CmaCh09G012900 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G012900
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	DNA primase
Location	Cma_Chr09 : 8896104 .. 8905909 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCTATAGGTCCATTAGGTTCCTCTGCTAGCTCATATCGGACTAAATCATAGAACAGTGTGACGAGTGAGTTCGAAGTGTTCGAATTCAAATTAGGGAGAATGCGCTACATATATACGATATATTTAACCGCATTTTTGTTTTATTTACGAATTAAATAAAAAGAAAGAATCTGAGATATTTAAATAAGTCTTAATCAAATATGTGTTGGAATTAATTGGGATTGACATTTGAATTAATATTAAATATTAATTAAATAGTTTAATTAATCATTTAATATTACTTTAATTTGAAATTAATAATTCAAATGGATGGTTGAATCAAAATGAAGAAAGTCAAAAAGTTGACTTCATTTAATGGAAAAATCCCTCTCTTCATATATACAAAATCCCTCCCAAGTTTAGTCACTCATTGGATTCCACAATCCCGTTCTAAGGCTGGAGGATAGTGGAGAAGACACTAGTGGTGGTTCGAAACCGGTTCGTGAGGAAAAAGGAATTTGAACTACAAAAGGTTAGCATTCAAATTCATTACGTTTTAATACTTATGAACATGCTAGTTATTTACTATAATTGATGTTCTAAAAGTGCCTAAGATTCAAATTGCTTCCGCATGTGTTATATTAACACCATCAGTAACAGGCTAGAGTAGACGATGATACATGTGGGAATCTCAATTTGGTTAGAGTAGTATTAGAGCAAGCACACAACGTGGGAATCTCACAATCTACCCCCTGAACCTAGCGTTCTCGTTTGCACTCGTTCCTTTTTCCAATTAACATCCCTCCACCCCTTTCAGGGCCTAGCGTTCCACCCCTTTCAAGGCCCTAGCGCTCGTTCTCTTTTCCAATCAACGTGGGATCCCCAAATCCACCTTCCTTTGAGCCTAATGTCCTTGCTGGCACACTGCCTCATGTCCACTCCCTTCGGGGCTCAGCCTTTTCACTAACATATTGTCTGGTGTCTAACTCTGATACCATTTGTAACAACCTAATCTCACCGCTTGCAAATATTGTCCTATTTGGGCTTAACATCCCTCCACTCCTTTTAGGGCCTAGCGTTTCACCCCTTTCAAGGCCCTAGCGCTTGTTCCCTTTTCCAATCAACGTGGGATCCCCAAATCCACCATCCTTTGGGCCTAATGTTCTTGCTGGCACACTGTCTCATGTCTACTCCCTTCGAGGCTCAGCCTTTTCACTGACATATTGTCTGGTGTCTAACTCTGATACCATTTGTAACAACCTTTCGGGGCTCAGCATTTTCACTGACATATCGTCTGGTGTCTAACTCTGATACCATTTGTAACAACCTAATCTCACCGCTTGCAAATATTGTCCTATTTGGGCTTAACATCCCTCCACTCCTTTCAGGGCCTAGCGTTTCACCCCTTTCAAGGCCCTAGCGCTTGTTCCCTTTTCCAATCAACGTGGGATCCCCAAATTCACCTTCCTTTGGGCCTAATGTTCTTGCTGTCACACTGCCTCATGTCTACTCCCTTCGAGGCTCAGCCTTTTCACTGACACATTGTCTAGTGTCTAACTCTGATACCATTTGTAACAACCTAATCTCATCGCTTGCAAATATTGTCCTTTTTGGGCTTTCCCTTTCGGGCTCCCCTTAAGATTTTTAAAACGCCTCTACTAGGGAGAGGTTTCGACACCTTTATAAAAAGATGTTTAGTTCTCCACTTTAACCCATGTGGCATCTTTAAATATATACATATACATATATATTAAAATTAGGCATCACGCATCACCTTATTTTCCTAAATCAAATTTTTTTAATACATGTATCCTAATTTTTTATTTTATACATGTCACATATTTTCATTGATAGTCGGTTCAAACAGACCGAACCGGACGAACCGGCCGAACCGAGAGGAAGGGGCAACTTCCCGCCTAAACTTCCTATCTTGCCCCATTCTGTCAGTAGACTCCCGCCATTTCTGTTCCTAATTATATTTGTGTCTGCGGCGTCGAATCCCAGTGCTCCAATTTTCCGATCGAACTTCATAATCTGTTTCCACTGCGATTCATTATCCTATTAGGTCTTGTTTTGATTTTGGTTTAAATTTTCCTTCGCCGCTTCGATTGTGCAGTAGTATACAGAGTGCTGTGGCGAAAATGGTTCATGAAGCGGCTGATATGGTAATTGACGGGAACGAACAGAAGCCGAAGAACATTGTTTCTAATGGATTCGATGCGAATTATCTCAAAATTTACTACGGTGCACCATTTATACCTTTTTCGATTTTTTTAGAAATTTCTGTGTTGAATTGAATTGTCCCATCAAATTTAGTTAACTTGTCTGTTCTGTGTTTTTTCTGCTACTGAAAGGATATGAAATGTGATTGTTGTAGGCAAGCTTTTTCCTTTTGCTGATTTTTTCAAATGGATGTCTTATGGAAATGGTAAGCCCTTGATTCTTGGAATCAGAAACAAAATGTTATCCCCTCAGAAGAAGCTAATTAATATTGAATATGCAAATTTCCTGCCTAATGTGGTTGTAGATGGCAAGCATCCAGGCAGTGACCATTCTTATGTTGGCCGGAGAGAATTTTCATTCACCTTGGATAATGATATTTATCTACGGTTTCAATCTTTCAACAGTTTATCTGAAATGGAAAGTTCGACCAAGGAAAAATGTCCATTTAAAATTGATATTGGGCCTGTATACAGCGTGGATGTAAGCAAAAAATTTCCCTGTTGCTCTTTTTTCATAATTTGGTATTAAGTAATCAGATTTGTTTCAAGAAGTGAAGGCTTCAAACATTTTGGATACTTGTTTTTGTGTATTATTTATTTGAATGAGCCTTTTTCTTTTTTGTAATATTCATCTGTCTCTCACACATTTCAACTATTCTGCTTCAGCCTGCAAAGAGACACGCATATGCTGGTGCTAATGTATTTACTCCAGTGGAGAGAGAGCTAGTTTTTGATATTGTAAGCAGATTGTTTGTTAATATGCTCGGTATTCTAATTTAATTATGAAATCCTTTTCGTTGAGAAACTAATCGTGGAAATTCCTCCATATGTAGGATATGACCGATTATGATGATGTTAGATATTGTTGTTCTGGAGCTGATGTTTGCTTGGATTGCTGGCCTTTAATGACTGCTGCGATCAAAGTGATTGATACTACCCTCCGAGGTAAGAAACTCGTTATCTGTATCTAAAAAGTCATTCAAGAAATGAGTATGATTGCATGCATTCTCACAAACTCTTATTTTGAAAATGAATAAGCACAAGGAAGGTTGTGTGAGATCCCACATCGGTTAGGGAGGAGAACGAAGCATTTTTTATAAGGGTTTGGAAACCTCTCCCTACCGGACACGTTTTAAAAACCTTGAGGGGAAGCCCGGAGGGGAAAGCCCAAAGAGGATAATATCTGCTAGCAGTGGGCTTGGGTTGTTACAAATAGTATCAGAGTCAGATACCGGGCGATGTGTCAGCAAGGAGGTTGAGCGTCGAAGGGGATGGACATAAGGCGGTGTGCTAGCAAGGACGCTGGGCCTCGAAGGGGGGTGAATTGAGGGTCCCACATCGACTGGAGAAGGGAACGAGTGCTAGCAAGGACACTGGCCCCAAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGATGAGAACGAAACATTCTTAATAAGGGTTTTGAAACCTCTCCCTAGCAGACACGTTTTAAAAACCTTGCGGGAAAGCCTAAAAGGGAAAATCAAAATAGGACAATATCGGCTAGCATAGGCTTGGGTCGTCACAGTTTGTATGTCAATGAATGTTAGCTCGCTTTAGAGAAATCACTTACCTTCTTGGTAGTTTCCCCTCCCTGACCCGATGCTTAAGCCTATTTCTTTTTTCACTTTTATTGCGAATGAGATGTTCCATATTTTGAGCTCTTTAGTGTACTTCTTTTTAACTTATTTCTAAATTCTTACTTCAACATATTTGACTAGAAGAGAAGGAGGAAGTAGAATGTGTAAAAGGTGTTATGCATTCTAAAAAATTCAGATTATTAATTACTGGCTTACTGTCAGTTCTGTTCTGTATTACTACTCTGTCTCCTGTAGCCAGTTATATTTGCAATGCTTATGTTTATTTAAATATGTCCATACATTGAGCCTCACAACAATTTTTTAGAAGATATTTTAAAAAATATGGTACTGTGATATTGTCCAATGCATCTGAGAATTAAGTTTTCCATTGCAGTCCTATGATATCTTGAAATTTGTGTTGCAGATGACTTCGGATTTAACCACATTCTGTGGGTATTTAGTGGTCGACGTGGTGTTCATTGTTGGGTCTGTGATGGCAAAGCAAGAAGGTAAAGCTAGTAATCAAATTGTTGAAATTACAGTCAAATATATTATTTGCAAATGTCTAAAATTGCCACCATCACTCCTGCAGGTTGTCTAATGAACAGCGAGCTGCCATTGCTGACTATTTCCATTTATATCAGGTTATACTATGTTGCTATAAAATATTGGTGAATTTTAGTGTCTTGAGCTATGGTGTTGAATATGTTTGATGTGCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTAACGGGTCCGGTTCTTCATCCATTTCTCGCGTAAGTGGTTCTTAATGATGTGATGATTCGGTCACTTTTTTTTTCTCTCAGCTAACTTATGTATTTTGTTCCAGGAGATCATATATAGAAGTTCTCAAGGATAGCTTTGAATCAAAATTGCTTTGTAGTCAAAAGATTTTCTCAACTGAGGAGAGATATGAGAAAATACTAGATATGATTCATGATGAATGTAAGTGATTTATGTATTTGTCTCAGGTAAGTACTGTCAATATGATAATCTATACTAATAGAGTTTCTCCTGCAGCCATTACCTCGGAGCTTCGGGGAAGGTGGCAAGATAATAGGCGACCTTCTAAAAATGATGTTAATTTAGTAAGATGGGAGCAACTAAAAAATATGTTGCAATCAGGGAAACATAAGGTAGAATCAACATCTTTCTCATACTTGCAAGAAATTACTCTCCTGTTTATGCTTTCGTTTTTCCAACGCAACTTACCAATCAGGGGAGGGATAGCCATTAGACAACTTACCAATCAGGGGAGGGATAGCCATTAGACAACTTACCAATCAGGGGAGGGATAGCCATAGGGAAGCAAACATAGGTTTTGAGCTTGAGGAAGAAAAAGGAGCTACTATTTTCTAAAGGACTTAACCAAGCTAGAGCTACAAAATGTTCTAAGGACTTCACTCAACAGTCAAAAGCCCCCTTCCCCCTCTGAAGTCAGTTCTCCCTCTTACCTTTTGTCCTCATATACCAAGTTCTTAAAAGCTTTAACTGATATCCTCTACCCTTCCCCAGAAATCCAGCCTAATTGTCAAAGCAGCTTTCTGCCGTAGGTCTCACATTTATGGTCGATCACTCTCATCTTTCTTCGGGTAAAGGGCCCCCTATTAAAACCATTGTCCAATCAACAAACCCATCTGCCCTGTTCTCTACCAAAGATTAAAAAAGAGTTTATTTCTCTAACTCCAAAGTTTCCATGAAAATTTTCTTTGCAAATGGCATGAAACACTTCACCTCCTTGGACAGTCATCCTTGTATCAGACTTGATAGACCTCTCAAACCCTTTTCTAGTGAAGGGACAACATTTAAGAGAATGTAAGAAGTATTTTAATACGATAGGCACCGTTGAGTTGGAATAGAAATTGTATTTTAAATTGCAGAACGATAAATACAATAAAATATATGAGGTAACTCGAAGAACTTGTATACCTCCTTTTGGAGCAAGCATAACCCCAAACATATAAACGGTGGTTTGCTTTCACTCCCTCTCACTTCATTCAGAATCTCTTCTTGATAATGAACTTATTAGCCAATGACTAATATGCCCTTAGTACCCTAAGAATATTTATCTTCCTTTACGGAGAATAGTTGTGAGATCTCAAATCGATTGAGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCTCTAACATACAGTTTTAAAAACCTTGAAGGGAAGTTCAAAAGGGAAAGTTCAAAGAGGACAATATCTACTAACGGTGGGTTTGGACTATCGTGCTATTGGTTAGGCTGGGTTTTTGCAGTTTTATGGGGCATCTGGATTCAAATGAATAATAGAATATTTTGGGACATGATAAGATCTCTAGAGGAGGTTTGTCCTTATCTTCATTTAACGTCTTGGTCTGGGTGATTGGGTCTAAAGACGTCTGTAATTATTTATTAGGTTTTCTTTCTTTTTTTTCTTTTTTTTGGAATGGATCTCTTTTCTGGCTCCTTTTGGTTTGCCTCTTTTGTAAGTCCGTTTTTTGTTGGCTCGTGTTGCAAGCCTTTGGCTCTTCTCTATTCTTTCAGTTTTTTCAATTCAAGGTTGATTTTTTTTTTTAATTTTTTTTTTTATATTATTTAGACTGATACAAACGTATATATTTCAAGATTTATCATGTGGAATCCAAGTAACTGTGATCTTTATTTTTAGTTGCCTTTTCTAAAGAATCTATCTCCCTTTTCCCTTTTCTTTCTTTCTTTCCAGTCATGCGGCTAGATGTGACTTGGTGCTACATTTTATTTTCTTTTCTTTTCGAGTCTTCTATGTTGAGTTTAGGAAGTGTAAAGTTCAATTGTGCTACATTTAGACAGTAACTGTGACATTTTCCTTTGTTCAGTCACAAGGAATGCGTCGGCACGTTGAAGAGATCGTTTTCTCTTTTACCTACCCTAGGCTTGACTTGGAGGTACGTTTCTTACATGACTTTATCTTAACTAGATTTTTTTTCTCCATTTACTGGAATTAGGTCAATCTATTCTAGCAATTTGATTAGGTACATTTTCGATCTCTAATTGGCATGCATAGGGATTGCAACCAAAATTTCTAATTTACTTGTTAAAGCTGATTTTCGTTTACTCCCTTGATGAGGCAAGTTCTTTATTCTTCAGGTTACTAAACACATGAACCATCTGCTAAAAGCACCATTCTGTGTTCATCCCAAAACAGGTCAGTGTTGGAACTAAATGCTAATACTAGATGAGTTTTGATTTGCCAAAACCTCAATGTGGTCTCAATCTAAAATTAAATTCTTTAAGGTTCATATCAAAAAATATTTAAAGAATTCATTAAAATGCACTTGATTTGGAATCCTGCAAGTAATTTGGGTAGTAGTATGAAGGATGCAATGTTTTCACTTTTGTGAAGCGAAAATGTGTTTACATATTATTGAATCTTACTGTACTGTACCTTTTTATTCCAGGTCGTATCTGTGTCCCGATCGACCCTGAACGCTGTGATGAGTTTGATCCTACTACTGTGCCAACTGTTGCCCAGGTAAAACAACAAGAAATAAAGGGATATAATATACATACTATGTCTTTGCCAACTGATTTGCAGCGAGGAAAATGTTCAATTTTCAATTTAGTACCTGAAATTTGTCGTAGTTAGTGTTAGGATCACACAACAACGCACACACTCGATCTAGATAGACACAACGAACAGAAGTCGATATAGATGAACACAAAGAACATGAAAGAGAAAATGCAAGAAGTAATATTGGCTAAAAGTTTATATTGATGGTTTGACGTATGTATGTAGATAATACAAAAACAAAAAGGCAGAAAATACATTTTAAAAGAACCGAGTATATATATGGTTCAGTTTACTATATATAGCTATATAACTATCATATATAACTGTATTTCTTATATTTATATATATAGCTATATAACCATCTACTGTATATAACTATACTATAAATAGACCATTTTTCATAGTTTTAGTAGAACCATTGAATAAATATCTACTATATATATAGCTTTACCAGCTTTATGCATTAGAGCTGAAGAAAGACGATAAATATGTGTATAGATCAACCGTGATATACAGCAATTGTATAATTATGCTTGATGCTAATTTGGCTTCTGATCAATGACTTGAATTATAATAATGATTGCAGCTCCTAGAAGAACTTAATGCAGCAGACATGGAAGTAGATAGTGAGACTGGTAAGTTTTATGCAATCTTCACTATAGATTCGAGAAGCTCCTACTTTATTTGCTTGGGTAGCTGCGAGATTAACTAATGCCTGTTATAAACTTTTTGCTTTATGACAGACTGGGATAGAACCTCACTTGGGGAATCGATTAGGTTTTTCAGATCGGCATTCTTACAGCCATTACTGAAATCATGCAAGGTAATTCTTTCTTAATATATGGAGAGAATATCCGACCTTCCAAGTTTTAGATCATCATTCTTGTAGGCTCTAAATTGTACAGGGTAATTATTAGTCTATTAGAAGAACTAGGCTACTAATTATATAGCTTTATAGTTTGTTTGCTTGCTTGCTTGTGGTTTGATTCTGTAAAATGTGTAGTTTATTCGTGGTGGCGTACCTTGATAGACTCTCTTTTAGAAGGTTTGGTAGTTTGTACCTTTTCAAATATCAATGCAAAATTTGTTCCTTTGTAAAAAGAAAAGGTTAAAGGTTGAAGCTAGGCTACTTAGGTAGAACTACGTTCATATTTTCTTGCATCATTTTCTGGAATAACCACATTATTTTTATTTTTTCAGTACGAAATTGAGCTTACTTTGAGAAAAATAAAGAATATATGAGGGCATACAAAAAATCTAGCTCACAGAAGGATCATCAACTACAAGAACGAACTGTTTAACACAACTATTTGTGGAAAACACTCGCACTCTTTATTAACACCAATCGAGAAGAGATTATAAGAAACTCTTTAGAATACTATTCCCACTAAGCCTGTCTGGGACTTGTTGGGATGAAAACCTAGATAGGGTAAATGGGTACTTTTCTCTAATTGAGACTGCTCGGGACTTATTTGGATGAAAACTTAGGTAGGGTAGAGGGGTACTTTGCTTGGGAGGGAGTCTCACATTGGCTATTTAAGGGGATGATGATGGGTTTATAAGTAAGGACTACTATCTCTTTTGGTTTGAGGCCTTTTGGAGAAACCAAAAGTAAAGTCACGAGAGTTTATGCTCAAAGTGGACAATATCATATAATTGTGGAGAGTCGTGGTTCCTAATACCAAAGTCCCTATTACATACCATGAAAACCCCAAACAATCTAAAGCAGCGACATTATTATTTAGTTATAGGCTGCATTTTAACCGTCTTGAGCTTGTTATATATGTCCGATTGGAATTTGTCTAAGTTGTACCTTATGGATATGGCCATCTTCTATTAGGGATTTTTTCTACTGCTATATGGCAAAAGTACAGGGAGGCACTGAGGTTGGCTTACAAGATATTGTAACCTCTTCCTTTTGCATTTCATGCTTTACATGTTTGAATGATATAGACTTATGTAGCTAAAACGTAGGGTCTGCGACACCTTTTACCCTCTTCTTTTAACGCTCAACATGCTTTACATGCACGAATGTTGTATCTTTCGTGAGATAGAGCTCTCAGCCATGATTCTTGTTTCTTGCAGGAGGAGATAGAATCTTCATACAATGCTAAAGTTCAACAGTCGAAGAATCCTCTGAGTTGGTAGAGAGCTATATTAAGTAAGCACACCCTTTTTTAGCTTCTAGAAGTGTTCCATACTCTTCTGCAAAATCTTAAAACTGCAGTGTAAATATAACCAGAGGTAACTTAATTATGTTGAAAGGATTTCTCTGTATATGTAATGTTTGGCTAATTTATTGACATGAGGCTAAAAGACTTGACAGATTATTTTCATTTCTATTATAGTTTGCTGGGGAACTCATGCTTGTTTCTTTGGGTGTTCTGATGATTTACATTTGATGGTTTAAGGCTCGTTTAAT

mRNA sequence

ATGATCTATAGGTCCATTAGGTCTTGTTTTGATTTTGGTTTAAATTTTCCTTCGCCGCTTCGATTGTGCAGTAGTATACAGAGTGCTGTGGCGAAAATGGTTCATGAAGCGGCTGATATGGTAATTGACGGGAACGAACAGAAGCCGAAGAACATTGTTTCTAATGGATTCGATGCGAATTATCTCAAAATTTACTACGGCAAGCTTTTTCCTTTTGCTGATTTTTTCAAATGGATGTCTTATGGAAATGATGGCAAGCATCCAGGCAGTGACCATTCTTATGTTGGCCGGAGAGAATTTTCATTCACCTTGGATAATGATATTTATCTACGGTTTCAATCTTTCAACAGTTTATCTGAAATGGAAAGTTCGACCAAGGAAAAATGTCCATTTAAAATTGATATTGGGCCTGTATACAGCGTGGATCCTGCAAAGAGACACGCATATGCTGGTGCTAATGTATTTACTCCAGTGGAGAGAGAGCTAGTTTTTGATATTGATATGACCGATTATGATGATGTTAGATATTGTTGTTCTGGAGCTGATGTTTGCTTGGATTGCTGGCCTTTAATGACTGCTGCGATCAAAGTGATTGATACTACCCTCCGAGATGACTTCGGATTTAACCACATTCTGTGGGTATTTAGTGGTCGACGTGGTGTTCATTGTTGGGTCTGTGATGGCAAAGCAAGAAGGTTGTCTAATGAACAGCGAGCTGCCATTGCTGACTATTTCCATTTATATCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTAACGGGTCCGGTTCTTCATCCATTTCTCGCGAGATCATATATAGAAGTTCTCAAGGATAGCTTTGAATCAAAATTGCTTTGTAGTCAAAAGATTTTCTCAACTGAGGAGAGATATGAGAAAATACTAGATATGATTCATGATGAATCCATTACCTCGGAGCTTCGGGGAAGGTGGCAAGATAATAGGCGACCTTCTAAAAATGATGTTAATTTAGTAAGATGGGAGCAACTAAAAAATATGTTGCAATCAGGGAAACATAAGTCACAAGGAATGCGTCGGCACGTTGAAGAGATCGTTTTCTCTTTTACCTACCCTAGGCTTGACTTGGAGGTTACTAAACACATGAACCATCTGCTAAAAGCACCATTCTGTGTTCATCCCAAAACAGGTCGTATCTGTGTCCCGATCGACCCTGAACGCTGTGATGAGTTTGATCCTACTACTGTGCCAACTGTTGCCCAGCTCCTAGAAGAACTTAATGCAGCAGACATGGAAGTAGATAGTGAGACTGACTGGGATAGAACCTCACTTGGGGAATCGATTAGGTTTTTCAGATCGGCATTCTTACAGCCATTACTGAAATCATGCAAGGAGGAGATAGAATCTTCATACAATGCTAAAGTTCAACAGTCGAAGAATCCTCTGAGTTGGTAGAGAGCTATATTAAGTAAGCACACCCTTTTTTAGCTTCTAGAAGTGTTCCATACTCTTCTGCAAAATCTTAAAACTGCAGTGTAAATATAACCAGAGGTAACTTAATTATGTTGAAAGGATTTCTCTGTATATGTAATGTTTGGCTAATTTATTGACATGAGGCTAAAAGACTTGACAGATTATTTTCATTTCTATTATAGTTTGCTGGGGAACTCATGCTTGTTTCTTTGGGTGTTCTGATGATTTACATTTGATGGTTTAAGGCTCGTTTAAT

Coding sequence (CDS)

ATGATCTATAGGTCCATTAGGTCTTGTTTTGATTTTGGTTTAAATTTTCCTTCGCCGCTTCGATTGTGCAGTAGTATACAGAGTGCTGTGGCGAAAATGGTTCATGAAGCGGCTGATATGGTAATTGACGGGAACGAACAGAAGCCGAAGAACATTGTTTCTAATGGATTCGATGCGAATTATCTCAAAATTTACTACGGCAAGCTTTTTCCTTTTGCTGATTTTTTCAAATGGATGTCTTATGGAAATGATGGCAAGCATCCAGGCAGTGACCATTCTTATGTTGGCCGGAGAGAATTTTCATTCACCTTGGATAATGATATTTATCTACGGTTTCAATCTTTCAACAGTTTATCTGAAATGGAAAGTTCGACCAAGGAAAAATGTCCATTTAAAATTGATATTGGGCCTGTATACAGCGTGGATCCTGCAAAGAGACACGCATATGCTGGTGCTAATGTATTTACTCCAGTGGAGAGAGAGCTAGTTTTTGATATTGATATGACCGATTATGATGATGTTAGATATTGTTGTTCTGGAGCTGATGTTTGCTTGGATTGCTGGCCTTTAATGACTGCTGCGATCAAAGTGATTGATACTACCCTCCGAGATGACTTCGGATTTAACCACATTCTGTGGGTATTTAGTGGTCGACGTGGTGTTCATTGTTGGGTCTGTGATGGCAAAGCAAGAAGGTTGTCTAATGAACAGCGAGCTGCCATTGCTGACTATTTCCATTTATATCAGGGTAATGAAAATAGTCGCAAGAAAATTTCTCTAACGGGTCCGGTTCTTCATCCATTTCTCGCGAGATCATATATAGAAGTTCTCAAGGATAGCTTTGAATCAAAATTGCTTTGTAGTCAAAAGATTTTCTCAACTGAGGAGAGATATGAGAAAATACTAGATATGATTCATGATGAATCCATTACCTCGGAGCTTCGGGGAAGGTGGCAAGATAATAGGCGACCTTCTAAAAATGATGTTAATTTAGTAAGATGGGAGCAACTAAAAAATATGTTGCAATCAGGGAAACATAAGTCACAAGGAATGCGTCGGCACGTTGAAGAGATCGTTTTCTCTTTTACCTACCCTAGGCTTGACTTGGAGGTTACTAAACACATGAACCATCTGCTAAAAGCACCATTCTGTGTTCATCCCAAAACAGGTCGTATCTGTGTCCCGATCGACCCTGAACGCTGTGATGAGTTTGATCCTACTACTGTGCCAACTGTTGCCCAGCTCCTAGAAGAACTTAATGCAGCAGACATGGAAGTAGATAGTGAGACTGACTGGGATAGAACCTCACTTGGGGAATCGATTAGGTTTTTCAGATCGGCATTCTTACAGCCATTACTGAAATCATGCAAGGAGGAGATAGAATCTTCATACAATGCTAAAGTTCAACAGTCGAAGAATCCTCTGAGTTGGTAG

Protein sequence

MIYRSIRSCFDFGLNFPSPLRLCSSIQSAVAKMVHEAADMVIDGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRREFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYAGANVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEVLKDSFESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPSKNDVNLVRWEQLKNMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDPERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPLLKSCKEEIESSYNAKVQQSKNPLSW

Homology

[Close]

BLAST of CmaCh09G012900 vs. Swiss-Prot
Match: PRI1_HUMAN (DNA primase small subunit OS=Homo sapiens GN=PRIM1 PE=1 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 3.5e-93
Identity = 186/415 (44.82%), Postives = 265/415 (63.86%), Query Frame = 1


Query: 62  LKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRREFSFTLDNDIYLRFQSFNSLSEM 121
           LK+YY +LFP++ +++W++YG      G   +Y   REFSFTL +DIY+R+QSFN+ S++
Sbjct: 13  LKLYYRRLFPYSQYYRWLNYG------GVIKNYFQHREFSFTLKDDIYIRYQSFNNQSDL 72

Query: 122 ESSTKEKCPFKIDIGPVYSVDPAKRHAYAGANVFTPVERELVFDIDMTDYDDVRYCCSGA 181
           E   ++  P+KIDIG VYS  P  +H       F   E+ELVFDIDMTDYDDVR CCS A
Sbjct: 73  EKEMQKMNPYKIDIGAVYSHRP-NQHNTVKLGAFQAQEKELVFDIDMTDYDDVRRCCSSA 132

Query: 182 DVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAI 241
           D+C  CW LMT AI++ID  L++DFGF H LWV+SGRRGVHCWVCD   R+LS+  R+ I
Sbjct: 133 DICPKCWTLMTMAIRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSAVRSGI 192

Query: 242 ADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEVLKDSFESKLLCSQKIFSTEERYEKI 301
            +Y  L +G ++ +KK+ L+  + HPF+ +S I ++K  FE   L +Q I   +E ++KI
Sbjct: 193 VEYLSLVKGGQDVKKKVHLSEKI-HPFIRKS-INIIKKYFEEYALVNQDILENKESWDKI 252

Query: 302 LDMIHDESITSELRGRWQDNRRPSKNDVNLVRWEQLKNMLQSGKH--KSQGMRRHVE-EI 361
           L ++  E+I  EL+  +Q      K+  +L RWE LK +    ++  K+      +E EI
Sbjct: 253 LALV-PETIHDELQQSFQ------KSHNSLQRWEHLKKVASRYQNNIKNDKYGPWLEWEI 312

Query: 362 VFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDPERCDEFDPTTVPTVAQLLEE 421
           +  + +PRLD+ V+K +NHLLK+PF VHPKTGRI VPID ++ D+FDP TVPT++ +  E
Sbjct: 313 MLQYCFPRLDINVSKGINHLLKSPFSVHPKTGRISVPIDLQKVDQFDPFTVPTISFICRE 372

Query: 422 L------------NAADMEVDSET-DWDRTSLGESIRFFRSAFLQPLLKSCKEEI 461
           L            N A+ +V   T D+ +TSL   ++ F   FL+ L KS K E+
Sbjct: 373 LDAISTNEEEKEENEAESDVKHRTRDYKKTSLAPYVKVFEH-FLENLDKSRKGEL 410

[Close]

BLAST of CmaCh09G012900 vs. Swiss-Prot
Match: PRI1_MOUSE (DNA primase small subunit OS=Mus musculus GN=Prim1 PE=1 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 6.6e-92
Identity = 184/412 (44.66%), Postives = 260/412 (63.11%), Query Frame = 1


Query: 62  LKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRREFSFTLDNDIYLRFQSFNSLSEM 121
           LK+YY +LFP+A +++W++YG      G   +Y   REFSFTL +DIY+R+QSFN+ SE+
Sbjct: 13  LKLYYRRLFPYAQYYRWLNYG------GVTKNYFQHREFSFTLKDDIYIRYQSFNNQSEL 72

Query: 122 ESSTKEKCPFKIDIGPVYSVDPAKRHAYAGANVFTPVERELVFDIDMTDYDDVRYCCSGA 181
           E   ++  P+KIDIG VYS  P  +H       F   E+ELVFDIDMTDYDDVR CCS A
Sbjct: 73  EKEMQKMNPYKIDIGAVYSHRP-NQHNTVKLGAFQAQEKELVFDIDMTDYDDVRRCCSSA 132

Query: 182 DVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAI 241
           D+C  CW LMT A+++ID  L++DFGF H LWV+SGRRGVHCWVCD   R+LS+  R+ I
Sbjct: 133 DICSKCWTLMTMAMRIIDRALKEDFGFKHRLWVYSGRRGVHCWVCDESVRKLSSAVRSGI 192

Query: 242 ADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEVLKDSFESKLLCSQKIFSTEERYEKI 301
            +Y  L +G ++ +KK+ L   V HPF+ +S I ++K  FE   L  Q I   +E ++KI
Sbjct: 193 VEYLSLVKGGQDVKKKVHLNEKV-HPFVRKS-INIIKKYFEEYALVGQDILENKENWDKI 252

Query: 302 LDMIHDESITSELRGRWQDNRRPSKNDVNLVRWEQLKNMLQSGKH-KSQGMRRHVE-EIV 361
           L ++  E+I  EL+  +Q      K   +  RWE L+ +  S ++ K+      +E E++
Sbjct: 253 LALV-PETIHDELQRGFQ------KFHSSPQRWEHLRKVANSSQNMKNDKCGPWLEWEVM 312

Query: 362 FSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDPERCDEFDPTTVPTVAQLLEEL 421
             + +PRLD+ V+K +NHLLK+PF VHPKTGRI VPID  + D+FDP TVPT++ +  EL
Sbjct: 313 LQYCFPRLDVNVSKGVNHLLKSPFSVHPKTGRISVPIDFHKVDQFDPFTVPTISAICREL 372

Query: 422 NAA--------DMEVDSE---TDWDRTSLGESIRFFRSAFLQPLLKSCKEEI 461
           +          + E DS+     + +TSL   ++ F   FL+ L KS K E+
Sbjct: 373 DMVSTHEKEKEENEADSKHRVRGYKKTSLAPYVKVFEQ-FLENLDKSRKGEL 407

[Close]

BLAST of CmaCh09G012900 vs. Swiss-Prot
Match: PRI1_DROME (DNA primase small subunit OS=Drosophila melanogaster GN=DNApol-alpha50 PE=2 SV=2)

HSP 1 Score: 317.8 bits (813), Expect = 2.1e-85
Identity = 171/413 (41.40%), Postives = 237/413 (57.38%), Query Frame = 1


Query: 62  LKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRREFSFTLDNDIYLRFQSFNSLSEM 121
           L +YY +LFP   F++W+SYG+      S+ +    RE SFTL +DIY+R+  F++ +E+
Sbjct: 32  LPVYYRRLFPHLPFYRWLSYGS------SEDAIFSNREISFTLQDDIYIRYLCFDTQAEL 91

Query: 122 ESSTKEKCPFKIDIGPVYSVDPAKRHAYAGANVFTPVERELVFDIDMTDYDDVRYCCSGA 181
           E     + P KIDIGPV    P    +  G    TPV+RELVFDIDMTDYD+VR CCSGA
Sbjct: 92  EKEICSRNPIKIDIGPVMHSKPKNHRSIPGG--LTPVQRELVFDIDMTDYDEVRTCCSGA 151

Query: 182 DVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRGVHCWVCDGKARRLSNEQRAAI 241
            VCL CW  M  A +V+D  LR+DFGF HI+W+FSGRRG+HCWVCD +AR L    R A+
Sbjct: 152 GVCLKCWKFMVLAARVLDVALREDFGFEHIIWIFSGRRGIHCWVCDYQARHLDGRGRYAV 211

Query: 242 ADYFHL--YQGNENSRKKISLTGPVLHPFLARSYIEVLKDSFESKLLCSQKIFSTEERYE 301
           A+Y ++  Y             G   H  L R+ +++++  FE  +L  Q +F T +   
Sbjct: 212 AEYLNIITYASFAGGNSPRCSMGDRPHHSLKRA-LKIVEPMFEEIVLEDQNLFGTPKGVT 271

Query: 302 KILDMIHDESITSELRGRWQDNRRPSKNDVNLVRWEQLKNMLQSGKHK-----SQGMRRH 361
           K+L+M+HD++   EL    Q N     +  + + WE       S +       S+ ++  
Sbjct: 272 KLLNMVHDDAARGELESYMQKNLEDGAH--SRLVWESFIKYANSMRTSTTSAWSRKLKNI 331

Query: 362 VEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDPERCDEFDPTTVPTVAQ 421
           V EI     YPRLD+ VT+  NHLLKAPFC+HP TG++CVP       +FDPTTVPT+ Q
Sbjct: 332 VAEIQLGLLYPRLDINVTRGFNHLLKAPFCIHPATGKVCVPFSVSAVAKFDPTTVPTITQ 391

Query: 422 LLEELNAAD------MEVDSE----TDWDRTSLGESIRFFRSAFLQPLLKSCK 458
           LL E+NA D      ME   +     D  +TS+ + +  F   FL+ L +S K
Sbjct: 392 LLHEINAFDDKSKSYMEAPEDKSRIKDHKKTSMFKGVVVFEE-FLRKLERSQK 432

[Close]

BLAST of CmaCh09G012900 vs. Swiss-Prot
Match: PRI1_SCHPO (DNA primase small subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pri1 PE=1 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.2e-82
Identity = 164/393 (41.73%), Postives = 236/393 (60.05%), Query Frame = 1


Query: 38  ADMVIDGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYG----NDGKHPGSDHS 97
           A+  +DG +Q          D+  +  YY  LFP+   F+W+++G    ND  H      
Sbjct: 18  ANGTLDGAKQ-------GAVDSETMIQYYRHLFPWKYLFQWLNHGPVVTNDFAH------ 77

Query: 98  YVGRREFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYAGAN 157
               REF+FTL ND Y+R+ SF++  E++      CP + ++GPVYS +P  R      +
Sbjct: 78  ----REFAFTLPNDAYIRYLSFSNWEELKKEALNLCPSRFEVGPVYSANPRDRKTIR-KS 137

Query: 158 VFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILW 217
            F P+++ELVFDIDMTDYDDVR CCS  ++C  CWP +T A++V+D    +DFGF HILW
Sbjct: 138 TFHPLKKELVFDIDMTDYDDVRTCCSKTNICEKCWPFITIAVQVLDICFHEDFGFKHILW 197

Query: 218 VFSGRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKI--SLTGPVLHPFLAR 277
           V+SGRRG+H W+CD  A  L +  R  IA Y  +  GN     ++  +L  P LHP L R
Sbjct: 198 VYSGRRGIHAWICDEIACSLDDRSRRMIASYLQVVVGNPQGGVRLINNLKRP-LHPHLTR 257

Query: 278 SYIEVLKDSFESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQ-DNRRPSKNDVN 337
           S + +LK +F   +L  Q  ++++E  E +L ++ D+ + S LR +W+ D  R SKN   
Sbjct: 258 S-LNILKSAFVKIVLEDQDPWASKEGAENLLKLLPDKDLASALRKKWEVDPERSSKN--- 317

Query: 338 LVRWEQLKNMLQSGKHKS---QGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHP 397
             +W  +  +L SG   S     +    ++IV ++ YPRLD+EV++H+NHLLK+PFCVHP
Sbjct: 318 --KWSDIDTVLASGSIASISPSVIAIAKQDIVLTYLYPRLDVEVSRHLNHLLKSPFCVHP 377

Query: 398 KTGRICVPIDPERCDEFDPTTVPTVAQLLEELN 421
            T R+CVPID ER D F+P  VPTV  LL+EL+
Sbjct: 378 GTSRVCVPIDIERMDSFNPLKVPTVNDLLQELD 385

[Close]

BLAST of CmaCh09G012900 vs. Swiss-Prot
Match: PRI1_PLAF7 (DNA primase small subunit OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0366 PE=3 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 4.8e-74
Identity = 158/427 (37.00%), Postives = 243/427 (56.91%), Query Frame = 1


Query: 60  NYLKIYYGKLFPFADFFKWMSYGND--GKHPG-SDHSYVGRREFSFTLDN------DIYL 119
           N L  YY  L P  D + W++Y ND  GK+   +D  +  +REFSFT         +IY+
Sbjct: 17  NDLIFYYRSLCPINDLYNWLNYKNDIKGKYTKLNDPHFFSKREFSFTCKKSDQGKEEIYI 76

Query: 120 RFQSFNSLSEMESST-KEKCPFKIDIGPVYSVDPAKRHAYAGANVFTPVERELVFDIDMT 179
           R+ SF++  E ++    +  P K DIG +Y+  P  +    G ++F PV++EL+FDIDM 
Sbjct: 77  RWLSFSNPEEFKNKLLSDLVPIKFDIGAIYNF-PVSQKDQKG-DIFLPVQKELIFDIDMN 136

Query: 180 DYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRGVHCWVCDGK 239
           DYDD+R CC+   VC  CW  +T AI ++DT LR+DF F HILWV+SGRRG+HCWV D  
Sbjct: 137 DYDDIRTCCTDKKVCKLCWKFLTVAIVLLDTALREDFSFEHILWVYSGRRGIHCWVADES 196

Query: 240 ARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEVLKDSFESKLLCSQ 299
            R  + + RAA+ADY ++  G++  +KK+S+ G   +P   R++    K  +   L+  Q
Sbjct: 197 CRYYTTDARAALADYLNILSGSDTKKKKVSIWGKDKYPMFERAFDICYK--YFDVLMEEQ 256

Query: 300 KIFST-EERYEKILDMIHDES--ITSELRGRWQDNRRPSKNDVN------LVRWEQLKNM 359
             F       +K++D +   S  +T  L+    +  +   N+ N        ++  + N 
Sbjct: 257 DFFKKGSPHVQKLIDYLPYASGKVTDPLKAMKLNELKEYINNNNFNSREIFEKFSSIYNF 316

Query: 360 LQSGKHKSQ-------GMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRIC 419
           L    +  +        M   V+EIVF FTYPRLD+ V+K +NHLLK+PFC+H  TGR+C
Sbjct: 317 LTPSNYFKRKNVSGNINMPSFVKEIVFHFTYPRLDINVSKEINHLLKSPFCIHNSTGRVC 376

Query: 420 VPIDPERCDEFDPTTVPTVAQLLEEL-NAADMEVDSETDWDRTSLGESIRFFRSAFLQPL 460
           VP+D +  + F+P +VPT+  L E+  +  +  +++E   +RTSL   I +FR  F++ +
Sbjct: 377 VPLDIKNINNFNPQSVPTLKLLREQFDDPKNSHIEAE---NRTSLKPYIDYFRRHFIENI 436

[Close]

BLAST of CmaCh09G012900 vs. TrEMBL
Match: A0A0A0KUP7_CUCSA (DNA primase OS=Cucumis sativus GN=Csa_5G647410 PE=3 SV=1)

HSP 1 Score: 862.4 bits (2227), Expect = 2.5e-247
Identity = 413/447 (92.39%), Postives = 426/447 (95.30%), Query Frame = 1


Query: 31  AKMVHEAADMVIDGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGS 90
           A + +  +DMVIDGNEQKPKN VS+GFDANYLKIYYGKLFP+ADFFKWMSYGNDGKHPGS
Sbjct: 4   AAVENGGSDMVIDGNEQKPKNTVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDGKHPGS 63

Query: 91  DHSYVGRREFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYA 150
           D SY GRREFSFTLDNDIYLRFQSFN+LSEME S KEKCPFKIDIGPVYSVDPAKRHAYA
Sbjct: 64  DQSYFGRREFSFTLDNDIYLRFQSFNNLSEMEISIKEKCPFKIDIGPVYSVDPAKRHAYA 123

Query: 151 GANVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNH 210
             NVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVI TTLRDDFGFNH
Sbjct: 124 DDNVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIHTTLRDDFGFNH 183

Query: 211 ILWVFSGRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLA 270
           ILWVFSGRRGVHCWVCDGKARRLSNEQRAAIA+YFHLYQGNENSRKKISLTGPVLHPFL 
Sbjct: 184 ILWVFSGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLV 243

Query: 271 RSYIEVLKDSFESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPSKNDVN 330
           RSY EVLKDSFES+LLCSQKIFSTEERYEKILDMI DESITS+LRGRWQDNRR SKNDVN
Sbjct: 244 RSYTEVLKDSFESQLLCSQKIFSTEERYEKILDMIPDESITSDLRGRWQDNRRSSKNDVN 303

Query: 331 LVRWEQLKNMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTG 390
            +RWEQLK++LQSGKHK+QGMRRHVEEIVFSFTYPRLD EVTKHMNHLLKAPFCVHPKTG
Sbjct: 304 SLRWEQLKSLLQSGKHKAQGMRRHVEEIVFSFTYPRLDSEVTKHMNHLLKAPFCVHPKTG 363

Query: 391 RICVPIDPERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQ 450
           RICVPIDPE CDEFDPTTVPTVAQLLEELNAADMEVDSE DWDRTSLGESIRFFRSAFLQ
Sbjct: 364 RICVPIDPEHCDEFDPTTVPTVAQLLEELNAADMEVDSENDWDRTSLGESIRFFRSAFLQ 423

Query: 451 PLLKSCKEEIESSYNAKVQQSKNPLSW 478
           PLLKSCKEEIESSYNAKVQQSKN LSW
Sbjct: 424 PLLKSCKEEIESSYNAKVQQSKNSLSW 450

[Close]

BLAST of CmaCh09G012900 vs. TrEMBL
Match: M5WAI7_PRUPE (DNA primase OS=Prunus persica GN=PRUPE_ppa005529mg PE=3 SV=1)

HSP 1 Score: 742.7 bits (1916), Expect = 2.9e-211
Identity = 349/445 (78.43%), Postives = 397/445 (89.21%), Query Frame = 1


Query: 39  DMVIDGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRR 98
           DM+ID  EQK  N+V +GF+++YLK+YYGKLFP+AD FKWMSYGNDGKHP  D SY  RR
Sbjct: 12  DMMIDEYEQKQGNVVPDGFNSHYLKVYYGKLFPYADIFKWMSYGNDGKHPVCDQSYFSRR 71

Query: 99  EFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYA--GANVFT 158
           EFSFTLDN++YLRFQSFNS+SE+E+S KEKCP KIDIGPVYSVDP+KRHAYA  G NVFT
Sbjct: 72  EFSFTLDNEVYLRFQSFNSMSELENSVKEKCPVKIDIGPVYSVDPSKRHAYAQSGDNVFT 131

Query: 159 PVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFS 218
           PVEREL+FDIDM+DYDDVRYCCSGADVCL+CWPLMT A+KVIDT+LRDDFGF+HILWV+S
Sbjct: 132 PVERELIFDIDMSDYDDVRYCCSGADVCLECWPLMTIAVKVIDTSLRDDFGFSHILWVYS 191

Query: 219 GRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEV 278
           GRRGVHCWVCDGKARRL+NEQRAAIADYF +Y+GNENS KK+S TG  LHPFLARSY EV
Sbjct: 192 GRRGVHCWVCDGKARRLTNEQRAAIADYFRVYKGNENSHKKVSFTGLALHPFLARSYTEV 251

Query: 279 LKDSFESKLLCSQKIFSTEERYEKILDMI--HDESITSELRGRWQDNRRP--SKNDVNLV 338
           L D FE KLL SQ+IFSTEERYEKILDMI   D+SITSELRG+WQ+ RR   SK+D+N+V
Sbjct: 252 LMDFFERKLLLSQEIFSTEERYEKILDMIPDPDQSITSELRGKWQEKRRTANSKDDINVV 311

Query: 339 RWEQLKNMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRI 398
           RWEQLKNMLQSGKHK QG+RR VEEIVFSFTYPRLD+EV+KHMNHLLKAPFCVHPKTGR+
Sbjct: 312 RWEQLKNMLQSGKHKVQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRV 371

Query: 399 CVPIDPERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPL 458
           CVPIDP RC+EFDPT VPT++ LLE+LN   +  + + +WDRTSLG+SIRFFRS+FLQPL
Sbjct: 372 CVPIDPNRCEEFDPTAVPTLSNLLEQLNIGGLRAEVDNEWDRTSLGKSIRFFRSSFLQPL 431

Query: 459 LKSCKEEIESSYNAKVQQSKNPLSW 478
           LKSCKEE+ESSYNAK+QQSKN  SW
Sbjct: 432 LKSCKEEMESSYNAKLQQSKNSFSW 456

[Close]

BLAST of CmaCh09G012900 vs. TrEMBL
Match: A0A061GD75_THECC (DNA primase OS=Theobroma cacao GN=TCM_016451 PE=3 SV=1)

HSP 1 Score: 740.0 bits (1909), Expect = 1.9e-210
Identity = 351/443 (79.23%), Postives = 392/443 (88.49%), Query Frame = 1


Query: 39  DMVIDGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRR 98
           DM+IDG EQ   N V +GF+ANYL+IYYGKLFP AD FKWMSYGNDGKHP  D SY+GRR
Sbjct: 12  DMLIDGPEQA--NAVPDGFNANYLRIYYGKLFPHADIFKWMSYGNDGKHPACDKSYIGRR 71

Query: 99  EFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYA--GANVFT 158
           EFSFTL+NDIY+RFQSFNS SE+E+S KEKCPFKIDIGPVYSVDPAKRHAYA  G NVFT
Sbjct: 72  EFSFTLENDIYIRFQSFNSASELENSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGDNVFT 131

Query: 159 PVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFS 218
           PVERELVFDID+TDYDDVRYCC+GADVCL+CWPLMT AIKVIDT LRDDFGFNHILWV+S
Sbjct: 132 PVERELVFDIDITDYDDVRYCCTGADVCLECWPLMTIAIKVIDTALRDDFGFNHILWVYS 191

Query: 219 GRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEV 278
           GRRGVHCWVCDGKARRL+NEQRAAIADYF +YQGNENS KKISL G VLHPFLARSY EV
Sbjct: 192 GRRGVHCWVCDGKARRLTNEQRAAIADYFRVYQGNENSNKKISLPGHVLHPFLARSYTEV 251

Query: 279 LKDSFESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPS--KNDVNLVRW 338
           LK  FE+KLL +Q + S+EERYEKIL+MI D S+ +ELRGRWQ+ +R S  KND+N+VRW
Sbjct: 252 LKGFFEAKLLSNQNLLSSEERYEKILEMIPDGSVAAELRGRWQEKKRSSMLKNDINVVRW 311

Query: 339 EQLKNMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICV 398
           EQLK+ LQSGK K+QG+RR VEEIVFSFTYPRLD+EV+KHMNHLLKAPFCVHPKTGR+CV
Sbjct: 312 EQLKHALQSGKQKAQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCV 371

Query: 399 PIDPERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPLLK 458
           PIDP  CDEFDPT VPT++QLLEELN   +  D+E +WDRTSLGES+ FFRS+FL PLLK
Sbjct: 372 PIDPNNCDEFDPTKVPTLSQLLEELNRGGLRQDAEDEWDRTSLGESVTFFRSSFLHPLLK 431

Query: 459 SCKEEIESSYNAKVQQSKNPLSW 478
           SCKEEIESSYN K+QQ+KN LSW
Sbjct: 432 SCKEEIESSYNTKLQQAKNTLSW 452

[Close]

BLAST of CmaCh09G012900 vs. TrEMBL
Match: D7TVE8_VITVI (DNA primase OS=Vitis vinifera GN=VIT_02s0025g01350 PE=3 SV=1)

HSP 1 Score: 739.2 bits (1907), Expect = 3.2e-210
Identity = 345/439 (78.59%), Postives = 392/439 (89.29%), Query Frame = 1


Query: 43  DGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRREFSF 102
           +G E+  +N V +GF+ANYLK+YYGKLFP +D FKWMSYGNDGKHP  D SY+GRREFSF
Sbjct: 9   EGQEKMRENAVPDGFNANYLKVYYGKLFPHSDLFKWMSYGNDGKHPACDQSYIGRREFSF 68

Query: 103 TLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYA--GANVFTPVER 162
           TL +DIYLRFQSFNS+ EME+S KEKCPFKIDIGPVYSVDP KRHAYA  G NVFTPVER
Sbjct: 69  TLADDIYLRFQSFNSVHEMENSIKEKCPFKIDIGPVYSVDPTKRHAYAQSGDNVFTPVER 128

Query: 163 ELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRG 222
           ELVFDID+TDYDDVRYCCSGADVCLDCWPLMT AIKVIDT LRDDFGFNHILWV+SGRRG
Sbjct: 129 ELVFDIDITDYDDVRYCCSGADVCLDCWPLMTVAIKVIDTALRDDFGFNHILWVYSGRRG 188

Query: 223 VHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEVLKDS 282
           VHCWVCDG+ARRLSNEQRAAIADYF +Y+GNENS+KK+SL GP LHPFLARSY EVLKD 
Sbjct: 189 VHCWVCDGRARRLSNEQRAAIADYFRVYKGNENSQKKVSLVGPALHPFLARSYTEVLKDF 248

Query: 283 FESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRP--SKNDVNLVRWEQLK 342
           FE KLL  QK+FSTEERYEKIL +I DESITSELRG+WQ+NRR   SK D+N +RWEQLK
Sbjct: 249 FEEKLLPGQKLFSTEERYEKILKIIPDESITSELRGKWQENRRSSISKEDINAIRWEQLK 308

Query: 343 NMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDP 402
           +MLQSGK K+QG+RR VEEIVFS+TYPRLD+EV+KHMNHLLKAPFCVHPKTGR+CVPIDP
Sbjct: 309 HMLQSGKQKAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDP 368

Query: 403 ERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPLLKSCKE 462
           + C+EFDPT+VPT+++LLEELN      D++ +W+RTSLG+S++FFR +FLQPLLKSCKE
Sbjct: 369 KSCEEFDPTSVPTLSKLLEELNMGGFRADADDEWERTSLGKSVKFFRLSFLQPLLKSCKE 428

Query: 463 EIESSYNAKVQQSKNPLSW 478
           EIES+YNAK+Q SKN LSW
Sbjct: 429 EIESAYNAKLQLSKNSLSW 447

[Close]

BLAST of CmaCh09G012900 vs. TrEMBL
Match: A0A061G561_THECC (DNA primase OS=Theobroma cacao GN=TCM_016451 PE=3 SV=1)

HSP 1 Score: 735.3 bits (1897), Expect = 4.6e-209
Identity = 350/443 (79.01%), Postives = 392/443 (88.49%), Query Frame = 1


Query: 39  DMVIDGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRR 98
           DM+IDG EQ   N V +GF+ANYL+IYYGKLFP AD FKWMSYGNDGKHP  D SY+GRR
Sbjct: 12  DMLIDGPEQA--NAVPDGFNANYLRIYYGKLFPHADIFKWMSYGNDGKHPACDKSYIGRR 71

Query: 99  EFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYA--GANVFT 158
           EFSFTL+NDIY+RFQSFNS SE+E+S KEKCPFKIDIGPVYSVDPAKRHAYA  G NVFT
Sbjct: 72  EFSFTLENDIYIRFQSFNSASELENSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGDNVFT 131

Query: 159 PVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFS 218
           PVERELVFDID+TDYDDVRYCC+GADVCL+CWPLMT AIKVIDT LRDDFGFNHILWV+S
Sbjct: 132 PVERELVFDIDITDYDDVRYCCTGADVCLECWPLMTIAIKVIDTALRDDFGFNHILWVYS 191

Query: 219 GRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEV 278
           GRRGVHCWVCDGKARRL+NEQRAAIADYF +YQGNENS KKISL G VLHPFLARSY EV
Sbjct: 192 GRRGVHCWVCDGKARRLTNEQRAAIADYFRVYQGNENSNKKISLPGHVLHPFLARSYTEV 251

Query: 279 LKDSFESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPS--KNDVNLVRW 338
           LK  FE+KLL +Q + S+EERYEKIL+MI D ++ +ELRGRWQ+ +R S  KND+N+VRW
Sbjct: 252 LKGFFEAKLLSNQNLLSSEERYEKILEMIPD-AVAAELRGRWQEKKRSSMLKNDINVVRW 311

Query: 339 EQLKNMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICV 398
           EQLK+ LQSGK K+QG+RR VEEIVFSFTYPRLD+EV+KHMNHLLKAPFCVHPKTGR+CV
Sbjct: 312 EQLKHALQSGKQKAQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCV 371

Query: 399 PIDPERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPLLK 458
           PIDP  CDEFDPT VPT++QLLEELN   +  D+E +WDRTSLGES+ FFRS+FL PLLK
Sbjct: 372 PIDPNNCDEFDPTKVPTLSQLLEELNRGGLRQDAEDEWDRTSLGESVTFFRSSFLHPLLK 431

Query: 459 SCKEEIESSYNAKVQQSKNPLSW 478
           SCKEEIESSYN K+QQ+KN LSW
Sbjct: 432 SCKEEIESSYNTKLQQAKNTLSW 451

[Close]

BLAST of CmaCh09G012900 vs. TAIR10
Match: AT5G41880.1 (AT5G41880.1 DNA primases;DNA primases)

HSP 1 Score: 620.2 bits (1598), Expect = 1.1e-177
Identity = 290/444 (65.32%), Postives = 362/444 (81.53%), Query Frame = 1


Query: 39  DMVIDGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRR 98
           DM+ID  + KPK  + N F+ +YL+IYYG LFP+ D  KW+SYG+DGKHPG D  Y GRR
Sbjct: 12  DMMID--DPKPK--IENDFNVHYLRIYYGNLFPYTDIHKWLSYGHDGKHPGCDEYYFGRR 71

Query: 99  EFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYA--GANVFT 158
           EFSFTL+ND+YLR++SF + S ME++ K   P+KIDIG VYSVDP KRHAYA  G N+FT
Sbjct: 72  EFSFTLENDVYLRYKSFKNASLMEAAIKSNFPYKIDIGAVYSVDPDKRHAYAQSGTNLFT 131

Query: 159 PVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFS 218
           PVERELVFDID+TDYDDVRYCCSGADVC  CWPLMT AIKVIDT+LR+DFGF HILWVFS
Sbjct: 132 PVERELVFDIDITDYDDVRYCCSGADVCSKCWPLMTVAIKVIDTSLREDFGFKHILWVFS 191

Query: 219 GRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEV 278
           GRRGVHCWVCD KARRL+NEQR+A+A+YF +Y+GNEN+ KK+ L G  LHPFLARSY++ 
Sbjct: 192 GRRGVHCWVCDAKARRLTNEQRSAVAEYFRVYKGNENNAKKVDLMGHSLHPFLARSYVDF 251

Query: 279 LKDSFESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPSKND--VNLVRW 338
           +K  FE +L  +Q IFS++E+YEKIL MI DE I ++LRG+W+++ R S ++   +L+RW
Sbjct: 252 IKSFFEGELQATQSIFSSKEKYEKILGMITDEDIQADLRGKWENSARSSLSEEATSLLRW 311

Query: 339 EQLKNMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICV 398
           EQLK  LQS ++K+  +R  VEEIVF+FTYPR+DLEV+K MNHLLKAPFCVHPKTGR+CV
Sbjct: 312 EQLKKALQSKRNKALSLRTCVEEIVFTFTYPRIDLEVSKQMNHLLKAPFCVHPKTGRVCV 371

Query: 399 PIDPERCDEFDPTTVPTVAQLLEELNAADMEVD-SETDWDRTSLGESIRFFRSAFLQPLL 458
           PIDP  CDEFDP  VPT++QL+EE+N+  + +D  + D D + LG+SI+FFRS+FL+PLL
Sbjct: 372 PIDPNNCDEFDPLAVPTLSQLIEEINSGGLRMDVDDDDSDSSLLGKSIKFFRSSFLEPLL 431

Query: 459 KSCKEEIESSYNAKVQQSKNPLSW 478
           KSCKEEIESSY  K+ ++K+  SW
Sbjct: 432 KSCKEEIESSYKTKIAKTKDSFSW 451

[Close]

BLAST of CmaCh09G012900 vs. NCBI nr
Match: gi|449447727|ref|XP_004141619.1| (PREDICTED: DNA primase small subunit [Cucumis sativus])

HSP 1 Score: 862.4 bits (2227), Expect = 3.6e-247
Identity = 413/447 (92.39%), Postives = 426/447 (95.30%), Query Frame = 1


Query: 31  AKMVHEAADMVIDGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGS 90
           A + +  +DMVIDGNEQKPKN VS+GFDANYLKIYYGKLFP+ADFFKWMSYGNDGKHPGS
Sbjct: 4   AAVENGGSDMVIDGNEQKPKNTVSDGFDANYLKIYYGKLFPYADFFKWMSYGNDGKHPGS 63

Query: 91  DHSYVGRREFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYA 150
           D SY GRREFSFTLDNDIYLRFQSFN+LSEME S KEKCPFKIDIGPVYSVDPAKRHAYA
Sbjct: 64  DQSYFGRREFSFTLDNDIYLRFQSFNNLSEMEISIKEKCPFKIDIGPVYSVDPAKRHAYA 123

Query: 151 GANVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNH 210
             NVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVI TTLRDDFGFNH
Sbjct: 124 DDNVFTPVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIHTTLRDDFGFNH 183

Query: 211 ILWVFSGRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLA 270
           ILWVFSGRRGVHCWVCDGKARRLSNEQRAAIA+YFHLYQGNENSRKKISLTGPVLHPFL 
Sbjct: 184 ILWVFSGRRGVHCWVCDGKARRLSNEQRAAIAEYFHLYQGNENSRKKISLTGPVLHPFLV 243

Query: 271 RSYIEVLKDSFESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPSKNDVN 330
           RSY EVLKDSFES+LLCSQKIFSTEERYEKILDMI DESITS+LRGRWQDNRR SKNDVN
Sbjct: 244 RSYTEVLKDSFESQLLCSQKIFSTEERYEKILDMIPDESITSDLRGRWQDNRRSSKNDVN 303

Query: 331 LVRWEQLKNMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTG 390
            +RWEQLK++LQSGKHK+QGMRRHVEEIVFSFTYPRLD EVTKHMNHLLKAPFCVHPKTG
Sbjct: 304 SLRWEQLKSLLQSGKHKAQGMRRHVEEIVFSFTYPRLDSEVTKHMNHLLKAPFCVHPKTG 363

Query: 391 RICVPIDPERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQ 450
           RICVPIDPE CDEFDPTTVPTVAQLLEELNAADMEVDSE DWDRTSLGESIRFFRSAFLQ
Sbjct: 364 RICVPIDPEHCDEFDPTTVPTVAQLLEELNAADMEVDSENDWDRTSLGESIRFFRSAFLQ 423

Query: 451 PLLKSCKEEIESSYNAKVQQSKNPLSW 478
           PLLKSCKEEIESSYNAKVQQSKN LSW
Sbjct: 424 PLLKSCKEEIESSYNAKVQQSKNSLSW 450

[Close]

BLAST of CmaCh09G012900 vs. NCBI nr
Match: gi|595846410|ref|XP_007209127.1| (hypothetical protein PRUPE_ppa005529mg [Prunus persica])

HSP 1 Score: 742.7 bits (1916), Expect = 4.1e-211
Identity = 349/445 (78.43%), Postives = 397/445 (89.21%), Query Frame = 1


Query: 39  DMVIDGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRR 98
           DM+ID  EQK  N+V +GF+++YLK+YYGKLFP+AD FKWMSYGNDGKHP  D SY  RR
Sbjct: 12  DMMIDEYEQKQGNVVPDGFNSHYLKVYYGKLFPYADIFKWMSYGNDGKHPVCDQSYFSRR 71

Query: 99  EFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYA--GANVFT 158
           EFSFTLDN++YLRFQSFNS+SE+E+S KEKCP KIDIGPVYSVDP+KRHAYA  G NVFT
Sbjct: 72  EFSFTLDNEVYLRFQSFNSMSELENSVKEKCPVKIDIGPVYSVDPSKRHAYAQSGDNVFT 131

Query: 159 PVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFS 218
           PVEREL+FDIDM+DYDDVRYCCSGADVCL+CWPLMT A+KVIDT+LRDDFGF+HILWV+S
Sbjct: 132 PVERELIFDIDMSDYDDVRYCCSGADVCLECWPLMTIAVKVIDTSLRDDFGFSHILWVYS 191

Query: 219 GRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEV 278
           GRRGVHCWVCDGKARRL+NEQRAAIADYF +Y+GNENS KK+S TG  LHPFLARSY EV
Sbjct: 192 GRRGVHCWVCDGKARRLTNEQRAAIADYFRVYKGNENSHKKVSFTGLALHPFLARSYTEV 251

Query: 279 LKDSFESKLLCSQKIFSTEERYEKILDMI--HDESITSELRGRWQDNRRP--SKNDVNLV 338
           L D FE KLL SQ+IFSTEERYEKILDMI   D+SITSELRG+WQ+ RR   SK+D+N+V
Sbjct: 252 LMDFFERKLLLSQEIFSTEERYEKILDMIPDPDQSITSELRGKWQEKRRTANSKDDINVV 311

Query: 339 RWEQLKNMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRI 398
           RWEQLKNMLQSGKHK QG+RR VEEIVFSFTYPRLD+EV+KHMNHLLKAPFCVHPKTGR+
Sbjct: 312 RWEQLKNMLQSGKHKVQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRV 371

Query: 399 CVPIDPERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPL 458
           CVPIDP RC+EFDPT VPT++ LLE+LN   +  + + +WDRTSLG+SIRFFRS+FLQPL
Sbjct: 372 CVPIDPNRCEEFDPTAVPTLSNLLEQLNIGGLRAEVDNEWDRTSLGKSIRFFRSSFLQPL 431

Query: 459 LKSCKEEIESSYNAKVQQSKNPLSW 478
           LKSCKEE+ESSYNAK+QQSKN  SW
Sbjct: 432 LKSCKEEMESSYNAKLQQSKNSFSW 456

[Close]

BLAST of CmaCh09G012900 vs. NCBI nr
Match: gi|645267384|ref|XP_008239045.1| (PREDICTED: DNA primase small subunit [Prunus mume])

HSP 1 Score: 741.1 bits (1912), Expect = 1.2e-210
Identity = 348/445 (78.20%), Postives = 397/445 (89.21%), Query Frame = 1


Query: 39  DMVIDGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRR 98
           DM+ID  EQK  N+V +GF+++YLK+YYGKLFP+AD FKWMSYGNDGKHP  D SY  RR
Sbjct: 12  DMMIDEYEQKQGNVVPDGFNSHYLKVYYGKLFPYADIFKWMSYGNDGKHPACDQSYFSRR 71

Query: 99  EFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYA--GANVFT 158
           EFSFTLDN++YLRFQSFNS+SE+E+S KEKCP KIDIGPVYSVDP+KRHAYA  G NVFT
Sbjct: 72  EFSFTLDNEVYLRFQSFNSMSELENSVKEKCPVKIDIGPVYSVDPSKRHAYAQSGDNVFT 131

Query: 159 PVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFS 218
           PVEREL+FDIDM+DYDDVRYCCSGADVCL+CWPLMT AIKVIDT+LRDDFGF+HILWV+S
Sbjct: 132 PVERELIFDIDMSDYDDVRYCCSGADVCLECWPLMTIAIKVIDTSLRDDFGFSHILWVYS 191

Query: 219 GRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEV 278
           GRRGVHCWVCDGKARRL+NEQRAAIADYF +Y+GNENS KK+S TG  LHPFLARSY EV
Sbjct: 192 GRRGVHCWVCDGKARRLTNEQRAAIADYFRVYKGNENSHKKVSFTGLALHPFLARSYTEV 251

Query: 279 LKDSFESKLLCSQKIFSTEERYEKILDMI--HDESITSELRGRWQDNRRP--SKNDVNLV 338
           L D FE KLL SQ+IFSTEERYEKILDMI   D+SITSELRG+WQ+ RR   SK+D+N++
Sbjct: 252 LMDFFERKLLLSQEIFSTEERYEKILDMIPDPDQSITSELRGKWQEKRRTANSKDDINVL 311

Query: 339 RWEQLKNMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRI 398
           RWEQLKN+LQSGKHK QG+RR VEEIVFSFTYPRLD+EV+KHMNHLLKAPFCVHPKTGR+
Sbjct: 312 RWEQLKNVLQSGKHKVQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRV 371

Query: 399 CVPIDPERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPL 458
           CVPIDP RC+EFDPT VPT++ LLE+LN   +  + + DWDRTSLG+SIRFFRS+FLQPL
Sbjct: 372 CVPIDPNRCEEFDPTAVPTLSNLLEQLNIGGLRAEVDNDWDRTSLGKSIRFFRSSFLQPL 431

Query: 459 LKSCKEEIESSYNAKVQQSKNPLSW 478
           LKSCKEE+ESSY+AK+QQSKN  SW
Sbjct: 432 LKSCKEEMESSYSAKLQQSKNSFSW 456

[Close]

BLAST of CmaCh09G012900 vs. NCBI nr
Match: gi|590679147|ref|XP_007040498.1| (DNA primase isoform 1 [Theobroma cacao])

HSP 1 Score: 740.0 bits (1909), Expect = 2.7e-210
Identity = 351/443 (79.23%), Postives = 392/443 (88.49%), Query Frame = 1


Query: 39  DMVIDGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRR 98
           DM+IDG EQ   N V +GF+ANYL+IYYGKLFP AD FKWMSYGNDGKHP  D SY+GRR
Sbjct: 12  DMLIDGPEQA--NAVPDGFNANYLRIYYGKLFPHADIFKWMSYGNDGKHPACDKSYIGRR 71

Query: 99  EFSFTLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYA--GANVFT 158
           EFSFTL+NDIY+RFQSFNS SE+E+S KEKCPFKIDIGPVYSVDPAKRHAYA  G NVFT
Sbjct: 72  EFSFTLENDIYIRFQSFNSASELENSIKEKCPFKIDIGPVYSVDPAKRHAYAQSGDNVFT 131

Query: 159 PVERELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFS 218
           PVERELVFDID+TDYDDVRYCC+GADVCL+CWPLMT AIKVIDT LRDDFGFNHILWV+S
Sbjct: 132 PVERELVFDIDITDYDDVRYCCTGADVCLECWPLMTIAIKVIDTALRDDFGFNHILWVYS 191

Query: 219 GRRGVHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEV 278
           GRRGVHCWVCDGKARRL+NEQRAAIADYF +YQGNENS KKISL G VLHPFLARSY EV
Sbjct: 192 GRRGVHCWVCDGKARRLTNEQRAAIADYFRVYQGNENSNKKISLPGHVLHPFLARSYTEV 251

Query: 279 LKDSFESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRPS--KNDVNLVRW 338
           LK  FE+KLL +Q + S+EERYEKIL+MI D S+ +ELRGRWQ+ +R S  KND+N+VRW
Sbjct: 252 LKGFFEAKLLSNQNLLSSEERYEKILEMIPDGSVAAELRGRWQEKKRSSMLKNDINVVRW 311

Query: 339 EQLKNMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICV 398
           EQLK+ LQSGK K+QG+RR VEEIVFSFTYPRLD+EV+KHMNHLLKAPFCVHPKTGR+CV
Sbjct: 312 EQLKHALQSGKQKAQGLRRCVEEIVFSFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCV 371

Query: 399 PIDPERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPLLK 458
           PIDP  CDEFDPT VPT++QLLEELN   +  D+E +WDRTSLGES+ FFRS+FL PLLK
Sbjct: 372 PIDPNNCDEFDPTKVPTLSQLLEELNRGGLRQDAEDEWDRTSLGESVTFFRSSFLHPLLK 431

Query: 459 SCKEEIESSYNAKVQQSKNPLSW 478
           SCKEEIESSYN K+QQ+KN LSW
Sbjct: 432 SCKEEIESSYNTKLQQAKNTLSW 452

[Close]

BLAST of CmaCh09G012900 vs. NCBI nr
Match: gi|297742324|emb|CBI34473.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 739.2 bits (1907), Expect = 4.6e-210
Identity = 345/439 (78.59%), Postives = 392/439 (89.29%), Query Frame = 1


Query: 43  DGNEQKPKNIVSNGFDANYLKIYYGKLFPFADFFKWMSYGNDGKHPGSDHSYVGRREFSF 102
           +G E+  +N V +GF+ANYLK+YYGKLFP +D FKWMSYGNDGKHP  D SY+GRREFSF
Sbjct: 9   EGQEKMRENAVPDGFNANYLKVYYGKLFPHSDLFKWMSYGNDGKHPACDQSYIGRREFSF 68

Query: 103 TLDNDIYLRFQSFNSLSEMESSTKEKCPFKIDIGPVYSVDPAKRHAYA--GANVFTPVER 162
           TL +DIYLRFQSFNS+ EME+S KEKCPFKIDIGPVYSVDP KRHAYA  G NVFTPVER
Sbjct: 69  TLADDIYLRFQSFNSVHEMENSIKEKCPFKIDIGPVYSVDPTKRHAYAQSGDNVFTPVER 128

Query: 163 ELVFDIDMTDYDDVRYCCSGADVCLDCWPLMTAAIKVIDTTLRDDFGFNHILWVFSGRRG 222
           ELVFDID+TDYDDVRYCCSGADVCLDCWPLMT AIKVIDT LRDDFGFNHILWV+SGRRG
Sbjct: 129 ELVFDIDITDYDDVRYCCSGADVCLDCWPLMTVAIKVIDTALRDDFGFNHILWVYSGRRG 188

Query: 223 VHCWVCDGKARRLSNEQRAAIADYFHLYQGNENSRKKISLTGPVLHPFLARSYIEVLKDS 282
           VHCWVCDG+ARRLSNEQRAAIADYF +Y+GNENS+KK+SL GP LHPFLARSY EVLKD 
Sbjct: 189 VHCWVCDGRARRLSNEQRAAIADYFRVYKGNENSQKKVSLVGPALHPFLARSYTEVLKDF 248

Query: 283 FESKLLCSQKIFSTEERYEKILDMIHDESITSELRGRWQDNRRP--SKNDVNLVRWEQLK 342
           FE KLL  QK+FSTEERYEKIL +I DESITSELRG+WQ+NRR   SK D+N +RWEQLK
Sbjct: 249 FEEKLLPGQKLFSTEERYEKILKIIPDESITSELRGKWQENRRSSISKEDINAIRWEQLK 308

Query: 343 NMLQSGKHKSQGMRRHVEEIVFSFTYPRLDLEVTKHMNHLLKAPFCVHPKTGRICVPIDP 402
           +MLQSGK K+QG+RR VEEIVFS+TYPRLD+EV+KHMNHLLKAPFCVHPKTGR+CVPIDP
Sbjct: 309 HMLQSGKQKAQGLRRCVEEIVFSYTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDP 368

Query: 403 ERCDEFDPTTVPTVAQLLEELNAADMEVDSETDWDRTSLGESIRFFRSAFLQPLLKSCKE 462
           + C+EFDPT+VPT+++LLEELN      D++ +W+RTSLG+S++FFR +FLQPLLKSCKE
Sbjct: 369 KSCEEFDPTSVPTLSKLLEELNMGGFRADADDEWERTSLGKSVKFFRLSFLQPLLKSCKE 428

Query: 463 EIESSYNAKVQQSKNPLSW 478
           EIES+YNAK+Q SKN LSW
Sbjct: 429 EIESAYNAKLQLSKNSLSW 447

The following BLAST results are available for this feature:

BLAST of CmaCh09G012900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRI1_HUMAN	3.5e-93	44.82	DNA primase small subunit OS=Homo sapiens GN=PRIM1 PE=1 SV=1	[more]
PRI1_MOUSE	6.6e-92	44.66	DNA primase small subunit OS=Mus musculus GN=Prim1 PE=1 SV=1	[more]
PRI1_DROME	2.1e-85	41.40	DNA primase small subunit OS=Drosophila melanogaster GN=DNApol-alpha50 PE=2 SV=2	[more]
PRI1_SCHPO	1.2e-82	41.73	DNA primase small subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)...	[more]
PRI1_PLAF7	4.8e-74	37.00	DNA primase small subunit OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0366 PE...	[more]

BLAST of CmaCh09G012900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUP7_CUCSA	2.5e-247	92.39	DNA primase OS=Cucumis sativus GN=Csa_5G647410 PE=3 SV=1	[more]
M5WAI7_PRUPE	2.9e-211	78.43	DNA primase OS=Prunus persica GN=PRUPE_ppa005529mg PE=3 SV=1	[more]
A0A061GD75_THECC	1.9e-210	79.23	DNA primase OS=Theobroma cacao GN=TCM_016451 PE=3 SV=1	[more]
D7TVE8_VITVI	3.2e-210	78.59	DNA primase OS=Vitis vinifera GN=VIT_02s0025g01350 PE=3 SV=1	[more]
A0A061G561_THECC	4.6e-209	79.01	DNA primase OS=Theobroma cacao GN=TCM_016451 PE=3 SV=1	[more]

BLAST of CmaCh09G012900 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41880.1	1.1e-177	65.32	DNA primases;DNA primases	[more]

BLAST of CmaCh09G012900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447727\|ref\|XP_004141619.1\|	3.6e-247	92.39	PREDICTED: DNA primase small subunit [Cucumis sativus]	[more]
gi\|595846410\|ref\|XP_007209127.1\|	4.1e-211	78.43	hypothetical protein PRUPE_ppa005529mg [Prunus persica]	[more]
gi\|645267384\|ref\|XP_008239045.1\|	1.2e-210	78.20	PREDICTED: DNA primase small subunit [Prunus mume]	[more]
gi\|590679147\|ref\|XP_007040498.1\|	2.7e-210	79.23	DNA primase isoform 1 [Theobroma cacao]	[more]
gi\|297742324\|emb\|CBI34473.3\|	4.6e-210	78.59	unnamed protein product [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002755	DNA_primase_S
IPR014052	DNA_primase_ssu_euk/arc

Vocabulary: **Biological Process**
Term	Definition
GO:0006269	DNA replication, synthesis of RNA primer

Vocabulary: **Molecular Function**
Term	Definition
GO:0003896	DNA primase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006269	DNA replication, synthesis of RNA primer
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005730	nucleolus
cellular_component	GO:1990077	primosome complex
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005657	replication fork
molecular_function	GO:0003896	DNA primase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G012900.1	CmaCh09G012900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002755	DNA primase, small subunit	PFAM	PF01896	DNA_primase_S	coord: 164..398 score: 1.5
IPR014052	DNA primase, small subunit, eukaryotic/archaeal	PANTHER	PTHR10536	DNA PRIMASE SMALL SUBUNIT	coord: 51..473 score: 2.7E
IPR014052	DNA primase, small subunit, eukaryotic/archaeal	TIGRFAMs	TIGR00335	TIGR00335	coord: 63..415 score: 4.0
None	No IPR available	GENE3D	G3DSA:3.90.920.10		coord: 367..425 score: 9.4E-97coord: 58..246 score: 9.4
None	No IPR available	unknown	SSF56747	Prim-pol domain	coord: 58..423 score: 4.58E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G012900	Cucsa.237650	Cucumber (Gy14) v1	cgycmaB0659
CmaCh09G012900	Cla012411	Watermelon (97103) v1	cmawmB022
CmaCh09G012900	Csa5G647410	Cucumber (Chinese Long) v2	cmacuB029
CmaCh09G012900	ClCG08G001530	Watermelon (Charleston Gray)	cmawcgB036
CmaCh09G012900	CSPI05G30490	Wild cucumber (PI 183967)	cmacpiB029
CmaCh09G012900	CmoCh09G012480	Cucurbita moschata (Rifu)	cmacmoB028
CmaCh09G012900	Lsi08G001560	Bottle gourd (USVL1VR-Ls)	cmalsiB038
CmaCh09G012900	Cp4.1LG06g09460	Cucurbita pepo (Zucchini)	cmacpeB061
CmaCh09G012900	CsaV3_5G039570	Cucumber (Chinese Long) v3	cmacucB0036
CmaCh09G012900	Cla97C08G145740	Watermelon (97103) v2	cmawmbB042
CmaCh09G012900	Bhi06G000140	Wax gourd	cmawgoB0009
CmaCh09G012900	CsGy5G029880	Cucumber (Gy14) v2	cgybcmaB578
CmaCh09G012900	Carg24114	Silver-seed gourd	carcmaB0953

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G012900	Cucurbita maxima (Rimu)	cmacmaB057
CmaCh09G012900	Cucurbita moschata (Rifu)	cmacmoB054
CmaCh09G012900	Melon (DHL92) v3.5.1	cmameB010
CmaCh09G012900	Melon (DHL92) v3.5.1	cmameB012
CmaCh09G012900	Cucurbita pepo (Zucchini)	cmacpeB051
CmaCh09G012900	Melon (DHL92) v3.6.1	cmamedB013
CmaCh09G012900	Silver-seed gourd	carcmaB0218