CmaCh10G005670 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATCAGATGTCATGTTGAAAAGACAGCATTTTGAGACCAAAAATGGAAATGGTATTTGGGTGGGCAGCAAATCGAACGTTCCGTTTATCCTCTTCTCGATGCCAAATTTATATTATGCATTCTTTCTGTTCATCATTCGTCGAAATTCGTTAGCCTTTTCCTTTTCCCGTCTCGCCGGAGATCGACTTCTTTTCTTTGATGCATGTTTTTTCTCCGATGGGCAGAGAAGAATAAGGCAAAGGAAAACTGAAAGAAAATAGCTTTCTTTTCTAGGTTTTCCAAATTTTGATTCATTTTGGGAACGTTCAGGGATATACATATTCTAGCTAGACATTTTTTGGAGATGGGAGCAGAGAGCACCTCGAAAACGACCCCCGAAAGTGGAGATAGGAACGATAAGAAGAAGACCCAGGTGGTGTTGAACGTTTATGATCTCACCCCTGCCAACAATTATTCCTATTGGTTTGGTTTTGGGGTTTTCCATTCGGGTATTGAAGGTGATTTCCTTATCCTGCTTCTGCCCTTCCCCTGTTTGATATCTTCCTGATTTTGATGCACCCTTTGTGTTTGTTAAAATGTCTCTGAAGAAATGTTATTGAAACTGTTCCTTTTCTTTTGGAATTGTGTTAAGCTTTTGGTTTTGAATGTAACTGAAATGAAATTTTAGCATGGGAATAAGAGAACATGGAACTTAGGAGGCTGAATCTGGATTGACACCTTTTTACATAGAAAATTCAAGATTATGAGCTCAGAATTTTCAATTCAATGCTATCTTCCTGTTGTGAACCCAACGTATGAATTCATTCAAATGTCTTTCATATTGCACAACAGTCCATGGCAAAGAGTATGGGTTTGGAGGTCATGACTTCCCCGCTAGTGGAGTTTTTGAAGTAGAACCAAGGAGCTGTCCAGGCTTTATATACCGATGTTCTGTCACGTTGGGACATGCTGATATGCCTCCCTCTGAATTCAGAAAGTTTCTTCAAACTGTTGCTACTGATTATCACGGAGATACATATCATCTTATTTCCAAGAACTGTAATCATTTTACGGATGATGTCTCGTGCAGATTGACTGGGAAAAGGATACCTGGTTGGGTTAATCGCCTTGCTCGGATGGGTAACACTTTTCTCAATTCACTGAACTTTCATCGTTTACTTCCTTTGCATTCATCTTTTAATTGAATTCCTTTTGTCATTATAGTATGACATATAGCCATCCGTTACGTTGATGCCATTTGATTGTGGAGGAAAACCTCCTTTGCTAAAAAAGCCACTTCTTTATACATTCATATGACATCTTTAATAAAAACTTCTAGTTTCTGCTTTATAGAAGGCGTGAGATCCCACATCGGTTGGAAAGAAGAACGAAACACGCTTTATAAGGGTGTGGAAAACTCTCCCTAGCAGATACGTTTTAAAAACCTTGAGGGAAAACTCGAAAGGAATAGTCCAAAGAGGACAATATTTGCTAGCGGTGGACTTGGGCGGTTGCAGAAGGTGTCTACGACTCTGGTTCAATTGATTTTCCTTACAAATGTTAAAAACGAAAAATATGTGTTGGGAGAAATGCTATGTGCTTTGTTTTGACAATACCTTACATTGCAAGCTGTAACTCCAATGATGATGGTTTGTTACACTCCATTGATGCATTATCAGTCTTTACTGTGATGAAAATATAACAATGAATGATGTTAGTTTACTCTTATAACATTTACTCAAGAACATCTGATGCGCATGGATGTTGTCAGTTTGATGTCGAGCTCGGTCTCTGCATGCATTTGCACGCGTAAAAGTGAATTCTGCTAACTTCTTTTTCTGGTGAAAACTTCAGGTGTTTTGTGCAGCTGTTTACTACCTGAAAGCCTTCAATCTACTACTGTCAAACAATTGCCCGAGCCCCGCGAATACTCAGGTTTGTCGTCTTTCACTTGAATGTCGTTGCCTTCTTGAATTGATTTCAAACATGGGATCTGATCAAATACGTATGTAGTTAAAACTTGAATCCAACGAAGTATGCGGTTAATAGCATTACCATTTGGGGTTTGTTTCCTCCAGAGGAAGAATGTACCTCCGAGCCTCTGTCACTCAACACTCAGCAAGTCCCGGCAGAAATCGACAACGACGAAGAGAAGCGACTGCTGACACCCTCGACCGGAGTTACTGATGTTGCTTTTGTCGAAGAATCTCACAAGTGAGAGCAGGCAGTCAGTCTTTTCTATTGCTAACAAATCTCATCCCATGCAAACTATGATCTTGTCTCCGTTGCAAAAGTAAAAACTGTAAGCCTTCTTTGTATTAGACATTTTGAAATAGAATGTTGTTTTTGTTAAGTAGCTATTGTTACTTTAGACCTTTAATTGAGTCACAAGAACATTAGATATCAATTTGAATGTCGTTTTATAATGACAATCTTGC AATCAGATGTCATGTTGAAAAGACAGCATTTTGAGACCAAAAATGGAAATGGTATTTGGGTGGGCAGCAAATCGAACGTTCCGTTTATCCTCTTCTCGATGCCAAATTTATATTATGCATTCTTTCTGTTCATCATTCGTCGAAATTCGTTAGCCTTTTCCTTTTCCCGTCTCGCCGGAGATCGACTTCTTTTCTTTGATGCATGTTTTTTCTCCGATGGGCAGAGAAGAATAAGGCAAAGGAAAACTGAAAGAAAATAGCTTTCTTTTCTAGGTTTTCCAAATTTTGATTCATTTTGGGAACGTTCAGGGATATACATATTCTAGCTAGACATTTTTTGGAGATGGGAGCAGAGAGCACCTCGAAAACGACCCCCGAAAGTGGAGATAGGAACGATAAGAAGAAGACCCAGGTGGTGTTGAACGTTTATGATCTCACCCCTGCCAACAATTATTCCTATTGGTTTGGTTTTGGGGTTTTCCATTCGGGTATTGAAGTCCATGGCAAAGAGTATGGGTTTGGAGGTCATGACTTCCCCGCTAGTGGAGTTTTTGAAGTAGAACCAAGGAGCTGTCCAGGCTTTATATACCGATGTTCTGTCACGTTGGGACATGCTGATATGCCTCCCTCTGAATTCAGAAAGTTTCTTCAAACTGTTGCTACTGATTATCACGGAGATACATATCATCTTATTTCCAAGAACTGTAATCATTTTACGGATGATGTCTCGTGCAGATTGACTGGGAAAAGGATACCTGGTTGGGTTAATCGCCTTGCTCGGATGGGTGTTTTGTGCAGCTGTTTACTACCTGAAAGCCTTCAATCTACTACTGTCAAACAATTGCCCGAGCCCCGCGAATACTCAGAGGAAGAATGTACCTCCGAGCCTCTGTCACTCAACACTCAGCAAGTCCCGGCAGAAATCGACAACGACGAAGAGAAGCGACTGCTGACACCCTCGACCGGAGTTACTGATGTTGCTTTTGTCGAAGAATCTCACAAGTGAGAGCAGGCAGTCAGTCTTTTCTATTGCTAACAAATCTCATCCCATGCAAACTATGATCTTGTCTCCGTTGCAAAAGTAAAAACTGTAAGCCTTCTTTGTATTAGACATTTTGAAATAGAATGTTGTTTTTGTTAAGTAGCTATTGTTACTTTAGACCTTTAATTGAGTCACAAGAACATTAGATATCAATTTGAATGTCGTTTTATAATGACAATCTTGC ATGGGAGCAGAGAGCACCTCGAAAACGACCCCCGAAAGTGGAGATAGGAACGATAAGAAGAAGACCCAGGTGGTGTTGAACGTTTATGATCTCACCCCTGCCAACAATTATTCCTATTGGTTTGGTTTTGGGGTTTTCCATTCGGGTATTGAAGTCCATGGCAAAGAGTATGGGTTTGGAGGTCATGACTTCCCCGCTAGTGGAGTTTTTGAAGTAGAACCAAGGAGCTGTCCAGGCTTTATATACCGATGTTCTGTCACGTTGGGACATGCTGATATGCCTCCCTCTGAATTCAGAAAGTTTCTTCAAACTGTTGCTACTGATTATCACGGAGATACATATCATCTTATTTCCAAGAACTGTAATCATTTTACGGATGATGTCTCGTGCAGATTGACTGGGAAAAGGATACCTGGTTGGGTTAATCGCCTTGCTCGGATGGGTGTTTTGTGCAGCTGTTTACTACCTGAAAGCCTTCAATCTACTACTGTCAAACAATTGCCCGAGCCCCGCGAATACTCAGAGGAAGAATGTACCTCCGAGCCTCTGTCACTCAACACTCAGCAAGTCCCGGCAGAAATCGACAACGACGAAGAGAAGCGACTGCTGACACCCTCGACCGGAGTTACTGATGTTGCTTTTGTCGAAGAATCTCACAAGTGA MGAESTSKTTPESGDRNDKKKTQVVLNVYDLTPANNYSYWFGFGVFHSGIEVHGKEYGFGGHDFPASGVFEVEPRSCPGFIYRCSVTLGHADMPPSEFRKFLQTVATDYHGDTYHLISKNCNHFTDDVSCRLTGKRIPGWVNRLARMGVLCSCLLPESLQSTTVKQLPEPREYSEEECTSEPLSLNTQQVPAEIDNDEEKRLLTPSTGVTDVAFVEESHK
BLAST of CmaCh10G005670 vs. Swiss-Prot
Match: PPDEX_ARATH (DeSI-like protein At4g17486 OS=Arabidopsis thaliana GN=At4g17486 PE=2 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 9.9e-59 Identity = 106/183 (57.92%), Postives = 134/183 (73.22%), Query Frame = 1
BLAST of CmaCh10G005670 vs. Swiss-Prot
Match: DESI2_MOUSE (Desumoylating isopeptidase 2 OS=Mus musculus GN=Desi2 PE=1 SV=1) HSP 1 Score: 132.9 bits (333), Expect = 4.3e-30 Identity = 70/174 (40.23%), Postives = 102/174 (58.62%), Query Frame = 1
BLAST of CmaCh10G005670 vs. Swiss-Prot
Match: DESI2_HUMAN (Desumoylating isopeptidase 2 OS=Homo sapiens GN=DESI2 PE=1 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 5.7e-30 Identity = 70/170 (41.18%), Postives = 100/170 (58.82%), Query Frame = 1
BLAST of CmaCh10G005670 vs. Swiss-Prot
Match: DESI2_PIG (Desumoylating isopeptidase 2 OS=Sus scrofa GN=DESI2 PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 5.7e-30 Identity = 70/170 (41.18%), Postives = 100/170 (58.82%), Query Frame = 1
BLAST of CmaCh10G005670 vs. Swiss-Prot
Match: DESI2_PONAB (Desumoylating isopeptidase 2 OS=Pongo abelii GN=DESI2 PE=2 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 5.7e-30 Identity = 70/170 (41.18%), Postives = 100/170 (58.82%), Query Frame = 1
BLAST of CmaCh10G005670 vs. TrEMBL
Match: A0A0A0LWD7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G305770 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 3.1e-107 Identity = 186/219 (84.93%), Postives = 202/219 (92.24%), Query Frame = 1
BLAST of CmaCh10G005670 vs. TrEMBL
Match: B9N5J0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s06590g PE=4 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 2.8e-84 Identity = 153/221 (69.23%), Postives = 178/221 (80.54%), Query Frame = 1
BLAST of CmaCh10G005670 vs. TrEMBL
Match: A0A067KKM3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13289 PE=4 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 1.1e-83 Identity = 150/221 (67.87%), Postives = 182/221 (82.35%), Query Frame = 1
BLAST of CmaCh10G005670 vs. TrEMBL
Match: B9SEM6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0220620 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 4.4e-82 Identity = 151/221 (68.33%), Postives = 179/221 (81.00%), Query Frame = 1
BLAST of CmaCh10G005670 vs. TrEMBL
Match: A0A059CMV2_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_C01120 PE=4 SV=1) HSP 1 Score: 303.1 bits (775), Expect = 2.7e-79 Identity = 149/221 (67.42%), Postives = 174/221 (78.73%), Query Frame = 1
BLAST of CmaCh10G005670 vs. TAIR10
Match: AT4G17486.1 (AT4G17486.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 228.0 bits (580), Expect = 5.6e-60 Identity = 106/183 (57.92%), Postives = 134/183 (73.22%), Query Frame = 1
BLAST of CmaCh10G005670 vs. TAIR10
Match: AT5G47310.1 (AT5G47310.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 225.7 bits (574), Expect = 2.8e-59 Identity = 102/196 (52.04%), Postives = 142/196 (72.45%), Query Frame = 1
BLAST of CmaCh10G005670 vs. TAIR10
Match: AT1G47740.1 (AT1G47740.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 199.5 bits (506), Expect = 2.1e-51 Identity = 88/156 (56.41%), Postives = 115/156 (73.72%), Query Frame = 1
BLAST of CmaCh10G005670 vs. TAIR10
Match: AT5G25170.1 (AT5G25170.1 PPPDE putative thiol peptidase family protein) HSP 1 Score: 197.6 bits (501), Expect = 8.1e-51 Identity = 83/160 (51.88%), Postives = 111/160 (69.38%), Query Frame = 1
BLAST of CmaCh10G005670 vs. TAIR10
Match: AT4G31980.1 (AT4G31980.1 unknown protein) HSP 1 Score: 191.4 bits (485), Expect = 5.8e-49 Identity = 80/144 (55.56%), Postives = 107/144 (74.31%), Query Frame = 1
BLAST of CmaCh10G005670 vs. NCBI nr
Match: gi|659130129|ref|XP_008465014.1| (PREDICTED: deSI-like protein At4g17486 [Cucumis melo]) HSP 1 Score: 397.9 bits (1021), Expect = 1.2e-107 Identity = 187/219 (85.39%), Postives = 203/219 (92.69%), Query Frame = 1
BLAST of CmaCh10G005670 vs. NCBI nr
Match: gi|449464592|ref|XP_004150013.1| (PREDICTED: deSI-like protein At4g17486 isoform X1 [Cucumis sativus]) HSP 1 Score: 396.0 bits (1016), Expect = 4.4e-107 Identity = 186/219 (84.93%), Postives = 202/219 (92.24%), Query Frame = 1
BLAST of CmaCh10G005670 vs. NCBI nr
Match: gi|778660433|ref|XP_011656242.1| (PREDICTED: deSI-like protein At4g17486 isoform X2 [Cucumis sativus]) HSP 1 Score: 335.9 bits (860), Expect = 5.4e-89 Identity = 154/174 (88.51%), Postives = 163/174 (93.68%), Query Frame = 1
BLAST of CmaCh10G005670 vs. NCBI nr
Match: gi|743929297|ref|XP_011008877.1| (PREDICTED: deSI-like protein At4g17486 [Populus euphratica]) HSP 1 Score: 321.6 bits (823), Expect = 1.0e-84 Identity = 154/221 (69.68%), Postives = 177/221 (80.09%), Query Frame = 1
BLAST of CmaCh10G005670 vs. NCBI nr
Match: gi|566214560|ref|XP_006371946.1| (hypothetical protein POPTR_0018s06590g [Populus trichocarpa]) HSP 1 Score: 319.7 bits (818), Expect = 4.0e-84 Identity = 153/221 (69.23%), Postives = 178/221 (80.54%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |