CmaCh11G001110 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh11G001110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	DUF4228 domain protein
Location	Cma_Chr11 : 600134 .. 603062 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTACCTCTCTATCTCTAGTGGCTATAAAAAAAGATTGGTCCTCTTTCCTTGGCCTCCCCTTTTGTTTGTTCATTATCCTCTTCTCCCACAGTTTCATTCCCAGCAGAGAGAGAGAGAGAGAGATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGTTGACAAACTATATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAATCCTGGTCATTATGTTGCTCTTCTTATCTCCACCACCATGGTTACACCGAATGAAAGTTCTAATAACAATGAAACCAGCAAGGTTGAGAAAAAGGAGAATGAAGCCAGAAAGGTTGAGAAAAAGGAGAATGAAGCCAGAAAGGTTGAGAAAAAGGAGAATGAAGGCAGTAGTAATTCGGTTCGTTTAACTAGAATCAAGCTTCTTCGCCCAGCTGACACGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTAAAGGTGAGTTTTATATCTACCACCGTTCTTCCTCTTGTTGCTGTCTGTTTTTCATATCCAACCCATAAAATTCTTCAAATCTCTTAATTTTTTAGTCTGAATTTGAATTAATGGCTTCATTTTCTTTGTGGGTTTCAGAGGTTATGAGTGGTTTATCCGCAAAGAAACAAGCAAAGGTTAAACAAAGCCAGTTAGAAGCCGCTGAGAAGGCAGGGAGGAGGAAAGAACGTGCAGCCAGAGGCTCAGATTCAGCAGCCACCGCCGCAGCTGGAAGATCTGTATCTGAAGATCCTTTTCAGGTGAATTTTTTAACAAACATCAAAACAATTCTCAACTTTGAAGGGAGTTCTTTTGACGATTGATTTAATTATAATTGTTTGTAAACGACTGCATAATTTTTGTAGGCGACCAAACACGAGAAGAACAACAGACCAAGGACAAGTACATCGACAACCTCGGCCATAGCCAGGTCAAGAACATGGCAACCTTCATTACATAGCATCTCAGAAGCTGGTAGCTAATCATTTATGTTCCCTATTTCCCACATGCTATTGAGAGACAGGGTGGCACAGATTGTCCAAGGCTCTTTAAACTTCTCCAAAGAGGGAAAAAAAAAAAAAAAAAAAAAAACAACAGAAAAAGCAGAAAACTGGAGAAAGTGAAAACAAATAAAGATGAGAAGCCAAATGAGCTTTTTAATTCAAGAAGAGAAATTCCTTCAAGAGCAGATCTGGAAGCAAAACAGCATAAAACCGTGCATAGGAAAAGCAGGGTGGGTAACATCTTTGTAAATTCAAAGTCCTTTTCAGTAATGGCTATTGGTCATTGTGCAAAATGAGCTCTGTTTTGATTACCACTCTGTTTCATCTGTTTTAGCAGAATAGAATAGACAAGTGCTTGTGCTTACTCTACTCTGTTGTTTTTGTTGTTATGTTCAATAACATGTAGAGTTGAAGATAAATGTTAAAATGAGTTTAGTTACGTTTAAATTGATTGCAGGGTTCATCTCTCGAGTTCTTTAAAGCTTACAACTCGGGAGAACAGTTGAAGTTGAAGTGACGTGGATTTGCTAGCTAGCTAGCTAGCTTCGTACGGTAATGATTCATTTCCAGCATATTTTCTTGGAACTAATGAAATGGATTAATAATTGTGTCCACTAAATGTAGTTGGAAAGCTATGATTGCTTGGAGTTTAAATGTTACCAAGAAAATCAAATGTTGTAGGGTCAATAGTTTCGTAAAATGATTTGAAACATAGAGGTTAAGATATAATTAAAAAAGGGGAAAAAAGAAATAGAAAAGAGTGAGTCCATGCAAGAAATGAAACCTAAGACAAAATGAGTAAAGATTTAGTGCAATGTGACAGTGCCCCTCGTGCATAGCTACAGTTAAATATCATAATTGTGATCTAATTGGGATGTGATGGATCAGCACTACCCAATTTATTTATATTATTTTTAAACTTTCTCATCATTTTTGTATATATATTTTTTACTCTCATACAATCATTAACTTCATCTTTTTATTTAAAACAAGGGGAATATTCCTCAATGCCCAAACCATCATGATTTTAATAAAGTCTTTCAGATTTCAACCTTTTCTTTTAATTCTCCCTTACTTCAATCCAAAGGAAATTTAGGAGGAGGTGGGCTAGAGTCGAACCCACTAATAGTAGAATGTTTCGTTCTCTTTCCGATTAATATGAGATCTCATAATTCACTCTCGTTCGAGGTTTAACGTTCTCACTGATACTCGTTCCCCTCTTCTCTCACACTTAGGATCAAAAACATATTTGAAGGGGTTGGGGCTCTAAATATTGAAGGGGAGTACCAAAAGTTTTAGAAGAAAGAGATTGCAATTAGGTCCGACGTTGATAGAAAATGTGTGAGTGTAGTAGGAGAGTTGCTGAGGAAAAGGATGAATCTCAAAAACACTATGGAGACGTGGTAGGATAAATGTTGTGTGGTTTGTTGACTGACATATTGGCATGGATAGCTCAAAACCTCGGTGGATTAAACTACCTAAGATGTTACTAAAATGAGACCGATATTGCGCCTCTTTAAGCTTTTTCTTTAGGAAATTCACGGGGAACAATGTAATAGCCCAAGCCCATTGTCCTTTTTAAACCTTTTATTTTGGACTTCCCCTCAGATTTTTAAATTGTGTTTGTTACGGAGAGGTTTTCACACCCTTATAAACAATGTTTCGTTTCTTTTTCTAATCGATGTGGGATTTCATAATCCACTACCCTTCGGGGACCAACATCTTCACTGACACCCGTTTAGCTAATGGAGAAGAAGGTACAAAAGTCAAAATTTTAATGAGGGGTAGAAGAAGAGACATACATATAGATACAGATGTGCAGTCAATTATTATTCTTTCGAAGTGCATCTTCATACTCGTTTTTACTATTCTTGAACATAGAACATCAATCAAC

mRNA sequence

ATGAGTACCTCTCTATCTCTAGTGGCTATAAAAAAAGATTGGTCCTCTTTCCTTGGCCTCCCCTTTTGTTTGTTCATTATCCTCTTCTCCCACAGTTTCATTCCCAGCAGAGAGAGAGAGAGAGAGATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGTTGACAAACTATATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAATCCTGGTCATTATGTTGCTCTTCTTATCTCCACCACCATGGTTACACCGAATGAAAGTTCTAATAACAATGAAACCAGCAAGGTTGAGAAAAAGGAGAATGAAGCCAGAAAGGTTGAGAAAAAGGAGAATGAAGCCAGAAAGGTTGAGAAAAAGGAGAATGAAGGCAGTAGTAATTCGGTTCGTTTAACTAGAATCAAGCTTCTTCGCCCAGCTGACACGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTAAAGAGGTTATGAGTGGTTTATCCGCAAAGAAACAAGCAAAGGTTAAACAAAGCCAGTTAGAAGCCGCTGAGAAGGCAGGGAGGAGGAAAGAACGTGCAGCCAGAGGCTCAGATTCAGCAGCCACCGCCGCAGCTGGAAGATCTGTATCTGAAGATCCTTTTCAGGCGACCAAACACGAGAAGAACAACAGACCAAGGACAAGTACATCGACAACCTCGGCCATAGCCAGGTCAAGAACATGGCAACCTTCATTACATAGCATCTCAGAAGCTGATGAGAAGCCAAATGAGCTTTTTAATTCAAGAAGAGAAATTCCTTCAAGAGCAGATCTGGAAGCAAAACAGCATAAAACCGTGCATAGGAAAAGCAGGGGTTCATCTCTCGAGTTCTTTAAAGCTTACAACTCGGGAGAACAGTTGAAGTTGAAGTGACGTGGATTTGCTAGCTAGCTAGCTAGCTTCGTACGGTAATGATTCATTTCCAGCATATTTTCTTGGAACTAATGAAATGGATTAATAATTGTGTCCACTAAATGTAGTTGGAAAGCTATGATTGCTTGGAGTTTAAATGTTACCAAGAAAATCAAATGTTGTAGGGTCAATAGTTTCGTAAAATGATTTGAAACATAGAGGTTAAGATATAATTAAAAAAGGGGAAAAAAGAAATAGAAAAGAGTGAGTCCATGCAAGAAATGAAACCTAAGACAAAATGAGTAAAGATTTAGTGCAATGTGACAGTGCCCCTCGTGCATAGCTACAGTTAAATATCATAATTGTGATCTAATTGGGATGTGATGGATCAGCACTACCCAATTTATTTATATTATTTTTAAACTTTCTCATCATTTTTGTATATATATTTTTTACTCTCATACAATCATTAACTTCATCTTTTTATTTAAAACAAGGGGAATATTCCTCAATGCCCAAACCATCATGATTTTAATAAAGTCTTTCAGATTTCAACCTTTTCTTTTAATTCTCCCTTACTTCAATCCAAAGGAAATTTAGGAGGAGGTGGGCTAGAGTCGAACCCACTAATAGTAGAATGTTTCGTTCTCTTTCCGATTAATATGAGATCTCATAATTCACTCTCGTTCGAGGTTTAACGTTCTCACTGATACTCGTTCCCCTCTTCTCTCACACTTAGGATCAAAAACATATTTGAAGGGGTTGGGGCTCTAAATATTGAAGGGGAGTACCAAAAGTTTTAGAAGAAAGAGATTGCAATTAGGTCCGACGTTGATAGAAAATGTGTGAGTGTAGTAGGAGAGTTGCTGAGGAAAAGGATGAATCTCAAAAACACTATGGAGACGTGGTAGGATAAATGTTGTGTGGTTTGTTGACTGACATATTGGCATGGATAGCTCAAAACCTCGGTGGATTAAACTACCTAAGATGTTACTAAAATGAGACCGATATTGCGCCTCTTTAAGCTTTTTCTTTAGGAAATTCACGGGGAACAATGTAATAGCCCAAGCCCATTGTCCTTTTTAAACCTTTTATTTTGGACTTCCCCTCAGATTTTTAAATTGTGTTTGTTACGGAGAGGTTTTCACACCCTTATAAACAATGTTTCGTTTCTTTTTCTAATCGATGTGGGATTTCATAATCCACTACCCTTCGGGGACCAACATCTTCACTGACACCCGTTTAGCTAATGGAGAAGAAGGTACAAAAGTCAAAATTTTAATGAGGGGTAGAAGAAGAGACATACATATAGATACAGATGTGCAGTCAATTATTATTCTTTCGAAGTGCATCTTCATACTCGTTTTTACTATTCTTGAACATAGAACATCAATCAAC

Coding sequence (CDS)

ATGAGTACCTCTCTATCTCTAGTGGCTATAAAAAAAGATTGGTCCTCTTTCCTTGGCCTCCCCTTTTGTTTGTTCATTATCCTCTTCTCCCACAGTTTCATTCCCAGCAGAGAGAGAGAGAGAGAGATGGGAAATTGCCAAGCCATTGATGCAGCAACACTTGTGATACAACACCCAAGTGGGAAAGTTGACAAACTATATTGGCCTGTGACTGCTAGAGAGATCATGAAGATGAATCCTGGTCATTATGTTGCTCTTCTTATCTCCACCACCATGGTTACACCGAATGAAAGTTCTAATAACAATGAAACCAGCAAGGTTGAGAAAAAGGAGAATGAAGCCAGAAAGGTTGAGAAAAAGGAGAATGAAGCCAGAAAGGTTGAGAAAAAGGAGAATGAAGGCAGTAGTAATTCGGTTCGTTTAACTAGAATCAAGCTTCTTCGCCCAGCTGACACGCTTGTTCTTGGCCAAGTTTACAGGCTCATCACTTCTAAAGAGGTTATGAGTGGTTTATCCGCAAAGAAACAAGCAAAGGTTAAACAAAGCCAGTTAGAAGCCGCTGAGAAGGCAGGGAGGAGGAAAGAACGTGCAGCCAGAGGCTCAGATTCAGCAGCCACCGCCGCAGCTGGAAGATCTGTATCTGAAGATCCTTTTCAGGCGACCAAACACGAGAAGAACAACAGACCAAGGACAAGTACATCGACAACCTCGGCCATAGCCAGGTCAAGAACATGGCAACCTTCATTACATAGCATCTCAGAAGCTGATGAGAAGCCAAATGAGCTTTTTAATTCAAGAAGAGAAATTCCTTCAAGAGCAGATCTGGAAGCAAAACAGCATAAAACCGTGCATAGGAAAAGCAGGGGTTCATCTCTCGAGTTCTTTAAAGCTTACAACTCGGGAGAACAGTTGAAGTTGAAGTGA

Protein sequence

MSTSLSLVAIKKDWSSFLGLPFCLFIILFSHSFIPSREREREMGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNNETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLITSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATKHEKNNRPRTSTSTTSAIARSRTWQPSLHSISEADEKPNELFNSRREIPSRADLEAKQHKTVHRKSRGSSLEFFKAYNSGEQLKLK

Homology

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BLAST of CmaCh11G001110 vs. TrEMBL
Match: A0A0A0LRI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005650 PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 6.2e-74
Identity = 165/213 (77.46%), Postives = 172/213 (80.75%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNN
Sbjct: 1   MGNCQAIDAATLVIQHPSGKEDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
           +TS                          NE SSNSVRLTRIKLLRPAD LVLGQVYRLI
Sbjct: 61  QTS--------------------------NETSSNSVRLTRIKLLRPADMLVLGQVYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           T++EVM GLSAKKQAKVKQSQLEAA+K  RRK+R  R SD+AA AAAGRSVSED  QA K
Sbjct: 121 TTQEVMKGLSAKKQAKVKQSQLEAADKPDRRKQRTTRSSDAAA-AAAGRSVSEDQIQANK 180

Query: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
           HEKNNRPRTSTSTTSA ARSRTWQPSLHSISEA
Sbjct: 181 HEKNNRPRTSTSTTSATARSRTWQPSLHSISEA 186

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BLAST of CmaCh11G001110 vs. TrEMBL
Match: A0A067FUD9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029547mg PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.1e-44
Identity = 118/213 (55.40%), Postives = 143/213 (67.14%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQAIDAATL IQHP GKVDK YWPV+A E+M+MNPGHYV+LLISTT+   N  +NNN
Sbjct: 1   MGNCQAIDAATLAIQHPCGKVDKFYWPVSACEVMRMNPGHYVSLLISTTLCPTN--TNNN 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
           +         +  +V    + +  +    N G+ NSVRLTRIKLLRP DTLVLGQVYRLI
Sbjct: 61  K---------DKEEVPANNSSSSSISITNNNGNGNSVRLTRIKLLRPTDTLVLGQVYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           T+++VM GLSAKKQAK+ +++ ++AEK  R  E               RS  E   Q  K
Sbjct: 121 TAQDVMKGLSAKKQAKMNRNRPQSAEKPERVNEEPK------------RSELEKDNQVMK 180

Query: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
            E+ +RPRT+ ST SA ARSR WQPSL SISEA
Sbjct: 181 QER-HRPRTTVSTNSAAARSRNWQPSLQSISEA 189

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BLAST of CmaCh11G001110 vs. TrEMBL
Match: V4SYI6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022406mg PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 5.1e-44
Identity = 121/213 (56.81%), Postives = 144/213 (67.61%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQAIDAATL IQHP GKVDK YWPV+A E+M+MNPGHYVALLISTT    N  +NNN
Sbjct: 1   MGNCQAIDAATLAIQHPCGKVDKFYWPVSACEVMRMNPGHYVALLISTTSCPTN--TNNN 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
           +    +K+E  A       + +  +    N G+ NSVRLTRIKLLRP DTLVLGQVYRLI
Sbjct: 61  K----DKEEGPANN-----SSSSSISITNNNGNGNSVRLTRIKLLRPTDTLVLGQVYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           T+++VM GLSAKKQAK+ +++ ++AEK  R  E               RS  E   Q  K
Sbjct: 121 TAQDVMKGLSAKKQAKMNRNRPQSAEKPERVNEEPK------------RSELEKDNQVMK 180

Query: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
            E+ +RPRT+ ST SA ARSR WQPSL SISEA
Sbjct: 181 QER-HRPRTTVSTNSAAARSRNWQPSLQSISEA 189

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BLAST of CmaCh11G001110 vs. TrEMBL
Match: M5WNG1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011668mg PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.1e-43
Identity = 121/217 (55.76%), Postives = 143/217 (65.90%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQAIDAATLVIQHPSGK +K YW V+A EIMK NPGHYVALLISTT+   N ++N +
Sbjct: 1   MGNCQAIDAATLVIQHPSGKEEKFYWSVSASEIMKTNPGHYVALLISTTLCPSNPNNNGD 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
           +  K          + +K+N         N  +S SVRLTRIKLLRP DTLVLGQVYRLI
Sbjct: 61  KKDK---------NLNQKDN--------NNNNNSTSVRLTRIKLLRPTDTLVLGQVYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           T++EVM GL AKKQAKVK+S     E A + +ER        A   +  S  E   Q  K
Sbjct: 121 TTQEVMKGLWAKKQAKVKRSHSNQVE-AEQPQERVREKPVLTAARRSEASELEKDNQVAK 180

Query: 223 HEKNNRPRT----STSTTSAIARSRTWQPSLHSISEA 256
           HE+ +RPRT    ST  +++ ARSRTWQPSLHSISEA
Sbjct: 181 HERGHRPRTAATSSTHQSASTARSRTWQPSLHSISEA 199

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BLAST of CmaCh11G001110 vs. TrEMBL
Match: A0A061G0Q8_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_011995 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 3.7e-42
Identity = 121/217 (55.76%), Postives = 143/217 (65.90%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQA+DAATLVIQHPSGKVDK YWP++A EIM+MNPGHYVALLISTT+     SSNN+
Sbjct: 1   MGNCQAVDAATLVIQHPSGKVDKFYWPMSASEIMRMNPGHYVALLISTTLY---HSSNND 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
           +       +N A  V                   N VRLTRIKLLRP DTLVLGQVYRLI
Sbjct: 61  KCP-----DNSANNV-------------------NPVRLTRIKLLRPTDTLVLGQVYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAA----EKAGRRKERAARGSDSAATAAAGRSVSEDPF 222
           T++EVM GL AKK AK+K++Q E+A    EKAG R E   R           RS  +   
Sbjct: 121 TTQEVMKGLCAKKHAKMKKNQQESAEKPFEKAGLRPETVGR-----------RSEPDKEN 177

Query: 223 QATKHEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
           + +KHE+ +RPR++ S  SA ARS+TWQPSL SISEA
Sbjct: 181 KVSKHER-HRPRSTPSANSA-ARSKTWQPSLQSISEA 177

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BLAST of CmaCh11G001110 vs. TAIR10
Match: AT1G60010.1 (AT1G60010.1 unknown protein)

HSP 1 Score: 125.2 bits (313), Expect = 7.1e-29
Identity = 90/213 (42.25%), Postives = 118/213 (55.40%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQA+DAA LV+QHP GK+D+ Y PV+  EIM+M PGHYV+L+I      P ++    
Sbjct: 1   MGNCQAVDAAALVLQHPDGKIDRYYGPVSVSEIMRMYPGHYVSLIIP----LPEKNIPAT 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
            T+  +K E             RKV           VR TR+KLLRP + LVLG  YRLI
Sbjct: 61  TTTTDDKSE-------------RKV-----------VRFTRVKLLRPTENLVLGHAYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           TS+EVM  L AKK AK K+ Q E +      KE+    S+        + + E+  +   
Sbjct: 121 TSQEVMKVLRAKKYAKTKKHQSETS------KEKKKPSSE--------KKIDEESDKNQN 171

Query: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
            E  +  + S  T SA +RS+TW+PSL SISEA
Sbjct: 181 LETKDEKQRSVLTNSASSRSKTWRPSLQSISEA 171

[Close]

BLAST of CmaCh11G001110 vs. TAIR10
Match: AT1G10530.1 (AT1G10530.1 unknown protein)

HSP 1 Score: 107.1 bits (266), Expect = 2.0e-23
Identity = 80/214 (37.38%), Postives = 108/214 (50.47%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQA++AA LV+QHP G +D+ Y  V+  E+M M PGHYV+L+I  +           
Sbjct: 1   MGNCQAVNAAVLVLQHPGGIIDRYYSSVSVTEVMAMYPGHYVSLIIPLS----------- 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
                          E++E      EK +++    +VR TR++LLRP + LVLG  YRLI
Sbjct: 61  ---------------EEEEKNIPATEKGDDKKQRKAVRFTRVQLLRPTENLVLGHAYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           TS+EVM  L  KK AK K+ Q+E    A                    +  S+      K
Sbjct: 121 TSQEVMKVLREKKSAKTKKHQIEKTTTA--------------------KKFSDKKVPEKK 164

Query: 223 HEKNNRP-RTSTSTTSAIARSRTWQPSLHSISEA 256
             K  R  R STS    + +S+TW+PSL SISEA
Sbjct: 181 QGKQFRVIRNSTS----LLKSKTWRPSLQSISEA 164

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BLAST of CmaCh11G001110 vs. TAIR10
Match: AT5G50090.1 (AT5G50090.1 unknown protein)

HSP 1 Score: 75.5 bits (184), Expect = 6.4e-14
Identity = 35/58 (60.34%), Postives = 45/58 (77.59%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSN 101
           MGNCQA+D A +VIQHP+GK +KL  PV+A  +MKMNPGH V+LLISTT ++   S +
Sbjct: 1   MGNCQAVDTARVVIQHPNGKEEKLSCPVSASYVMKMNPGHCVSLLISTTALSSASSGH 58

[Close]

BLAST of CmaCh11G001110 vs. TAIR10
Match: AT5G67620.1 (AT5G67620.1 unknown protein)

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-12
Identity = 29/49 (59.18%), Postives = 42/49 (85.71%), Query Frame = 1


Query: 43 MGNCQAIDAATLVIQHPS-GKVDKLYWPVTAREIMKMNPGHYVALLIST 91
          MGNCQA +AAT++I HP+  KV+++YW VTA +IMK NPGHYVA+++++
Sbjct: 1  MGNCQAAEAATVLIHHPAENKVERIYWSVTASDIMKSNPGHYVAVVVTS 49

[Close]

BLAST of CmaCh11G001110 vs. TAIR10
Match: AT5G62900.1 (AT5G62900.1 unknown protein)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 50/120 (41.67%), Postives = 66/120 (55.00%), Query Frame = 1


Query: 138 SVRLTRIKLLRPADTLVLGQVYRLITSKEVMSGLSAKKQAKVKQ--SQLEAAEKAGRRKE 197
           S+R+TRIKLLRP+D L+LG VYRLI+S+EVM G+ AKK  K+K+   +   AE+      
Sbjct: 55  SLRVTRIKLLRPSDNLLLGHVYRLISSEEVMKGIRAKKSGKMKKIHGEFSVAEE------ 114

Query: 198 RAARGSDSAATAAAGRSVSEDPFQATKHEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
                 +         S S+   Q   HEK    R   +T  A  + R WQPSL SISE+
Sbjct: 115 ------EINPLTLRSESASDKDTQRRIHEKQ---RGMMNTGGATNKVRAWQPSLQSISES 159

[Close]

BLAST of CmaCh11G001110 vs. NCBI nr
Match: gi|449440706|ref|XP_004138125.1| (PREDICTED: uncharacterized protein LOC101211887 [Cucumis sativus])

HSP 1 Score: 285.8 bits (730), Expect = 8.9e-74
Identity = 165/213 (77.46%), Postives = 172/213 (80.75%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+NNN
Sbjct: 1   MGNCQAIDAATLVIQHPSGKEDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNNN 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
           +TS                          NE SSNSVRLTRIKLLRPAD LVLGQVYRLI
Sbjct: 61  QTS--------------------------NETSSNSVRLTRIKLLRPADMLVLGQVYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           T++EVM GLSAKKQAKVKQSQLEAA+K  RRK+R  R SD+AA AAAGRSVSED  QA K
Sbjct: 121 TTQEVMKGLSAKKQAKVKQSQLEAADKPDRRKQRTTRSSDAAA-AAAGRSVSEDQIQANK 180

Query: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
           HEKNNRPRTSTSTTSA ARSRTWQPSLHSISEA
Sbjct: 181 HEKNNRPRTSTSTTSATARSRTWQPSLHSISEA 186

[Close]

BLAST of CmaCh11G001110 vs. NCBI nr
Match: gi|659105539|ref|XP_008453120.1| (PREDICTED: uncharacterized protein LOC103493930 [Cucumis melo])

HSP 1 Score: 281.2 bits (718), Expect = 2.2e-72
Identity = 163/213 (76.53%), Postives = 169/213 (79.34%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQAIDAATLVIQHPSGK DKLYWPVTAREIMKMNPGHYVALLISTTM TPNES+N+N
Sbjct: 1   MGNCQAIDAATLVIQHPSGKEDKLYWPVTAREIMKMNPGHYVALLISTTMFTPNESNNSN 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
           +TS                          NE SSNSVRLTRIKLLRPAD LVLGQVYRLI
Sbjct: 61  QTS--------------------------NETSSNSVRLTRIKLLRPADMLVLGQVYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           T++EVM GLSAKKQAKVKQSQLEAA+K  RRKER  R SD    AAAGRSVSED  QA K
Sbjct: 121 TTQEVMKGLSAKKQAKVKQSQLEAADKPDRRKERTTRSSD----AAAGRSVSEDQIQANK 180

Query: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
           HEKNNRPRTSTSTTSA ARSRTWQPSLHSISEA
Sbjct: 181 HEKNNRPRTSTSTTSATARSRTWQPSLHSISEA 183

[Close]

BLAST of CmaCh11G001110 vs. NCBI nr
Match: gi|1009131049|ref|XP_015882630.1| (PREDICTED: uncharacterized protein DDB_G0285917 [Ziziphus jujuba])

HSP 1 Score: 188.7 bits (478), Expect = 1.5e-44
Identity = 120/221 (54.30%), Postives = 142/221 (64.25%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTM--------VT 102
           MGNCQAIDAATLVIQHP+GKV+KLYWPV+A E+MK NPGHYVALLISTT+        V 
Sbjct: 1   MGNCQAIDAATLVIQHPNGKVEKLYWPVSASEVMKTNPGHYVALLISTTLCPLKTNEHVA 60

Query: 103 PNESSNNNETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLV 162
            +E  NNNE +                          N   +NSVRLTRIKLLRP DTLV
Sbjct: 61  NHERPNNNENNH-----------------------NNNNNKNNSVRLTRIKLLRPTDTLV 120

Query: 163 LGQVYRLITSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVS 222
           LGQ YRLITS+EVM GL AKKQAK+K++  E  +   R++E+   GS           + 
Sbjct: 121 LGQAYRLITSQEVMKGLWAKKQAKLKKNHPEGEKPLERQREKP--GSGPVIATRGSELLE 180

Query: 223 EDPFQATKHEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
           +D     KHE+ +RPRT+T+T SA ARSRTWQPSL SISEA
Sbjct: 181 KDNQVIIKHER-HRPRTTTATPSATARSRTWQPSLKSISEA 195

[Close]

BLAST of CmaCh11G001110 vs. NCBI nr
Match: gi|641850888|gb|KDO69760.1| (hypothetical protein CISIN_1g029547mg [Citrus sinensis])

HSP 1 Score: 186.4 bits (472), Expect = 7.4e-44
Identity = 118/213 (55.40%), Postives = 143/213 (67.14%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQAIDAATL IQHP GKVDK YWPV+A E+M+MNPGHYV+LLISTT+   N  +NNN
Sbjct: 1   MGNCQAIDAATLAIQHPCGKVDKFYWPVSACEVMRMNPGHYVSLLISTTLCPTN--TNNN 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
           +         +  +V    + +  +    N G+ NSVRLTRIKLLRP DTLVLGQVYRLI
Sbjct: 61  K---------DKEEVPANNSSSSSISITNNNGNGNSVRLTRIKLLRPTDTLVLGQVYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           T+++VM GLSAKKQAK+ +++ ++AEK  R  E               RS  E   Q  K
Sbjct: 121 TAQDVMKGLSAKKQAKMNRNRPQSAEKPERVNEEPK------------RSELEKDNQVMK 180

Query: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
            E+ +RPRT+ ST SA ARSR WQPSL SISEA
Sbjct: 181 QER-HRPRTTVSTNSAAARSRNWQPSLQSISEA 189

[Close]

BLAST of CmaCh11G001110 vs. NCBI nr
Match: gi|567894530|ref|XP_006439753.1| (hypothetical protein CICLE_v10022406mg [Citrus clementina])

HSP 1 Score: 186.4 bits (472), Expect = 7.4e-44
Identity = 121/213 (56.81%), Postives = 144/213 (67.61%), Query Frame = 1


Query: 43  MGNCQAIDAATLVIQHPSGKVDKLYWPVTAREIMKMNPGHYVALLISTTMVTPNESSNNN 102
           MGNCQAIDAATL IQHP GKVDK YWPV+A E+M+MNPGHYVALLISTT    N  +NNN
Sbjct: 1   MGNCQAIDAATLAIQHPCGKVDKFYWPVSACEVMRMNPGHYVALLISTTSCPTN--TNNN 60

Query: 103 ETSKVEKKENEARKVEKKENEARKVEKKENEGSSNSVRLTRIKLLRPADTLVLGQVYRLI 162
           +    +K+E  A       + +  +    N G+ NSVRLTRIKLLRP DTLVLGQVYRLI
Sbjct: 61  K----DKEEGPANN-----SSSSSISITNNNGNGNSVRLTRIKLLRPTDTLVLGQVYRLI 120

Query: 163 TSKEVMSGLSAKKQAKVKQSQLEAAEKAGRRKERAARGSDSAATAAAGRSVSEDPFQATK 222
           T+++VM GLSAKKQAK+ +++ ++AEK  R  E               RS  E   Q  K
Sbjct: 121 TAQDVMKGLSAKKQAKMNRNRPQSAEKPERVNEEPK------------RSELEKDNQVMK 180

Query: 223 HEKNNRPRTSTSTTSAIARSRTWQPSLHSISEA 256
            E+ +RPRT+ ST SA ARSR WQPSL SISEA
Sbjct: 181 QER-HRPRTTVSTNSAAARSRNWQPSLQSISEA 189

The following BLAST results are available for this feature:

BLAST of CmaCh11G001110 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh11G001110 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRI4_CUCSA	6.2e-74	77.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005650 PE=4 SV=1	[more]
A0A067FUD9_CITSI	5.1e-44	55.40	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029547mg PE=4 SV=1	[more]
V4SYI6_9ROSI	5.1e-44	56.81	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022406mg PE=4 SV=1	[more]
M5WNG1_PRUPE	1.1e-43	55.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011668mg PE=4 SV=1	[more]
A0A061G0Q8_THECC	3.7e-42	55.76	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_011995 PE=4 SV=1	[more]

BLAST of CmaCh11G001110 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G60010.1	7.1e-29	42.25	unknown protein	[more]
AT1G10530.1	2.0e-23	37.38	unknown protein	[more]
AT5G50090.1	6.4e-14	60.34	unknown protein	[more]
AT5G67620.1	2.1e-12	59.18	unknown protein	[more]
AT5G62900.1	1.1e-10	41.67	unknown protein	[more]

BLAST of CmaCh11G001110 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449440706\|ref\|XP_004138125.1\|	8.9e-74	77.46	PREDICTED: uncharacterized protein LOC101211887 [Cucumis sativus]	[more]
gi\|659105539\|ref\|XP_008453120.1\|	2.2e-72	76.53	PREDICTED: uncharacterized protein LOC103493930 [Cucumis melo]	[more]
gi\|1009131049\|ref\|XP_015882630.1\|	1.5e-44	54.30	PREDICTED: uncharacterized protein DDB_G0285917 [Ziziphus jujuba]	[more]
gi\|641850888\|gb\|KDO69760.1\|	7.4e-44	55.40	hypothetical protein CISIN_1g029547mg [Citrus sinensis]	[more]
gi\|567894530\|ref\|XP_006439753.1\|	7.4e-44	56.81	hypothetical protein CICLE_v10022406mg [Citrus clementina]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh11G001110.1	CmaCh11G001110.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 43..254 score: 1.0
None	No IPR available	unknown	Coil	Coil	coord: 100..130 scor
None	No IPR available	PANTHER	PTHR33413	FAMILY NOT NAMED	coord: 131..273 score: 5.7E-82coord: 24..99 score: 5.7
None	No IPR available	PANTHER	PTHR33413:SF5	SUBFAMILY NOT NAMED	coord: 131..273 score: 5.7E-82coord: 24..99 score: 5.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh11G001110	Cucsa.098250	Cucumber (Gy14) v1	cgycmaB0209
CmaCh11G001110	Cucsa.197130	Cucumber (Gy14) v1	cgycmaB0576
CmaCh11G001110	Cla019171	Watermelon (97103) v1	cmawmB144
CmaCh11G001110	Csa1G045900	Cucumber (Chinese Long) v2	cmacuB107
CmaCh11G001110	Csa1G005650	Cucumber (Chinese Long) v2	cmacuB086
CmaCh11G001110	MELO3C002244	Melon (DHL92) v3.5.1	cmameB088
CmaCh11G001110	MELO3C017113	Melon (DHL92) v3.5.1	cmameB121
CmaCh11G001110	ClCG06G016790	Watermelon (Charleston Gray)	cmawcgB136
CmaCh11G001110	CSPI01G08290	Wild cucumber (PI 183967)	cmacpiB103
CmaCh11G001110	CSPI01G01660	Wild cucumber (PI 183967)	cmacpiB085
CmaCh11G001110	CmoCh10G001500	Cucurbita moschata (Rifu)	cmacmoB100
CmaCh11G001110	CmoCh18G001180	Cucurbita moschata (Rifu)	cmacmoB138
CmaCh11G001110	CmoCh11G001130	Cucurbita moschata (Rifu)	cmacmoB114
CmaCh11G001110	Lsi06G015290	Bottle gourd (USVL1VR-Ls)	cmalsiB144
CmaCh11G001110	Lsi02G003520	Bottle gourd (USVL1VR-Ls)	cmalsiB112
CmaCh11G001110	Cp4.1LG18g08300	Cucurbita pepo (Zucchini)	cmacpeB133
CmaCh11G001110	Cp4.1LG04g15540	Cucurbita pepo (Zucchini)	cmacpeB155
CmaCh11G001110	MELO3C002244.2	Melon (DHL92) v3.6.1	cmamedB096
CmaCh11G001110	MELO3C017113.2	Melon (DHL92) v3.6.1	cmamedB129
CmaCh11G001110	CsaV3_1G008280	Cucumber (Chinese Long) v3	cmacucB0121
CmaCh11G001110	CsaV3_1G001730	Cucumber (Chinese Long) v3	cmacucB0100
CmaCh11G001110	Cla97C06G126410	Watermelon (97103) v2	cmawmbB140
CmaCh11G001110	Bhi02G000312	Wax gourd	cmawgoB0167
CmaCh11G001110	Bhi08G001289	Wax gourd	cmawgoB0139
CmaCh11G001110	CsGy1G008200	Cucumber (Gy14) v2	cgybcmaB048
CmaCh11G001110	CsGy1G001690	Cucumber (Gy14) v2	cgybcmaB028
CmaCh11G001110	Carg06709	Silver-seed gourd	carcmaB0688
CmaCh11G001110	Carg10367	Silver-seed gourd	carcmaB0511
CmaCh11G001110	Carg18146	Silver-seed gourd	carcmaB0860

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh11G001110	CmaCh10G001430	Cucurbita maxima (Rimu)	cmacmaB073
CmaCh11G001110	CmaCh13G009030	Cucurbita maxima (Rimu)	cmacmaB126
CmaCh11G001110	CmaCh18G001500	Cucurbita maxima (Rimu)	cmacmaB141

The following block(s) are covering this gene:

None