CmaCh10G003170 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh10G003170
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	MATE efflux family protein
Location	Cma_Chr10 : 1445211 .. 1445453 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATGGCTAGTGCATTGGATACCTTATGTGGGCAGTCATTCGGCGCAAAGCGATATCATATGCTAGGACTACATACTCAATGTGCAATGTTCGTCCTCTTAGTTGTCAGCATATTTCTTGTCATTATTACATCAAACACCAAAATGATTCTAATTGCATTGCACCAAGATCAGGACATCTCCAAAGGAGCTGGATTATACGCCCGTTACATGATCCCGAGCGTTGTCGCATACGGTTAG

mRNA sequence

ATGGGTATGGCTAGTGCATTGGATACCTTATGTGGGCAGTCATTCGGCGCAAAGCGATATCATATGCTAGGACTACATACTCAATGTGCAATGTTCGTCCTCTTAGTTGTCAGCATATTTCTTGTCATTATTACATCAAACACCAAAATGATTCTAATTGCATTGCACCAAGATCAGGACATCTCCAAAGGAGCTGGATTATACGCCCGTTACATGATCCCGAGCGTTGTCGCATACGGTTAG

Coding sequence (CDS)

ATGGGTATGGCTAGTGCATTGGATACCTTATGTGGGCAGTCATTCGGCGCAAAGCGATATCATATGCTAGGACTACATACTCAATGTGCAATGTTCGTCCTCTTAGTTGTCAGCATATTTCTTGTCATTATTACATCAAACACCAAAATGATTCTAATTGCATTGCACCAAGATCAGGACATCTCCAAAGGAGCTGGATTATACGCCCGTTACATGATCCCGAGCGTTGTCGCATACGGTTAG

Protein sequence

MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQDISKGAGLYARYMIPSVVAYG

Homology

[Close]

BLAST of CmaCh10G003170 vs. Swiss-Prot
Match: DTX17_ARATH (Protein DETOXIFICATION 17 OS=Arabidopsis thaliana GN=DTX17 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-18
Identity = 47/80 (58.75%), Postives = 63/80 (78.75%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +G ASAL+TLCGQ++GAK Y  LG+  Q AMFVLL++S+ L II +NT+ IL+ +HQD+ 
Sbjct: 80  LGTASALETLCGQAYGAKLYGKLGIQMQRAMFVLLILSVPLSIIWANTEQILVLVHQDKS 139

Query: 61  ISKGAGLYARYMIPSVVAYG 81
           I+  AG YA+YMIPS+ AYG
Sbjct: 140 IASVAGSYAKYMIPSLFAYG 159

[Close]

BLAST of CmaCh10G003170 vs. Swiss-Prot
Match: DTX16_ARATH (Protein DETOXIFICATION 16 OS=Arabidopsis thaliana GN=DTX16 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.8e-17
Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           MG ASALDTLCGQ++GAK+Y MLG+  Q AMFVL + SI L II +NT+ +L+   Q++ 
Sbjct: 82  MGTASALDTLCGQAYGAKKYGMLGIQMQRAMFVLTLASIPLSIIWANTEHLLVFFGQNKS 141

Query: 61  ISKGAGLYARYMIPSVVAYG 81
           I+  AG YA++MIPS+ AYG
Sbjct: 142 IATLAGSYAKFMIPSIFAYG 161

[Close]

BLAST of CmaCh10G003170 vs. Swiss-Prot
Match: DTX15_ARATH (Protein DETOXIFICATION 15 OS=Arabidopsis thaliana GN=DTX15 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 6.4e-16
Identity = 43/80 (53.75%), Postives = 59/80 (73.75%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           MG ASA+DT+CGQS+GAK Y MLG+  Q AM VL ++S+ L I+ +NT+  L+   QD+ 
Sbjct: 83  MGTASAMDTVCGQSYGAKMYGMLGIQMQRAMLVLTLLSVPLSIVWANTEHFLVFFGQDKS 142

Query: 61  ISKGAGLYARYMIPSVVAYG 81
           I+  +G YAR+MIPS+ AYG
Sbjct: 143 IAHLSGSYARFMIPSIFAYG 162

[Close]

BLAST of CmaCh10G003170 vs. Swiss-Prot
Match: DTX18_ARATH (Protein DETOXIFICATION 18 OS=Arabidopsis thaliana GN=DTX18 PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.5e-14
Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 1


Query: 2   GMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQDI 61
           G++ AL+TLCGQ FGAK Y MLG+H Q +  V LV +I + I+   T+ + + L QD  I
Sbjct: 88  GLSGALETLCGQGFGAKSYRMLGIHLQSSCIVSLVFTILITILWFFTESVFLLLRQDPSI 147

Query: 62  SKGAGLYARYMIPSVVAYG 81
           SK A LY +Y+ P ++AYG
Sbjct: 148 SKQAALYMKYLAPGLLAYG 166

[Close]

BLAST of CmaCh10G003170 vs. Swiss-Prot
Match: DTX19_ARATH (Protein DETOXIFICATION 19 OS=Arabidopsis thaliana GN=DTX19 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 7.8e-14
Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +G++ +L+TLCGQ FGAKRY MLG+H Q +  V LV SI + I    T+ I   L QD  
Sbjct: 95  VGLSGSLETLCGQGFGAKRYRMLGVHLQSSCIVSLVFSILITIFWFFTESIFGLLRQDPS 154

Query: 61  ISKGAGLYARYMIPSVVAYG 81
           ISK A LY +Y  P ++AYG
Sbjct: 155 ISKQAALYMKYQAPGLLAYG 174

[Close]

BLAST of CmaCh10G003170 vs. TrEMBL
Match: A0A067F632_CITSI (Protein DETOXIFICATION OS=Citrus sinensis GN=CISIN_1g010345mg PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-21
Identity = 51/79 (64.56%), Postives = 68/79 (86.08%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +G++SAL+TLCGQS+GAK+YHMLG+H Q  MFVLL++S+ L +I +NT+ +L+A HQD +
Sbjct: 94  VGLSSALETLCGQSYGAKQYHMLGIHMQRGMFVLLLISVPLALIWANTESLLVAAHQDSE 153

Query: 61  ISKGAGLYARYMIPSVVAY 80
           ISK AGLYARYMIPS+ AY
Sbjct: 154 ISKEAGLYARYMIPSIFAY 172

[Close]

BLAST of CmaCh10G003170 vs. TrEMBL
Match: V4UR20_9ROSI (Protein DETOXIFICATION OS=Citrus clementina GN=CICLE_v10008114mg PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-21
Identity = 51/79 (64.56%), Postives = 68/79 (86.08%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +G++SAL+TLCGQS+GAK+YHMLG+H Q  MFVLL++S+ L +I +NT+ +L+A HQD +
Sbjct: 94  VGLSSALETLCGQSYGAKQYHMLGIHMQRGMFVLLLISVPLALIWANTESLLVAAHQDSE 153

Query: 61  ISKGAGLYARYMIPSVVAY 80
           ISK AGLYARYMIPS+ AY
Sbjct: 154 ISKEAGLYARYMIPSIFAY 172

[Close]

BLAST of CmaCh10G003170 vs. TrEMBL
Match: A0A067F9N3_CITSI (Protein DETOXIFICATION OS=Citrus sinensis GN=CISIN_1g010345mg PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-21
Identity = 51/79 (64.56%), Postives = 68/79 (86.08%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +G++SAL+TLCGQS+GAK+YHMLG+H Q  MFVLL++S+ L +I +NT+ +L+A HQD +
Sbjct: 94  VGLSSALETLCGQSYGAKQYHMLGIHMQRGMFVLLLISVPLALIWANTESLLVAAHQDSE 153

Query: 61  ISKGAGLYARYMIPSVVAY 80
           ISK AGLYARYMIPS+ AY
Sbjct: 154 ISKEAGLYARYMIPSIFAY 172

[Close]

BLAST of CmaCh10G003170 vs. TrEMBL
Match: A0A067F671_CITSI (Protein DETOXIFICATION OS=Citrus sinensis GN=CISIN_1g010345mg PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 2.7e-21
Identity = 51/79 (64.56%), Postives = 68/79 (86.08%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +G++SAL+TLCGQS+GAK+YHMLG+H Q  MFVLL++S+ L +I +NT+ +L+A HQD +
Sbjct: 94  VGLSSALETLCGQSYGAKQYHMLGIHMQRGMFVLLLISVPLALIWANTESLLVAAHQDSE 153

Query: 61  ISKGAGLYARYMIPSVVAY 80
           ISK AGLYARYMIPS+ AY
Sbjct: 154 ISKEAGLYARYMIPSIFAY 172

[Close]

BLAST of CmaCh10G003170 vs. TrEMBL
Match: W1PCG4_AMBTC (Protein DETOXIFICATION OS=Amborella trichopoda GN=AMTR_s00006p00126430 PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.0e-20
Identity = 56/80 (70.00%), Postives = 66/80 (82.50%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +GM SALDTLCGQS+GAK+YHMLG+HTQ +MFVLL+VSI L  I + T  IL AL QD D
Sbjct: 93  LGMGSALDTLCGQSYGAKQYHMLGIHTQRSMFVLLLVSIPLAFIWAYTGEILGALGQDSD 152

Query: 61  ISKGAGLYARYMIPSVVAYG 81
           IS GAG+YAR+MIPS+ AYG
Sbjct: 153 ISHGAGIYARWMIPSLFAYG 172

[Close]

BLAST of CmaCh10G003170 vs. TAIR10
Match: AT1G73700.1 (AT1G73700.1 MATE efflux family protein)

HSP 1 Score: 93.6 bits (231), Expect = 6.0e-20
Identity = 47/80 (58.75%), Postives = 63/80 (78.75%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +G ASAL+TLCGQ++GAK Y  LG+  Q AMFVLL++S+ L II +NT+ IL+ +HQD+ 
Sbjct: 80  LGTASALETLCGQAYGAKLYGKLGIQMQRAMFVLLILSVPLSIIWANTEQILVLVHQDKS 139

Query: 61  ISKGAGLYARYMIPSVVAYG 81
           I+  AG YA+YMIPS+ AYG
Sbjct: 140 IASVAGSYAKYMIPSLFAYG 159

[Close]

BLAST of CmaCh10G003170 vs. TAIR10
Match: AT5G52450.1 (AT5G52450.1 MATE efflux family protein)

HSP 1 Score: 87.8 bits (216), Expect = 3.3e-18
Identity = 46/80 (57.50%), Postives = 61/80 (76.25%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           MG ASALDTLCGQ++GAK+Y MLG+  Q AMFVL + SI L II +NT+ +L+   Q++ 
Sbjct: 82  MGTASALDTLCGQAYGAKKYGMLGIQMQRAMFVLTLASIPLSIIWANTEHLLVFFGQNKS 141

Query: 61  ISKGAGLYARYMIPSVVAYG 81
           I+  AG YA++MIPS+ AYG
Sbjct: 142 IATLAGSYAKFMIPSIFAYG 161

[Close]

BLAST of CmaCh10G003170 vs. TAIR10
Match: AT2G34360.1 (AT2G34360.1 MATE efflux family protein)

HSP 1 Score: 84.3 bits (207), Expect = 3.6e-17
Identity = 43/80 (53.75%), Postives = 59/80 (73.75%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           MG ASA+DT+CGQS+GAK Y MLG+  Q AM VL ++S+ L I+ +NT+  L+   QD+ 
Sbjct: 83  MGTASAMDTVCGQSYGAKMYGMLGIQMQRAMLVLTLLSVPLSIVWANTEHFLVFFGQDKS 142

Query: 61  ISKGAGLYARYMIPSVVAYG 81
           I+  +G YAR+MIPS+ AYG
Sbjct: 143 IAHLSGSYARFMIPSIFAYG 162

[Close]

BLAST of CmaCh10G003170 vs. TAIR10
Match: AT3G23550.1 (AT3G23550.1 MATE efflux family protein)

HSP 1 Score: 78.6 bits (192), Expect = 2.0e-15
Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 1


Query: 2   GMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQDI 61
           G++ AL+TLCGQ FGAK Y MLG+H Q +  V LV +I + I+   T+ + + L QD  I
Sbjct: 88  GLSGALETLCGQGFGAKSYRMLGIHLQSSCIVSLVFTILITILWFFTESVFLLLRQDPSI 147

Query: 62  SKGAGLYARYMIPSVVAYG 81
           SK A LY +Y+ P ++AYG
Sbjct: 148 SKQAALYMKYLAPGLLAYG 166

[Close]

BLAST of CmaCh10G003170 vs. TAIR10
Match: AT3G23560.1 (AT3G23560.1 MATE efflux family protein)

HSP 1 Score: 77.4 bits (189), Expect = 4.4e-15
Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +G++ +L+TLCGQ FGAKRY MLG+H Q +  V LV SI + I    T+ I   L QD  
Sbjct: 95  VGLSGSLETLCGQGFGAKRYRMLGVHLQSSCIVSLVFSILITIFWFFTESIFGLLRQDPS 154

Query: 61  ISKGAGLYARYMIPSVVAYG 81
           ISK A LY +Y  P ++AYG
Sbjct: 155 ISKQAALYMKYQAPGLLAYG 174

[Close]

BLAST of CmaCh10G003170 vs. NCBI nr
Match: gi|641843943|gb|KDO62839.1| (hypothetical protein CISIN_1g010345mg [Citrus sinensis])

HSP 1 Score: 109.0 bits (271), Expect = 3.9e-21
Identity = 51/79 (64.56%), Postives = 68/79 (86.08%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +G++SAL+TLCGQS+GAK+YHMLG+H Q  MFVLL++S+ L +I +NT+ +L+A HQD +
Sbjct: 94  VGLSSALETLCGQSYGAKQYHMLGIHMQRGMFVLLLISVPLALIWANTESLLVAAHQDSE 153

Query: 61  ISKGAGLYARYMIPSVVAY 80
           ISK AGLYARYMIPS+ AY
Sbjct: 154 ISKEAGLYARYMIPSIFAY 172

[Close]

BLAST of CmaCh10G003170 vs. NCBI nr
Match: gi|567919360|ref|XP_006451686.1| (hypothetical protein CICLE_v10008114mg [Citrus clementina])

HSP 1 Score: 109.0 bits (271), Expect = 3.9e-21
Identity = 51/79 (64.56%), Postives = 68/79 (86.08%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +G++SAL+TLCGQS+GAK+YHMLG+H Q  MFVLL++S+ L +I +NT+ +L+A HQD +
Sbjct: 94  VGLSSALETLCGQSYGAKQYHMLGIHMQRGMFVLLLISVPLALIWANTESLLVAAHQDSE 153

Query: 61  ISKGAGLYARYMIPSVVAY 80
           ISK AGLYARYMIPS+ AY
Sbjct: 154 ISKEAGLYARYMIPSIFAY 172

[Close]

BLAST of CmaCh10G003170 vs. NCBI nr
Match: gi|641843942|gb|KDO62838.1| (hypothetical protein CISIN_1g010345mg [Citrus sinensis])

HSP 1 Score: 109.0 bits (271), Expect = 3.9e-21
Identity = 51/79 (64.56%), Postives = 68/79 (86.08%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +G++SAL+TLCGQS+GAK+YHMLG+H Q  MFVLL++S+ L +I +NT+ +L+A HQD +
Sbjct: 94  VGLSSALETLCGQSYGAKQYHMLGIHMQRGMFVLLLISVPLALIWANTESLLVAAHQDSE 153

Query: 61  ISKGAGLYARYMIPSVVAY 80
           ISK AGLYARYMIPS+ AY
Sbjct: 154 ISKEAGLYARYMIPSIFAY 172

[Close]

BLAST of CmaCh10G003170 vs. NCBI nr
Match: gi|641843944|gb|KDO62840.1| (hypothetical protein CISIN_1g010345mg [Citrus sinensis])

HSP 1 Score: 109.0 bits (271), Expect = 3.9e-21
Identity = 51/79 (64.56%), Postives = 68/79 (86.08%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           +G++SAL+TLCGQS+GAK+YHMLG+H Q  MFVLL++S+ L +I +NT+ +L+A HQD +
Sbjct: 94  VGLSSALETLCGQSYGAKQYHMLGIHMQRGMFVLLLISVPLALIWANTESLLVAAHQDSE 153

Query: 61  ISKGAGLYARYMIPSVVAY 80
           ISK AGLYARYMIPS+ AY
Sbjct: 154 ISKEAGLYARYMIPSIFAY 172

[Close]

BLAST of CmaCh10G003170 vs. NCBI nr
Match: gi|1000940582|ref|XP_002532520.2| (PREDICTED: LOW QUALITY PROTEIN: protein DETOXIFICATION 16 [Ricinus communis])

HSP 1 Score: 107.8 bits (268), Expect = 8.7e-21
Identity = 53/80 (66.25%), Postives = 66/80 (82.50%), Query Frame = 1


Query: 1   MGMASALDTLCGQSFGAKRYHMLGLHTQCAMFVLLVVSIFLVIITSNTKMILIALHQDQD 60
           MGMAS LDTLCGQS+GAK+YHMLG+HTQ AM VL  +S+ L II +NT+ IL+ALHQD +
Sbjct: 64  MGMASGLDTLCGQSYGAKQYHMLGIHTQRAMLVLSFISVCLAIIWANTRHILVALHQDPE 123

Query: 61  ISKGAGLYARYMIPSVVAYG 81
           IS+ AG+YA +MIP + AYG
Sbjct: 124 ISQEAGVYACFMIPGLFAYG 143

The following BLAST results are available for this feature:

BLAST of CmaCh10G003170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DTX17_ARATH	1.1e-18	58.75	Protein DETOXIFICATION 17 OS=Arabidopsis thaliana GN=DTX17 PE=2 SV=1	[more]
DTX16_ARATH	5.8e-17	57.50	Protein DETOXIFICATION 16 OS=Arabidopsis thaliana GN=DTX16 PE=2 SV=1	[more]
DTX15_ARATH	6.4e-16	53.75	Protein DETOXIFICATION 15 OS=Arabidopsis thaliana GN=DTX15 PE=3 SV=1	[more]
DTX18_ARATH	3.5e-14	48.10	Protein DETOXIFICATION 18 OS=Arabidopsis thaliana GN=DTX18 PE=2 SV=1	[more]
DTX19_ARATH	7.8e-14	50.00	Protein DETOXIFICATION 19 OS=Arabidopsis thaliana GN=DTX19 PE=2 SV=1	[more]

BLAST of CmaCh10G003170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067F632_CITSI	2.7e-21	64.56	Protein DETOXIFICATION OS=Citrus sinensis GN=CISIN_1g010345mg PE=3 SV=1	[more]
V4UR20_9ROSI	2.7e-21	64.56	Protein DETOXIFICATION OS=Citrus clementina GN=CICLE_v10008114mg PE=3 SV=1	[more]
A0A067F9N3_CITSI	2.7e-21	64.56	Protein DETOXIFICATION OS=Citrus sinensis GN=CISIN_1g010345mg PE=3 SV=1	[more]
A0A067F671_CITSI	2.7e-21	64.56	Protein DETOXIFICATION OS=Citrus sinensis GN=CISIN_1g010345mg PE=3 SV=1	[more]
W1PCG4_AMBTC	1.0e-20	70.00	Protein DETOXIFICATION OS=Amborella trichopoda GN=AMTR_s00006p00126430 PE=3 SV=1	[more]

BLAST of CmaCh10G003170 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G73700.1	6.0e-20	58.75	MATE efflux family protein	[more]
AT5G52450.1	3.3e-18	57.50	MATE efflux family protein	[more]
AT2G34360.1	3.6e-17	53.75	MATE efflux family protein	[more]
AT3G23550.1	2.0e-15	48.10	MATE efflux family protein	[more]
AT3G23560.1	4.4e-15	50.00	MATE efflux family protein	[more]

BLAST of CmaCh10G003170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|641843943\|gb\|KDO62839.1\|	3.9e-21	64.56	hypothetical protein CISIN_1g010345mg [Citrus sinensis]	[more]
gi\|567919360\|ref\|XP_006451686.1\|	3.9e-21	64.56	hypothetical protein CICLE_v10008114mg [Citrus clementina]	[more]
gi\|641843942\|gb\|KDO62838.1\|	3.9e-21	64.56	hypothetical protein CISIN_1g010345mg [Citrus sinensis]	[more]
gi\|641843944\|gb\|KDO62840.1\|	3.9e-21	64.56	hypothetical protein CISIN_1g010345mg [Citrus sinensis]	[more]
gi\|1000940582\|ref\|XP_002532520.2\|	8.7e-21	66.25	PREDICTED: LOW QUALITY PROTEIN: protein DETOXIFICATION 16 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002528	MATE_fam

Vocabulary: **Biological Process**
Term	Definition
GO:0006855	drug transmembrane transport
GO:0055085	transmembrane transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0015238	drug transmembrane transporter activity
GO:0015297	antiporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006855	drug transmembrane transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0015238	drug transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G003170.1	CmaCh10G003170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002528	Multi antimicrobial extrusion protein	PFAM	PF01554	MatE	coord: 1..79 score: 3.9
None	No IPR available	PANTHER	PTHR11206	MULTIDRUG RESISTANCE PROTEIN	coord: 1..80 score: 1.0
None	No IPR available	PANTHER	PTHR11206:SF173	SUBFAMILY NOT NAMED	coord: 1..80 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh10G003170	Wax gourd	cmawgoB0069
CmaCh10G003170	Wax gourd	cmawgoB0077
CmaCh10G003170	Cucurbita maxima (Rimu)	cmacmaB072
CmaCh10G003170	Cucurbita maxima (Rimu)	cmacmaB093
CmaCh10G003170	Cucurbita maxima (Rimu)	cmacmaB100
CmaCh10G003170	Cucurbita maxima (Rimu)	cmacmaB103
CmaCh10G003170	Cucumber (Gy14) v1	cgycmaB0256
CmaCh10G003170	Cucumber (Gy14) v1	cgycmaB0315
CmaCh10G003170	Cucurbita moschata (Rifu)	cmacmoB067
CmaCh10G003170	Cucurbita moschata (Rifu)	cmacmoB068
CmaCh10G003170	Wild cucumber (PI 183967)	cmacpiB051
CmaCh10G003170	Wild cucumber (PI 183967)	cmacpiB057
CmaCh10G003170	Cucumber (Chinese Long) v2	cmacuB050
CmaCh10G003170	Cucumber (Chinese Long) v2	cmacuB056
CmaCh10G003170	Melon (DHL92) v3.5.1	cmameB054
CmaCh10G003170	Melon (DHL92) v3.5.1	cmameB067
CmaCh10G003170	Watermelon (Charleston Gray)	cmawcgB065
CmaCh10G003170	Watermelon (Charleston Gray)	cmawcgB071
CmaCh10G003170	Watermelon (97103) v1	cmawmB064
CmaCh10G003170	Watermelon (97103) v1	cmawmB071
CmaCh10G003170	Cucurbita pepo (Zucchini)	cmacpeB073
CmaCh10G003170	Cucurbita pepo (Zucchini)	cmacpeB080
CmaCh10G003170	Cucurbita pepo (Zucchini)	cmacpeB092
CmaCh10G003170	Bottle gourd (USVL1VR-Ls)	cmalsiB075
CmaCh10G003170	Cucumber (Gy14) v2	cgybcmaB006
CmaCh10G003170	Cucumber (Gy14) v2	cgybcmaB581
CmaCh10G003170	Melon (DHL92) v3.6.1	cmamedB056
CmaCh10G003170	Melon (DHL92) v3.6.1	cmamedB070
CmaCh10G003170	Silver-seed gourd	carcmaB0828
CmaCh10G003170	Silver-seed gourd	carcmaB1091
CmaCh10G003170	Cucumber (Chinese Long) v3	cmacucB0060
CmaCh10G003170	Cucumber (Chinese Long) v3	cmacucB0065
CmaCh10G003170	Cucumber (Chinese Long) v3	cmacucB0092
CmaCh10G003170	Watermelon (97103) v2	cmawmbB071
CmaCh10G003170	Watermelon (97103) v2	cmawmbB081