CmaCh10G003850 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCCCTTCTTCTAAATTGGCCCTTCCTAAAACCCTTCGACCTGAAACTAATTTACAGTGGTTGCAGAGATTCTCCGTTTATGGAGCAAATGAGTGGAAGGGGAGAAGAAGGGTTGACTTTGATTGTGAGGAAACCGTGTTTCAATTTGCCCACTGGATGCCCAGATTGCTTGCCGGTTTATATCTATCTAAAATTGGCCAATCTCCATTTCCACTTGGATTTCAATCTCATCTACCCCGAGTCTGGTAATCTCCCATGTCTATGCTCTAATTCCTTCCTTCTTTTTTGTTGTTTCATATGTGTAGTTATTTTCACTACTGATTTCATGGCTGGTGGTGTATAGACTGGTAAAGGATTTAGATTCCTTTTCCATTTCCAGTGAATTAACAAGTATGGCATCTGTTTTTCTCTGGCAGATATAATTCCTTATGTTGAAACTGGTACCTATGTAGCGTACAATAACGAGAGGGGTGGGGTCATTGAGTGTTTAAGACAGGATGGTATTCTTGATCTCGACACCGAGTTTCTCTCGGTTCCGGAATGGGTATCTGCAAAATCTATGGTTAGTTCATGGCTTGCAGATGCAGTCATGTATGAGCTTTGGTTGGGAACTGATGGTGGTTCTGCTCAAAGGGTCTATTATTCTGATCTTCCCTGGCCGATTGGAAAGGTTCTGTATTTTAAGAAAGTACACTTTGTGAAGCTCCAACTTGGGATTGACAAAGAAAATGCTGAGCGAAGAGAAGAACAGGTTATAAATCTTCTTTTTCTTACTACTTGGACATTAACTCAATTGGTAGATAGTGATCGATGAAGGACTCTTTCAAATTTGTCCCCTGTTTCTTGATATTGCGAATTGAGTTCATTTCTTGGCTGACAGATTTATAGAAATGCAAATCTTGCTTATGGAGCTTTGTCAACTAGATTAGGAGAGCAGAATTTTTTATTTGAGAACAGGTGAATCTCTTGTTGTATATTATATACTTCTTTAACCATCCTAATAATTTGATAATGCATCACCTTGTTATATTGTAGGCCTTCAAGTTTGGATGCACTTGTTCTAGGGCATCTACTATTCACTCTTCAAGTACTACCGGTGAGTTATTTTCAGATCATTCTTCAGTTGTTGTAGGTGAATGTTTCTTATTCTTTTGAAATGTTAATTGTTCAGTAATAGTAGCTCTCTTATCTTAAGAGAAATGTAGGTCATAAGAACAATTATTTGCAGTTTTTCATATGTTTTTTTCCATCTAATCGACTTCCGTATCTTGATCTTGATTTCCGATAACATCTTTATATCGATGGATCCTTAGCATATCTTGAGATACAGTTATTGTTATTACTTTTAAGAAGTAATAACATGTTTTTCAATGATCATCTTACGAAGTTATACAATATATAATATGCTTATAAATCATGAAGTGATTTCTTATAGTTAAGGTGCCGGAATTTTTCTTTCCTACTTTTGAATCTTGTCTTTCCCCAATTAACCGTTTTATCCATTGAAAAATATAACAATAAATCGATATCTTACTGCATTAATTTCCACCCACATTTTATTAAAATATCCTGCTTAACGGACCTTGATCTTTGTATGATAGACAGTACATTATTCCAAACATTGCTTTCTTTATTTCTTTCTTTCTTCTCAACTTAAATGAAGTTCTTACTCTGGGCCTTGTTGGTATTCTCTACTTTGTAGGAAACGTCAGTGCTTCGCAGTAAGCTTTTAGAGCATAGTAACCTCGTACGATATGCTGAGAAATATATGACAGAGTTGATAGATGTTGGTACTTCATCGTTACCATCATCTTCTTCTGCGCGTTCCAGTTCAGGGGCTTCATCATCAGCACCAAGAAGGGGTCCTTATAACTGGAGTAAGATATTTTATACTTGCTATCAAATGTTTTCTTTTTTACACTTGATGAAATTAGTTTATTGAACGAGGGCCATGATGTTATGTTGCTAATGCATTTCAAATAGTCCTAATTCCTTAATTTGTTTGCTAGAGGTACTCTATGATCTTCTTTTGTTCATCCATTATTGTAAATATTTGGTATTATACTTATGTTCATCATCTCTGTTGTTCCTGATGTTTCTATCCCTTCTCTTTCTTCCTTTGTGGCGAGAATTGTACTGTGGAATGAAGATAGTTCCATATATTTTGTGAATCCTTTTTTTCCACTCGTCTACGACGATATATCACCGAGCACATTGTATCCGTTCACTAGTCTAAATTCAGTCCTATTGAATGGGCACCATACTCTTCTTAGGATGATGAGCTGTGATTTTGGGTGCTCTTCTTTTTTTTCAACATATGAAATCCATCCAGTCGTTGATTTCTGTGGTCTTGAAAATCCTTTTAGTTTTTCTTTGGATAATTGGAAGATCATTTCTATTCCAAGTTTCTAGGCATTGAATGCCTAACAAAGTGAAATTACAATGTGACTTTACTTTCAAATGCACTAAGATAAGATTGGAAATCTATTATTTTCTCAATATATTTGTTGCATCATTCATCAGGCTCAAAGCCGAAGAGCAAGCAGAAGAAAGAAAAGACGAAAGAGGAGAAAACATTCAAAAGGAGAGGCAAGTATTTTGTAGGCGCACAGGTGGTGGCAGTTCTACTGTTTCTGACCCTGATGGGCAGGGGTGATGATGCTGAAGTGGAGCTGGATGACGATGAAGGGTATGATTATAGTGAATGAAGAGTTCTTCAATTTCTACATTTTTGGAAGTGATGACAAAGCCACTAGCTTTTACTTTCACCAAACATTTTTTAAATGGAAGAGAAGTTTGCCTTTCTTTGAAATTTTGAAGAGCTCTTCTGATAGTTTGCTGGATTCTTCTAAACAACTGTTTTCATTACTTGATTCTATTTGTCAAGATGCCAAGAACATTGCCAAATTTACTACAGCAAATCTTGCTCGAGTGGGCTATTGGGCCTAATCGTAAGAAACGTTTTTCGTTTCATCTGTATAGTTCCACGAAAATGTATTTATTATAATTATTTTGACTGCTATCGTGTCGTATCTCTACCGTCGAAATTACAGGATAAGTAGATATAACTTATAATTCATTCATTTTTTTT GCCCCTTCTTCTAAATTGGCCCTTCCTAAAACCCTTCGACCTGAAACTAATTTACAGTGGTTGCAGAGATTCTCCGTTTATGGAGCAAATGAGTGGAAGGGGAGAAGAAGGGTTGACTTTGATTGTGAGGAAACCGTGTTTCAATTTGCCCACTGGATGCCCAGATTGCTTGCCGGTTTATATCTATCTAAAATTGGCCAATCTCCATTTCCACTTGGATTTCAATCTCATCTACCCCGAGTCTGATATAATTCCTTATGTTGAAACTGGTACCTATGTAGCGTACAATAACGAGAGGGGTGGGGTCATTGAGTGTTTAAGACAGGATGGTATTCTTGATCTCGACACCGAGTTTCTCTCGGTTCCGGAATGGGTATCTGCAAAATCTATGGTTAGTTCATGGCTTGCAGATGCAGTCATGTATGAGCTTTGGTTGGGAACTGATGGTGGTTCTGCTCAAAGGGTCTATTATTCTGATCTTCCCTGGCCGATTGGAAAGGTTCTGTATTTTAAGAAAGTACACTTTGTGAAGCTCCAACTTGGGATTGACAAAGAAAATGCTGAGCGAAGAGAAGAACAGATTTATAGAAATGCAAATCTTGCTTATGGAGCTTTGTCAACTAGATTAGGAGAGCAGAATTTTTTATTTGAGAACAGGCCTTCAAGTTTGGATGCACTTGTTCTAGGGCATCTACTATTCACTCTTCAAGTACTACCGGAAACGTCAGTGCTTCGCAGTAAGCTTTTAGAGCATAGTAACCTCGTACGATATGCTGAGAAATATATGACAGAGTTGATAGATGTTGGTACTTCATCGTTACCATCATCTTCTTCTGCGCGTTCCAGTTCAGGGGCTTCATCATCAGCACCAAGAAGGGGTCCTTATAACTGGAGCTCAAAGCCGAAGAGCAAGCAGAAGAAAGAAAAGACGAAAGAGGAGAAAACATTCAAAAGGAGAGGCAAGTATTTTGTAGGCGCACAGGTGGTGGCAGTTCTACTGTTTCTGACCCTGATGGGCAGGGGTGATGATGCTGAAGTGGAGCTGGATGACGATGAAGGGTATGATTATAGTGAATGAAGAGTTCTTCAATTTCTACATTTTTGGAAGTGATGACAAAGCCACTAGCTTTTACTTTCACCAAACATTTTTTAAATGGAAGAGAAGTTTGCCTTTCTTTGAAATTTTGAAGAGCTCTTCTGATAGTTTGCTGGATTCTTCTAAACAACTGTTTTCATTACTTGATTCTATTTGTCAAGATGCCAAGAACATTGCCAAATTTACTACAGCAAATCTTGCTCGAGTGGGCTATTGGGCCTAATCGTAAGAAACGTTTTTCGTTTCATCTGTATAGTTCCACGAAAATGTATTTATTATAATTATTTTGACTGCTATCGTGTCGTATCTCTACCGTCGAAATTACAGGATAAGTAGATATAACTTATAATTCATTCATTTTTTTT ATGGAGCAAATGAGTGGAAGGGGAGAAGAAGGGTTGACTTTGATTGTGAGGAAACCGTGTTTCAATTTGCCCACTGGATGCCCAGATTGCTTGCCGGTTTATATCTATCTAAAATTGGCCAATCTCCATTTCCACTTGGATTTCAATCTCATCTACCCCGAGTCTGATATAATTCCTTATGTTGAAACTGGTACCTATGTAGCGTACAATAACGAGAGGGGTGGGGTCATTGAGTGTTTAAGACAGGATGGTATTCTTGATCTCGACACCGAGTTTCTCTCGGTTCCGGAATGGGTATCTGCAAAATCTATGGTTAGTTCATGGCTTGCAGATGCAGTCATGTATGAGCTTTGGTTGGGAACTGATGGTGGTTCTGCTCAAAGGGTCTATTATTCTGATCTTCCCTGGCCGATTGGAAAGGTTCTGTATTTTAAGAAAGTACACTTTGTGAAGCTCCAACTTGGGATTGACAAAGAAAATGCTGAGCGAAGAGAAGAACAGATTTATAGAAATGCAAATCTTGCTTATGGAGCTTTGTCAACTAGATTAGGAGAGCAGAATTTTTTATTTGAGAACAGGCCTTCAAGTTTGGATGCACTTGTTCTAGGGCATCTACTATTCACTCTTCAAGTACTACCGGAAACGTCAGTGCTTCGCAGTAAGCTTTTAGAGCATAGTAACCTCGTACGATATGCTGAGAAATATATGACAGAGTTGATAGATGTTGGTACTTCATCGTTACCATCATCTTCTTCTGCGCGTTCCAGTTCAGGGGCTTCATCATCAGCACCAAGAAGGGGTCCTTATAACTGGAGCTCAAAGCCGAAGAGCAAGCAGAAGAAAGAAAAGACGAAAGAGGAGAAAACATTCAAAAGGAGAGGCAAGTATTTTGTAGGCGCACAGGTGGTGGCAGTTCTACTGTTTCTGACCCTGATGGGCAGGGGTGATGATGCTGAAGTGGAGCTGGATGACGATGAAGGGTATGATTATAGTGAATGA MEQMSGRGEEGLTLIVRKPCFNLPTGCPDCLPVYIYLKLANLHFHLDFNLIYPESDIIPYVETGTYVAYNNERGGVIECLRQDGILDLDTEFLSVPEWVSAKSMVSSWLADAVMYELWLGTDGGSAQRVYYSDLPWPIGKVLYFKKVHFVKLQLGIDKENAERREEQIYRNANLAYGALSTRLGEQNFLFENRPSSLDALVLGHLLFTLQVLPETSVLRSKLLEHSNLVRYAEKYMTELIDVGTSSLPSSSSARSSSGASSSAPRRGPYNWSSKPKSKQKKEKTKEEKTFKRRGKYFVGAQVVAVLLFLTLMGRGDDAEVELDDDEGYDYSE
BLAST of CmaCh10G003850 vs. Swiss-Prot
Match: MTX_ARATH (Mitochondrial outer membrane import complex protein METAXIN OS=Arabidopsis thaliana GN=MTX1 PE=1 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 9.9e-95 Identity = 176/314 (56.05%), Postives = 237/314 (75.48%), Query Frame = 1
BLAST of CmaCh10G003850 vs. Swiss-Prot
Match: MTX2_HUMAN (Metaxin-2 OS=Homo sapiens GN=MTX2 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 3.0e-11 Identity = 59/213 (27.70%), Postives = 97/213 (45.54%), Query Frame = 1
BLAST of CmaCh10G003850 vs. Swiss-Prot
Match: MTX2_PIG (Metaxin-2 OS=Sus scrofa GN=MTX2 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 2.0e-10 Identity = 64/227 (28.19%), Postives = 105/227 (46.26%), Query Frame = 1
BLAST of CmaCh10G003850 vs. Swiss-Prot
Match: MTX2_MOUSE (Metaxin-2 OS=Mus musculus GN=Mtx2 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.6e-10 Identity = 50/181 (27.62%), Postives = 86/181 (47.51%), Query Frame = 1
BLAST of CmaCh10G003850 vs. Swiss-Prot
Match: MTX1_MOUSE (Metaxin-1 OS=Mus musculus GN=Mtx1 PE=1 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 5.4e-08 Identity = 61/223 (27.35%), Postives = 100/223 (44.84%), Query Frame = 1
BLAST of CmaCh10G003850 vs. TrEMBL
Match: A0A0A0LU72_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423330 PE=4 SV=1) HSP 1 Score: 592.0 bits (1525), Expect = 4.4e-166 Identity = 296/330 (89.70%), Postives = 313/330 (94.85%), Query Frame = 1
BLAST of CmaCh10G003850 vs. TrEMBL
Match: A0A061GQ31_THECC (Metaxin-related isoform 1 OS=Theobroma cacao GN=TCM_039342 PE=4 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 6.6e-122 Identity = 225/331 (67.98%), Postives = 270/331 (81.57%), Query Frame = 1
BLAST of CmaCh10G003850 vs. TrEMBL
Match: M5WGC9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008927mg PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 1.8e-119 Identity = 215/320 (67.19%), Postives = 260/320 (81.25%), Query Frame = 1
BLAST of CmaCh10G003850 vs. TrEMBL
Match: A0A0D2RSD4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G025600 PE=4 SV=1) HSP 1 Score: 431.8 bits (1109), Expect = 7.6e-118 Identity = 217/333 (65.17%), Postives = 269/333 (80.78%), Query Frame = 1
BLAST of CmaCh10G003850 vs. TrEMBL
Match: M1AFY1_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008514 PE=4 SV=1) HSP 1 Score: 431.0 bits (1107), Expect = 1.3e-117 Identity = 221/331 (66.77%), Postives = 264/331 (79.76%), Query Frame = 1
BLAST of CmaCh10G003850 vs. TAIR10
Match: AT2G19080.1 (AT2G19080.1 metaxin-related) HSP 1 Score: 348.2 bits (892), Expect = 5.6e-96 Identity = 176/314 (56.05%), Postives = 237/314 (75.48%), Query Frame = 1
BLAST of CmaCh10G003850 vs. NCBI nr
Match: gi|659107230|ref|XP_008453583.1| (PREDICTED: mitochondrial outer membrane import complex protein METAXIN isoform X1 [Cucumis melo]) HSP 1 Score: 595.5 bits (1534), Expect = 5.7e-167 Identity = 297/330 (90.00%), Postives = 314/330 (95.15%), Query Frame = 1
BLAST of CmaCh10G003850 vs. NCBI nr
Match: gi|449457187|ref|XP_004146330.1| (PREDICTED: mitochondrial outer membrane import complex protein METAXIN isoform X1 [Cucumis sativus]) HSP 1 Score: 592.0 bits (1525), Expect = 6.3e-166 Identity = 296/330 (89.70%), Postives = 313/330 (94.85%), Query Frame = 1
BLAST of CmaCh10G003850 vs. NCBI nr
Match: gi|1009105684|ref|XP_015885676.1| (PREDICTED: mitochondrial outer membrane import complex protein METAXIN [Ziziphus jujuba]) HSP 1 Score: 451.8 bits (1161), Expect = 1.0e-123 Identity = 225/326 (69.02%), Postives = 266/326 (81.60%), Query Frame = 1
BLAST of CmaCh10G003850 vs. NCBI nr
Match: gi|645234395|ref|XP_008223791.1| (PREDICTED: mitochondrial outer membrane import complex protein METAXIN [Prunus mume]) HSP 1 Score: 445.7 bits (1145), Expect = 7.3e-122 Identity = 217/320 (67.81%), Postives = 261/320 (81.56%), Query Frame = 1
BLAST of CmaCh10G003850 vs. NCBI nr
Match: gi|590581453|ref|XP_007014351.1| (Metaxin-related isoform 1 [Theobroma cacao]) HSP 1 Score: 445.3 bits (1144), Expect = 9.5e-122 Identity = 225/331 (67.98%), Postives = 270/331 (81.57%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |