CmaCh09G012700 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G012700
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr09 : 8704406 .. 8704694 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCATGGGATGGATCGAAGAAAGCTCACTCATATGTCTCCATTTTTTAACTTTTTTAAATCGAGGAGAGGTAAAAAGGAAAATCATTGCAACCACAGTGGCTTTTGCGGCGAGATGTCAAGATCGAGCAAGGTGTGACCGAGCGATGAAGACAAAACACATCGTTAGGTTGCTGAACCTGGTTTTGATAGAAAAGCTAAAGATTACATTGACAGGATCTACCGAAACCGTATTTTTGAATTTGAGCGACAAACTGTTACTTTAGCTGTCAATAGAACAAAACTCGATCCG

mRNA sequence

CCATGGGATGGATCGAAGAAAGCTCACTCATATGTCTCCATTTTTTAACTTTTTTAAATCGAGGAGAGGTAAAAAGGAAAATCATTGCAACCACAGTGGCTTTTGCGGCGAGATGTCAAGATCGAGCAAGGTTGCTGAACCTGGTTTTGATAGAAAAGCTAAAGATTACATTGACAGGATCTACCGAAACCGTATTTTTGAATTTGAGCGACAAACTGTTACTTTAGCTGTCAATAGAACAAAACTCGATCCG

Coding sequence (CDS)

ATGGATCGAAGAAAGCTCACTCATATGTCTCCATTTTTTAACTTTTTTAAATCGAGGAGAGGTAAAAAGGAAAATCATTGCAACCACAGTGGCTTTTGCGGCGAGATGTCAAGATCGAGCAAGGTTGCTGAACCTGGTTTTGATAGAAAAGCTAAAGATTACATTGACAGGATCTACCGAAACCGTATTTTTGAATTTGAGCGACAAACTGTTACTTTAGCTGTCAATAGAACAAAACTCGATCCG

Protein sequence

MDRRKLTHMSPFFNFFKSRRGKKENHCNHSGFCGEMSRSSKVAEPGFDRKAKDYIDRIYRNRIFEFERQTVTLAVNRTKLDP
Homology
[Close]
BLAST of CmaCh09G012700 vs. TrEMBL
Match: A0A0A0KAK6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014890 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.4e-18
Identity = 55/92 (59.78%), Postives = 63/92 (68.48%), Query Frame = 1 

Query: 2  DRRKLTHMS-PFFNFFKSRRGKKENHCNHSGFC-GEMSRSSKV------------AEPGF 61
          +R+K  H S   F+FFKSRRG+K +HCNHSG C  EM RS KV            AEPG 
Sbjct: 5  NRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEPGI 64

Query: 62 DRKAKDYIDRIYRNRIFEFERQTVTLAVNRTK 80
          DRKAKDYIDRIYRNR+FE ERQTVT++ N  K
Sbjct: 65 DRKAKDYIDRIYRNRVFESERQTVTISPNGIK 96

[Close]
BLAST of CmaCh09G012700 vs. TrEMBL
Match: A0A0A0KBW1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014870 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-15
Identity = 52/92 (56.52%), Postives = 64/92 (69.57%), Query Frame = 1 

Query: 2  DRRKLTHMS-PFFNFFKSRRGKKENHCNHSG-FCGEMSRSSKV------------AEPGF 61
          +R+K +H S   F+FFKSRRG+K +H +H G +  EM RS+KV            AEPG 
Sbjct: 4  NRQKKSHSSFSIFSFFKSRRGRKGDHYDHGGAWLDEMPRSNKVWPSDEDKAHHWVAEPGI 63

Query: 62 DRKAKDYIDRIYRNRIFEFERQTVTLAVNRTK 80
          DRKAKDYIDRIYRNR+FE ERQTVT++ N TK
Sbjct: 64 DRKAKDYIDRIYRNRVFESERQTVTISPNGTK 95

[Close]
BLAST of CmaCh09G012700 vs. TrEMBL
Match: A0A0A0K7Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014900 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.9e-15
Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 1 

Query: 2  DRRKLTHMS-PFFNFFKSRRGKKENHCNHSG-FCGEMSRSSKV------------AEPGF 61
          +R+K +H S   F+FFKS+RG+K +H +H G +  EM RS+KV            AEPG 
Sbjct: 4  NRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAEPGI 63

Query: 62 DRKAKDYIDRIYRNRIFEFERQTVTLAVNRTK 80
          DRKAKDYIDRIYRNR+FE ERQTVT++ N TK
Sbjct: 64 DRKAKDYIDRIYRNRVFESERQTVTISPNGTK 95

[Close]
BLAST of CmaCh09G012700 vs. TrEMBL
Match: A0A0A0K8V3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014880 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.3e-12
Identity = 46/88 (52.27%), Postives = 56/88 (63.64%), Query Frame = 1 

Query: 3  RRKLTHMS-PFFNFFKSRRGKKENHCNHSG-FCGEMSRSSKV------------AEPGFD 62
          + K +H S  FF+F KS+  +K +H +H G +  E SRS KV            AEPG D
Sbjct: 5  KHKKSHSSFSFFSFLKSKWSRKGDHYDHGGSWLDEKSRSGKVWPSDEDKAHHWVAEPGID 64

Query: 63 RKAKDYIDRIYRNRIFEFERQTVTLAVN 77
          RKAKDYIDRIYRNR+FE ERQTVT+  N
Sbjct: 65 RKAKDYIDRIYRNRVFESERQTVTIPTN 92

[Close]
BLAST of CmaCh09G012700 vs. TrEMBL
Match: A0A0A0K8W0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016905 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 2.6e-11
Identity = 45/87 (51.72%), Postives = 55/87 (63.22%), Query Frame = 1 

Query: 3  RRKLTHMS-PFFNFFKSRRGKKENHCNHSGFCGEMSRSSKV------------AEPGFDR 62
          R+K TH S   F+FFKS+RG+K +   H     ++  SSKV            AEPG DR
Sbjct: 6  RQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDR 65

Query: 63 KAKDYIDRIYRNRIFEFERQTVTLAVN 77
          KAKDYIDRIY+NR+FE ERQTVT+  N
Sbjct: 66 KAKDYIDRIYKNRVFETERQTVTIHPN 92

[Close]
BLAST of CmaCh09G012700 vs. NCBI nr
Match: gi|700190665|gb|KGN45869.1| (hypothetical protein Csa_6G014890 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 9.2e-18
Identity = 55/92 (59.78%), Postives = 63/92 (68.48%), Query Frame = 1 

Query: 2  DRRKLTHMS-PFFNFFKSRRGKKENHCNHSGFC-GEMSRSSKV------------AEPGF 61
          +R+K  H S   F+FFKSRRG+K +HCNHSG C  EM RS KV            AEPG 
Sbjct: 5  NRQKKAHASFSIFSFFKSRRGRKGDHCNHSGSCLDEMPRSGKVWPSDEDKAHHWVAEPGI 64

Query: 62 DRKAKDYIDRIYRNRIFEFERQTVTLAVNRTK 80
          DRKAKDYIDRIYRNR+FE ERQTVT++ N  K
Sbjct: 65 DRKAKDYIDRIYRNRVFESERQTVTISPNGIK 96

[Close]
BLAST of CmaCh09G012700 vs. NCBI nr
Match: gi|700190663|gb|KGN45867.1| (hypothetical protein Csa_6G014870 [Cucumis sativus])

HSP 1 Score: 90.5 bits (223), Expect = 1.5e-15
Identity = 52/92 (56.52%), Postives = 64/92 (69.57%), Query Frame = 1 

Query: 2  DRRKLTHMS-PFFNFFKSRRGKKENHCNHSG-FCGEMSRSSKV------------AEPGF 61
          +R+K +H S   F+FFKSRRG+K +H +H G +  EM RS+KV            AEPG 
Sbjct: 4  NRQKKSHSSFSIFSFFKSRRGRKGDHYDHGGAWLDEMPRSNKVWPSDEDKAHHWVAEPGI 63

Query: 62 DRKAKDYIDRIYRNRIFEFERQTVTLAVNRTK 80
          DRKAKDYIDRIYRNR+FE ERQTVT++ N TK
Sbjct: 64 DRKAKDYIDRIYRNRVFESERQTVTISPNGTK 95

[Close]
BLAST of CmaCh09G012700 vs. NCBI nr
Match: gi|700190666|gb|KGN45870.1| (hypothetical protein Csa_6G014900 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 5.6e-15
Identity = 51/92 (55.43%), Postives = 64/92 (69.57%), Query Frame = 1 

Query: 2  DRRKLTHMS-PFFNFFKSRRGKKENHCNHSG-FCGEMSRSSKV------------AEPGF 61
          +R+K +H S   F+FFKS+RG+K +H +H G +  EM RS+KV            AEPG 
Sbjct: 4  NRQKKSHSSFSIFSFFKSKRGRKGDHYDHGGAWPDEMPRSNKVWPSDEDKAHHWIAEPGI 63

Query: 62 DRKAKDYIDRIYRNRIFEFERQTVTLAVNRTK 80
          DRKAKDYIDRIYRNR+FE ERQTVT++ N TK
Sbjct: 64 DRKAKDYIDRIYRNRVFESERQTVTISPNGTK 95

[Close]
BLAST of CmaCh09G012700 vs. NCBI nr
Match: gi|700190664|gb|KGN45868.1| (hypothetical protein Csa_6G014880 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 7.5e-12
Identity = 46/88 (52.27%), Postives = 56/88 (63.64%), Query Frame = 1 

Query: 3  RRKLTHMS-PFFNFFKSRRGKKENHCNHSG-FCGEMSRSSKV------------AEPGFD 62
          + K +H S  FF+F KS+  +K +H +H G +  E SRS KV            AEPG D
Sbjct: 5  KHKKSHSSFSFFSFLKSKWSRKGDHYDHGGSWLDEKSRSGKVWPSDEDKAHHWVAEPGID 64

Query: 63 RKAKDYIDRIYRNRIFEFERQTVTLAVN 77
          RKAKDYIDRIYRNR+FE ERQTVT+  N
Sbjct: 65 RKAKDYIDRIYRNRVFESERQTVTIPTN 92

[Close]
BLAST of CmaCh09G012700 vs. NCBI nr
Match: gi|700190669|gb|KGN45873.1| (hypothetical protein Csa_6G016905 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 3.7e-11
Identity = 45/87 (51.72%), Postives = 55/87 (63.22%), Query Frame = 1 

Query: 3  RRKLTHMS-PFFNFFKSRRGKKENHCNHSGFCGEMSRSSKV------------AEPGFDR 62
          R+K TH S   F+FFKS+RG+K +   H     ++  SSKV            AEPG DR
Sbjct: 6  RQKKTHSSFSIFSFFKSKRGRKGDVYEHGTNWEDVPSSSKVWPSDEDKGYRWVAEPGIDR 65

Query: 63 KAKDYIDRIYRNRIFEFERQTVTLAVN 77
          KAKDYIDRIY+NR+FE ERQTVT+  N
Sbjct: 66 KAKDYIDRIYKNRVFETERQTVTIHPN 92

The following BLAST results are available for this feature:
BLAST of CmaCh09G012700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh09G012700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAK6_CUCSA6.4e-1859.78Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014890 PE=4 SV=1[more]
A0A0A0KBW1_CUCSA1.0e-1556.52Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014870 PE=4 SV=1[more]
A0A0A0K7Y2_CUCSA3.9e-1555.43Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014900 PE=4 SV=1[more]
A0A0A0K8V3_CUCSA5.3e-1252.27Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014880 PE=4 SV=1[more]
A0A0A0K8W0_CUCSA2.6e-1151.72Uncharacterized protein OS=Cucumis sativus GN=Csa_6G016905 PE=4 SV=1[more]
BLAST of CmaCh09G012700 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh09G012700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700190665|gb|KGN45869.1|9.2e-1859.78hypothetical protein Csa_6G014890 [Cucumis sativus][more]
gi|700190663|gb|KGN45867.1|1.5e-1556.52hypothetical protein Csa_6G014870 [Cucumis sativus][more]
gi|700190666|gb|KGN45870.1|5.6e-1555.43hypothetical protein Csa_6G014900 [Cucumis sativus][more]
gi|700190664|gb|KGN45868.1|7.5e-1252.27hypothetical protein Csa_6G014880 [Cucumis sativus][more]
gi|700190669|gb|KGN45873.1|3.7e-1151.72hypothetical protein Csa_6G016905 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G012700.1CmaCh09G012700.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh09G012700CmoCh09G012260Cucurbita moschata (Rifu)cmacmoB028
CmaCh09G012700Lsi08G002140Bottle gourd (USVL1VR-Ls)cmalsiB034
CmaCh09G012700MELO3C025017.2Melon (DHL92) v3.6.1cmamedB029
CmaCh09G012700CsaV3_6G002620Cucumber (Chinese Long) v3cmacucB0040
CmaCh09G012700Cla97C08G146310Watermelon (97103) v2cmawmbB037
CmaCh09G012700Bhi04G001775Wax gourdcmawgoB0016
CmaCh09G012700CsGy6G002500Cucumber (Gy14) v2cgybcmaB700
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G012700Cucurbita pepo (Zucchini)cmacpeB062
CmaCh09G012700Melon (DHL92) v3.5.1cmameB010