CmaCh11G008820 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAATGCCGCCGCCTCTCCATGTTATGTATCAATTTCCGTCTCCCGCCGCCGCTCCTCCGCCGTCAAACTCGTCTTCTCCGACGGCTTTACTAGACTCCTCCCCGGTAAGCACCACATGGCCGGTGAAATCATGTTCCGATTCCCAAACACGATGATCTGTCACGCCGATTCCTTCTTCATCGGCCACACCCTCCCCTCCTTAGGCACCGACGACAAACTCATCCCCGGCGAGACCTACTTCATTCTCCCGCTCGATCTATTCGCCTCCTTCGACGTTCTCACCACATCGTCGCTCGCAGCCCTCGGCGCTCAAAAGGCGAAGACCGTGAAATTCTCTGGTCCATGTCCGTTTGAGTATGTTCGAAACGCAAACGGGAGAGTTCTGATTAAGGTCGCGCCGGAGTTCATTCTTCGCCTAATTTCCCCGGCGGTGTCGGACGGCAGCGGAGGAGGTCAATTTCTGTGCAGTACGCCGGAGTTGAAGAAACATTACGATCAACTCGTCGGAACGAAGGGACCGGTTTGGGCCCCCAAATTGGAGAGTATTTCGGAGTATAAAATTAGGCATTCACCCTATAAATTTGTAGGGTTTAAACTTAAACAAAAAGAAGGCTAAATAAATACCAAAGGCTAAATAAGTAATTTCATTCCTTTTTTCTTTTTTTTCTTTTTTCCTTTTTTGTCCTTCTGATTTGTACAAAAAGAGAGAGAAAATTTCAATTTTACAATATTAACATTTTTTTTAAAATTTTCTTATTATTTTATTATCAATATCAACCACAAAAGATAATATTAAAAAAAATTTGAAATATTGTCCGCTTTTACCCGTATCGTTGTCGGCTTCGCGGGTTTAAAATGCGCATGTTAGGGAGATGTTTCCACGCTTTTATAAGGTATGCTTTGTTCCCTACTCTAATCGATGTGAGATCTCACAATCCACCCCTTATGATCCTAGAGTCTTCACTGACATACCACTCGGGAATCTAGCTCTGATACCATTTATAACAGCTCGAACTTACCGCTAATAAATATTATCTGCTTTAATCTGTTATGGTTTGTTTATAGACCATTTCAAATAGTTACCAACATGACAGATGAATAGATAAAATCTCTTAAATTACTTAACTCGTAAATAAGCATTAAATTCTACGACCTAACAAACACGACATGTTGGAGTTATCTAAGATAGATTCCATCGACATCTGCAGATTTGAAATGGTAAGTTTGAATAGTATGTTCCTTTTAACTGTACAAGGGTGTTTGTAAATTGGGTCGTGTAGAAGTTGAGAGGTGGATTTTCGTAGTTGACAAAATTAACGATAGGTAGCAATATTGAATATAGGTTCGCTTGACAAGTCGAGTTTGTACAATTTATAATTGAATTTAAAAATTTATTGAAAATATAAAAATTAAAGTTGAGCGTCTGAAAGAACACAACTTGCTTTAACATTTAAAAAATTATTATTTCACAAGTAATAACAGCTAACATCGAATATTTTGAATGGTCCTAACAATTTTAAAAGTAGAAATCAAGTTGGTTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATACATGGACCGACACCATCGTCTCCACCACGTAGGAACTTAGGGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAGAACCTTGTTCAATAAGTAGAACGCATTAGCTGTTATCCGGTTGGGCAGTCAGGGTCGGAGAAGGGCAATCACTCATTCTTACTTAAAACCAGCATTCTTAAGACCAAAGAGGCAGAAAAGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTGTAGAATTGACTTTGACCAAAAAAACTCGAAATTTTCAATTTGAAAAATTCAACTTATCCTAAATCGGAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNTTTTCTTTTTTCCTTTTTTGTCCTTCTGATTTGTACAAAAAGAGAGAGAAAATTTCAATTTTACAATATTAACATTTTTTTTAAAATTTTCTTATTATTTTATTATCAATATCAACCACAAAAGATAATATTAAAAAAAATTTGAAATATTGTCCGCTTTTACCCGTATCGTTGTCGGCTTCGCGGGTTTAAAATGCGCATGTTAGGGAGATGTTTCCACGCTTTTATAAGGTATGCTTTGTTCCCTACTCTAATCGATGTGAGATCTCACAATCCACCCCTTATGATCCTAGAGTCTTCACTGACATACCACTCGGGAATCTAGCTCTGATACCATTTATAACAGCTCGAACTTACCGCTAATAAATATTATCTGCTTTAATCTGTTATGGTTTGTTTATAGACCATTTCAAATAGTTACCAACATGACAGATGAATAGATAAAATCTCTTAAATTACTTAACTCGTAAATAAGCATTAAATTCTACGACCTAACAAACACGACATGTTGGAGTTATCTAAGATAGATTCCATCGACATCTGCAGATTTGAAATGGTAAGTTTGAATAGTATGTTCCTTTTAACTGTACAAGGGTGTTTGTAAATTGGGTCGTGTAGAAGTTGAGAGGTGGATTTTCGTAGTTGACAAAATTAACGATAGGTAGCAATATTGAATATAGGTTCGCTTGACAAGTCGAGTTTGTACAATTTATAATTGAATTTAAAAATTTATTGAAAATATAAAAATTAAAGTTGAGCGTCTGAAAGAACACAACTTGCTTTAACATTTAAAAAATTATTATTTCACAAGTAATAACAGCTAACATCGAATATTTTGAATGGTCCTAACAATTTTAAAAGTAGAAATCAAGTTGGTTTTGAGCGAAATGCGGCAAAAGGAAGGAAAATACATGGACCGACACCATCGTCTCCACCACGTAGGAACTTAGGGATCACCCCAAGGACGCCTTCGGTATCCAGGGGTCGCGGACCGACCATAGAACCTTGTTCAATAAGTAGAACGCATTAGCTGTTATCCGGTTGGGCAGTCAGGGTCGGAGAAGGGCAATCACTCATTCTTACTTAAAACCAGCATTCTTAAGACCAAAGAGGCAGAAAAGGGGGGAAAGCTCTCCGTTCCTGGTTCTCCTGTAGAATTGACTTTGACCAAAAAAACTCGAAATTTTCAATTTGAAAAATTCAACTTATCCTAAATCGGAAAAAAAAAAAAAAAAAAAAAAACCCAATTCAATTCTGATAGTCCAAGTTGTTCCGGTCATCTGAGGATATTTTCTTGCAATTTCATGTACTTAAAATCACTTTCATTTAGATATTGTCTCGGGTAATTCATGTTTCCCTCCTTAACTTGGGCGTCAAAATTTCTTAAAACGGTACAAGTATGAAATAAATAACTTAATAGAAAATCAACTTGTTAACAAAAATATAAGATCACCGTTAGTAGATATTGTTCTTCTTAGATTTTCATTTTCGGGCTTTTCCTCACGGTTTTAAAATGTCTCCGCGCAAGAGAAGTTTCCACATTTTTATAAAGAATACTTCGTTCTCTCCTCCGACCAATATGAGATCTCACAACAATATAATTTTTGTCGCACGCTTATTCTCGTTGACACAATTCAACATCTTCATCTTTAATTTGGGTAGCAACATCATCCACTTGGTGTAATCATATATACTTATTCAAAAATATGACTTAAAATAAATGTAATATCAAGTTGTATAAAATAAAATTTTGACCAACTCAAAAGTCCACGCATTTTGACTTTTGAGAGAAAAATAAGTCTCAATCTTGAATTTATAATTTAAAATGAATTATTTAATATATATTTATGATGGAAAAATTTAATGAGAGTAGTTTTGTTTTGAAATTATCATTTTAAAAAATTAGATGGGAAAAGATAACGAGATCATTATGAGTTGAGTTAGTTAGGTCGAACTGTTTGGTTGTAAATATTTTCAATCCAAATAGTCTTTTATTAAATAATAAATTCAACAATAATTAAAATTTTTAATAAAAGTAAAATGGTAATTCGTAAAATATTTATTTATTTATTTTCAAATGGGTGTATATATATAGTTAGAAGAATAAATAATATAAGTAATTATAAAATTAAATAAAAATATATAAAAATAAAAAAATATATCATCCAGTCTAGTTTTAGGGGAATCCATTAATCAACCCAATTATAAAATTTTTATTTAGTTGAATTCAAATGTCTCAAATAAGTTCATGACCTAATTCAAACCGTACAGGGTAGGTTGAGTTTTTCGGATCATCGAGTTTTATGAACATTCCTACAACTAAATACGGAGACTTAAAAATGTACATTTTGAAAGTACAAGAACAACGAGACTTGAATAGATACGATAATCGTTTTAGACCACAATATAATCCTTCAATATTTGACTTATCCTCTATTTACACAAATCAATGTCGGCCTCCACTTAGTGTTAATACTTGTCAAATTAGATCTCATAATTTATACCTGTAAGAATGTCATTACCATTGACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATACCCGTAAGAATGGTAATATTATTCATTCACGTAAATTTTTTATTTCAATCTTATGTAATTCTAAACATTTTTTTTTTTTAAATTTTAGAAATAAATATAAAATTAAGGGATATTTTTTTATTAATTTAGGGCTTTGGAAAGCAGCTACATTGGATCATTCTCTTGTTGGAAACCAAATTTCATTGATTTTTGGTGTGGCGTTGGATTTTGGAGGCTTTCAAATTAGAGAACAGTGCGAATCACAGGGCAATTCAAGGATACGCAGCAGCCGTTGCCACTTCCCACAGATCATCAGCGCAATTGTGCAGAGACCTTCATAG ATGGGCAATGCCGCCGCCTCTCCATGTTATGTATCAATTTCCGTCTCCCGCCGCCGCTCCTCCGCCGTCAAACTCGTCTTCTCCGACGGCTTTACTAGACTCCTCCCCGGTAAGCACCACATGGCCGGTGAAATCATGTTCCGATTCCCAAACACGATGATCTGTCACGCCGATTCCTTCTTCATCGGCCACACCCTCCCCTCCTTAGGCACCGACGACAAACTCATCCCCGGCGAGACCTACTTCATTCTCCCGCTCGATCTATTCGCCTCCTTCGACGTTCTCACCACATCGTCGCTCGCAGCCCTCGGCGCTCAAAAGGCGAAGACCGTGAAATTCTCTGGTCCATGTCCGTTTGAGTATGTTCGAAACGCAAACGGGAGAGTTCTGATTAAGGTCGCGCCGGAGTTCATTCTTCGCCTAATTTCCCCGGCGGTGTCGGACGGCAGCGGAGGAGGTCAATTTCTGTGCAGTACGCCGGAGTTGAAGAAACATTACGATCAACTCGTCGGAACGAAGGGACCGGTTTGGGCCCCCAAATTGGAGAGGCTTTGGAAAGCAGCTACATTGGATCATTCTCTTGTTGGAAACCAAATTTCATTGATTTTTGGTGTGGCGTTGGATTTTGGAGGCTTTCAAATTAGAGAACAGTGCGAATCACAGGGCAATTCAAGGATACGCAGCAGCCGTTGCCACTTCCCACAGATCATCAGCGCAATTGTGCAGAGACCTTCATAG ATGGGCAATGCCGCCGCCTCTCCATGTTATGTATCAATTTCCGTCTCCCGCCGCCGCTCCTCCGCCGTCAAACTCGTCTTCTCCGACGGCTTTACTAGACTCCTCCCCGGTAAGCACCACATGGCCGGTGAAATCATGTTCCGATTCCCAAACACGATGATCTGTCACGCCGATTCCTTCTTCATCGGCCACACCCTCCCCTCCTTAGGCACCGACGACAAACTCATCCCCGGCGAGACCTACTTCATTCTCCCGCTCGATCTATTCGCCTCCTTCGACGTTCTCACCACATCGTCGCTCGCAGCCCTCGGCGCTCAAAAGGCGAAGACCGTGAAATTCTCTGGTCCATGTCCGTTTGAGTATGTTCGAAACGCAAACGGGAGAGTTCTGATTAAGGTCGCGCCGGAGTTCATTCTTCGCCTAATTTCCCCGGCGGTGTCGGACGGCAGCGGAGGAGGTCAATTTCTGTGCAGTACGCCGGAGTTGAAGAAACATTACGATCAACTCGTCGGAACGAAGGGACCGGTTTGGGCCCCCAAATTGGAGAGGCTTTGGAAAGCAGCTACATTGGATCATTCTCTTGTTGGAAACCAAATTTCATTGATTTTTGGTGTGGCGTTGGATTTTGGAGGCTTTCAAATTAGAGAACAGTGCGAATCACAGGGCAATTCAAGGATACGCAGCAGCCGTTGCCACTTCCCACAGATCATCAGCGCAATTGTGCAGAGACCTTCATAG MGNAAASPCYVSISVSRRRSSAVKLVFSDGFTRLLPGKHHMAGEIMFRFPNTMICHADSFFIGHTLPSLGTDDKLIPGETYFILPLDLFASFDVLTTSSLAALGAQKAKTVKFSGPCPFEYVRNANGRVLIKVAPEFILRLISPAVSDGSGGGQFLCSTPELKKHYDQLVGTKGPVWAPKLERLWKAATLDHSLVGNQISLIFGVALDFGGFQIREQCESQGNSRIRSSRCHFPQIISAIVQRPS
BLAST of CmaCh11G008820 vs. TrEMBL
Match: A0A0A0LZV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G627480 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 6.5e-66 Identity = 131/191 (68.59%), Postives = 149/191 (78.01%), Query Frame = 1
BLAST of CmaCh11G008820 vs. TrEMBL
Match: A0A061GTT2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_040942 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.6e-51 Identity = 108/186 (58.06%), Postives = 137/186 (73.66%), Query Frame = 1
BLAST of CmaCh11G008820 vs. TrEMBL
Match: A0A0D2N954_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G134300 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.2e-50 Identity = 108/185 (58.38%), Postives = 133/185 (71.89%), Query Frame = 1
BLAST of CmaCh11G008820 vs. TrEMBL
Match: D7T157_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g03470 PE=4 SV=1) HSP 1 Score: 207.2 bits (526), Expect = 2.2e-50 Identity = 108/187 (57.75%), Postives = 137/187 (73.26%), Query Frame = 1
BLAST of CmaCh11G008820 vs. TrEMBL
Match: A0A151U210_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_005912 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 1.1e-49 Identity = 102/188 (54.26%), Postives = 135/188 (71.81%), Query Frame = 1
BLAST of CmaCh11G008820 vs. TAIR10
Match: AT5G12340.1 (AT5G12340.1 unknown protein) HSP 1 Score: 157.5 bits (397), Expect = 1.0e-38 Identity = 87/201 (43.28%), Postives = 122/201 (60.70%), Query Frame = 1
BLAST of CmaCh11G008820 vs. TAIR10
Match: AT1G28190.1 (AT1G28190.1 unknown protein) HSP 1 Score: 77.0 bits (188), Expect = 1.8e-14 Identity = 61/189 (32.28%), Postives = 89/189 (47.09%), Query Frame = 1
BLAST of CmaCh11G008820 vs. NCBI nr
Match: gi|659098910|ref|XP_008450347.1| (PREDICTED: uncharacterized protein LOC103491983 [Cucumis melo]) HSP 1 Score: 263.1 bits (671), Expect = 4.9e-67 Identity = 132/191 (69.11%), Postives = 150/191 (78.53%), Query Frame = 1
BLAST of CmaCh11G008820 vs. NCBI nr
Match: gi|449442715|ref|XP_004139126.1| (PREDICTED: uncharacterized protein LOC101216872 [Cucumis sativus]) HSP 1 Score: 258.8 bits (660), Expect = 9.3e-66 Identity = 131/191 (68.59%), Postives = 149/191 (78.01%), Query Frame = 1
BLAST of CmaCh11G008820 vs. NCBI nr
Match: gi|590584873|ref|XP_007015297.1| (Uncharacterized protein TCM_040942 [Theobroma cacao]) HSP 1 Score: 210.3 bits (534), Expect = 3.8e-51 Identity = 108/186 (58.06%), Postives = 137/186 (73.66%), Query Frame = 1
BLAST of CmaCh11G008820 vs. NCBI nr
Match: gi|731393524|ref|XP_010651513.1| (PREDICTED: uncharacterized protein LOC100261894 [Vitis vinifera]) HSP 1 Score: 207.2 bits (526), Expect = 3.2e-50 Identity = 108/187 (57.75%), Postives = 137/187 (73.26%), Query Frame = 1
BLAST of CmaCh11G008820 vs. NCBI nr
Match: gi|823129352|ref|XP_012447741.1| (PREDICTED: uncharacterized protein LOC105770917 [Gossypium raimondii]) HSP 1 Score: 207.2 bits (526), Expect = 3.2e-50 Identity = 108/185 (58.38%), Postives = 133/185 (71.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |