CmaCh10G002810 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGACATCCACTCGATCGCCGGAGGAAGTCGGTTGTTCGGTGGCGGGGGTGACCGTCGTCTGAGGCCGCACCTCCACCACCACCAAAACCACCAGGCCTTGAAGTGCCCAAGGTGTGATTCTCTCAATACAAAGTTCTGTTATTACAATAACTACAATCTCTCTCAGCCTCGTCACTTCTGCAAGAGCTGCCGACGCTACTGGACTAAAGGTGGCGTCCTCCGTAACGTTCCTGTCGGAGGCGGTTGCCGGAAAACCAAACGCTCCTCCTCCTCCTCCAAGTCCACTCCCGATGTGGCGACGACGTCTCCTCCTCCTCCTCCTCCTCTTCGCGAACGTAAATCCACCTCTCATTCCAGCAGCGAGAGCTCCAGCCTAACCGCTACAACCACCACGGCTGCCGCCGCGGCGACAGAGGCCGTCTCTGCTCCGTCCTCCATTTCAACGTCGGCTCTATTGAGCGTACAGGATAGGAAATTGTTCCCCGCTCCGACTACAAACCCTAATTTCGAAGGTGCGGCGGGTGCGGGGACGGACTGCGGGATTTTCTCGGAAATCGGAAACTTCACGAGCTTGATCACATCGTCTAACGAGACATTGGCGTTCGGATTCGGCAATATGGGGGACGTGACGCCGTTTGCGATGAATCATCCGTTTCAAAATCAAGCGGCGAATCAATGGCCGTCACAGAGAATGATGAACGGTAACGATGAGGTGAAGATGCAAGAGATCACAGGCGGAGGAGGAGGGTACATGGATCAGACGGCACAGGTGGATCCATCAGCAGGGCTTCAGAATAGCAGATCAAGCATCATTGGATTCGGACCGTTAGATTGGCAATCAAACGGAGATCATCAAGCTCTGTTTGATCTCCCCAACGCCGTTGATCAAGCATACTGGAGTCAAAATCAGTGGAGTAGTGATCAAGATCAGCCTAATCTGTACCTCCCGTAAATCACTCGAGACCACAGTCAAGACGACTTTCTTAGCCGACCACCTCCGTTTCTTTTTTCTTTTTCTTTTAATTTTTTTTCCCTAATTTTAGTATATAATTAAAAAAAAAAAAATCTCTCAATTAAAAAAAAAAAAAAATCAAAATCAAATTTCGAAATATAAAAAGAAAAGAGAGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGTATGTAAATCCGCCTATAGTATATTGAATTTGAGCTTCGTTTATGATGAATTTCGGATTTTCGTTGCCCCTATAGGATGAGGAGGAGGAGGAGGAGGATGATGACGTGGAGAATATTGGGTGACGTGGGGGCCACGTATCTCTCTACAAAGGACGAGAATATGAAGGTTTTTTCTCTGGGCTTCGTCTTTTGGTTTCCACGTCACTTGAAACAGTATTACTGTGCTGTCACTGTCACTGTCACTGTCACTGTCACTGTCACTGTCGCTGAGTCTTGTGGTAATAAATACACCTCACTTTCTTCTTAATTACAATAATGCCTCCAATTCTTTCATTGTCGGTATCTCTCTTCCAACTTTGTTCATCATTTTTCGTATAATATTTCACAAATTACCTCCTTAATTTTACTCTTTATTCATATTTATTTATTGTTCAAGTTGTTAATCATATCGTACTGTCCAAATTTTGAACGTAAACATAAGAAAAATTGTTAATGTTTGAGAACTCCCACTGCCCTCTCTGTGGTTGTTGCTTGTGGGGATGGAGATTGGATTGGTAAGTACTCTGCTGCAATGGTCCTGGAATGGGAATTGGCTTGCTTGATCAAGCGAGACCTGACCTGTGAACTGTCATTTTCGTTGTCTCTCCCTTCTTGCTTCTACACAACATTCAACATTCATGATTCCAACTGCGATCTACCCTTCGATTTGGACTTGGCATATGGTGGTGGCTGA ATGCAAGACATCCACTCGATCGCCGGAGGAAGTCGGTTGTTCGGTGGCGGGGGTGACCGTCGTCTGAGGCCGCACCTCCACCACCACCAAAACCACCAGGCCTTGAAGTGCCCAAGGTGTGATTCTCTCAATACAAAGTTCTGTTATTACAATAACTACAATCTCTCTCAGCCTCGTCACTTCTGCAAGAGCTGCCGACGCTACTGGACTAAAGGTGGCGTCCTCCGTAACGTTCCTGTCGGAGGCGGTTGCCGGAAAACCAAACGCTCCTCCTCCTCCTCCAAGTCCACTCCCGATGTGGCGACGACGTCTCCTCCTCCTCCTCCTCCTCTTCGCGAACGTAAATCCACCTCTCATTCCAGCAGCGAGAGCTCCAGCCTAACCGCTACAACCACCACGGCTGCCGCCGCGGCGACAGAGGCCGTCTCTGCTCCGTCCTCCATTTCAACGTCGGCTCTATTGAGCGTACAGGATAGGAAATTGTTCCCCGCTCCGACTACAAACCCTAATTTCGAAGGTGCGGCGGGTGCGGGGACGGACTGCGGGATTTTCTCGGAAATCGGAAACTTCACGAGCTTGATCACATCGTCTAACGAGACATTGGCGTTCGGATTCGGCAATATGGGGGACGTGACGCCGTTTGCGATGAATCATCCGTTTCAAAATCAAGCGGCGAATCAATGGCCGTCACAGAGAATGATGAACGGTAACGATGAGGTGAAGATGCAAGAGATCACAGGCGGAGGAGGAGGGTACATGGATCAGACGGCACAGGTGGATCCATCAGCAGGGCTTCAGAATAGCAGATCAAGCATCATTGGATTCGGACCGTTAGATTGGCAATCAAACGGAGATCATCAAGCTCTGTTTGATCTCCCCAACGCCGTTGATCAAGCATACTGGAGTCAAAATCAGTGGAGTAGTGATCAAGATCAGCCTAATCTGTACCTCCCGATGAGGAGGAGGAGGAGGAGGATGATGACGTGGAGAATATTGGGTGACGTGGGGGCCACGTATCTCTCTACAAAGGACGAGAATATGAAGGTTTTTTCTCTGGGCTTCGTCTTTTGGTTTCCACGTCACTTGAAACAGTATTACTGTGCTGTCACTGTCACTGTCACTGTCACTGTCACTGTCACTGTCGCTGAGTCTTGTGATTGGATTGGTAAGTACTCTGCTGCAATGGTCCTGGAATGGGAATTGGCTTGCTTGATCAAGCGAGACCTGACCTGTGAACTGTCATTTTCGTTGTCTCTCCCTTCTTGCTTCTACACAACATTCAACATTCATGATTCCAACTGCGATCTACCCTTCGATTTGGACTTGGCATATGGTGGTGGCTGA ATGCAAGACATCCACTCGATCGCCGGAGGAAGTCGGTTGTTCGGTGGCGGGGGTGACCGTCGTCTGAGGCCGCACCTCCACCACCACCAAAACCACCAGGCCTTGAAGTGCCCAAGGTGTGATTCTCTCAATACAAAGTTCTGTTATTACAATAACTACAATCTCTCTCAGCCTCGTCACTTCTGCAAGAGCTGCCGACGCTACTGGACTAAAGGTGGCGTCCTCCGTAACGTTCCTGTCGGAGGCGGTTGCCGGAAAACCAAACGCTCCTCCTCCTCCTCCAAGTCCACTCCCGATGTGGCGACGACGTCTCCTCCTCCTCCTCCTCCTCTTCGCGAACGTAAATCCACCTCTCATTCCAGCAGCGAGAGCTCCAGCCTAACCGCTACAACCACCACGGCTGCCGCCGCGGCGACAGAGGCCGTCTCTGCTCCGTCCTCCATTTCAACGTCGGCTCTATTGAGCGTACAGGATAGGAAATTGTTCCCCGCTCCGACTACAAACCCTAATTTCGAAGGTGCGGCGGGTGCGGGGACGGACTGCGGGATTTTCTCGGAAATCGGAAACTTCACGAGCTTGATCACATCGTCTAACGAGACATTGGCGTTCGGATTCGGCAATATGGGGGACGTGACGCCGTTTGCGATGAATCATCCGTTTCAAAATCAAGCGGCGAATCAATGGCCGTCACAGAGAATGATGAACGGTAACGATGAGGTGAAGATGCAAGAGATCACAGGCGGAGGAGGAGGGTACATGGATCAGACGGCACAGGTGGATCCATCAGCAGGGCTTCAGAATAGCAGATCAAGCATCATTGGATTCGGACCGTTAGATTGGCAATCAAACGGAGATCATCAAGCTCTGTTTGATCTCCCCAACGCCGTTGATCAAGCATACTGGAGTCAAAATCAGTGGAGTAGTGATCAAGATCAGCCTAATCTGTACCTCCCGATGAGGAGGAGGAGGAGGAGGATGATGACGTGGAGAATATTGGGTGACGTGGGGGCCACGTATCTCTCTACAAAGGACGAGAATATGAAGGTTTTTTCTCTGGGCTTCGTCTTTTGGTTTCCACGTCACTTGAAACAGTATTACTGTGCTGTCACTGTCACTGTCACTGTCACTGTCACTGTCACTGTCGCTGAGTCTTGTGATTGGATTGGTAAGTACTCTGCTGCAATGGTCCTGGAATGGGAATTGGCTTGCTTGATCAAGCGAGACCTGACCTGTGAACTGTCATTTTCGTTGTCTCTCCCTTCTTGCTTCTACACAACATTCAACATTCATGATTCCAACTGCGATCTACCCTTCGATTTGGACTTGGCATATGGTGGTGGCTGA MQDIHSIAGGSRLFGGGGDRRLRPHLHHHQNHQALKCPRCDSLNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKTKRSSSSSKSTPDVATTSPPPPPPLRERKSTSHSSSESSSLTATTTTAAAAATEAVSAPSSISTSALLSVQDRKLFPAPTTNPNFEGAAGAGTDCGIFSEIGNFTSLITSSNETLAFGFGNMGDVTPFAMNHPFQNQAANQWPSQRMMNGNDEVKMQEITGGGGGYMDQTAQVDPSAGLQNSRSSIIGFGPLDWQSNGDHQALFDLPNAVDQAYWSQNQWSSDQDQPNLYLPMRRRRRRMMTWRILGDVGATYLSTKDENMKVFSLGFVFWFPRHLKQYYCAVTVTVTVTVTVTVAESCDWIGKYSAAMVLEWELACLIKRDLTCELSFSLSLPSCFYTTFNIHDSNCDLPFDLDLAYGGG
BLAST of CmaCh10G002810 vs. Swiss-Prot
Match: DOF54_ARATH (Dof zinc finger protein DOF5.4 OS=Arabidopsis thaliana GN=DOF5.4 PE=2 SV=2) HSP 1 Score: 233.0 bits (593), Expect = 6.2e-60 Identity = 155/339 (45.72%), Postives = 194/339 (57.23%), Query Frame = 1
BLAST of CmaCh10G002810 vs. Swiss-Prot
Match: DOF57_ARATH (Dof zinc finger protein DOF5.7 OS=Arabidopsis thaliana GN=DOF5.7 PE=2 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.6e-26 Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 1
BLAST of CmaCh10G002810 vs. Swiss-Prot
Match: DOF31_ARATH (Dof zinc finger protein DOF3.1 OS=Arabidopsis thaliana GN=DOF3.1 PE=2 SV=2) HSP 1 Score: 121.3 bits (303), Expect = 2.6e-26 Identity = 62/93 (66.67%), Postives = 67/93 (72.04%), Query Frame = 1
BLAST of CmaCh10G002810 vs. Swiss-Prot
Match: PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays GN=PBF PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 4.5e-26 Identity = 66/115 (57.39%), Postives = 78/115 (67.83%), Query Frame = 1
BLAST of CmaCh10G002810 vs. Swiss-Prot
Match: DOF32_ARATH (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana GN=DOF3.2 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 7.7e-26 Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 1
BLAST of CmaCh10G002810 vs. TrEMBL
Match: A0A0A0LSJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015610 PE=4 SV=1) HSP 1 Score: 480.7 bits (1236), Expect = 1.9e-132 Identity = 272/349 (77.94%), Postives = 281/349 (80.52%), Query Frame = 1
BLAST of CmaCh10G002810 vs. TrEMBL
Match: A0A067KGJ9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11766 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 3.9e-93 Identity = 213/345 (61.74%), Postives = 246/345 (71.30%), Query Frame = 1
BLAST of CmaCh10G002810 vs. TrEMBL
Match: W9RP28_9ROSA (Dof zinc finger protein OS=Morus notabilis GN=L484_016668 PE=4 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 4.5e-89 Identity = 214/351 (60.97%), Postives = 247/351 (70.37%), Query Frame = 1
BLAST of CmaCh10G002810 vs. TrEMBL
Match: M5WA03_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008568mg PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 3.2e-87 Identity = 212/344 (61.63%), Postives = 237/344 (68.90%), Query Frame = 1
BLAST of CmaCh10G002810 vs. TrEMBL
Match: D9ZIX7_MALDO (DOF domain class transcription factor OS=Malus domestica GN=DOF10 PE=2 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 2.4e-82 Identity = 201/340 (59.12%), Postives = 218/340 (64.12%), Query Frame = 1
BLAST of CmaCh10G002810 vs. TAIR10
Match: AT5G60850.1 (AT5G60850.1 OBF binding protein 4) HSP 1 Score: 233.0 bits (593), Expect = 3.5e-61 Identity = 155/339 (45.72%), Postives = 194/339 (57.23%), Query Frame = 1
BLAST of CmaCh10G002810 vs. TAIR10
Match: AT5G65590.1 (AT5G65590.1 Dof-type zinc finger DNA-binding family protein) HSP 1 Score: 122.1 bits (305), Expect = 8.7e-28 Identity = 53/75 (70.67%), Postives = 63/75 (84.00%), Query Frame = 1
BLAST of CmaCh10G002810 vs. TAIR10
Match: AT3G21270.1 (AT3G21270.1 DOF zinc finger protein 2) HSP 1 Score: 121.3 bits (303), Expect = 1.5e-27 Identity = 62/93 (66.67%), Postives = 67/93 (72.04%), Query Frame = 1
BLAST of CmaCh10G002810 vs. TAIR10
Match: AT3G45610.1 (AT3G45610.1 Dof-type zinc finger DNA-binding family protein) HSP 1 Score: 119.8 bits (299), Expect = 4.3e-27 Identity = 54/75 (72.00%), Postives = 64/75 (85.33%), Query Frame = 1
BLAST of CmaCh10G002810 vs. TAIR10
Match: AT1G51700.1 (AT1G51700.1 DOF zinc finger protein 1) HSP 1 Score: 119.8 bits (299), Expect = 4.3e-27 Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 1
BLAST of CmaCh10G002810 vs. NCBI nr
Match: gi|778656191|ref|XP_011648588.1| (PREDICTED: dof zinc finger protein DOF5.4 [Cucumis sativus]) HSP 1 Score: 480.7 bits (1236), Expect = 2.7e-132 Identity = 272/349 (77.94%), Postives = 281/349 (80.52%), Query Frame = 1
BLAST of CmaCh10G002810 vs. NCBI nr
Match: gi|659106401|ref|XP_008453317.1| (PREDICTED: dof zinc finger protein DOF5.4 [Cucumis melo]) HSP 1 Score: 476.5 bits (1225), Expect = 5.2e-131 Identity = 266/347 (76.66%), Postives = 277/347 (79.83%), Query Frame = 1
BLAST of CmaCh10G002810 vs. NCBI nr
Match: gi|1009132238|ref|XP_015883277.1| (PREDICTED: dof zinc finger protein DOF5.4 [Ziziphus jujuba]) HSP 1 Score: 359.4 bits (921), Expect = 9.2e-96 Identity = 217/332 (65.36%), Postives = 242/332 (72.89%), Query Frame = 1
BLAST of CmaCh10G002810 vs. NCBI nr
Match: gi|802653853|ref|XP_012080436.1| (PREDICTED: dof zinc finger protein DOF5.4 [Jatropha curcas]) HSP 1 Score: 350.1 bits (897), Expect = 5.6e-93 Identity = 213/345 (61.74%), Postives = 246/345 (71.30%), Query Frame = 1
BLAST of CmaCh10G002810 vs. NCBI nr
Match: gi|703118590|ref|XP_010101639.1| (Dof zinc finger protein [Morus notabilis]) HSP 1 Score: 336.7 bits (862), Expect = 6.4e-89 Identity = 214/351 (60.97%), Postives = 247/351 (70.37%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |