CmaCh11G004850 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh11G004850
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUroporphyrinogen III synthase
LocationCma_Chr11 : 2349791 .. 2350723 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCACCGGCGCCGCCCACCCCAGCCTAATCCACCTAAATCCACTCGCTTCATCTCCTTCTCCCGCCATTCCCACCAACTCCCCTTCGCGTACAGTGGCGTTTACGACGCCTCAGAACTATGCCGGCAGCCTTTCAAACCTCCTCTCTCTCAAAGGCTTCGACCCCCTCTGGTGCCCCACCGTCACCGTCCACCCAACTCCCCTCGCCATCAAATCCCATCTCCTTCCTCCAAATCTCCATTTCTACTCCGCTGTCGCCTTCACCTCCCGCTCTGGCATCACAGCCCTCCTCGACGCTGCTACTGAGATCGACGACCCCTTGCTATCGCCTCAGGGCGACACTTTTCTAATCGCAGCCCTAGGTAAGGACTCGGAGCTTCTCGATCATGGAGTTCTTTCCAAATTTTGCCCTAACACGAGCCGAATTAGAGTCGTCGTACCTAAAATAGCCACGCCGAGTGGTCTAGTGGAGGCTCTTGGGATTGGAAACCACCGTAGGGTTCTGTGTCCGGTTCCTCGCGTCGTGGGGCTGAACGAGCCTCCGGTGGTTCCAAACTTCCTCCGCGACCTCGCGGCGAGCGGGTGGGTTCCGGTTCGTGTCGATGCCTACGAGACCCGGTGGGCCGGACCCGAGTGCGCGAGGATGCTGGTGAAGAGAGGGGAGGATGAGAAATTGGATGCCATTGTGTTTACTAGTACTGGGGAAGTGGAGGGGCTGCTAAAAAGCTTGAGGACTTTGGGATTGAAGTGGGAGATGATGAGAAAAAAGTGGCCGGAAATGGTGTTGGCGGCGCACGGTCCGGTGACGGCGGCGGGAGCTGAGAGGCTCGGCGTTAAGATTGATTTGGTGAGTTCTAAATTCGACAGCTTCAATGGTGTGGTCGATGCTCTTCATTCGAGATGGCAGAGCTTAGAACAGAACCCTGAGTAA

mRNA sequence

ATGAGCACCGGCGCCGCCCACCCCAGCCTAATCCACCTAAATCCACTCGCTTCATCTCCTTCTCCCGCCATTCCCACCAACTCCCCTTCGCGTACAGTGGCGTTTACGACGCCTCAGAACTATGCCGGCAGCCTTTCAAACCTCCTCTCTCTCAAAGGCTTCGACCCCCTCTGGTGCCCCACCGTCACCGTCCACCCAACTCCCCTCGCCATCAAATCCCATCTCCTTCCTCCAAATCTCCATTTCTACTCCGCTGTCGCCTTCACCTCCCGCTCTGGCATCACAGCCCTCCTCGACGCTGCTACTGAGATCGACGACCCCTTGCTATCGCCTCAGGGCGACACTTTTCTAATCGCAGCCCTAGGTAAGGACTCGGAGCTTCTCGATCATGGAGTTCTTTCCAAATTTTGCCCTAACACGAGCCGAATTAGAGTCGTCGTACCTAAAATAGCCACGCCGAGTGGTCTAGTGGAGGCTCTTGGGATTGGAAACCACCGTAGGGTTCTGTGTCCGGTTCCTCGCGTCGTGGGGCTGAACGAGCCTCCGGTGGTTCCAAACTTCCTCCGCGACCTCGCGGCGAGCGGGTGGGTTCCGGTTCGTGTCGATGCCTACGAGACCCGGTGGGCCGGACCCGAGTGCGCGAGGATGCTGGTGAAGAGAGGGGAGGATGAGAAATTGGATGCCATTGTGTTTACTAGTACTGGGGAAGTGGAGGGGCTGCTAAAAAGCTTGAGGACTTTGGGATTGAAGTGGGAGATGATGAGAAAAAAGTGGCCGGAAATGGTGTTGGCGGCGCACGGTCCGGTGACGGCGGCGGGAGCTGAGAGGCTCGGCGTTAAGATTGATTTGGTGAGTTCTAAATTCGACAGCTTCAATGGTGTGGTCGATGCTCTTCATTCGAGATGGCAGAGCTTAGAACAGAACCCTGAGTAA

Coding sequence (CDS)

ATGAGCACCGGCGCCGCCCACCCCAGCCTAATCCACCTAAATCCACTCGCTTCATCTCCTTCTCCCGCCATTCCCACCAACTCCCCTTCGCGTACAGTGGCGTTTACGACGCCTCAGAACTATGCCGGCAGCCTTTCAAACCTCCTCTCTCTCAAAGGCTTCGACCCCCTCTGGTGCCCCACCGTCACCGTCCACCCAACTCCCCTCGCCATCAAATCCCATCTCCTTCCTCCAAATCTCCATTTCTACTCCGCTGTCGCCTTCACCTCCCGCTCTGGCATCACAGCCCTCCTCGACGCTGCTACTGAGATCGACGACCCCTTGCTATCGCCTCAGGGCGACACTTTTCTAATCGCAGCCCTAGGTAAGGACTCGGAGCTTCTCGATCATGGAGTTCTTTCCAAATTTTGCCCTAACACGAGCCGAATTAGAGTCGTCGTACCTAAAATAGCCACGCCGAGTGGTCTAGTGGAGGCTCTTGGGATTGGAAACCACCGTAGGGTTCTGTGTCCGGTTCCTCGCGTCGTGGGGCTGAACGAGCCTCCGGTGGTTCCAAACTTCCTCCGCGACCTCGCGGCGAGCGGGTGGGTTCCGGTTCGTGTCGATGCCTACGAGACCCGGTGGGCCGGACCCGAGTGCGCGAGGATGCTGGTGAAGAGAGGGGAGGATGAGAAATTGGATGCCATTGTGTTTACTAGTACTGGGGAAGTGGAGGGGCTGCTAAAAAGCTTGAGGACTTTGGGATTGAAGTGGGAGATGATGAGAAAAAAGTGGCCGGAAATGGTGTTGGCGGCGCACGGTCCGGTGACGGCGGCGGGAGCTGAGAGGCTCGGCGTTAAGATTGATTTGGTGAGTTCTAAATTCGACAGCTTCAATGGTGTGGTCGATGCTCTTCATTCGAGATGGCAGAGCTTAGAACAGAACCCTGAGTAA

Protein sequence

MSTGAAHPSLIHLNPLASSPSPAIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWCPTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIAALGKDSELLDHGVLSKFCPNTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLNEPPVVPNFLRDLAASGWVPVRVDAYETRWAGPECARMLVKRGEDEKLDAIVFTSTGEVEGLLKSLRTLGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALHSRWQSLEQNPE
Homology
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BLAST of CmaCh11G004850 vs. Swiss-Prot
Match: HEM4_CHLTE (Uroporphyrinogen-III synthase OS=Chlorobium tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS) GN=hemD PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.1e-06
Identity = 60/266 (22.56%), Postives = 110/266 (41.35%), Query Frame = 1 

Query: 31  RTVAFTTPQNYAGSLSNLLSLKGFDPLWCPTVTVHPTPLAIKSHLLPPNLHFYSAVAFTS 90
           +TV  T P++ A      L+  G D +  PT+ + P      +    P+L  ++ + FTS
Sbjct: 2   KTVLVTRPKHQAEPFVRELAQYGLDSVVFPTIEIRPV-----TGWSVPDLTRFAGIFFTS 61

Query: 91  RSGITALLDAATEIDDPLLSPQGDTFLIAALGKDS--ELLDHGVLSKFCPNTSRIRVVVP 150
            + +   L+   E + P   P      + A+GK +  +L  HGV  +           +P
Sbjct: 62  PNSVQFFLERLLE-ESPDELPNLQQARVWAVGKTTGGDLEKHGVSIE----------PLP 121

Query: 151 KIATPSGLVEALGIGN-HRRVLCPVPRVVGLNEPPVVPNFLRDLAASGWVPVRVDAYETR 210
           K A    L+  +       +    V   + L   P V      +A  G + V +  Y+  
Sbjct: 122 KSADAVSLMSGIDASEIEGKTFLFVRGSLSLGTIPEV------IAKRGGICVELTVYDNI 181

Query: 211 WAGPECARMLVKRGEDEKLDAIVFTSTGEVEGLLKSLRTLGLKWEMMRKKWP-EMVLAAH 270
               E  + +     + K+D + FTS        +++ +         K+ P ++++AA 
Sbjct: 182 QPSLEETQKIKSLLTEGKIDCLSFTSPSTAINFFEAIDS---------KEVPSDVLIAAI 236

Query: 271 GPVTAAGAERLGVKIDLVSSKFDSFN 293
           G  T++  E+LGVK+D++   FD  N
Sbjct: 242 GTTTSSALEKLGVKVDIIPEYFDGPN 236

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BLAST of CmaCh11G004850 vs. TrEMBL
Match: A0A0A0LZ08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G266180 PE=4 SV=1)

HSP 1 Score: 516.9 bits (1330), Expect = 1.7e-143
Identity = 255/307 (83.06%), Postives = 278/307 (90.55%), Query Frame = 1 

Query: 1   MSTGAAHPS-LIHLNPLASSPSPAIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWC 60
           MSTGAAHP+   HLN L SSPSPAIPT+   RT AFTTP NYAGSLS+LLSLKGF+PLWC
Sbjct: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIA 120
           PT+TV PTPLAIKSHLLPP LH +SAVAFTSRSGITALLDAATEI +PLL   GDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHGVLSKFCPNTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDH  L+  C NTSRIRVVVP+IATP+GLVEALG+GNHR VLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLAASGWVPVRVDAYETRWAGPECARMLVKRGEDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDL A GWVPVRVDAYETRWAGP+CAR LV+RG+DEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLRTLGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALH 300
           LLKSL  LGL+W++M+++WPEMV+AAHGPVTAAGAERLGVK+DLVSSKFDSFNGVVDALH
Sbjct: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300

Query: 301 SRWQSLE 307
            RWQ+LE
Sbjct: 301 WRWQNLE 307

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BLAST of CmaCh11G004850 vs. TrEMBL
Match: M5W6S0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014878mg PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.5e-96
Identity = 179/282 (63.48%), Postives = 224/282 (79.43%), Query Frame = 1 

Query: 23  AIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWCPTVTVHPTPL---AIKSHLLPP- 82
           ++PT +P  TVAFTTP NYA  L++LL+LKGF+P+  PT+ V PTP    A+K +L PP 
Sbjct: 2   SVPTAAP--TVAFTTPPNYAARLAHLLALKGFNPISSPTLIVQPTPSTISALKPYLSPPP 61

Query: 83  NLHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIAALGKDSELLDHGVLSKFCP 142
           +L  +SA+AF SR+ IT+L  AA +I  PLLSP GD F+IAALGKD+EL+D   + K C 
Sbjct: 62  SLDLFSAIAFPSRTAITSLSAAAADISHPLLSPHGDAFIIAALGKDAELMDDNFVHKLCS 121

Query: 143 NTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLNEPPVVPNFLRDLAASGWVP 202
           NT+R+R++VP  ATPSGLVEALG G +RRVLCPVP VVGL EPPVVP+FLRDL A  WVP
Sbjct: 122 NTNRVRILVPPTATPSGLVEALGDGRNRRVLCPVPVVVGLVEPPVVPDFLRDLEAKRWVP 181

Query: 203 VRVDAYETRWAGPECARMLVKRGEDEKLDAIVFTSTGEVEGLLKSLRTLGLKWEMMRKKW 262
           VRV+AYETRWAGP CA+ +V+R E+  LDA+VFTST EVEGLLKS +  GL WE+ +K+ 
Sbjct: 182 VRVNAYETRWAGPGCAKQVVERIEEGALDAMVFTSTAEVEGLLKSFKEFGLDWEIAKKRC 241

Query: 263 PEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALHS 301
           P+M++AAHGP+TAAGA  LGV++DLVSS+FDSF GVVDALH+
Sbjct: 242 PKMLVAAHGPITAAGAHMLGVRVDLVSSQFDSFQGVVDALHT 281

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BLAST of CmaCh11G004850 vs. TrEMBL
Match: B9IMI7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s12090g PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 9.3e-94
Identity = 176/289 (60.90%), Postives = 215/289 (74.39%), Query Frame = 1 

Query: 24  IPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWCPTVTVHPTPLAIKS---HLLPPNL 83
           I TN P  TVAFTTP NYA  LS+LL+LK F PLWCPT+T  PT   + S   HL P +L
Sbjct: 14  ITTNKP--TVAFTTPPNYATRLSHLLTLKSFTPLWCPTITTEPTQQTLSSLALHLSPHSL 73

Query: 84  HFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIAALGKDSELLDHGVLSKFC-PN 143
              SA+AF SR+ ITA   AA  +  PLL P+ DTF+IAALGKD EL+D   L  FC  +
Sbjct: 74  SLLSAIAFPSRTAITAFSTAALSLTTPLLPPREDTFIIAALGKDVELIDSTFLLTFCGDD 133

Query: 144 TSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLNEPPVVPNFLRDLAASGWVPV 203
            S + V+VP IATPSGLV+ LG G  R+VLCPVPRVVGL EPPVVP+FLR+L  +GWVP+
Sbjct: 134 ISWVNVLVPTIATPSGLVQLLGTGRGRKVLCPVPRVVGLEEPPVVPDFLRELEGAGWVPI 193

Query: 204 RVDAYETRWAGPECARMLVKRGEDEKLDAIVFTSTGEVEGLLKSLRTLGLKWEMMRKKWP 263
           RVDAYETRW GP C + +V+  E   LDA+VFTS+GEVEGLLKSLR  G  WEM+R++WP
Sbjct: 194 RVDAYETRWLGPACGKGVVELSEGGLLDAMVFTSSGEVEGLLKSLREFGWDWEMVRRRWP 253

Query: 264 EMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALHSRWQSLEQN 309
            +V+AAHGPVTAAGAERLGV +D+VS +FDSF GVVDA+ ++ + L+ +
Sbjct: 254 HLVVAAHGPVTAAGAERLGVTVDVVSGRFDSFQGVVDAVEAKLRGLDSS 300

[Close]
BLAST of CmaCh11G004850 vs. TrEMBL
Match: M1AK16_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401009429 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.8e-92
Identity = 183/304 (60.20%), Postives = 215/304 (70.72%), Query Frame = 1 

Query: 15  PLASSPSPAIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWCPTVTVHPTPLAIKS- 74
           PL  SP P+   +  +  +AFTTPQNYA  LS L+ LKG+ PLWCPTV V  T   I S 
Sbjct: 5   PLFPSPVPSPENSRRNCVIAFTTPQNYAPRLSELIHLKGWTPLWCPTVIVESTEQTISSI 64

Query: 75  -HLLPPN---------LHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIAALGK 134
            H L P          L  +SA+AFTSR+GITA   A +    P L+P G+   IAALG 
Sbjct: 65  HHYLNPQAGIDEPNSFLEEFSALAFTSRTGITAFSQALSINPTPPLTPNGEILTIAALGN 124

Query: 135 DSELLDHGVLSKFCPNTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLNEPPV 194
           D+ELLD   + K C N  RIRV+VP IATPSGLVEALG+G  R+VLCPVP V+GLNEPPV
Sbjct: 125 DAELLDREFIRKMCENPERIRVLVPSIATPSGLVEALGLGQGRKVLCPVPLVIGLNEPPV 184

Query: 195 VPNFLRDLAASGWVPVRVDAYETRWAGPECARMLVKRGEDE-KLDAIVFTSTGEVEGLLK 254
           VP FL DL+  GW+PVR+DAYETRWAG +CA  +V + E+E   DAIVFTSTGEVEGLLK
Sbjct: 185 VPKFLEDLSKRGWIPVRLDAYETRWAGAKCAVDVVTKSEEECGFDAIVFTSTGEVEGLLK 244

Query: 255 SLRTLGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALHSRW 307
           SL   GL W M+R++ P MV+AAHGPVTAAGAE LGV ID+VSS F SFNGVVDAL  +W
Sbjct: 245 SLEEFGLDWSMVRRRCPRMVVAAHGPVTAAGAESLGVGIDVVSSNFGSFNGVVDALAHKW 304

[Close]
BLAST of CmaCh11G004850 vs. TrEMBL
Match: A0A061GKG3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_037120 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 2.3e-92
Identity = 173/301 (57.48%), Postives = 219/301 (72.76%), Query Frame = 1 

Query: 12  HLNPLASSPSPAIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWCPTVTVHPTPLAI 71
           +L PL+SS      T  P  TV FTTP NYA  LSNLL+LKG  PLWCPT+T HPTP ++
Sbjct: 7   NLTPLSSS------TVKP--TVIFTTPPNYAARLSNLLTLKGHTPLWCPTITTHPTPHSL 66

Query: 72  KSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIAALGKDSELLDHG 131
            +HL P +L   SA+ F SR+ IT+   AA  +  PLL   G TF++AALGKDSEL++  
Sbjct: 67  STHLSPHSLSLLSAITFPSRASITSFSLAALSLPKPLLPSHGPTFILAALGKDSELINTP 126

Query: 132 VLSKFCPNTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLNEPPVVPNFLRDL 191
            +S+ C N  RI+V+VP  ATP+ L  +LG G  RRVLCPVP+VVGLNEPPVVP+FL+DL
Sbjct: 127 FISQICSNLQRIKVLVPPTATPNSLALSLGKGYGRRVLCPVPKVVGLNEPPVVPDFLKDL 186

Query: 192 AASGWVPVRVDAYETRWAGPECARMLVKRGE--DEKLDAIVFTSTGEVEGLLKSLRTLGL 251
            + GWVP+RVDAYETRW GP CA  +V++GE  +E+++A+VFTS+GEVEG LKSLR  G 
Sbjct: 187 ESGGWVPIRVDAYETRWVGPSCAEEVVRKGEEHEEEVNAVVFTSSGEVEGFLKSLREFGW 246

Query: 252 KWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALHSRWQSLEQNP 311
            W M+R++W  +V+AAHGPVTA GA+RLGV +D+VSS FDSF GVVDAL     +L Q  
Sbjct: 247 DWGMVRRRWSRLVVAAHGPVTAVGAKRLGVDVDVVSSNFDSFQGVVDALDVCLNALGQEQ 299

[Close]
BLAST of CmaCh11G004850 vs. NCBI nr
Match: gi|659086637|ref|XP_008444040.1| (PREDICTED: uncharacterized protein LOC103487492 [Cucumis melo])

HSP 1 Score: 529.3 bits (1362), Expect = 4.7e-147
Identity = 259/307 (84.36%), Postives = 283/307 (92.18%), Query Frame = 1 

Query: 1   MSTGAAHPS-LIHLNPLASSPSPAIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWC 60
           MSTGAAHP+   H++PL SSPSPAIPT+S  RTVAFTTPQNYAGSLS+LLSLKGF+PLWC
Sbjct: 1   MSTGAAHPNGPFHISPLTSSPSPAIPTHSSPRTVAFTTPQNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIA 120
           PT+TV PTPLAIKSHLLPP LH +SAVAFTSRSGITALLDAATEI +PLL   GDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHGVLSKFCPNTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDH  L+  CPNTSRIRVVVP+IATP+GLVEALG+GNHRRVLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICPNTSRIRVVVPEIATPTGLVEALGVGNHRRVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLAASGWVPVRVDAYETRWAGPECARMLVKRGEDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDL A GWVPVRVDAYETRWAGP+CAR LV+RG+DEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLRTLGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALH 300
           LLKSL  LGL+W+MM+K+WPEMV+AAHGPVTAAGAERLGVK+DLVS KFDSFNGVVD+LH
Sbjct: 241 LLKSLEHLGLEWDMMKKRWPEMVVAAHGPVTAAGAERLGVKVDLVSPKFDSFNGVVDSLH 300

Query: 301 SRWQSLE 307
            RWQSL+
Sbjct: 301 WRWQSLD 307

[Close]
BLAST of CmaCh11G004850 vs. NCBI nr
Match: gi|778665058|ref|XP_011648476.1| (PREDICTED: uncharacterized protein LOC105434481 [Cucumis sativus])

HSP 1 Score: 516.9 bits (1330), Expect = 2.4e-143
Identity = 255/307 (83.06%), Postives = 278/307 (90.55%), Query Frame = 1 

Query: 1   MSTGAAHPS-LIHLNPLASSPSPAIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWC 60
           MSTGAAHP+   HLN L SSPSPAIPT+   RT AFTTP NYAGSLS+LLSLKGF+PLWC
Sbjct: 1   MSTGAAHPNGPFHLNSLTSSPSPAIPTHFSPRTAAFTTPPNYAGSLSHLLSLKGFEPLWC 60

Query: 61  PTVTVHPTPLAIKSHLLPPNLHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIA 120
           PT+TV PTPLAIKSHLLPP LH +SAVAFTSRSGITALLDAATEI +PLL   GDTFLIA
Sbjct: 61  PTLTVQPTPLAIKSHLLPPILHSFSAVAFTSRSGITALLDAATEIGEPLLPSHGDTFLIA 120

Query: 121 ALGKDSELLDHGVLSKFCPNTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLN 180
           ALGKDSELLDH  L+  C NTSRIRVVVP+IATP+GLVEALG+GNHR VLCPVPRVVGLN
Sbjct: 121 ALGKDSELLDHEFLTTICHNTSRIRVVVPEIATPTGLVEALGVGNHRSVLCPVPRVVGLN 180

Query: 181 EPPVVPNFLRDLAASGWVPVRVDAYETRWAGPECARMLVKRGEDEKLDAIVFTSTGEVEG 240
           EPPVVPNFLRDL A GWVPVRVDAYETRWAGP+CAR LV+RG+DEKLDAIVFTSTGEVEG
Sbjct: 181 EPPVVPNFLRDLEAKGWVPVRVDAYETRWAGPDCARKLVERGKDEKLDAIVFTSTGEVEG 240

Query: 241 LLKSLRTLGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALH 300
           LLKSL  LGL+W++M+++WPEMV+AAHGPVTAAGAERLGVK+DLVSSKFDSFNGVVDALH
Sbjct: 241 LLKSLAHLGLEWDVMKRRWPEMVVAAHGPVTAAGAERLGVKVDLVSSKFDSFNGVVDALH 300

Query: 301 SRWQSLE 307
            RWQ+LE
Sbjct: 301 WRWQNLE 307

[Close]
BLAST of CmaCh11G004850 vs. NCBI nr
Match: gi|595814521|ref|XP_007203754.1| (hypothetical protein PRUPE_ppa014878mg [Prunus persica])

HSP 1 Score: 359.4 bits (921), Expect = 6.4e-96
Identity = 179/282 (63.48%), Postives = 224/282 (79.43%), Query Frame = 1 

Query: 23  AIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWCPTVTVHPTPL---AIKSHLLPP- 82
           ++PT +P  TVAFTTP NYA  L++LL+LKGF+P+  PT+ V PTP    A+K +L PP 
Sbjct: 2   SVPTAAP--TVAFTTPPNYAARLAHLLALKGFNPISSPTLIVQPTPSTISALKPYLSPPP 61

Query: 83  NLHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIAALGKDSELLDHGVLSKFCP 142
           +L  +SA+AF SR+ IT+L  AA +I  PLLSP GD F+IAALGKD+EL+D   + K C 
Sbjct: 62  SLDLFSAIAFPSRTAITSLSAAAADISHPLLSPHGDAFIIAALGKDAELMDDNFVHKLCS 121

Query: 143 NTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLNEPPVVPNFLRDLAASGWVP 202
           NT+R+R++VP  ATPSGLVEALG G +RRVLCPVP VVGL EPPVVP+FLRDL A  WVP
Sbjct: 122 NTNRVRILVPPTATPSGLVEALGDGRNRRVLCPVPVVVGLVEPPVVPDFLRDLEAKRWVP 181

Query: 203 VRVDAYETRWAGPECARMLVKRGEDEKLDAIVFTSTGEVEGLLKSLRTLGLKWEMMRKKW 262
           VRV+AYETRWAGP CA+ +V+R E+  LDA+VFTST EVEGLLKS +  GL WE+ +K+ 
Sbjct: 182 VRVNAYETRWAGPGCAKQVVERIEEGALDAMVFTSTAEVEGLLKSFKEFGLDWEIAKKRC 241

Query: 263 PEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALHS 301
           P+M++AAHGP+TAAGA  LGV++DLVSS+FDSF GVVDALH+
Sbjct: 242 PKMLVAAHGPITAAGAHMLGVRVDLVSSQFDSFQGVVDALHT 281

[Close]
BLAST of CmaCh11G004850 vs. NCBI nr
Match: gi|743808264|ref|XP_011018215.1| (PREDICTED: uncharacterized protein LOC105121321 [Populus euphratica])

HSP 1 Score: 355.9 bits (912), Expect = 7.1e-95
Identity = 176/289 (60.90%), Postives = 218/289 (75.43%), Query Frame = 1 

Query: 24  IPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWCPTVTVHPTPLAIKS---HLLPPNL 83
           I +N P  TVAFTTP NYA  LS+LL+LK F PLWCPT+T  PT   + S   HL P +L
Sbjct: 16  ITSNKP--TVAFTTPPNYATRLSHLLTLKSFTPLWCPTITTEPTQQTLSSLALHLSPQSL 75

Query: 84  HFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIAALGKDSELLDHGVLSKFC-PN 143
              SA+AF SR+ ITA   AA  +  PLL P+ DTF+IA LGKD+EL+D   L  FC  +
Sbjct: 76  SLLSAIAFPSRTAITAFSTAALSLTTPLLPPREDTFIIATLGKDAELIDSTFLLNFCGDD 135

Query: 144 TSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLNEPPVVPNFLRDLAASGWVPV 203
            SR+ V+VP IATPSGLV+ LG G  R+VLCPVPRVVGL EPPVVP+FLR+L A+GWVP+
Sbjct: 136 ISRVNVLVPTIATPSGLVQLLGTGRGRKVLCPVPRVVGLEEPPVVPDFLRELEAAGWVPI 195

Query: 204 RVDAYETRWAGPECARMLVKRGEDEKLDAIVFTSTGEVEGLLKSLRTLGLKWEMMRKKWP 263
           RVDAYETRW GP C + +V+  E   LDA+VFTS+GEVEGLLKSLR  G  WEM+R++WP
Sbjct: 196 RVDAYETRWLGPTCGKGVVELSEGGLLDAMVFTSSGEVEGLLKSLREFGWDWEMVRRRWP 255

Query: 264 EMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALHSRWQSLEQN 309
           ++V+AAHGPVTAAGAERLGV +D+VS +FDSF GVVDA+ ++ + L+ +
Sbjct: 256 QLVVAAHGPVTAAGAERLGVTVDVVSGRFDSFQGVVDAVEAKLRGLDSS 302

[Close]
BLAST of CmaCh11G004850 vs. NCBI nr
Match: gi|747099876|ref|XP_011098004.1| (PREDICTED: uncharacterized protein LOC105176792 [Sesamum indicum])

HSP 1 Score: 354.0 bits (907), Expect = 2.7e-94
Identity = 182/300 (60.67%), Postives = 216/300 (72.00%), Query Frame = 1 

Query: 12  HLNPLASSPSPAIPTNSPSRTVAFTTPQNYAGSLSNLLSLKGFDPLWCPTVTVHPTPL-- 71
           H  P+ SSP+         R +AFTTPQNYAG LS+ + LKG+ PLWCPT+ V PTP   
Sbjct: 8   HYPPVPSSPAATF------RLIAFTTPQNYAGRLSHFIRLKGWGPLWCPTLAVEPTPQTI 67

Query: 72  -AIKSHLLPPN--LHFYSAVAFTSRSGITALLDAATEIDDPLLSPQGDTFLIAALGKDSE 131
            A++   L PN  LH++SAVAFTSR+GI A  +A   ID P L P G+TF++AALGKDSE
Sbjct: 68  SAVQHFFLTPNPPLHYFSAVAFTSRTGIAAFAEALAGIDKPPLGPDGETFVVAALGKDSE 127

Query: 132 LLDHGVLSKFCPNTSRIRVVVPKIATPSGLVEALGIGNHRRVLCPVPRVVGLNEPPVVPN 191
           LL    + K C N  RIRVVVP +ATPSGLVE+LG+G  R+VLCP P V+GL EPPVVP 
Sbjct: 128 LLGESFIPKLCKNPGRIRVVVPPVATPSGLVESLGMGRGRKVLCPAPLVIGLEEPPVVPK 187

Query: 192 FLRDLAASGWVPVRVDAYETRWAGPECARMLVKRGEDEKLDAIVFTSTGEVEGLLKSLRT 251
           FL DL   GWVPVRV+AYETRW     A ++    E+  +DAIVFTST EVEGLLKSL  
Sbjct: 188 FLADLGRKGWVPVRVNAYETRWRS-GVAELVEMMEEECGVDAIVFTSTAEVEGLLKSLGE 247

Query: 252 LGLKWEMMRKKWPEMVLAAHGPVTAAGAERLGVKIDLVSSKFDSFNGVVDALHSRWQSLE 307
           +GL WEM+R+  P MV AAHGPVTAAGAE+LGV ID+VSS+FDSF GVVDAL  RW+S E
Sbjct: 248 VGLDWEMVRRMCPRMVAAAHGPVTAAGAEKLGVGIDVVSSRFDSFEGVVDALEYRWKSYE 300

The following BLAST results are available for this feature:
BLAST of CmaCh11G004850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
HEM4_CHLTE6.1e-0622.56Uroporphyrinogen-III synthase OS=Chlorobium tepidum (strain ATCC 49652 / DSM 120... [more]
BLAST of CmaCh11G004850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LZ08_CUCSA1.7e-14383.06Uncharacterized protein OS=Cucumis sativus GN=Csa_1G266180 PE=4 SV=1[more]
M5W6S0_PRUPE4.5e-9663.48Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014878mg PE=4 SV=1[more]
B9IMI7_POPTR9.3e-9460.90Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s12090g PE=4 SV=1[more]
M1AK16_SOLTU1.8e-9260.20Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG401009429 PE=4 SV=1[more]
A0A061GKG3_THECC2.3e-9257.48Uncharacterized protein OS=Theobroma cacao GN=TCM_037120 PE=4 SV=1[more]
BLAST of CmaCh11G004850 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh11G004850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659086637|ref|XP_008444040.1|4.7e-14784.36PREDICTED: uncharacterized protein LOC103487492 [Cucumis melo][more]
gi|778665058|ref|XP_011648476.1|2.4e-14383.06PREDICTED: uncharacterized protein LOC105434481 [Cucumis sativus][more]
gi|595814521|ref|XP_007203754.1|6.4e-9663.48hypothetical protein PRUPE_ppa014878mg [Prunus persica][more]
gi|743808264|ref|XP_011018215.1|7.1e-9560.90PREDICTED: uncharacterized protein LOC105121321 [Populus euphratica][more]
gi|747099876|ref|XP_011098004.1|2.7e-9460.67PREDICTED: uncharacterized protein LOC105176792 [Sesamum indicum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR0037544pyrrol_synth_uPrphyn_synth
Vocabulary: Molecular Function
TermDefinition
GO:0004852uroporphyrinogen-III synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0006783 heme biosynthetic process
biological_process GO:0033014 tetrapyrrole biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004852 uroporphyrinogen-III synthase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G004850.1CmaCh11G004850.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003754Tetrapyrrole biosynthesis, uroporphyrinogen III synthasePFAMPF02602HEM4coord: 44..292
score: 4.7
IPR003754Tetrapyrrole biosynthesis, uroporphyrinogen III synthaseunknownSSF69618HemD-likecoord: 31..302
score: 6.54
NoneNo IPR availableGENE3DG3DSA:3.40.50.10090coord: 186..300
score: 2.5E-15coord: 31..150
score: 4.
NoneNo IPR availablePANTHERPTHR38020FAMILY NOT NAMEDcoord: 13..310
score: 2.5
NoneNo IPR availablePANTHERPTHR38020:SF1SUBFAMILY NOT NAMEDcoord: 13..310
score: 2.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh11G004850Cla018703Watermelon (97103) v1cmawmB143
CmaCh11G004850Csa1G266180Cucumber (Chinese Long) v2cmacuB100
CmaCh11G004850MELO3C010256Melon (DHL92) v3.5.1cmameB105
CmaCh11G004850ClCG06G012090Watermelon (Charleston Gray)cmawcgB135
CmaCh11G004850CmoCh11G004870Cucurbita moschata (Rifu)cmacmoB112
CmaCh11G004850Lsi06G010470Bottle gourd (USVL1VR-Ls)cmalsiB132
CmaCh11G004850Cp4.1LG04g08850Cucurbita pepo (Zucchini)cmacpeB153
CmaCh11G004850MELO3C010256.2Melon (DHL92) v3.6.1cmamedB112
CmaCh11G004850CsaV3_1G028580Cucumber (Chinese Long) v3cmacucB0111
CmaCh11G004850Cla97C06G121280Watermelon (97103) v2cmawmbB139
CmaCh11G004850Bhi02G000723Wax gourdcmawgoB0150
CmaCh11G004850CsGy1G017520Cucumber (Gy14) v2cgybcmaB039
CmaCh11G004850Carg14106Silver-seed gourdcarcmaB0710
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh11G004850Cucumber (Gy14) v1cgycmaB0361
CmaCh11G004850Cucumber (Gy14) v1cgycmaB0753
CmaCh11G004850Cucumber (Gy14) v1cgycmaB0958
CmaCh11G004850Cucurbita moschata (Rifu)cmacmoB097
CmaCh11G004850Cucurbita moschata (Rifu)cmacmoB099
CmaCh11G004850Cucurbita moschata (Rifu)cmacmoB123
CmaCh11G004850Cucurbita moschata (Rifu)cmacmoB141
CmaCh11G004850Wild cucumber (PI 183967)cmacpiB097
CmaCh11G004850Wild cucumber (PI 183967)cmacpiB113
CmaCh11G004850Wild cucumber (PI 183967)cmacpiB131
CmaCh11G004850Cucumber (Chinese Long) v2cmacuB134
CmaCh11G004850Cucumber (Chinese Long) v2cmacuB115
CmaCh11G004850Melon (DHL92) v3.5.1cmameB135
CmaCh11G004850Melon (DHL92) v3.5.1cmameB143
CmaCh11G004850Watermelon (Charleston Gray)cmawcgB121
CmaCh11G004850Watermelon (97103) v1cmawmB108
CmaCh11G004850Cucurbita pepo (Zucchini)cmacpeB132
CmaCh11G004850Cucurbita pepo (Zucchini)cmacpeB143
CmaCh11G004850Bottle gourd (USVL1VR-Ls)cmalsiB094
CmaCh11G004850Bottle gourd (USVL1VR-Ls)cmalsiB120
CmaCh11G004850Bottle gourd (USVL1VR-Ls)cmalsiB147
CmaCh11G004850Cucumber (Gy14) v2cgybcmaB160
CmaCh11G004850Cucumber (Gy14) v2cgybcmaB477
CmaCh11G004850Melon (DHL92) v3.6.1cmamedB146
CmaCh11G004850Melon (DHL92) v3.6.1cmamedB155
CmaCh11G004850Silver-seed gourdcarcmaB0169
CmaCh11G004850Silver-seed gourdcarcmaB0354
CmaCh11G004850Silver-seed gourdcarcmaB0891
CmaCh11G004850Cucumber (Chinese Long) v3cmacucB0130
CmaCh11G004850Cucumber (Chinese Long) v3cmacucB0152
CmaCh11G004850Watermelon (97103) v2cmawmbB124
CmaCh11G004850Wax gourdcmawgoB0148
CmaCh11G004850Cucurbita maxima (Rimu)cmacmaB031
CmaCh11G004850Cucurbita maxima (Rimu)cmacmaB072
CmaCh11G004850Cucurbita maxima (Rimu)cmacmaB124
CmaCh11G004850Cucurbita maxima (Rimu)cmacmaB145
CmaCh11G004850Cucurbita maxima (Rimu)cmacmaB170