CmaCh09G012220 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G012220
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr09 : 8140782 .. 8142630 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGGGCGGTGGAGATTGTACCAGCGGGCGTCAGGGAGTTTCGTGGACTCGATTCTCTGTGGAACTTCTCTTGATGGGAGGATCACTCTCCCAAGAATCTCCGCTGTTCCTCTGTCTTCAACAGTGATGATGATGAAATCTTCAAATGGCTCGGGCGCTACAAACATCAGCTCCTCGTTCCAAACTGGGTTGATCACTCGCATCTGTGAAGGTTTGGTTACTTTCCCCTGATTGCAAAATTGTATTCTTACGAATGTATCTGGTGGTTTTGATTTGTCTGATGGGATGAGATCTTGAGCTTCGATCACTTGGGCTCTTAGATAGTATAGTTTAGGAGAGAAATAGACCTTTGATCTTGTGTTAGCAAGATTGCCATGGCTGACCCTATGAGCATCAGAATGCCAAGCATCAGAGAAAAACTCATCCGCCTGAGTACCCATCCAAACCGCAAGCATCACTTCCCCCTTTGCTTTGATGCCTTTTTTGTCCACTAATTTGTACCATTGAGGAGCCAATGGACTATCTGGAGGTACTCTCAATGGAGCCTCGGGGATATCAAACAAAACCCTTCCCACAAAATCATCCTTCCCCAAATCCTTGTCTTTCACCGTCACTTCCAGTAAGCTTGCTTGCAATGTCTCTTTTGCAAATGCAAAAATCTGCTTCCAAACTGGGTTTTGATTCTTCTCCAAGTGCTTTGTGACTCCTTTGTAGTTCCCTACTTTCACTTCCACATATGGGTCTAAACTCCCGGAAACATCCATGACAGGGAGATCTTTAGCTTTAACCACGTTTACATACAGAAAATGCATCTGCTCCACCATGTCGTAGGTGCTGATGATCTTGTCTTTTCCTCTGTAGCCGTACCGCAATCTTGCTGCTAATGGCGGGCTGGTCTCCACCAATGCGTACTCTGGATTTTGCTTTGGAGCTGGTAAATGCATTACTGTCGCTGGAGATGGGCCTGCTTGAGAGAAGTCCATCCGCGTCGCCATTGGCGGTGGCCACTTGAATTCCATCGGTGGAGGAGCCACCGACGCCGCAGTCGCAGCCGGAGCTGCTCCTATGGAGTGGAAGGTCTTGACGTCCTTTTCCTTCTTCTTGGGCACTTGTAATTCCTCCTGATCGAATATGTTGGGGTTGATTTCTTGCAGGGGAGTTTCAAAATCGGCAGTTTGTGGCGGCGGCGTCGAATCATCATCGTGAGTCAGATACATTCGGAACCCAATATCGCCTTTGATATGAGAGAAAAGGCCACGTTTGTCAAGTGGGTATCTCTGGATGTTAGCTTCGTGTTCAGAACGGGGCACCGACATGCCGGAGATTCTGACACGGCCGAGAAAATCCCGGCGGTGGCCGGATTTCCTGTCGTTATAAACCACGACATCGATGGTGGTGTTGGGGAATTGTCGAGGGTCGGTGATGTTGAAAACGAGATTCTCATTCCAGGAAGGATTGAGATCGGTGTGTATGGTACGAGTCCTCTGTTTCTGGTTGCCAAAGTCGACCTCGACAAAGGGGTTGGCAGAGTCGCCGTCCTTGGGCATAAGGTCGCCAGCGTCGAGGATTTGGACAACGAGCTTGGTCATCGGAATCTGAAACAGAGTATGAAGAAGGAAGAGTGAGAGTAGTAAGGAGGAGGAGAGAAACGACGGCGGCGGAGGCGGCAATGGGGAAAGGAATCGGCGACGATGAGAATGAGAAGCTCATCTGGGGGAGTGGGAGTATGAAGAGAGATACCCAGATGGTTTTAGAGAGGGAGAGGGAGAGGGGAGGAGAGAATTTGTTCGTTTGTGTGTCTGGTTGCGGTAAAGTGGAGTGCGATGGAGACAGATTCTTGCGTTGA

mRNA sequence

ATGAATGGGCGGTGGAGATTGTACCAGCGGGCGTCAGGGAGTTTCGTGGACTCGATTCTCTGTGGAACTTCTCTTGATGGGAGGATCACTCTCCCAAGAATCTCCGCTGTTCCTCTGTCTTCAACAGTGATGATGATGAAATCTTCAAATGGCTCGGGCGCTACAAACATCAGCTCCTCGTTCCAAACTGGGTTGATCACTCGCATCTGTGAAGGTTTGCCGTACCGCAATCTTGCTGCTAATGGCGGGCTGGTCTCCACCAATGCGTACTCTGGATTTTGCTTTGGAGCTGAGAAGTCCATCCGCGTCGCCATTGGCGGTGGCCACTTGAATTCCATCGGTGGAGGAGCCACCGACGCCGCAGTCGCAGCCGGAGCTGCTCCTATGGAGTGGAAGGGGAGTTTCAAAATCGGCAGTTTGTGGCGGCGGCGTCGAATCATCATCGTGAGTCAGATACATTCGGAACCCAATATCGCCTTTGATATGAGAGAAAAGGCCACGTTTGTCAAGTGGGTATCTCTGGATGTTAGCTTCGTGTTCAGAACGGGGCACCGACATGCCGGAGATTCTGACACGGCCGAGAAAATCCCGGCGGTGGCCGGATTTCCTGTCGTTATAAACCACGACATCGATGGTGGTGTTGGGGAATTGTCGAGGGTCGGTGATGTTGAAAACGAGATTCTCATTCCAGGAAGGATTGAGATCGGTGTGTATGGTACGAGTCCTCTGTTTCTGGTTGCCAAAGTCGACCTCGACAAAGGGGTTGGCAGAGTCGCCGTCCTTGGGCATAAGGTCGCCAGCGTCGAGGATTTGGACAACGAGCTTGAGTATGAAGAAGGAAGAGTGAGAGTAGTAAGGAGGAGGAGAGAAACGACGGCGGCGGAGGCGGCAATGGGGAAAGGAATCGGCGACGATGAGAATGAGAAGCTCATCTGGGGGAGTGGGAGTATGAAGAGAGATACCCAGATGGTTTTAGAGAGGGAGAGGGAGAGGGGAGGAGAGAATTTGTTCGTTTGTGTGTCTGGTTGCGGTAAAGTGGAGTGCGATGGAGACAGATTCTTGCGTTGA

Coding sequence (CDS)

ATGAATGGGCGGTGGAGATTGTACCAGCGGGCGTCAGGGAGTTTCGTGGACTCGATTCTCTGTGGAACTTCTCTTGATGGGAGGATCACTCTCCCAAGAATCTCCGCTGTTCCTCTGTCTTCAACAGTGATGATGATGAAATCTTCAAATGGCTCGGGCGCTACAAACATCAGCTCCTCGTTCCAAACTGGGTTGATCACTCGCATCTGTGAAGGTTTGCCGTACCGCAATCTTGCTGCTAATGGCGGGCTGGTCTCCACCAATGCGTACTCTGGATTTTGCTTTGGAGCTGAGAAGTCCATCCGCGTCGCCATTGGCGGTGGCCACTTGAATTCCATCGGTGGAGGAGCCACCGACGCCGCAGTCGCAGCCGGAGCTGCTCCTATGGAGTGGAAGGGGAGTTTCAAAATCGGCAGTTTGTGGCGGCGGCGTCGAATCATCATCGTGAGTCAGATACATTCGGAACCCAATATCGCCTTTGATATGAGAGAAAAGGCCACGTTTGTCAAGTGGGTATCTCTGGATGTTAGCTTCGTGTTCAGAACGGGGCACCGACATGCCGGAGATTCTGACACGGCCGAGAAAATCCCGGCGGTGGCCGGATTTCCTGTCGTTATAAACCACGACATCGATGGTGGTGTTGGGGAATTGTCGAGGGTCGGTGATGTTGAAAACGAGATTCTCATTCCAGGAAGGATTGAGATCGGTGTGTATGGTACGAGTCCTCTGTTTCTGGTTGCCAAAGTCGACCTCGACAAAGGGGTTGGCAGAGTCGCCGTCCTTGGGCATAAGGTCGCCAGCGTCGAGGATTTGGACAACGAGCTTGAGTATGAAGAAGGAAGAGTGAGAGTAGTAAGGAGGAGGAGAGAAACGACGGCGGCGGAGGCGGCAATGGGGAAAGGAATCGGCGACGATGAGAATGAGAAGCTCATCTGGGGGAGTGGGAGTATGAAGAGAGATACCCAGATGGTTTTAGAGAGGGAGAGGGAGAGGGGAGGAGAGAATTTGTTCGTTTGTGTGTCTGGTTGCGGTAAAGTGGAGTGCGATGGAGACAGATTCTTGCGTTGA

Protein sequence

MNGRWRLYQRASGSFVDSILCGTSLDGRITLPRISAVPLSSTVMMMKSSNGSGATNISSSFQTGLITRICEGLPYRNLAANGGLVSTNAYSGFCFGAEKSIRVAIGGGHLNSIGGGATDAAVAAGAAPMEWKGSFKIGSLWRRRRIIIVSQIHSEPNIAFDMREKATFVKWVSLDVSFVFRTGHRHAGDSDTAEKIPAVAGFPVVINHDIDGGVGELSRVGDVENEILIPGRIEIGVYGTSPLFLVAKVDLDKGVGRVAVLGHKVASVEDLDNELEYEEGRVRVVRRRRETTAAEAAMGKGIGDDENEKLIWGSGSMKRDTQMVLERERERGGENLFVCVSGCGKVECDGDRFLR
Homology
[Close]
BLAST of CmaCh09G012220 vs. TrEMBL
Match: A0A0A0KSX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652215 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.9e-50
Identity = 106/162 (65.43%), Postives = 127/162 (78.40%), Query Frame = 1 

Query: 132 KGSFKIGSLWRR----------RRIIIVSQIHSEPNIAFDMREKATFVKWVSLDVSFVFR 191
           +G F++G LW R          RRIIIV+ IHS+ NIAFDMREKATFVKWVSL++SF+FR
Sbjct: 82  QGRFEMGRLWWRWMGRRRRRKGRRIIIVNHIHSKSNIAFDMREKATFVKWVSLNISFLFR 141

Query: 192 TGHRHAGDSDTAEKIPAVAGFPVVINHDIDGGVGELSRVGDVENEILIPGRIEIGVYGTS 251
             HRHAGDS+TAEKIPAVAGFP+VINH+IDG VG++ RVGDVE E+LIP RIEI ++G S
Sbjct: 142 KRHRHAGDSNTAEKIPAVAGFPLVINHNIDGLVGKIFRVGDVEEELLIPVRIEISMFGMS 201

Query: 252 PLFLVAKVDLDKGVGRVAVLGHKVASVEDLDNELEYEEGRVR 284
            LFLV K++LDKG GRVAV GH+VA VED   EL +  G+ R
Sbjct: 202 SLFLVVKINLDKGAGRVAVFGHEVAGVEDFYYELGHGGGKDR 243

[Close]
BLAST of CmaCh09G012220 vs. TrEMBL
Match: A0A0P0WH06_ORYSJ (Os04g0691750 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0691750 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-08
Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 1 

Query: 142  RRRRIIIVSQIHSEPNIAFDMREKATFVKWVSLDVSFVFRTGHRHAGDSDTAEKIPAVAG 201
            RR R ++  ++ SE ++A D  E+A  ++ V+L+   +   G   +GD+D AE+     G
Sbjct: 865  RRIRGVVGDEVESEGDVAGDAGEEAALLERVALEEGVLRGGGEGGSGDADAAEEGVEAGG 924

Query: 202  F-----PVVINHDIDGGVGELSRVGDVENEILIPGRIEIGVYGTSPLFLVAKVDL-DKGV 261
                   +V++ D+DG  GE   V DVE+E ++P R  IG  G   L L  ++ L ++  
Sbjct: 925  VVVGEAAIVVDGDVDGEGGEAGGVADVEHEGVVPLRGTIGGLGRGALLLPVELHLYERVA 984

Query: 262  GRVAVLGHKVASVEDLDNEL 276
            G  AVLG K+  V+ L   L
Sbjct: 985  GAGAVLGRKLRRVQYLHAHL 1004

[Close]
BLAST of CmaCh09G012220 vs. NCBI nr
Match: gi|700197538|gb|KGN52715.1| (hypothetical protein Csa_5G652215 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 2.7e-50
Identity = 106/162 (65.43%), Postives = 127/162 (78.40%), Query Frame = 1 

Query: 132 KGSFKIGSLWRR----------RRIIIVSQIHSEPNIAFDMREKATFVKWVSLDVSFVFR 191
           +G F++G LW R          RRIIIV+ IHS+ NIAFDMREKATFVKWVSL++SF+FR
Sbjct: 82  QGRFEMGRLWWRWMGRRRRRKGRRIIIVNHIHSKSNIAFDMREKATFVKWVSLNISFLFR 141

Query: 192 TGHRHAGDSDTAEKIPAVAGFPVVINHDIDGGVGELSRVGDVENEILIPGRIEIGVYGTS 251
             HRHAGDS+TAEKIPAVAGFP+VINH+IDG VG++ RVGDVE E+LIP RIEI ++G S
Sbjct: 142 KRHRHAGDSNTAEKIPAVAGFPLVINHNIDGLVGKIFRVGDVEEELLIPVRIEISMFGMS 201

Query: 252 PLFLVAKVDLDKGVGRVAVLGHKVASVEDLDNELEYEEGRVR 284
            LFLV K++LDKG GRVAV GH+VA VED   EL +  G+ R
Sbjct: 202 SLFLVVKINLDKGAGRVAVFGHEVAGVEDFYYELGHGGGKDR 243

[Close]
BLAST of CmaCh09G012220 vs. NCBI nr
Match: gi|937916870|dbj|BAS91789.1| (Os04g0691750, partial [Oryza sativa Japonica Group])

HSP 1 Score: 68.6 bits (166), Expect = 2.6e-08
Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 1 

Query: 142  RRRRIIIVSQIHSEPNIAFDMREKATFVKWVSLDVSFVFRTGHRHAGDSDTAEKIPAVAG 201
            RR R ++  ++ SE ++A D  E+A  ++ V+L+   +   G   +GD+D AE+     G
Sbjct: 865  RRIRGVVGDEVESEGDVAGDAGEEAALLERVALEEGVLRGGGEGGSGDADAAEEGVEAGG 924

Query: 202  F-----PVVINHDIDGGVGELSRVGDVENEILIPGRIEIGVYGTSPLFLVAKVDL-DKGV 261
                   +V++ D+DG  GE   V DVE+E ++P R  IG  G   L L  ++ L ++  
Sbjct: 925  VVVGEAAIVVDGDVDGEGGEAGGVADVEHEGVVPLRGTIGGLGRGALLLPVELHLYERVA 984

Query: 262  GRVAVLGHKVASVEDLDNEL 276
            G  AVLG K+  V+ L   L
Sbjct: 985  GAGAVLGRKLRRVQYLHAHL 1004

The following BLAST results are available for this feature:
BLAST of CmaCh09G012220 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh09G012220 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSX0_CUCSA1.9e-5065.43Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652215 PE=4 SV=1[more]
A0A0P0WH06_ORYSJ1.8e-0832.86Os04g0691750 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0691750 ... [more]
BLAST of CmaCh09G012220 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh09G012220 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700197538|gb|KGN52715.1|2.7e-5065.43hypothetical protein Csa_5G652215 [Cucumis sativus][more]
gi|937916870|dbj|BAS91789.1|2.6e-0832.86Os04g0691750, partial [Oryza sativa Japonica Group][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G012220.1CmaCh09G012220.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh09G012220Lsi08G000190Bottle gourd (USVL1VR-Ls)cmalsiB033
CmaCh09G012220CsGy5G030740Cucumber (Gy14) v2cgybcmaB579
CmaCh09G012220Carg27180Silver-seed gourdcarcmaB1193
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G012220Watermelon (97103) v2cmawmbB036
CmaCh09G012220Wax gourdcmawgoB0010
CmaCh09G012220Wax gourdcmawgoB0011
CmaCh09G012220Wax gourdcmawgoB0012
CmaCh09G012220Cucumber (Gy14) v1cgycmaB0087
CmaCh09G012220Cucumber (Gy14) v1cgycmaB0658
CmaCh09G012220Cucurbita moschata (Rifu)cmacmoB029
CmaCh09G012220Wild cucumber (PI 183967)cmacpiB030
CmaCh09G012220Wild cucumber (PI 183967)cmacpiB031
CmaCh09G012220Cucumber (Chinese Long) v2cmacuB030
CmaCh09G012220Melon (DHL92) v3.5.1cmameB010
CmaCh09G012220Melon (DHL92) v3.5.1cmameB011
CmaCh09G012220Watermelon (Charleston Gray)cmawcgB030
CmaCh09G012220Watermelon (97103) v1cmawmB016
CmaCh09G012220Cucurbita pepo (Zucchini)cmacpeB062
CmaCh09G012220Cucumber (Gy14) v2cgybcmaB580
CmaCh09G012220Melon (DHL92) v3.6.1cmamedB011
CmaCh09G012220Melon (DHL92) v3.6.1cmamedB012
CmaCh09G012220Cucumber (Chinese Long) v3cmacucB0037