CmaCh09G012780 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCTCCTCAACTAACCCATTTACTCTCCACAAGCAACTACACTGCGCGTCTTTGTCCGCCACCGCCACCACCAAATGCGGTGGCCGGCCTCGAAGACTGGCGGGCTTGGCCTCATTGCCATATCATACATCTCCATTGACTACCTCAGCCACCTCTCGCCGGCATGGCATGCCCGTCTCCAGCCAGCTCTTTGGTCCCTTCTTGCCCTTGCCGCCGTCGTTCGTGTTCCCTTCTACAAGCACTGGTCCTCCGAGTTCCGTTCCGCCATTCCATTTCTCTCCTCCATGCTCTTCATGCTCGCCACTCTGCTCTTTGAAGCTCTTTCCGTTCGTTTCGTCACCGCCGTCCTCGGTCTTGATTGGCACAGGTGACTCTAAGATCTGGATTTCTCTCTTTTGTGATACGTCTGTTAGCAGATAAAAAATAGTTGTGGATTTCTTGAATGATCAAGTTTGATTTCGACTTGGAGGTATCAGATCGACTTCTGATTTTTGAGCTGCGAAAACCTAAAATTAATTCCTCATCATATTAGATGTTTATGTTTAGGTGCGATTCTGCGTATCTGCGTTAATTAACTTGCCAGATTTGGAATATTTTTCATTTTCTTGTGTGAATCAAGAGATTGAGGATGGATCTGATATTTTTGGAGAGTAGTTTAGCTTGAGTTAACGGATTTCAAACTTCACGAAGGCGTTGACTGAATCTTTTTAAAAGCATTTATAACCTGATTGTTAGTGTAATTATGAGACAGAAATGGCTTACCCGTTTTTTGTAAAGGATTTCTGATTTTAGATCCATAATCGTTTCATAGCTCATTAGATTTGGTTTCTATCACAAATGGAAAGAGATCTGGCTAATAAATTCATTTTTTGCTCCCCGTATATTGACATTTTCCTATTCCTGTCAGAACCAAGTTTAGATGTTGCAGAGCGTCAGCCAATTGGTGTTCTTATTTTCATTTTGTAAAGATGGGTCTCACTTTGTTTCTTTTTTTGGATCTTAAATTAATGCTGCCCATAATGCTTCCTGTTGCATCCGTTATTGGTGGACTAATGGCTTTTCATCCATTTATTTAATCTAGTTCCTATGTTTATTTATAATATATTATGAAATTAACGAGATGCATTGAATGTGGATGAACGTTGATGCAGCCATTATGTTTAAAGAAGTCTACAAAGTCCTTGCTAGTTAGTTTTGAGGATTGATTCTTGCAAGAACTAGCAAGATTTTGATTAATCAGAGTAATTTCGATCTTGCCAACAAACATATTTGCATGTGTTTAGTAGTCTTTTTGATACCCAGTTTTGTTTTTGTTCTGTAGCAATTCAAGATCGTATTAGTAGATCAATCTTTTGTTATGATATACAGTAGATCAATCTTTTGTTATGATATACAGTAGATCAATCTTTTGTTATGATATACAGTGTGAGATCCCACATTGATTGGGGAGGAGAATGAAACATTCTTTATAAGGGCGTAGAAACCTCTCCCTAGTAGACGCGTTTTAAAAACCTTTAGATGAAGCCCGAAAGGGAAAGCTAAAAAGGACAATATTTGCTAGCGGTGGGCTTTGACCATTACAAATGGTATCAGAGCGAGACATTAAGCGATGTGTCAGCGAGGAGGTTGAGCCTCAAAGGGGGTTACACGAGATGGTGTGCCAGCAAGGATGTCGAAGGGGGGGAGTGGATTGGGGGGTCCCACATCGATTTGAGAAGGGAACGAGTGTCAGCGAGGATGCTGGGCTCCGAAAGAGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAATGAAACATTCTTTATAAGGGTGTGGAAATCTCCCCATAGCAAACACGTTTTAAAAACCTTTAGGGGAAGCTTAAAAGGGAAATTTAAAAAGGACAATATCTGCTAGCGGTGGGCTTGAGCCATTACATACGAACTTCCATTACAGCATAAAGCTGGAATGAAACTTTCAAAAGATCTATTTTCTGTTGCTCATTAACAAATATGCAGTTTCATTCCCCTGTTGGTTTTGTTTTCAGTTCAATTTCTAAGATCGTGACTTTCTTGACATTTGACAGTGACACATCTCCTCTTCCTGATACGGGCCAATGGCTTCTCCTGGCGTTGAACGAGAAACTTCCTCATACTGTTGTGGAGATATTGAGAGCTCGGATTATTGGATTGCATCACTTCCTGATGTTGTTCATTATGCTTGCATTCTCTGTGCTGTTTGGCTCAGTAAAAGCTCCTGGACTCGGATTAGGTGCGAGGTATATGTTCACCATGGCAATTGGCCGACTTCTTAGAGCCATAACTTTTGTATCTACAATTCTGCCATCTGCAAGGCCATGGTGTGCCTATACTCGATTCCGAGTCCCAGCATATCCTCATCGTTGGGCACAGAAGTACTATGTTCCTTATGCTGAAGATGCTGATACAATTCGCCAGTTAATAAATCAGGACACAGCTTTTGGTAAGTGACTAACTGAAAACCATCATATTTAAGAGCAATTTAATGCTGCATTTTTTAAAATGTTAAGCACTCGAACTGCTTTGTAAGAAAATACTTGTCACTTTCATTGTGAGATCTCACGTTGATTGGAGAGGAGAATGAAGTATTCCTTATGTGTGTGGAAACTTCTCCCTAGCAGACGCATTTTAAAACCTTAAGGAGAAGCCCGGAAGGGAAAGCCTAAAGAGGACAATATCTGCTAGCAGTGGGCCTAGGCTATTACAAATGGTATTAGAGCCGGGTAGTGTGCCACCGAGGATTCTAAGCCCCCAAGGAGGGTGGATTGTGAGATCCCCACATTGGTTGGAAAGGGGAATGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACGTGTTTTAAAATCTTAAGGGAAAGCCCAAAGAGGACAATATTTGCTAACGGTGAGCCTTGACTATTACATTCATAATACTCAACGTAGAACCAAACATCAAGATTCGATGATGATTTGTTATTGAGATGTATTAGCTTTGTAGAAGATAGTTTGCACATAATGAATTCAAATTTCTCTATTTTCTGAGTTAACGTGTAAAATGTTTTCCCAGCTGATCCGGGACAGATTCTTGGTGACTTCAGACCTGATTGGGGTAAAATGAGCTTCTTAATAGATTTCCTACGACCAACACCCTCTGAAGGATCTTCTTGGTACAATGTACTTAAGAAGGCCGGGGGTGGCTGCAACGACCTTGTATACAGCGGCCACATGCTCGTTGCCGTGCTCACGGCCATGGCCTGGACGGTATAAACTCTAGTGTGCAATGTGTTGATGTGATATATTGTTCTTTTCTTGGCTAATATATGCACTGAAACAGGAGGCTTATGGAGGTCTTAGCTCAGCAGTTGTATGGTTTTTTGTAATACACAGCGCTCAACGTGAAATACGAGAACGCCACCATTACTCTGTCGATTGTGTTGTTGCAATATACGTTGGCATCCTCTTATGGAAAATGACTGGTTTCATTTGGTCAGCGAAAGACGTCGTGAAACGAAAGAGGCTAGCAAAGTTGGAGAAAATTCAAAGTAAACTGGTACAAGCTGCAAAAGATGCAGACATTGATGAAGTTAGAGAACTTCTAAAAGAAATAGAGCTAACCAGTCAAGAGAGCAACAAAGAAGACAACCGAGGCCAGAGCGGAGTATTATGGTTCTTTGCTTGTGCAACGATATTTGCTGCGTTTGTCATCGTTCTTCTAGCGTTCACATGGACAAGTGATGGATAAATTTACTCGTAGTGATGACACGTTCCACGGTTTCACGAACACGAACACTGGTTATCCAATGCGAGTTTTGTATTGGTATCGGACTGCTCGGACTGCTCCCTCCGCCAAAGAATGGGGAAAAACTGATAATTCTTGGTTAGTTTATTGTAGAGTGTAATGAATGATGGTATGGTTTTTGATTGTCTTGTTTGATAAGTTAATTAGAAACCATTTATGGGTTTTGTGTTGTTATCCATACGAGATGAAATCTACTTGAGAGACTTAGTTCATGATTGGATACGAATACTTAAGGTATTAGATATAATTATAAGGGTAAAATAGACTTCTGATTAAGCTGTAATTATGAAAATAATCGACTTGCATGTAATCTGTAAGTCCGTACGGTCCCG TCCTCCTCAACTAACCCATTTACTCTCCACAAGCAACTACACTGCGCGTCTTTGTCCGCCACCGCCACCACCAAATGCGGTGGCCGGCCTCGAAGACTGGCGGGCTTGGCCTCATTGCCATATCATACATCTCCATTGACTACCTCAGCCACCTCTCGCCGGCATGGCATGCCCGTCTCCAGCCAGCTCTTTGGTCCCTTCTTGCCCTTGCCGCCGTCGTTCGTGTTCCCTTCTACAAGCACTGGTCCTCCGAGTTCCGTTCCGCCATTCCATTTCTCTCCTCCATGCTCTTCATGCTCGCCACTCTGCTCTTTGAAGCTCTTTCCGTTCGTTTCGTCACCGCCGTCCTCGGTCTTGATTGGCACAGTGACACATCTCCTCTTCCTGATACGGGCCAATGGCTTCTCCTGGCGTTGAACGAGAAACTTCCTCATACTGTTGTGGAGATATTGAGAGCTCGGATTATTGGATTGCATCACTTCCTGATGTTGTTCATTATGCTTGCATTCTCTGTGCTGTTTGGCTCAGTAAAAGCTCCTGGACTCGGATTAGGTGCGAGGTATATGTTCACCATGGCAATTGGCCGACTTCTTAGAGCCATAACTTTTGTATCTACAATTCTGCCATCTGCAAGGCCATGGTGTGCCTATACTCGATTCCGAGTCCCAGCATATCCTCATCGTTGGGCACAGAAGTACTATGTTCCTTATGCTGAAGATGCTGATACAATTCGCCAGTTAATAAATCAGGACACAGCTTTTGCTGATCCGGGACAGATTCTTGGTGACTTCAGACCTGATTGGGGTAAAATGAGCTTCTTAATAGATTTCCTACGACCAACACCCTCTGAAGGATCTTCTTGGTACAATGTACTTAAGAAGGCCGGGGGTGGCTGCAACGACCTTGTATACAGCGGCCACATGCTCGTTGCCGTGCTCACGGCCATGGCCTGGACGGAGGCTTATGGAGGTCTTAGCTCAGCAGTTGTATGGTTTTTTGTAATACACAGCGCTCAACGTGAAATACGAGAACGCCACCATTACTCTGTCGATTGTGTTGTTGCAATATACGTTGGCATCCTCTTATGGAAAATGACTGGTTTCATTTGGTCAGCGAAAGACGTCGTGAAACGAAAGAGGCTAGCAAAGTTGGAGAAAATTCAAAGTAAACTGGTACAAGCTGCAAAAGATGCAGACATTGATGAAGTTAGAGAACTTCTAAAAGAAATAGAGCTAACCAGTCAAGAGAGCAACAAAGAAGACAACCGAGGCCAGAGCGGAGTATTATGGTTCTTTGCTTGTGCAACGATATTTGCTGCGTTTGTCATCGTTCTTCTAGCGTTCACATGGACAAGTGATGGATAAATTTACTCGTAGTGATGACACGTTCCACGGTTTCACGAACACGAACACTGGTTATCCAATGCGAGTTTTGTATTGGTATCGGACTGCTCGGACTGCTCCCTCCGCCAAAGAATGGGGAAAAACTGATAATTCTTGGTTAGTTTATTGTAGAGTGTAATGAATGATGGTATGGTTTTTGATTGTCTTGTTTGATAAGTTAATTAGAAACCATTTATGGGTTTTGTGTTGTTATCCATACGAGATGAAATCTACTTGAGAGACTTAGTTCATGATTGGATACGAATACTTAAGGTATTAGATATAATTATAAGGGTAAAATAGACTTCTGATTAAGCTGTAATTATGAAAATAATCGACTTGCATGTAATCTGTAAGTCCGTACGGTCCCG ATGCGGTGGCCGGCCTCGAAGACTGGCGGGCTTGGCCTCATTGCCATATCATACATCTCCATTGACTACCTCAGCCACCTCTCGCCGGCATGGCATGCCCGTCTCCAGCCAGCTCTTTGGTCCCTTCTTGCCCTTGCCGCCGTCGTTCGTGTTCCCTTCTACAAGCACTGGTCCTCCGAGTTCCGTTCCGCCATTCCATTTCTCTCCTCCATGCTCTTCATGCTCGCCACTCTGCTCTTTGAAGCTCTTTCCGTTCGTTTCGTCACCGCCGTCCTCGGTCTTGATTGGCACAGTGACACATCTCCTCTTCCTGATACGGGCCAATGGCTTCTCCTGGCGTTGAACGAGAAACTTCCTCATACTGTTGTGGAGATATTGAGAGCTCGGATTATTGGATTGCATCACTTCCTGATGTTGTTCATTATGCTTGCATTCTCTGTGCTGTTTGGCTCAGTAAAAGCTCCTGGACTCGGATTAGGTGCGAGGTATATGTTCACCATGGCAATTGGCCGACTTCTTAGAGCCATAACTTTTGTATCTACAATTCTGCCATCTGCAAGGCCATGGTGTGCCTATACTCGATTCCGAGTCCCAGCATATCCTCATCGTTGGGCACAGAAGTACTATGTTCCTTATGCTGAAGATGCTGATACAATTCGCCAGTTAATAAATCAGGACACAGCTTTTGCTGATCCGGGACAGATTCTTGGTGACTTCAGACCTGATTGGGGTAAAATGAGCTTCTTAATAGATTTCCTACGACCAACACCCTCTGAAGGATCTTCTTGGTACAATGTACTTAAGAAGGCCGGGGGTGGCTGCAACGACCTTGTATACAGCGGCCACATGCTCGTTGCCGTGCTCACGGCCATGGCCTGGACGGAGGCTTATGGAGGTCTTAGCTCAGCAGTTGTATGGTTTTTTGTAATACACAGCGCTCAACGTGAAATACGAGAACGCCACCATTACTCTGTCGATTGTGTTGTTGCAATATACGTTGGCATCCTCTTATGGAAAATGACTGGTTTCATTTGGTCAGCGAAAGACGTCGTGAAACGAAAGAGGCTAGCAAAGTTGGAGAAAATTCAAAGTAAACTGGTACAAGCTGCAAAAGATGCAGACATTGATGAAGTTAGAGAACTTCTAAAAGAAATAGAGCTAACCAGTCAAGAGAGCAACAAAGAAGACAACCGAGGCCAGAGCGGAGTATTATGGTTCTTTGCTTGTGCAACGATATTTGCTGCGTTTGTCATCGTTCTTCTAGCGTTCACATGGACAAGTGATGGATAA MRWPASKTGGLGLIAISYISIDYLSHLSPAWHARLQPALWSLLALAAVVRVPFYKHWSSEFRSAIPFLSSMLFMLATLLFEALSVRFVTAVLGLDWHSDTSPLPDTGQWLLLALNEKLPHTVVEILRARIIGLHHFLMLFIMLAFSVLFGSVKAPGLGLGARYMFTMAIGRLLRAITFVSTILPSARPWCAYTRFRVPAYPHRWAQKYYVPYAEDADTIRQLINQDTAFADPGQILGDFRPDWGKMSFLIDFLRPTPSEGSSWYNVLKKAGGGCNDLVYSGHMLVAVLTAMAWTEAYGGLSSAVVWFFVIHSAQREIRERHHYSVDCVVAIYVGILLWKMTGFIWSAKDVVKRKRLAKLEKIQSKLVQAAKDADIDEVRELLKEIELTSQESNKEDNRGQSGVLWFFACATIFAAFVIVLLAFTWTSDG
BLAST of CmaCh09G012780 vs. TrEMBL
Match: A0A0A0K7Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016930 PE=4 SV=1) HSP 1 Score: 804.3 bits (2076), Expect = 7.3e-230 Identity = 395/429 (92.07%), Postives = 412/429 (96.04%), Query Frame = 1
BLAST of CmaCh09G012780 vs. TrEMBL
Match: B9H7T1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s21540g PE=4 SV=2) HSP 1 Score: 706.8 bits (1823), Expect = 1.6e-200 Identity = 345/430 (80.23%), Postives = 384/430 (89.30%), Query Frame = 1
BLAST of CmaCh09G012780 vs. TrEMBL
Match: W9SAN4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017853 PE=4 SV=1) HSP 1 Score: 691.8 bits (1784), Expect = 5.2e-196 Identity = 337/433 (77.83%), Postives = 376/433 (86.84%), Query Frame = 1
BLAST of CmaCh09G012780 vs. TrEMBL
Match: A0A059BYV2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F04230 PE=4 SV=1) HSP 1 Score: 690.6 bits (1781), Expect = 1.2e-195 Identity = 337/430 (78.37%), Postives = 379/430 (88.14%), Query Frame = 1
BLAST of CmaCh09G012780 vs. TrEMBL
Match: A0A061FIN1_THECC (Sphingomyelin synthetase family protein isoform 1 OS=Theobroma cacao GN=TCM_035631 PE=4 SV=1) HSP 1 Score: 688.7 bits (1776), Expect = 4.4e-195 Identity = 332/429 (77.39%), Postives = 376/429 (87.65%), Query Frame = 1
BLAST of CmaCh09G012780 vs. TAIR10
Match: AT1G43580.1 (AT1G43580.1 Sphingomyelin synthetase family protein) HSP 1 Score: 598.2 bits (1541), Expect = 4.0e-171 Identity = 295/422 (69.91%), Postives = 346/422 (81.99%), Query Frame = 1
BLAST of CmaCh09G012780 vs. NCBI nr
Match: gi|449441209|ref|XP_004138375.1| (PREDICTED: uncharacterized protein LOC101212215 isoform X1 [Cucumis sativus]) HSP 1 Score: 804.3 bits (2076), Expect = 1.0e-229 Identity = 395/429 (92.07%), Postives = 412/429 (96.04%), Query Frame = 1
BLAST of CmaCh09G012780 vs. NCBI nr
Match: gi|659126226|ref|XP_008463076.1| (PREDICTED: uncharacterized protein LOC103501312 [Cucumis melo]) HSP 1 Score: 795.4 bits (2053), Expect = 4.8e-227 Identity = 392/429 (91.38%), Postives = 410/429 (95.57%), Query Frame = 1
BLAST of CmaCh09G012780 vs. NCBI nr
Match: gi|566172539|ref|XP_002306701.2| (hypothetical protein POPTR_0005s21540g [Populus trichocarpa]) HSP 1 Score: 706.8 bits (1823), Expect = 2.3e-200 Identity = 345/430 (80.23%), Postives = 384/430 (89.30%), Query Frame = 1
BLAST of CmaCh09G012780 vs. NCBI nr
Match: gi|703145767|ref|XP_010108620.1| (hypothetical protein L484_017853 [Morus notabilis]) HSP 1 Score: 691.8 bits (1784), Expect = 7.5e-196 Identity = 337/433 (77.83%), Postives = 376/433 (86.84%), Query Frame = 1
BLAST of CmaCh09G012780 vs. NCBI nr
Match: gi|702382414|ref|XP_010063857.1| (PREDICTED: uncharacterized protein LOC104450853 [Eucalyptus grandis]) HSP 1 Score: 690.6 bits (1781), Expect = 1.7e-195 Identity = 337/430 (78.37%), Postives = 379/430 (88.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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