACACACAGAGTGTGAATTTGAAAAAGTTGGATATGAAGGTTATAAATAATGTCTATGTTACTGGAGAAGAAACGGTCAACTGCAGGGTGATTTTTGTGTCCCAAGTCGCTGCGGCTGTTGCAGCATTGCATGAGCGTTTCCTACTTGAAGAAAAGATCAAAGCTTTACGTTTTTCTCATCTGCAAACTAAACATCAGCTGGTTTCTGAACATAACTATATCTCTCAAAGAGCTTGTGAAGAGCGTAAAAGACGGTGCAGCTATAGACCTATAATTGAGCATGATGGACTCCCAAAGCAGCAGTCTCATGATGAGGATAGAGACAAGACCAAAACAAAAGAGGAATTGTTGGCTGAAGAAAGGGATTATAAACGTCGAAGAATGTCATACCGTGGGAAAAAGGCAAAGCGATCAACTTTACAGGTTACAAGAGATATTATTGAAGAATACATGGACGAAATTATGAAAGCTGGAGGGATTGGATACTTTGTGAAGGGAACTGAAGAGAGAGGGATAAAATCTGAACAACCAACTGATCATTACATTACAAGAGATAGTATTGCTGATGGGCACACAAAAGGAAGCAACAGCTCATATGGAGAAACTAGGCATCATAGCTCAAGTCATTCCCGGAAGCAGTCTAACTATGATAACAGATATTCAGCATCCGAAAAGCCCCCAAAAGGTAGGTGTGGGCACTATGGTTCTCCAGAAGATGAAAGGAAAGGTGTCAGTAAAGACAAATATGATCGAGAACACTATCATAGATTCTCAAATCGAAGCAGTAGTCCTAGCCAGTCACACAAATGGAAGAGATATCCAAGTGATCGAGATGATGAGGAGCCAGCAGAAACCAGGCATCATAAATCTCGAGGACTGTCTTCTAGCAGCTCTAATTATCATGGTTTTAGATCATCTTCATCCTCAAGATCGGGGGGCAATTCTAGTGCAAGGAAGGATGATCATAAATTAAGAGCTAGTGATAGTTGGAAAAGGAACACAGCTGATAATCATAGTTCAGATTCTTTGGTGCTTAATTCATTTAATGATAGATATACCCCTTCCAAGTGTCATGACCAATTGGAAGATGATCACTCCGCTGGCAGAAGATATGTAAATCCAGACGAACTTTAG

Protein sequence

MNPSLPSSNLTFPKFQPSNPNPNFSLPDSREPPLDLSSSLSSLRNLIHVANQTLQSLSYLTLIQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQSLLYPRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVALSNRDEMSKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYSHIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQIALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAASGLSLLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKVINNVYVTGEETVNCRVIFVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPIIEHDGLPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMDEIMKAGGIGYFVKGTEERGIKSEQPTDHYITRDSIADGHTKGSNSSYGETRHHSSSHSRKQSNYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYHRFSNRSSSPSQSHKWKRYPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNSSARKDDHKLRASDSWKRNTADNHSSDSLVLNSFNDRYTPSKCHDQLEDDHSAGRRYVNPDEL

Homology

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BLAST of CmaCh11G009530 vs. Swiss-Prot
Match: U1148_ARATH (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Arabidopsis thaliana GN=SNRNP48 PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 4.9e-113
Identity = 302/759 (39.79%), Postives = 419/759 (55.20%), Query Frame = 1


Query: 2   NPSL------PSSNLTF----PKFQPSNPNPNFSLPDSREPPLDLSSSLSSLRNLIHVAN 61
           NP+L      P+SN  F    P     NPN N+S+  S  P  +LS +LSSL++L+    
Sbjct: 14  NPNLFYHYPPPNSNPNFFFRPPPPPLQNPN-NYSIVPSPPPIRELSGTLSSLKSLLSECQ 73

Query: 62  QTLQSLSY-LTLIQTPSAKPDDSG-FVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPT 121
           +TL SLS  L L  +   + D++G FV+C FD  H +PP +LF HSL CP+     +D  
Sbjct: 74  RTLDSLSQNLALDHSSLLQKDENGCFVRCPFDSNHFMPPEALFLHSLRCPNT----LDLI 133

Query: 122 QLLQSLL-YPRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVA 181
            LL+S   Y  TL+   EL         + + D DLC SL+D +D  SNFFY DCPG V 
Sbjct: 134 HLLESFSSYRNTLELPCEL--------QLNNGDGDLCISLDDLADFGSNFFYRDCPGAVK 193

Query: 182 LSNRDEMSKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWND 241
            S  D   +  TLP VL+VEC++FV  D+  +++    K + +LPSDL A++ E++ W D
Sbjct: 194 FSELDGKKRTLTLPHVLSVECSDFVGSDEKVKKIVLD-KCLGVLPSDLCAMKNEIDQWRD 253

Query: 242 YPSVYSHIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISK 301
           +PS YS  V+ SI+GS++   + L+ WI+ NS RYGVIID  MRDHIFLLFRLC  +  K
Sbjct: 254 FPSSYSSSVLSSIVGSKVVEISALRKWILVNSTRYGVIIDTFMRDHIFLLFRLCLKSAVK 313

Query: 302 EAMGFQI---ALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINML 361
           EA GF++   A + G        + +F+CP+ +QVL WLASQL+VLYGE +GKFFA++M 
Sbjct: 314 EACGFRMESDATDVGEQKIMSCKSSTFECPVFIQVLSWLASQLAVLYGEGNGKFFALDMF 373

Query: 362 RQRILYAASGLSLLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKVINNVY--V 421
           +Q I+ +AS + L   E  R +   +VE          D +  N   +  K   N     
Sbjct: 374 KQCIVESASQVMLFRLEGTRSKCSGVVE-------DLDDARLRNKDVIMEKPFENSSGGE 433

Query: 422 TGEETVNCRVIFVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACE 481
            G+   + +VI VS+V+AAVAAL+ER LLEEKI+A+R++   T++Q  +E  +++ +A E
Sbjct: 434 CGKTLDSPQVISVSRVSAAVAALYERSLLEEKIRAVRYAQPLTRYQRAAELGFMTAKADE 493

Query: 482 ERKRRCSYRPIIEHDGLPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTL 541
           ER RRCSYRPII+HDG P+Q+S ++D DK KT+EELLAEERDYKRRRMSYRGKK KR+  
Sbjct: 494 ERNRRCSYRPIIDHDGRPRQRSLNQDMDKMKTREELLAEERDYKRRRMSYRGKKVKRTPR 553

Query: 542 QVTRDIIEEYMDEIMKAGGIGYFVKG---TEERGIKSEQPTDHYITRDSIADGHTKGSNS 601
           QV  D+IEEY +EI  AGGIG F KG        I ++Q    +       D   KG N 
Sbjct: 554 QVLHDMIEEYTEEIKLAGGIGCFEKGMPLQSRSPIGNDQKESDFGYSIPSTDKQWKGENR 613

Query: 602 SYGETRHHSSSHSRKQSNYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYHRF 661
           +  E    +  +S K   +D   S S +  +    +  S  D R    +D+   +H    
Sbjct: 614 ADIEYPIDNRQNSDKVKRHDEYDSGSSQRQQSHRSYKHS--DRRDDKLRDRRKDKH---- 673

Query: 662 SNRSSSPSQSHKWKRYPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNSSA 721
                            +DR D+E   T+ H   G   S  NY   R  SSS        
Sbjct: 674 -----------------NDRRDDEFTRTKRHSIEG--ESYQNYRSSREKSSS-------- 710

Query: 722 RKDDHKLRASDSWKRNTADNHSSDSLVLNSFNDRYTPSK 740
              D+K +  D + R +    +      N F DRY P++
Sbjct: 734 ---DYKTKRDDPYDRRSQQPRNQ-----NLFEDRYIPTE 710

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BLAST of CmaCh11G009530 vs. TrEMBL
Match: A0A0A0M085_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662780 PE=4 SV=1)

HSP 1 Score: 756.9 bits (1953), Expect = 2.4e-215
Identity = 403/536 (75.19%), Postives = 444/536 (82.84%), Query Frame = 1


Query: 1   MNPSLPSSNL-TFPKFQPSNPNPNFSLPDS-----REPPLDLSSSLSSLRNLIHVANQTL 60
           +NPSLP     TFP F P NPNPN  + DS     + PPLDLSSS SSL NLIH ANQTL
Sbjct: 4   INPSLPFPPYQTFPNFLPPNPNPNSHIHDSSHSQSQHPPLDLSSSFSSLNNLIHFANQTL 63

Query: 61  QSLSYLTLIQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQS 120
           QSLSYLT    PS   + S  + C+FDRRHRVPPHSLF HSLLCPSA    IDPTQL QS
Sbjct: 64  QSLSYLT----PSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLLPIDPTQLFQS 123

Query: 121 LLYPRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVALSNRDE 180
           LLYP+TL SSR+LVNE RF Q +PDSDADLCFSL DYSD +SNFFY+DCPGVVALSN DE
Sbjct: 124 LLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDE 183

Query: 181 MSKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYS 240
           MSKVFTLPRVLAV CANFV +D    EM S+L GIR+LPSDLW LR EVE+WNDYPS YS
Sbjct: 184 MSKVFTLPRVLAVHCANFVGNDHF--EMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYS 243

Query: 241 HIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQ 300
            +V+RSILGSEMA+++ L TWII NSPRYGV+IDVA+RDHIFLLFRLCFMAI KEA+GFQ
Sbjct: 244 FVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQ 303

Query: 301 IALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAAS 360
           +ALE GNGMEG SGN  FKCPIL+QVL+WLASQLSVLYGE +G FFA+NMLRQ IL AAS
Sbjct: 304 VALEKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAAS 363

Query: 361 GLSLLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKVINNVYVTGEETVNCRVI 420
           GL LL  EQK  ES TL EGSH+L  SCSDTQSV + +LD KV+NN +      VNC VI
Sbjct: 364 GLLLLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGH-----AVNCSVI 423

Query: 421 FVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPI 480
            VSQVAAAVAALHERFLLEEKIKALRF+HLQTK+Q VSE+NYISQRACEERKR C+YRPI
Sbjct: 424 LVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRCCNYRPI 483

Query: 481 IEHDGLPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDII 531
           IEHDGLPKQQSH+ED +KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDI+
Sbjct: 484 IEHDGLPKQQSHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIL 528

[Close]

BLAST of CmaCh11G009530 vs. TrEMBL
Match: M5W6C9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001825mg PE=4 SV=1)

HSP 1 Score: 550.8 bits (1418), Expect = 2.6e-153
Identity = 365/763 (47.84%), Postives = 468/763 (61.34%), Query Frame = 1


Query: 3   PSLPSSNLTFPKFQPSNPNPNFSLPDSREPPLDLSSSLSSLRNLIHVANQTLQSLSYLTL 62
           PS P+ N  F   QP N  P  S P    PP DLS+++SSL +L+  + QTL SLS L  
Sbjct: 17  PSNPNPNPNFFHSQPQNTQPVISTPPL--PPPDLSTTISSLDSLVRDSYQTLDSLSALLP 76

Query: 63  IQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQSLLYPRTLQ 122
           +Q P+     S  + C F+  HRV PHSLF HSL CPS P P       L  L YP+TL+
Sbjct: 77  LQNPNYDNPQSSLIPCPFNPHHRVHPHSLFSHSLHCPSHPHP-------LPHLNYPKTLK 136

Query: 123 SSRELVNEKRFRQTMPDSDADLCFSLNDY-SDGSSNFFYLDCPGVVALSNRDEMSKVFTL 182
           SS +   EK F QT+  S+ADL  SL  Y +D  SNFFY DCPGVV  S  D ++++FTL
Sbjct: 137 SSDQSQTEKSFLQTLHGSEADLRLSLEHYYADFGSNFFYSDCPGVVNFSGLDGVNRMFTL 196

Query: 183 PRVLAVECANFVCDDDGDRE-MKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYSHIVIRS 242
           P +L+VECANF+    G+RE M    +  R+LPS+LWA++ EVE WN++P  YS+ V+ +
Sbjct: 197 PLILSVECANFI--GRGEREIMDFEKEWCRILPSELWAIKTEVEGWNEFPFTYSYRVLCA 256

Query: 243 ILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQIALENG 302
           ILG  +  +  + TWIIANSP+YG++IDVAMRDHIFLL RLC  AI +EA+         
Sbjct: 257 ILGLGVVKEYDVGTWIIANSPQYGIVIDVAMRDHIFLLSRLCLKAILREALS-------- 316

Query: 303 NGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAASGLSLLP 362
              EG   +  F+CP LVQ L+WLASQLS+LYG  +GK F IN+L++ +L AA G    P
Sbjct: 317 KVKEGDPESTHFECPTLVQALMWLASQLSILYGAQNGKLFVINVLKKCLLDAALGSLTFP 376

Query: 363 YEQKRVESPTLVEGSHNLVSSCSDTQSVN-LKKLDMKVINNVYVTGEETVNCRVIFVSQV 422
            EQ+  E P L EG  NL ++ S  +    +K L      N  V  +E +  R +FVSQV
Sbjct: 377 LEQQVTEYPALEEGLLNLDANGSGVRDAEVMKPLSTHGGENSMV--KENIFSREVFVSQV 436

Query: 423 AAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPIIEHDG 482
           AAAVAALHERFLLEEK+KA R S   T++Q + +H Y+SQRA EERK R  YRPII+HDG
Sbjct: 437 AAAVAALHERFLLEEKLKAQRVSQTFTRYQRMVDHEYVSQRADEERKNRSQYRPIIDHDG 496

Query: 483 LPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMDEIMK 542
           LP+QQS +++ +K KT+EELLAEERDYKRRRMSYRGKK KR+TLQV RDIIEEYM+EI +
Sbjct: 497 LPRQQSCNQETNKPKTREELLAEERDYKRRRMSYRGKKVKRTTLQVMRDIIEEYMEEIKQ 556

Query: 543 AGGIGYFVKGTEERG-IKSEQPTDHYITRDSIADGHTK------GSNSSYGETRHHSSSH 602
           AGGIG F KGTE  G    E P+   IT D  A+  TK      G + S    R HSS +
Sbjct: 557 AGGIGCFEKGTEGEGSFPFELPSAPEITTD--AEKPTKSNYDSAGCSPSRSRKRSHSSYY 616

Query: 603 S-RKQSNYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYHRFSNRSSSPSQSH 662
           +    ++ D     SEKP +   GH+   ED R   S+D+ D   + R      +P  +H
Sbjct: 617 AIDSVTSRDASAKGSEKPRRSLQGHHHYLEDHRSD-SRDRRDMVKHSRSPESRRNPGWAH 676

Query: 663 KWKRYPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNSSARKDDHKLRASD 722
              R+  +RDD E  +T+H +    SSS S Y   RSSS S SG NS  R+D        
Sbjct: 677 GQTRHHRERDDLEVRKTKHREISRSSSSISKYRDNRSSSHSNSGENSKVRRD-------- 736

Query: 723 SWKRNTADNHSSDSLVLNSFNDRYTPSKCHDQLEDDHSAGRRY 755
              R T +NH+S+S+V N+F DRY P    D  E+D S  R+Y
Sbjct: 737 ---RYTYENHNSNSVVQNTFEDRYDPLISRDIYEEDLSTDRKY 744

[Close]

BLAST of CmaCh11G009530 vs. TrEMBL
Match: W9S254_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006471 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 4.5e-142
Identity = 350/776 (45.10%), Postives = 471/776 (60.70%), Query Frame = 1


Query: 15  FQPSNPNPN-FSL--------PDSREP-PLDLSSSLSSLRNLIHVANQTLQSLSYLTLIQ 74
           F P NPNPN  SL        P +  P PLD S++LSSL  LIH + QTL++L  L  +Q
Sbjct: 15  FLPPNPNPNSVSLNAELQNPQPQNLTPQPLDFSATLSSLNGLIHHSEQTLRALFSLLPLQ 74

Query: 75  TPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQSLLYPRTLQSS 134
            P+ +   +G V C F+ +H + P SLF H L C S+P P      LL  L Y  TL SS
Sbjct: 75  NPN-QAHSNGVVPCPFNSQHLMHPSSLFSHFLHCSSSPCPI--QFDLLPQLNYTETLNSS 134

Query: 135 RELVNEKRFRQTMPDSDADLCFSLND-YSDGSSNFFYLDCPGVVALSNRDEMSKVFTLPR 194
                E+ F QT+  SD++LCFSL+D YS    NFFY DC GVV LS  D +S+ FTLP 
Sbjct: 135 DSSKAERGFLQTLHGSDSELCFSLDDFYSQFGFNFFYNDCHGVVNLSALDGISRTFTLPV 194

Query: 195 VLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYSHIVIRSILG 254
            L+VECANFV +++ +R+     K  ++LPS+LWA+R E+E WN+YP+VYS+ V+ +ILG
Sbjct: 195 FLSVECANFVSNNEEERK-SFERKNRKILPSELWAIRAEIEAWNEYPNVYSYRVLYAILG 254

Query: 255 SEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQIALENGNGM 314
            +      L  W+IANSP+YGV+ID AMRDHIFLL RLC  AI KEA+     + N N +
Sbjct: 255 LDFISVCDLARWVIANSPQYGVVIDTAMRDHIFLLCRLCLKAILKEALNL---VGNCNSV 314

Query: 315 EGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAASGLSLLPYEQ 374
           +    +++F CPILVQ L+WLASQLS+LYGEM+GKFFA+N+L+Q +L AASGL     E+
Sbjct: 315 KI-LNSMNFSCPILVQALMWLASQLSILYGEMNGKFFALNILKQCVLDAASGLVFFSLEK 374

Query: 375 KRVESPTLVEGSHNLVSSCSD--TQSVNLKKLDMKVINNVYVTGEETVNCRVIFVSQVAA 434
              E+P L E   +LV S  +    S   K L+++    V    EE+    VI VSQ+AA
Sbjct: 375 SVTETPALEEVPQSLVDSNGNGIKGSEVQKPLEIRRNGEVNSVVEESFTSGVILVSQLAA 434

Query: 435 AVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPIIEHDGLP 494
           A+AALHER LLE KIK LRF      +Q V+EH+Y+S RA EER++R  YRPIIEHDGLP
Sbjct: 435 AIAALHERSLLEGKIKGLRFHQPLNNYQRVAEHDYVSHRADEEREKRPQYRPIIEHDGLP 494

Query: 495 KQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMDEIMKAG 554
           + +  +E+  KTKT+EELLAE+RDYKRRRMSYR KK KR+ L+V RDIIE++MDEI +AG
Sbjct: 495 RLKVSNEETSKTKTREELLAEDRDYKRRRMSYRAKKVKRTNLEVMRDIIEDFMDEIKQAG 554

Query: 555 GIGYFVKGTEERGIKSEQPTDHYITRDSIADGHTKGSNSSYGETRHHSSS-------HSR 614
           GIG F     E+G K+E   D  + + S A   T   N S  E R++ SS         R
Sbjct: 555 GIGCF-----EKGAKAE---DTLLLKPSYASEITSDINMS--EKRNYDSSAAGDSPDRHR 614

Query: 615 KQSNYDNRYSASEKPPKG---------RCGHYG--SPEDERKGVSKDKYDREHYHRFSNR 674
           KQS +D  Y A     KG         + G YG   P+D+++ +S+DK DRE+Y    +R
Sbjct: 615 KQSGFD--YGARATTFKGYTHKDYEQTKRGLYGDHEPKDDQRSISRDKRDREYY----SR 674

Query: 675 SSSPSQSHKWKRYPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNSSARKD 734
           S    +S  W  +  ++++ E + T+ H+S+  SS  S Y+  R S+   +         
Sbjct: 675 SPRHDRSSDWTHHRREQNEREGSGTKRHESKHSSSRKSKYYVNRLSTFGLT--------S 734

Query: 735 DHKLRASDSWKRNTADNHSSDSLVLNSFNDRYTPSKCHDQLEDDHSAGRRYVNPDE 760
           +HK ++ D    +  +N SS   + N+F DRY PS+ H   EDD     +YV  D+
Sbjct: 735 EHKSKSKDRHHGDRYENRSSALFLRNTFEDRYDPSESHGTYEDDIPTNSKYVWGDK 758

[Close]

BLAST of CmaCh11G009530 vs. TrEMBL
Match: A0A061F1I4_THECC (U11/U12 small nuclear ribonucleoprotein 48 kDa protein, putative isoform 1 OS=Theobroma cacao GN=TCM_026062 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 5.7e-137
Identity = 346/774 (44.70%), Postives = 458/774 (59.17%), Query Frame = 1


Query: 1   MNPSLPSSNLTFPKFQPSNPNPNFSLPD-----SREPPLDLSSSLSSLRNLIHVANQTLQ 60
           + PSLPS N          PNPN ++P      +   P  LS++LSSL  L+ +++QTL 
Sbjct: 6   IQPSLPSQN----------PNPNSTIPSLPQNSNLNGPSSLSTTLSSLTALLSLSHQTLN 65

Query: 61  SLSYLTLIQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQSL 120
           S S LT    P+  P       C F+  H + P SLF HSL CPS     + P     +L
Sbjct: 66  SHSTLTKSLNPNLIP-------CPFNPNHLLAPESLFSHSLRCPSPQNLDLYPPNYRNTL 125

Query: 121 LYPRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDY-SDGSSNFFYLDCPGVVALSNRDE 180
           + P  L +      +  F+       ++LC SL++Y +D  SNFF  DCP  V L + D 
Sbjct: 126 IPPSNLHAQ-----DTHFQGIQC---SELCLSLDEYFADFGSNFFCKDCPAAVNLFDIDN 185

Query: 181 MSKVFTLPRVLAVECANFVCDDDGDRE-MKSSLKGIRMLPSDLWALRGEVEMWNDYPSVY 240
             K FTLP  L+VEC NF  +   +RE + S  KG+R+L S LW +R EVE W DYP  Y
Sbjct: 186 SKKTFTLPGFLSVECVNF--EGFNEREGVVSEEKGLRVLASGLWEIRREVERWGDYPGSY 245

Query: 241 SHIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGF 300
           S  VI +ILGS+M   + L+ WI+ANSPRYGV+ID  M DHI +L RLC  A+ +EA+G 
Sbjct: 246 SFNVICAILGSKMVKGSNLRKWIVANSPRYGVMIDGCMGDHIVVLVRLCLKAVVREAVGL 305

Query: 301 -QIALENGNGMEGG-SGNLS---FKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQR 360
            ++ +  G   E     NL    F+CPIL+QVL+WL SQLSVLYG+++GKFFAINM++Q 
Sbjct: 306 MEVEMGYGEAKEKEWDVNLQMRMFECPILLQVLVWLGSQLSVLYGDVNGKFFAINMIKQC 365

Query: 361 ILYAASGLSLLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKV--INNVYVTGE 420
           +L  AS L L P E+K  +S  L + S +L     D   V   KL+  +   N    T  
Sbjct: 366 VLEGASLLLLFPLEEKVTDSHNLGQESQSL-----DANGVKEIKLEETIEQSNEPVETVN 425

Query: 421 ETVNCRVIFVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERK 480
           ET+   VIFVSQVAAAVAALHER  LEEKIK LR     +++Q ++EH Y+S+RA  ERK
Sbjct: 426 ETIGVGVIFVSQVAAAVAALHERCFLEEKIKHLRGLQQLSRYQRMAEHAYVSERADAERK 485

Query: 481 RRCSYRPIIEHDGLPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVT 540
           +R +YRPII+HDGLP+Q S + +   TKT+EE+LAEERDYKRRRMSYRGKK KR+ LQV 
Sbjct: 486 KRPNYRPIIDHDGLPRQASSNGETSTTKTREEILAEERDYKRRRMSYRGKKLKRTALQVM 545

Query: 541 RDIIEEYMDEIMKAGGIGYFVKGTEERG-IKSEQPTDHYITRDSIADGHTKGSNSSYGET 600
           RDIIEEY +EI KAG IG FVKG EE G + SE P  +   R   AD H KG+ S   E 
Sbjct: 546 RDIIEEYTEEIKKAGRIGCFVKGVEEEGLLPSESPVPY--DRAVDADQHKKGT-SDISEA 605

Query: 601 RHHSSSHSRKQSNYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYHRFSNRSS 660
              S +H R++S+ D    ++      R GH+   ED R  +SK+K+  E++   S R  
Sbjct: 606 ARRSPNHCRRRSHDDQHTRSTRLEDSSRNGHHDLLEDSR-SMSKEKHRDEYHSGISKRYR 665

Query: 661 SPSQSHKWKRYPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSS-SSSRSGGNSSARKDD 720
           S  +S + + +  +RDD E   + H++S G  SS S Y  ++SS S+S S  +   RKDD
Sbjct: 666 SHGRSDEQRSHRRERDDAESTRSTHYES-GRRSSISKYKDYKSSYSASNSSDDFHVRKDD 725

Query: 721 HKLRASDSWKRNTADNHSSDSLVLNSFNDRYTPSKCHDQLEDDHSAGRRYVNPD 759
            KL A D  +R   +NH+  S V N F+DRY PS+  D  EDD     +YV P+
Sbjct: 726 QKLDARDKNRRTLYENHTPGSWVQNGFDDRYNPSESDDMYEDDVFV--KYVRPE 740

[Close]

BLAST of CmaCh11G009530 vs. TrEMBL
Match: B9SHL0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1122770 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 3.6e-131
Identity = 338/764 (44.24%), Postives = 447/764 (58.51%), Query Frame = 1


Query: 1   MNPS-------LPSSNLTFPKFQ----PSNPNPNFSLPDSREPPLDLSSSLSSLRNLIHV 60
           MNPS         +SN   P F     P  P P+        P LDLS++LSSL NL+ +
Sbjct: 1   MNPSSAPYPDYFQNSNYPIPNFVFHSLPQPPPPHIPTITPTTPILDLSTTLSSLANLLSL 60

Query: 61  ANQTLQSLSYLTLIQTPSAKPDDS-GFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDP 120
           + QT  SLS L        KP+ +  F+ C ++  H +PP SLF HSL CPS  P   DP
Sbjct: 61  SQQTRNSLSSLI-------KPNKNVKFISCPYNPNHLMPPESLFLHSLRCPS--PSFQDP 120

Query: 121 TQLLQSLLYPRTLQSSRELVNEKRFRQTMPDSDADLCFSLND-YSDGSSNFFYLDCPGVV 180
             L+ SL YP+TL S     +   F+ +    +A+LC SL+  Y++ SSNFFY DCPG V
Sbjct: 121 ISLVNSLHYPKTLNSQNP--SNPLFKNS---DNAELCLSLDGFYNEFSSNFFYKDCPGAV 180

Query: 181 ALSNRDEMSKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWN 240
             S+ D  SK F LP VL+VECANFV   + D +    +   R+LPSDLW ++ EVE W 
Sbjct: 181 QFSDLDSSSKTFLLPAVLSVECANFVARIEEDIK-GFDINEFRILPSDLWVIKREVESWA 240

Query: 241 DYPSVYSHIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAIS 300
           DYPS+YS+ V  +IL   +   + L+ WII NSPRYGV+IDV MRDHI +LFRLC  AI 
Sbjct: 241 DYPSMYSYAVFCAILRLNVIKGSDLRRWIIFNSPRYGVVIDVYMRDHISVLFRLCLNAIR 300

Query: 301 KEAMGFQIALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQ 360
           +EA  F        G +      SF CP+L QV +W+  QLSVLYGE + K FAI++ RQ
Sbjct: 301 REAFSFM-------GHQMNVKTSSFNCPVLSQVFMWIVPQLSVLYGERNAKCFAIHIFRQ 360

Query: 361 RILYAASGLSLLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKK-LDMKVINNVYVTGE 420
            IL  ++G+ L P E    E  T + G+       SD + + L++ L+  +        E
Sbjct: 361 CILDVSNGM-LFPLEANVKEISTELNGNG------SDVRDIKLQEPLEGSIKCETDAEVE 420

Query: 421 ETVNCRVIFVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERK 480
           E V+  VIFVSQVAA+VAALHER LLE KI+  R S    ++Q + EH+Y+S+RA E+RK
Sbjct: 421 EHVDKEVIFVSQVAASVAALHERALLEAKIQGTRESQSLPRYQRMIEHDYVSKRADEQRK 480

Query: 481 RRCSYRPIIEHDGLPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVT 540
            R +YR II+HDGLP++Q  DED  KTKT+EE+LAEERDYKRRRMSYRGKK KR+TLQVT
Sbjct: 481 ERSNYRAIIDHDGLPRRQPIDEDMSKTKTREEILAEERDYKRRRMSYRGKKLKRTTLQVT 540

Query: 541 RDIIEEYMDEIMKAGGIGYFVKGTEERGIKSEQPTDHYITRDSIADGHTKGSNSSYGETR 600
           RD+IEEYMDEI +AGGIG F KG EE G+ S+ P     T   I  G  + S+S   E  
Sbjct: 541 RDLIEEYMDEIKQAGGIGCFEKGAEEEGMSSKPPFPSDFT---IGGGELRKSSSKSSEAI 600

Query: 601 HHSSSHSRKQSNYDNRYSAS----------EKPPKGRCGHYGSPEDERKGVSKDKYDREH 660
             + +H +KQS+ DN   ++          E+  K    H+   E +RK  S+D++ R++
Sbjct: 601 RATPNHYQKQSHIDNNNRSATCKNASTQDYERWRKVHNRHHEHVEYQRKD-SRDRHGRDY 660

Query: 661 YHRFSNRSSSPSQSHKWKRYPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSS-SSRSG 720
           Y      S+SP + HK      +R+D E   ++ H  R  SS  SNY  ++SS   S S 
Sbjct: 661 Y------SASP-ERHKGHGPLHEREDAEFNISKRHDKR--SSGKSNYQNYKSSCFGSDSA 720

Query: 721 GNSSARKDDHKLRASDSWKRNTADNHSSDSLVLNSFNDRYTPSK 740
            +   +KD  KL   D   RN+   HSS  LV N+F DRY P++
Sbjct: 721 NDPGVQKDGDKLDVRDWHLRNSYGTHSSTFLVKNAFEDRYDPAE 722

[Close]

BLAST of CmaCh11G009530 vs. TAIR10
Match: AT3G04160.2 (AT3G04160.2 unknown protein)

HSP 1 Score: 399.4 bits (1025), Expect = 4.8e-111
Identity = 300/761 (39.42%), Postives = 414/761 (54.40%), Query Frame = 1


Query: 2   NPSL------PSSNLTF----PKFQPSNPNPNFSLPDSREPPLDLSSSLSSLRNLIHVAN 61
           NP+L      P+SN  F    P     NPN N+S+  S  P  +LS +LSSL++L+    
Sbjct: 14  NPNLFYHYPPPNSNPNFFFRPPPPPLQNPN-NYSIVPSPPPIRELSGTLSSLKSLLSECQ 73

Query: 62  QTLQSLSY-LTLIQTPSAKPDDSG-FVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPT 121
           +TL SLS  L L  +   + D++G FV+C FD  H +PP +LF HSL CP+     +D  
Sbjct: 74  RTLDSLSQNLALDHSSLLQKDENGCFVRCPFDSNHFMPPEALFLHSLRCPNT----LDLI 133

Query: 122 QLLQSLL-YPRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVA 181
            LL+S   Y  TL+   EL         + + D DLC SL+D +D  SNFFY DCPG V 
Sbjct: 134 HLLESFSSYRNTLELPCEL--------QLNNGDGDLCISLDDLADFGSNFFYRDCPGAVK 193

Query: 182 LSNRDEMSKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWND 241
            S  D   +  TLP VL+VEC++FV  D+  +++    K + +LPSDL A++ E++ W D
Sbjct: 194 FSELDGKKRTLTLPHVLSVECSDFVGSDEKVKKIVLD-KCLGVLPSDLCAMKNEIDQWRD 253

Query: 242 YPSVYSHIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISK 301
           +PS YS  V+ SI+GS++   + L+ WI+ NS RYGVIID  MRDHIFLLFRLC  +  K
Sbjct: 254 FPSSYSSSVLSSIVGSKVVEISALRKWILVNSTRYGVIIDTFMRDHIFLLFRLCLKSAVK 313

Query: 302 EAMGFQI---ALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINML 361
           EA GF++   A + G        + +F+CP+ +QVL WLASQL+VLYGE +GKFFA++M 
Sbjct: 314 EACGFRMESDATDVGEQKIMSCKSSTFECPVFIQVLSWLASQLAVLYGEGNGKFFALDMF 373

Query: 362 RQRILYAASGLSLLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKVINNVY--V 421
           +Q I+ +AS + L   E  R +   +VE          D +  N   +  K   N     
Sbjct: 374 KQCIVESASQVMLFRLEGTRSKCSGVVE-------DLDDARLRNKDVIMEKPFENSSGGE 433

Query: 422 TGEETVNCRVIFVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSE--HNYISQRA 481
            G+   + +VI VS+V+AAVAAL+ER LLEEKI+A+R++   T++Q +    H  +    
Sbjct: 434 CGKTLDSPQVISVSRVSAAVAALYERSLLEEKIRAVRYAQPLTRYQRIISCLHLSLIPHD 493

Query: 482 CEERKRRCSYRPIIEHDGLPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRS 541
             ER RRCSYRPII+HDG P+Q+S ++D DK KT+EELLAEERDYKRRRMSYRGKK KR+
Sbjct: 494 VSERNRRCSYRPIIDHDGRPRQRSLNQDMDKMKTREELLAEERDYKRRRMSYRGKKVKRT 553

Query: 542 TLQVTRDIIEEYMDEIMKAGGIGYFVKG---TEERGIKSEQPTDHYITRDSIADGHTKGS 601
             QV  D+IEEY +EI  AGGIG F KG        I ++Q    +       D   KG 
Sbjct: 554 PRQVLHDMIEEYTEEIKLAGGIGCFEKGMPLQSRSPIGNDQKESDFGYSIPSTDKQWKGE 613

Query: 602 NSSYGETRHHSSSHSRKQSNYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYH 661
           N +  E    +  +S K   +D   S S +  +    +  S  D R    +D+   +H  
Sbjct: 614 NRADIEYPIDNRQNSDKVKRHDEYDSGSSQRQQSHRSYKHS--DRRDDKLRDRRKDKH-- 673

Query: 662 RFSNRSSSPSQSHKWKRYPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNS 721
                              +DR D+E   T+ H   G   S  NY   R  SSS      
Sbjct: 674 -------------------NDRRDDEFTRTKRHSIEG--ESYQNYRSSREKSSS------ 712

Query: 722 SARKDDHKLRASDSWKRNTADNHSSDSLVLNSFNDRYTPSK 740
                D+K +  D + R +    +      N F DRY P++
Sbjct: 734 -----DYKTKRDDPYDRRSQQPRNQ-----NLFEDRYIPTE 712

[Close]

BLAST of CmaCh11G009530 vs. NCBI nr
Match: gi|659086077|ref|XP_008443753.1| (PREDICTED: uncharacterized protein LOC103487266 [Cucumis melo])

HSP 1 Score: 1043.9 bits (2698), Expect = 1.4e-301
Identity = 563/759 (74.18%), Postives = 630/759 (83.00%), Query Frame = 1


Query: 1   MNPSLP-SSNLTFPKFQPSNPNPNFSLPDS-----REPPLDLSSSLSSLRNLIHVANQTL 60
           +NPSLP   N TFP F P NPNPN  + DS     + P LDL SS SSL  LIH+ANQTL
Sbjct: 4   VNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLANQTL 63

Query: 61  QSLSYLTLIQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQS 120
           +SLSYLT    PS   + S  + C FDRRHRVPPHSLF HSLLCPSA    IDPTQL QS
Sbjct: 64  ESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQLFQS 123

Query: 121 LLYPRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVALSNRDE 180
           LLYP+TL SS +LVNE RF Q +PDSDADLCFSL DY+D +SNFFY DCPGVVALSN DE
Sbjct: 124 LLYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSNLDE 183

Query: 181 MSKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYS 240
           MSKVFTLPRVLAV CANFV +D    EM S+L GIR+LPSDLW LR EVE+WNDYP+ YS
Sbjct: 184 MSKVFTLPRVLAVHCANFVGNDH--LEMNSTLNGIRILPSDLWILRSEVEIWNDYPNKYS 243

Query: 241 HIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQ 300
            +V+RSILGSEM +++ L TWII NSPRYGV+IDVA+RDHIFLLFRLCFMAI KEA+GFQ
Sbjct: 244 FVVLRSILGSEMLLNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQ 303

Query: 301 IALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAAS 360
           +ALE GNGMEGGS N  FKCPIL+QVL+WLASQLSVLYGE +GKFFA+NMLRQ IL AA 
Sbjct: 304 VALEKGNGMEGGSVNSCFKCPILIQVLMWLASQLSVLYGETNGKFFAVNMLRQCILDAAL 363

Query: 361 GLSLLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKVINNVYVTGEETVNCRVI 420
            L LLP EQK  E  TL +G H+L  SCSD QSV + +LD KV+NN  VTG ETVNCRVI
Sbjct: 364 RL-LLPSEQKSTEGLTLGKGCHDLEISCSDIQSVKMNELDQKVVNNGNVTGGETVNCRVI 423

Query: 421 FVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPI 480
            VSQVAAAVAALHERFLLEEKIKALRF+HLQTK+Q VSE+NYISQRACEERKRRC+YRPI
Sbjct: 424 LVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRRCNYRPI 483

Query: 481 IEHDGLPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM 540
           IEHDGLPKQQS++ED +KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM
Sbjct: 484 IEHDGLPKQQSYNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYM 543

Query: 541 DEIMKAGGIGYFVKGTEERGIKSEQPTDHYITRDSIADGHTKGSNSSYGETRHHSSSHSR 600
           +EIMKAGGIG FVKG EERGIKSEQP+DH ITR+ +AD HT+GSN   G+ R HSS HS+
Sbjct: 544 EEIMKAGGIGCFVKGPEERGIKSEQPSDHNITRNIVADVHTRGSNDPCGDAR-HSSGHSK 603

Query: 601 KQSNYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYHRFSNRSSSPSQSHKWK 660
           KQS +D+RY  S+KP KG   HYGSPEDERK   KDKYDR+HYHRFS++SS PSQSHKWK
Sbjct: 604 KQSFHDSRYLVSDKPQKGHYEHYGSPEDERKISHKDKYDRDHYHRFSDQSSIPSQSHKWK 663

Query: 661 RYPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNSSARKDDHKLRASDSWK 720
           RYP+DRDDE PAETRHH+++ L+SSSS  HG RSSSSSRSG  SSARKD HKLRASDSWK
Sbjct: 664 RYPNDRDDEVPAETRHHETKKLASSSS--HG-RSSSSSRSGNGSSARKDSHKLRASDSWK 723

Query: 721 RNTADNHSSDSLVLNSFNDRYTPSKCHDQLEDDHSAGRR 754
           RNTADNHSS+ LV NSF+DRYTPS+CHD+LED++S   R
Sbjct: 724 RNTADNHSSEHLVSNSFSDRYTPSECHDELEDEYSTVSR 751

[Close]

BLAST of CmaCh11G009530 vs. NCBI nr
Match: gi|778664192|ref|XP_004142553.2| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cucumis sativus])

HSP 1 Score: 756.9 bits (1953), Expect = 3.4e-215
Identity = 403/536 (75.19%), Postives = 444/536 (82.84%), Query Frame = 1


Query: 1   MNPSLPSSNL-TFPKFQPSNPNPNFSLPDS-----REPPLDLSSSLSSLRNLIHVANQTL 60
           +NPSLP     TFP F P NPNPN  + DS     + PPLDLSSS SSL NLIH ANQTL
Sbjct: 4   INPSLPFPPYQTFPNFLPPNPNPNSHIHDSSHSQSQHPPLDLSSSFSSLNNLIHFANQTL 63

Query: 61  QSLSYLTLIQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQS 120
           QSLSYLT    PS   + S  + C+FDRRHRVPPHSLF HSLLCPSA    IDPTQL QS
Sbjct: 64  QSLSYLT----PSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLLPIDPTQLFQS 123

Query: 121 LLYPRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVALSNRDE 180
           LLYP+TL SSR+LVNE RF Q +PDSDADLCFSL DYSD +SNFFY+DCPGVVALSN DE
Sbjct: 124 LLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDE 183

Query: 181 MSKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYS 240
           MSKVFTLPRVLAV CANFV +D    EM S+L GIR+LPSDLW LR EVE+WNDYPS YS
Sbjct: 184 MSKVFTLPRVLAVHCANFVGNDHF--EMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYS 243

Query: 241 HIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQ 300
            +V+RSILGSEMA+++ L TWII NSPRYGV+IDVA+RDHIFLLFRLCFMAI KEA+GFQ
Sbjct: 244 FVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQ 303

Query: 301 IALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAAS 360
           +ALE GNGMEG SGN  FKCPIL+QVL+WLASQLSVLYGE +G FFA+NMLRQ IL AAS
Sbjct: 304 VALEKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAAS 363

Query: 361 GLSLLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKVINNVYVTGEETVNCRVI 420
           GL LL  EQK  ES TL EGSH+L  SCSDTQSV + +LD KV+NN +      VNC VI
Sbjct: 364 GLLLLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGH-----AVNCSVI 423

Query: 421 FVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPI 480
            VSQVAAAVAALHERFLLEEKIKALRF+HLQTK+Q VSE+NYISQRACEERKR C+YRPI
Sbjct: 424 LVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRCCNYRPI 483

Query: 481 IEHDGLPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDII 531
           IEHDGLPKQQSH+ED +KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDI+
Sbjct: 484 IEHDGLPKQQSHNEDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIL 528

[Close]

BLAST of CmaCh11G009530 vs. NCBI nr
Match: gi|778664187|ref|XP_011660240.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cucumis sativus])

HSP 1 Score: 752.3 bits (1941), Expect = 8.3e-214
Identity = 403/537 (75.05%), Postives = 444/537 (82.68%), Query Frame = 1


Query: 1   MNPSLPSSNL-TFPKFQPSNPNPNFSLPDS-----REPPLDLSSSLSSLRNLIHVANQTL 60
           +NPSLP     TFP F P NPNPN  + DS     + PPLDLSSS SSL NLIH ANQTL
Sbjct: 4   INPSLPFPPYQTFPNFLPPNPNPNSHIHDSSHSQSQHPPLDLSSSFSSLNNLIHFANQTL 63

Query: 61  QSLSYLTLIQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQS 120
           QSLSYLT    PS   + S  + C+FDRRHRVPPHSLF HSLLCPSA    IDPTQL QS
Sbjct: 64  QSLSYLT----PSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLLPIDPTQLFQS 123

Query: 121 LLYPRTLQSSRELVNEKRFRQTMPDSDADLCFSLNDYSDGSSNFFYLDCPGVVALSNRDE 180
           LLYP+TL SSR+LVNE RF Q +PDSDADLCFSL DYSD +SNFFY+DCPGVVALSN DE
Sbjct: 124 LLYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLDE 183

Query: 181 MSKVFTLPRVLAVECANFVCDDDGDREMKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYS 240
           MSKVFTLPRVLAV CANFV +D    EM S+L GIR+LPSDLW LR EVE+WNDYPS YS
Sbjct: 184 MSKVFTLPRVLAVHCANFVGNDHF--EMNSTLNGIRILPSDLWNLRSEVEIWNDYPSKYS 243

Query: 241 HIVIRSILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQ 300
            +V+RSILGSEMA+++ L TWII NSPRYGV+IDVA+RDHIFLLFRLCFMAI KEA+GFQ
Sbjct: 244 FVVLRSILGSEMALNSHLMTWIIENSPRYGVVIDVALRDHIFLLFRLCFMAIYKEALGFQ 303

Query: 301 IALENGNGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAAS 360
           +ALE GNGMEG SGN  FKCPIL+QVL+WLASQLSVLYGE +G FFA+NMLRQ IL AAS
Sbjct: 304 VALEKGNGMEGESGNSCFKCPILIQVLMWLASQLSVLYGETNGNFFAVNMLRQCILDAAS 363

Query: 361 GLSLLPYEQKRVESPTLVEGSHNLVSSCSDTQSVNLKKLDMKVINNVYVTGEETVNCRVI 420
           GL LL  EQK  ES TL EGSH+L  SCSDTQSV + +LD KV+NN +      VNC VI
Sbjct: 364 GLLLLQSEQKSTESLTLGEGSHDLEISCSDTQSVKMNELDQKVVNNGH-----AVNCSVI 423

Query: 421 FVSQVAAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPI 480
            VSQVAAAVAALHERFLLEEKIKALRF+HLQTK+Q VSE+NYISQRACEERKR C+YRPI
Sbjct: 424 LVSQVAAAVAALHERFLLEEKIKALRFAHLQTKYQRVSEYNYISQRACEERKRCCNYRPI 483

Query: 481 IEHDGLPKQQSHDE-DRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDII 531
           IEHDGLPKQQSH+E D +KTKT+EELLAEERDYKRRRMSYRGKKAKRSTLQVTRDI+
Sbjct: 484 IEHDGLPKQQSHNEQDANKTKTREELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIL 529

[Close]

BLAST of CmaCh11G009530 vs. NCBI nr
Match: gi|645222904|ref|XP_008218377.1| (PREDICTED: uncharacterized protein LOC103318737 [Prunus mume])

HSP 1 Score: 558.1 bits (1437), Expect = 2.3e-155
Identity = 367/767 (47.85%), Postives = 474/767 (61.80%), Query Frame = 1


Query: 3   PSLPSSNLTFPKFQPSNPNPNFSLPDSREPPLDLSSSLSSLRNLIHVANQTLQSLSYLTL 62
           PS P+ N  F   QP N  P  ++P    PP DLS+++SSL +L+  + QTL SLS L  
Sbjct: 17  PSNPNPNPNFFHSQPQNTQP--AIPTPPLPPPDLSTTISSLDSLVRDSYQTLDSLSALLP 76

Query: 63  IQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQSLLYPRTLQ 122
           ++ P+     S  + C F+  HRV PHSLF HSL CPS P P       L  L YP+TL+
Sbjct: 77  LENPNYNNPQSSLIPCPFNPHHRVQPHSLFSHSLHCPSHPHP-------LPHLNYPKTLK 136

Query: 123 SSRELVNEKRFRQTMPDSDADLCFSLNDY-SDGSSNFFYLDCPGVVALSNRDEMSKVFTL 182
           SS +   EK F QT+  S+ADLC SL  Y +D  SNFFY DCPGVV  S  D ++++FTL
Sbjct: 137 SSDQSQIEKSFLQTLHGSEADLCLSLEHYYADFGSNFFYSDCPGVVNFSGLDGVNRMFTL 196

Query: 183 PRVLAVECANFVCDDDGDREMKSSLKG-IRMLPSDLWALRGEVEMWNDYPSVYSHIVIRS 242
           P +L+VECANF+    G+RE+    K   R+LPS+LWA++ EVE WN++P  YS+ V+ +
Sbjct: 197 PLILSVECANFI--GRGEREITDFEKAWCRILPSELWAIKTEVESWNEFPFTYSYRVLCA 256

Query: 243 ILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQIALENG 302
           ILG  +  +  + TWIIANSP+YG++IDVAMRDHIFLL RLC  AI +EA+         
Sbjct: 257 ILGLGVVKEYDVGTWIIANSPQYGIVIDVAMRDHIFLLSRLCLKAILREALS-------- 316

Query: 303 NGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAASGLSLLP 362
              EG   +  F+CP LVQ L+WLASQLS+LYG  +GK F IN+L++ +L AA G    P
Sbjct: 317 KVKEGDPESTHFECPTLVQALMWLASQLSILYGAQNGKLFVINVLKKCLLDAALGSLTFP 376

Query: 363 YEQKRVESPTLVEGSHNLVSSCSDTQSVN-LKKLDMKVINNVYVTGEETVNCRVIFVSQV 422
            EQ+  E P L EGS NL ++ S  +    +K L      N  V  +E +  RV+FVSQV
Sbjct: 377 LEQQVTEYPALEEGSLNLDANGSGVRDAEVMKPLSTDGGGNSMV--KENIISRVVFVSQV 436

Query: 423 AAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPIIEHDG 482
           AAAVAALHERFLLEEK+KA R S   +++Q + +H+Y+SQRA E+RK R  YRPII+HDG
Sbjct: 437 AAAVAALHERFLLEEKLKAQRVSQTFSRYQRMVDHDYVSQRADEKRKNRGQYRPIIDHDG 496

Query: 483 LPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMDEIMK 542
           LP+QQS +++ +KTKT+EELLAEERDYKRRRMSYRGKK KR+TLQV RDIIEEYM+EI +
Sbjct: 497 LPRQQSCNQETNKTKTREELLAEERDYKRRRMSYRGKKVKRTTLQVMRDIIEEYMEEIKQ 556

Query: 543 AGGIGYFVKGTEERG-IKSEQPTDHYITRDSIADGHTKGSNSSYGETRHHSSSHSRKQS- 602
           AGGIG F KGTE  G    E P+   IT D  A+  TK +  S G     S SHSRKQS 
Sbjct: 557 AGGIGCFEKGTEGEGSFPFELPSAPEITTD--AEKPTKSNYDSAG----CSPSHSRKQSH 616

Query: 603 ----------NYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYHRFSNRSSSP 662
                     + D     S+K  +   GH+   ED R   S+D++D   + R      +P
Sbjct: 617 SSYYAIDSATSKDASAKGSKKLRRSLQGHHHYLEDHRSD-SRDRHDMVKHSRSPESRRNP 676

Query: 663 SQSHKWKRYPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNSSARKDDHKL 722
             +H   R+  +RDD E  +T+H +    SSS S Y   RSSS S S  NS  R+D    
Sbjct: 677 GWAHGQIRHHRERDDLEVRKTKHREISWSSSSISKYRDNRSSSQSNSSENSKVRRD---- 736

Query: 723 RASDSWKRNTADNHSSDSLVLNSFNDRYTPSKCHDQLEDDHSAGRRY 755
                  R T +NHSS+S+V N+F DRY P    D  E+D S  R+Y
Sbjct: 737 -------RYTYENHSSNSVVQNTFEDRYDPLISRDIYEEDLSTNRKY 744

[Close]

BLAST of CmaCh11G009530 vs. NCBI nr
Match: gi|595840682|ref|XP_007208065.1| (hypothetical protein PRUPE_ppa001825mg [Prunus persica])

HSP 1 Score: 550.8 bits (1418), Expect = 3.7e-153
Identity = 365/763 (47.84%), Postives = 468/763 (61.34%), Query Frame = 1


Query: 3   PSLPSSNLTFPKFQPSNPNPNFSLPDSREPPLDLSSSLSSLRNLIHVANQTLQSLSYLTL 62
           PS P+ N  F   QP N  P  S P    PP DLS+++SSL +L+  + QTL SLS L  
Sbjct: 17  PSNPNPNPNFFHSQPQNTQPVISTPPL--PPPDLSTTISSLDSLVRDSYQTLDSLSALLP 76

Query: 63  IQTPSAKPDDSGFVQCNFDRRHRVPPHSLFHHSLLCPSAPPPRIDPTQLLQSLLYPRTLQ 122
           +Q P+     S  + C F+  HRV PHSLF HSL CPS P P       L  L YP+TL+
Sbjct: 77  LQNPNYDNPQSSLIPCPFNPHHRVHPHSLFSHSLHCPSHPHP-------LPHLNYPKTLK 136

Query: 123 SSRELVNEKRFRQTMPDSDADLCFSLNDY-SDGSSNFFYLDCPGVVALSNRDEMSKVFTL 182
           SS +   EK F QT+  S+ADL  SL  Y +D  SNFFY DCPGVV  S  D ++++FTL
Sbjct: 137 SSDQSQTEKSFLQTLHGSEADLRLSLEHYYADFGSNFFYSDCPGVVNFSGLDGVNRMFTL 196

Query: 183 PRVLAVECANFVCDDDGDRE-MKSSLKGIRMLPSDLWALRGEVEMWNDYPSVYSHIVIRS 242
           P +L+VECANF+    G+RE M    +  R+LPS+LWA++ EVE WN++P  YS+ V+ +
Sbjct: 197 PLILSVECANFI--GRGEREIMDFEKEWCRILPSELWAIKTEVEGWNEFPFTYSYRVLCA 256

Query: 243 ILGSEMAVDNRLKTWIIANSPRYGVIIDVAMRDHIFLLFRLCFMAISKEAMGFQIALENG 302
           ILG  +  +  + TWIIANSP+YG++IDVAMRDHIFLL RLC  AI +EA+         
Sbjct: 257 ILGLGVVKEYDVGTWIIANSPQYGIVIDVAMRDHIFLLSRLCLKAILREALS-------- 316

Query: 303 NGMEGGSGNLSFKCPILVQVLLWLASQLSVLYGEMSGKFFAINMLRQRILYAASGLSLLP 362
              EG   +  F+CP LVQ L+WLASQLS+LYG  +GK F IN+L++ +L AA G    P
Sbjct: 317 KVKEGDPESTHFECPTLVQALMWLASQLSILYGAQNGKLFVINVLKKCLLDAALGSLTFP 376

Query: 363 YEQKRVESPTLVEGSHNLVSSCSDTQSVN-LKKLDMKVINNVYVTGEETVNCRVIFVSQV 422
            EQ+  E P L EG  NL ++ S  +    +K L      N  V  +E +  R +FVSQV
Sbjct: 377 LEQQVTEYPALEEGLLNLDANGSGVRDAEVMKPLSTHGGENSMV--KENIFSREVFVSQV 436

Query: 423 AAAVAALHERFLLEEKIKALRFSHLQTKHQLVSEHNYISQRACEERKRRCSYRPIIEHDG 482
           AAAVAALHERFLLEEK+KA R S   T++Q + +H Y+SQRA EERK R  YRPII+HDG
Sbjct: 437 AAAVAALHERFLLEEKLKAQRVSQTFTRYQRMVDHEYVSQRADEERKNRSQYRPIIDHDG 496

Query: 483 LPKQQSHDEDRDKTKTKEELLAEERDYKRRRMSYRGKKAKRSTLQVTRDIIEEYMDEIMK 542
           LP+QQS +++ +K KT+EELLAEERDYKRRRMSYRGKK KR+TLQV RDIIEEYM+EI +
Sbjct: 497 LPRQQSCNQETNKPKTREELLAEERDYKRRRMSYRGKKVKRTTLQVMRDIIEEYMEEIKQ 556

Query: 543 AGGIGYFVKGTEERG-IKSEQPTDHYITRDSIADGHTK------GSNSSYGETRHHSSSH 602
           AGGIG F KGTE  G    E P+   IT D  A+  TK      G + S    R HSS +
Sbjct: 557 AGGIGCFEKGTEGEGSFPFELPSAPEITTD--AEKPTKSNYDSAGCSPSRSRKRSHSSYY 616

Query: 603 S-RKQSNYDNRYSASEKPPKGRCGHYGSPEDERKGVSKDKYDREHYHRFSNRSSSPSQSH 662
           +    ++ D     SEKP +   GH+   ED R   S+D+ D   + R      +P  +H
Sbjct: 617 AIDSVTSRDASAKGSEKPRRSLQGHHHYLEDHRSD-SRDRRDMVKHSRSPESRRNPGWAH 676

Query: 663 KWKRYPSDRDDEEPAETRHHKSRGLSSSSSNYHGFRSSSSSRSGGNSSARKDDHKLRASD 722
              R+  +RDD E  +T+H +    SSS S Y   RSSS S SG NS  R+D        
Sbjct: 677 GQTRHHRERDDLEVRKTKHREISRSSSSISKYRDNRSSSHSNSGENSKVRRD-------- 736

Query: 723 SWKRNTADNHSSDSLVLNSFNDRYTPSKCHDQLEDDHSAGRRY 755
              R T +NH+S+S+V N+F DRY P    D  E+D S  R+Y
Sbjct: 737 ---RYTYENHNSNSVVQNTFEDRYDPLISRDIYEEDLSTDRKY 744

The following BLAST results are available for this feature:

BLAST of CmaCh11G009530 vs. Swiss-Prot


Match Name	E-value	Identity	Description
U1148_ARATH	4.9e-113	39.79	U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Arabidopsis thaliana G...	[more]

BLAST of CmaCh11G009530 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M085_CUCSA	2.4e-215	75.19	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662780 PE=4 SV=1	[more]
M5W6C9_PRUPE	2.6e-153	47.84	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001825mg PE=4 SV=1	[more]
W9S254_9ROSA	4.5e-142	45.10	Uncharacterized protein OS=Morus notabilis GN=L484_006471 PE=4 SV=1	[more]
A0A061F1I4_THECC	5.7e-137	44.70	U11/U12 small nuclear ribonucleoprotein 48 kDa protein, putative isoform 1 OS=Th...	[more]
B9SHL0_RICCO	3.6e-131	44.24	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1122770 PE=4 SV=1	[more]

BLAST of CmaCh11G009530 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04160.2	4.8e-111	39.42	unknown protein	[more]

BLAST of CmaCh11G009530 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086077\|ref\|XP_008443753.1\|	1.4e-301	74.18	PREDICTED: uncharacterized protein LOC103487266 [Cucumis melo]	[more]
gi\|778664192\|ref\|XP_004142553.2\|	3.4e-215	75.19	PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cu...	[more]
gi\|778664187\|ref\|XP_011660240.1\|	8.3e-214	75.05	PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cu...	[more]
gi\|645222904\|ref\|XP_008218377.1\|	2.3e-155	47.85	PREDICTED: uncharacterized protein LOC103318737 [Prunus mume]	[more]
gi\|595840682\|ref\|XP_007208065.1\|	3.7e-153	47.84	hypothetical protein PRUPE_ppa001825mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G009530.1	CmaCh11G009530.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21402	UNCHARACTERIZED	coord: 592..737 score: 2.6E-91coord: 17..99 score: 2.6E-91coord: 398..557 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G009530	ClCG03G011330	Watermelon (Charleston Gray)	cmawcgB108
CmaCh11G009530	CmoCh11G009750	Cucurbita moschata (Rifu)	cmacmoB112
CmaCh11G009530	Lsi06G007510	Bottle gourd (USVL1VR-Ls)	cmalsiB128
CmaCh11G009530	Cp4.1LG04g02050	Cucurbita pepo (Zucchini)	cmacpeB147
CmaCh11G009530	MELO3C010119.2	Melon (DHL92) v3.6.1	cmamedB114
CmaCh11G009530	Cla97C03G061780	Watermelon (97103) v2	cmawmbB111
CmaCh11G009530	Bhi02G001081	Wax gourd	cmawgoB0169
CmaCh11G009530	Carg16458	Silver-seed gourd	carcmaB1252

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh11G009530	Cucumber (Gy14) v2	cgybcmaB027
CmaCh11G009530	Cucumber (Chinese Long) v3	cmacucB0099
CmaCh11G009530	Cucurbita maxima (Rimu)	cmacmaB082
CmaCh11G009530	Cucumber (Gy14) v1	cgycmaB1100
CmaCh11G009530	Cucurbita moschata (Rifu)	cmacmoB109
CmaCh11G009530	Wild cucumber (PI 183967)	cmacpiB084
CmaCh11G009530	Cucumber (Chinese Long) v2	cmacuB085
CmaCh11G009530	Melon (DHL92) v3.5.1	cmameB109
CmaCh11G009530	Melon (DHL92) v3.5.1	cmameB107
CmaCh11G009530	Watermelon (97103) v1	cmawmB093