CmaCh10G009540 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTTCTTGGACTCAACTACTACACAACTGCATATGCCATCGATGATTCCAGCGCTCATGTCCTATACCCTTCCTGGTTTACCGATTCTGGTGTAAATACTTCAAGTATGGGCTTCATATTATATCATTCAAAATCCTATCCTTTTTCTAAAACATTTTGTAAAATTATTTTTCTATCTTTCATAACTTTTAAAAATCTCTCATTAAATTTTGTATGATGTGCTTCGATTTGCTCTGATCGTTTCGTGAAGTTTCACTTAGACCAAAGGTAATTTATGCAAATTTTCGTCAATTATGAACTTAACTAATCACACTTGGCTAATCGTCTCTTTCAATGGTAGATGAATGCGACGTCTTGGCTTTCAGTTTATCCCGAGGGATTGCAAAAATTGTTGATAATCATGAAAAATGATTATAACAATCTATCTATCTACATCACAAAAAATGGTATCGAAAAAAAGCTCTTTTTTTTTTTCAAATGAAGAAAAAAGAGAAATTGTTATTAAAAACCTTATTTATTAATGAAATGATACATGTGCAGGTTTCTTTGATTATGATGATCCTAATGTTCATAATCTACTTTCTGACAATAAGAGAATTAATTACCAAATGAAACATCTCTTTTATCTTCACCAAGCAATGATGTAAGTAACTGAATGAGAGATTCTCTTCTCTTTTTCCTACTCACCCATTTTCGTCCATATTCGTATTTGGAAATTTAATGTTTGATATTGTGAGATCCCACGTCAGTTGGAGAGGGAAACAAAATATTTATTAGAATGGTCTGGAAAGGTGGGTTTAGGCAAGCGGTGTGTGCTTGCAAGGATGCTGGCTGGGTCCCCAAAGAGGGTGGATTGTGAGATCCCACTTCACGTAGTAAGAGAGGGGAACGAAATATTGCTTAGGGTGTGAAAATCTCTCCCTAGTGGGTTTGGGCTTTTACATCTATTTAATATTTGTGATATTCAGACAATATCTTAGTGGAAGCCACACCCTTATAAAGTGCTCCTCCCCAACAATGTGGGACATCACAATCCACCCCCCTTTGGGGCTAGCGTCTTCGTTGGCACTCGTTTCTTTCTCTAATCGATGTGGAACCCCTCTCCAAATCCACCCCCTTTGGGGCCAGCGTTCTTACTGCCACACCGCCTCATGTCTACCCCCCTTCGGGGAACAGCGAGAAGGTTGACACATCGTCCGGTGTTTGGCTTTGATATCATTTGTAATGACTCAGATCTATCGCTAGCAGATATTGTTCTCTTTGGGCTTTTCCTCTCGGACTTCTACTCAAGGCTTTAAAACACGTCTGCTAGAGGAAGGTTTCCACACCCTATCAGTTAGGATAGTTTTCTCTCTTAGAAGCTCAAAGAAATAAGTAATCATGTAGTAGGGAAGGTAAGTAAGGAAATCTCAGAACCATCCCATCCTAGACTTGGGACTTACAACAAACAACATTAAACAAACAGACCTCATTTTTGTTGGTTTAAATATAGTGTTTTGTTGTGTTTCTTTGTCATTAATAATGTTCTTACAAAACTTTGGAAAAATTATAGGGATGGCGTAAGGGTAAATGGATACTTTGCATGGTCATTGCTGGACACTTTTGAGTGGTCAGATGGATATACAAAGCGCTTCGGCCTCGTCTACATCGATCGCAATAACAACCTGACCAGAACACCAAAGGATTCACTAAAATGGTTCTCTTATTTCCTCAAGGGATGA ATGACTTTCTTGGACTCAACTACTACACAACTGCATATGCCATCGATGATTCCAGCGCTCATGTCCTATACCCTTCCTGGTTTCTTTGATTATGATGATCCTAATGTTCATAATCTACTTTCTGACAATAAGAGAATTAATTACCAAATGAAACATCTCTTTTATCTTCACCAAGCAATGATGGATGGCGTAAGGGTAAATGGATACTTTGCATGGTCATTGCTGGACACTTTTGAGTGGTCAGATGGATATACAAAGCGCTTCGGCCTCGTCTACATCGATCGCAATAACAACCTGACCAGAACACCAAAGGATTCACTAAAATGGTTCTCTTATTTCCTCAAGGGATGA ATGACTTTCTTGGACTCAACTACTACACAACTGCATATGCCATCGATGATTCCAGCGCTCATGTCCTATACCCTTCCTGGTTTCTTTGATTATGATGATCCTAATGTTCATAATCTACTTTCTGACAATAAGAGAATTAATTACCAAATGAAACATCTCTTTTATCTTCACCAAGCAATGATGGATGGCGTAAGGGTAAATGGATACTTTGCATGGTCATTGCTGGACACTTTTGAGTGGTCAGATGGATATACAAAGCGCTTCGGCCTCGTCTACATCGATCGCAATAACAACCTGACCAGAACACCAAAGGATTCACTAAAATGGTTCTCTTATTTCCTCAAGGGATGA MTFLDSTTTQLHMPSMIPALMSYTLPGFFDYDDPNVHNLLSDNKRINYQMKHLFYLHQAMMDGVRVNGYFAWSLLDTFEWSDGYTKRFGLVYIDRNNNLTRTPKDSLKWFSYFLKG
BLAST of CmaCh10G009540 vs. Swiss-Prot
Match: BGL42_ARATH (Beta-glucosidase 42 OS=Arabidopsis thaliana GN=BGLU42 PE=2 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 9.3e-24 Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 1
BLAST of CmaCh10G009540 vs. Swiss-Prot
Match: BGL04_ORYSJ (Beta-glucosidase 4 OS=Oryza sativa subsp. japonica GN=BGLU4 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 3.7e-20 Identity = 45/87 (51.72%), Postives = 57/87 (65.52%), Query Frame = 1
BLAST of CmaCh10G009540 vs. Swiss-Prot
Match: BGL10_ORYSJ (Beta-glucosidase 10 OS=Oryza sativa subsp. japonica GN=BGLU10 PE=2 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.1e-19 Identity = 43/76 (56.58%), Postives = 53/76 (69.74%), Query Frame = 1
BLAST of CmaCh10G009540 vs. Swiss-Prot
Match: BGL32_ARATH (Beta-glucosidase 32 OS=Arabidopsis thaliana GN=BGLU32 PE=2 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 1.8e-19 Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 1
BLAST of CmaCh10G009540 vs. Swiss-Prot
Match: BGL28_ARATH (Beta-glucosidase 28 OS=Arabidopsis thaliana GN=BGLU28 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 2.4e-19 Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 1
BLAST of CmaCh10G009540 vs. TrEMBL
Match: Q9FVL4_CUCPE (Silverleaf whitefly-induced protein 3 OS=Cucurbita pepo GN=SLW3 PE=2 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 2.6e-25 Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = 1
BLAST of CmaCh10G009540 vs. TrEMBL
Match: A0A0A0M010_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G612860 PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 2.7e-22 Identity = 50/89 (56.18%), Postives = 63/89 (70.79%), Query Frame = 1
BLAST of CmaCh10G009540 vs. TrEMBL
Match: A0A151R5T1_CAJCA (Beta-glucosidase 6 (Fragment) OS=Cajanus cajan GN=KK1_040903 PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 7.9e-22 Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 1
BLAST of CmaCh10G009540 vs. TrEMBL
Match: R0GZG2_9BRAS (Beta-glucosidase OS=Capsella rubella GN=CARUB_v10004671mg PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 1.0e-21 Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 1
BLAST of CmaCh10G009540 vs. TrEMBL
Match: A0A0B2RCK9_GLYSO (Beta-glucosidase 24 OS=Glycine soja GN=glysoja_010487 PE=3 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.8e-21 Identity = 54/98 (55.10%), Postives = 64/98 (65.31%), Query Frame = 1
BLAST of CmaCh10G009540 vs. TAIR10
Match: AT5G36890.1 (AT5G36890.1 beta glucosidase 42) HSP 1 Score: 110.9 bits (276), Expect = 5.2e-25 Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 1
BLAST of CmaCh10G009540 vs. TAIR10
Match: AT5G24550.1 (AT5G24550.1 beta glucosidase 32) HSP 1 Score: 96.7 bits (239), Expect = 1.0e-20 Identity = 46/92 (50.00%), Postives = 58/92 (63.04%), Query Frame = 1
BLAST of CmaCh10G009540 vs. TAIR10
Match: AT2G44460.1 (AT2G44460.1 beta glucosidase 28) HSP 1 Score: 96.3 bits (238), Expect = 1.3e-20 Identity = 46/91 (50.55%), Postives = 60/91 (65.93%), Query Frame = 1
BLAST of CmaCh10G009540 vs. TAIR10
Match: AT5G24540.1 (AT5G24540.1 beta glucosidase 31) HSP 1 Score: 94.0 bits (232), Expect = 6.6e-20 Identity = 47/92 (51.09%), Postives = 55/92 (59.78%), Query Frame = 1
BLAST of CmaCh10G009540 vs. TAIR10
Match: AT3G60140.1 (AT3G60140.1 Glycosyl hydrolase superfamily protein) HSP 1 Score: 94.0 bits (232), Expect = 6.6e-20 Identity = 47/92 (51.09%), Postives = 56/92 (60.87%), Query Frame = 1
BLAST of CmaCh10G009540 vs. NCBI nr
Match: gi|10998338|gb|AAG25897.1|AF170087_1 (silverleaf whitefly-induced protein 3 [Cucurbita pepo]) HSP 1 Score: 122.9 bits (307), Expect = 3.8e-25 Identity = 53/88 (60.23%), Postives = 66/88 (75.00%), Query Frame = 1
BLAST of CmaCh10G009540 vs. NCBI nr
Match: gi|659085205|ref|XP_008443299.1| (PREDICTED: beta-glucosidase 24-like [Cucumis melo]) HSP 1 Score: 118.6 bits (296), Expect = 7.1e-24 Identity = 56/91 (61.54%), Postives = 63/91 (69.23%), Query Frame = 1
BLAST of CmaCh10G009540 vs. NCBI nr
Match: gi|659099144|ref|XP_008450450.1| (PREDICTED: LOW QUALITY PROTEIN: beta-glucosidase 13-like [Cucumis melo]) HSP 1 Score: 115.2 bits (287), Expect = 7.9e-23 Identity = 53/90 (58.89%), Postives = 65/90 (72.22%), Query Frame = 1
BLAST of CmaCh10G009540 vs. NCBI nr
Match: gi|700211366|gb|KGN66462.1| (hypothetical protein Csa_1G612860 [Cucumis sativus]) HSP 1 Score: 112.8 bits (281), Expect = 3.9e-22 Identity = 50/89 (56.18%), Postives = 63/89 (70.79%), Query Frame = 1
BLAST of CmaCh10G009540 vs. NCBI nr
Match: gi|1012326043|gb|KYP37883.1| (Beta-glucosidase 6, partial [Cajanus cajan]) HSP 1 Score: 111.3 bits (277), Expect = 1.1e-21 Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |