CmaCh09G012110 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCAAGGAAGCGGGCGGTTGTAGAAGCATGGTGAAGGGTGGTGAGGTCACTAGAATGGGATGGAGAAGAGAGGGGGAAGTAGAGAGAGATGCCCATCTTGGTGTTTTGCATTGTTAGTATTTGAATCATGAGAATGTTAATTAACACTTCAATTGCAGATTAATTCGTCTAGGGGTCTTCGATATAGGTCCTCTCTACATCAACAAGCAAATTTGAGAAATGCTGGTAAGTTATTCCTCGCTAAGAAATCTTTTTCTAGTTAATTTCTTCTGTAAAAGAACTTAACTTTAACATGACACTTTTTTTTGTGCGGCTCAATAGTTTTCGCTACCTTTTTCTACAATGGTATTTTAGCAGCATTTACTGGCCTAGACCAACAGAAATTTATGACCTTTTCAATATTGTAAAATGATTCATGCTTTATCATTTCATCATCAAGTATAGTTGTTTTTCATCCTCGACTAGATACACCAGAAGAGATTATATCACAGAACTTTTGCCTATAGTTTGCTTACATGTGAAGTGAAATGTGTTAGATGCTGTGCAATTGTTCATGGGTAAATTTTTCTTGATCACTTACTAGCGAAATATTAAAATTATCGATCGATTGTTGCTCATTTAATTTTGTTCTATTTGCAATTCTTTTGATCACCTGCTGATTCTACGACCATGCAAGAAATTCTATACATCTTGACTTTGTCATCAGGAAATCAATGGGGTTTTAAAACACTCTGGATATATTTGAATCATGATTCATTGGCATGAATTTTCCTTCAAGGAAAGACCCATTTCATTTGATTCAGTTGCAATAGCATGTTATTTTGACACAAATATTTTCATGAAATGCTACATAAATTTTGTTCTTCGGAGAATGTGTGGAAATTTGATGTATGGGTTCGGTAAACAATATGTTTTCATTATAATTTTCATATAGAAAGTTAATTTTAGCCAAGGCTTTGATGTTTCCCCATGATCTACAGCTCAACGTTATTGCTTCTCATCCATCGTCAGACAATGTGCTGGCGTCTCTTGGTGTTATCTTACTCCGAACAAAAATCTATACAATCCTTGGTACAACAAATTGCTTAGTGGAAAAAGAAACCCCCGGTACGTCCTTGTTAGGTCAGGAGTTGCAAAAATGGGAACTCATGAAGCTGGTTATCCATTATCAGGTCTCTCTTGGATGACTTTTGTTTCCGTTTTGTACCTTTTTCTTTTCTTTTGACCTGCTATCTTATCTGTCTAATTCCAATTTTATTTTGTTTTTAACTACCTAAAGTGCAGAAGTACCATTGAGCTCAAAAGTCAGAGGAGCATGCTTTTATGCTACTACTGCAATTACTGCTATTTTTCTCTTTATGCTTATGCTGGGGGCACATCCAATTGTGTTATTGATGGATAGATACCGCAGAAGAATTCATTACACAATTGCTAAAATGTGGGCAAGTTTGAGCATCGCTCCATTTTTTAGGATCAAATATGAAGGGTTGGAGAATTTGCCCTCTTCAAATTCTCCTGCTGTGTACGTTTCCAACCATCAGAGCTTTCTAGACATATATACACTTCTTACCCTTGGCAGAAGCTTTAAGTTCATTAGCAAGACTGCAATATTTCTCTTTCCAATTATTGGTTGGGCTATGTTTATGATGGGTGTCATTCCTTTGAAGCGCATGGATAGCAGAAGCCAATTGGTACTTTCTTTCATAATCTGTTTGGACTTTGCACAGTTTATTAGTTGGAACCTTTGAAATGTTTTAACTTTTTTTCATGGTTAAGAATGTTCCTGGGTTATTACTTAAAAGTTGGTTAATTTTTTAATGAAGGACTGTCTGAAGCAGTGCATGGAGCTTATAAGGAAGGGTGCATCTGTATTTTTCTTTCCTGAGGGAACGCGTAGTAAGGATGGAAAATTAGGTGCTTTCAAGGTAACTGAACATCATATTTCAAACCATTGTTAGATACAATTGGTTAAAAAGCATAAAAATCTGTTTGTGTCTTTTTGCATGCATAGTTTTCTCTAATTAAATATCTTCTAATTTTCAAAAAATATATGGTTTGTAGAAAGGAGCATTCAGTGTTGCAGCAAAGACCAAAGTGCCCGTTGTACCCATTACACTCATGGGAACTGGTAGCATTATGCCACCGGGATTTGAAGGGATCTTGAATATGGGATCCGTGAAAGTCGTTATCCACAAGCCTGTCGTCGGAATTGATCCAGAAGCATTGTGTAATGAAGCTAGAAATGTAATTGCAGATGCCCTGAGTAAACAATGTTGAGGTCGTCTGTTGAAAGTGATTTTTGATTTCATTACTCAGATTTTAATCACCTGATGTGGAGTATCTATACTTTTTACGAGGTAACAATTTCTCTTCATTTCAGGGTATTATTTCTTTTGCATATCATCTCATACACTTCATTGTTTTGCATATCATCTCGTCCACATATTCTAGTGTTTGATGAACAAGCAAGCAGTAGTGGCTATAGGTGGCTTGATTGATTATTGGGATTTGGGTTCAAGTTTGTAAAACGTTCTGGTGAGAATGTATATCAATGGAGGAAGTGAAGAGATTTAAAGGCCTTATAGGACCTGCACGAGTACTTTTTGGATTGTACAAACGCAAAAGAATTTTGAATTTGGTTCGTAGTTTTGCATCATCAGATGAATGAAAAGAAAAATTGTAAAAGTCTTTCGAATATATATCTTTTGGTCGTCAAGGACCCTGCAGATTTTTTTTGCGGTATGGTAATTGTATATTTTTTTGATGGGGTTTGGGTTGGCTCAGTATTGGCAGTGGCCAAGCAATTTTCTAAATTTTGGTGCCTTTTTTCCTTCTGACTTTACTCGATGCAGCTTTTCATTGTGCATCTTTCGCAGGTTGTTACTCGAGCAATGGATTTTTAATTACTTTTGAACATCTTGAATTAGTGATTGATCATCTTTTATGTGTAAAGGTTGATTGATCTCCTCAGCATACGATGTCGTATCTATGTTCGTTTAGGGTGTTGTTTTTTTTTATGGTCACATGCTCAACATGTCCTCTCTTGTTCTAAGTTCGATTTTATTTATTATATAGAGCTTTAAGGATTAGTGCCTCTCCACC ATGTTCAAGGAAGCGGGCGGTTGTAGAAGCATGGTGAAGGGTGGTGAGATTAATTCGTCTAGGGGTCTTCGATATAGGTCCTCTCTACATCAACAAGCAAATTTGAGAAATGCTGCTCAACGTTATTGCTTCTCATCCATCGTCAGACAATGTGCTGGCGTCTCTTGGTGTTATCTTACTCCGAACAAAAATCTATACAATCCTTGGTACAACAAATTGCTTAGTGGAAAAAGAAACCCCCGGTACGTCCTTGTTAGGTCAGGAGTTGCAAAAATGGGAACTCATGAAGCTGGTTATCCATTATCAGAAGTACCATTGAGCTCAAAAGTCAGAGGAGCATGCTTTTATGCTACTACTGCAATTACTGCTATTTTTCTCTTTATGCTTATGCTGGGGGCACATCCAATTGTGTTATTGATGGATAGATACCGCAGAAGAATTCATTACACAATTGCTAAAATGTGGGCAAGTTTGAGCATCGCTCCATTTTTTAGGATCAAATATGAAGGGTTGGAGAATTTGCCCTCTTCAAATTCTCCTGCTGTGTACGTTTCCAACCATCAGAGCTTTCTAGACATATATACACTTCTTACCCTTGGCAGAAGCTTTAAGTTCATTAGCAAGACTGCAATATTTCTCTTTCCAATTATTGGTTGGGCTATGTTTATGATGGGTGTCATTCCTTTGAAGCGCATGGATAGCAGAAGCCAATTGGACTGTCTGAAGCAGTGCATGGAGCTTATAAGGAAGGGTGCATCTGTATTTTTCTTTCCTGAGGGAACGCGTAGTAAGGATGGAAAATTAGGTGCTTTCAAGAAAGGAGCATTCAGTGTTGCAGCAAAGACCAAAGTGCCCGTTGTACCCATTACACTCATGGGAACTGGTAGCATTATGCCACCGGGATTTGAAGGGATCTTGAATATGGGATCCGTGAAAGTCGTTATCCACAAGCCTGTCGTCGGAATTGATCCAGAAGCATTGTGTAATGAAGCTAGAAATGTAATTGCAGATGCCCTGAGTAAACAATGTTGAGGTCGTCTGTTGAAAGTGATTTTTGATTTCATTACTCAGATTTTAATCACCTGATGTGGAGTATCTATACTTTTTACGAGTGTTTGATGAACAAGCAAGCAGTAGTGGCTATAGGTGGCTTGATTGATTATTGGGATTTGGGTTCAAGTTTGTAAAACGTTCTGGTGAGAATGTATATCAATGGAGGAAGTGAAGAGATTTAAAGGCCTTATAGGACCTGCACGAGTACTTTTTGGATTGTACAAACGCAAAAGAATTTTGAATTTGGTTCGTAGTTTTGCATCATCAGATGAATGAAAAGAAAAATTGTAAAAGTCTTTCGAATATATATCTTTTGGTCGTCAAGGACCCTGCAGATTTTTTTTGCGGTATGGTAATTGTATATTTTTTTGATGGGGTTTGGGTTGGCTCAGTATTGGCAGTGGCCAAGCAATTTTCTAAATTTTGGTGCCTTTTTTCCTTCTGACTTTACTCGATGCAGCTTTTCATTGTGCATCTTTCGCAGGTTGTTACTCGAGCAATGGATTTTTAATTACTTTTGAACATCTTGAATTAGTGATTGATCATCTTTTATGTGTAAAGGTTGATTGATCTCCTCAGCATACGATGTCGTATCTATGTTCGTTTAGGGTGTTGTTTTTTTTTATGGTCACATGCTCAACATGTCCTCTCTTGTTCTAAGTTCGATTTTATTTATTATATAGAGCTTTAAGGATTAGTGCCTCTCCACC ATGTTCAAGGAAGCGGGCGGTTGTAGAAGCATGGTGAAGGGTGGTGAGATTAATTCGTCTAGGGGTCTTCGATATAGGTCCTCTCTACATCAACAAGCAAATTTGAGAAATGCTGCTCAACGTTATTGCTTCTCATCCATCGTCAGACAATGTGCTGGCGTCTCTTGGTGTTATCTTACTCCGAACAAAAATCTATACAATCCTTGGTACAACAAATTGCTTAGTGGAAAAAGAAACCCCCGGTACGTCCTTGTTAGGTCAGGAGTTGCAAAAATGGGAACTCATGAAGCTGGTTATCCATTATCAGAAGTACCATTGAGCTCAAAAGTCAGAGGAGCATGCTTTTATGCTACTACTGCAATTACTGCTATTTTTCTCTTTATGCTTATGCTGGGGGCACATCCAATTGTGTTATTGATGGATAGATACCGCAGAAGAATTCATTACACAATTGCTAAAATGTGGGCAAGTTTGAGCATCGCTCCATTTTTTAGGATCAAATATGAAGGGTTGGAGAATTTGCCCTCTTCAAATTCTCCTGCTGTGTACGTTTCCAACCATCAGAGCTTTCTAGACATATATACACTTCTTACCCTTGGCAGAAGCTTTAAGTTCATTAGCAAGACTGCAATATTTCTCTTTCCAATTATTGGTTGGGCTATGTTTATGATGGGTGTCATTCCTTTGAAGCGCATGGATAGCAGAAGCCAATTGGACTGTCTGAAGCAGTGCATGGAGCTTATAAGGAAGGGTGCATCTGTATTTTTCTTTCCTGAGGGAACGCGTAGTAAGGATGGAAAATTAGGTGCTTTCAAGAAAGGAGCATTCAGTGTTGCAGCAAAGACCAAAGTGCCCGTTGTACCCATTACACTCATGGGAACTGGTAGCATTATGCCACCGGGATTTGAAGGGATCTTGAATATGGGATCCGTGAAAGTCGTTATCCACAAGCCTGTCGTCGGAATTGATCCAGAAGCATTGTGTAATGAAGCTAGAAATGTAATTGCAGATGCCCTGAGTAAACAATGTTGA MFKEAGGCRSMVKGGEINSSRGLRYRSSLHQQANLRNAAQRYCFSSIVRQCAGVSWCYLTPNKNLYNPWYNKLLSGKRNPRYVLVRSGVAKMGTHEAGYPLSEVPLSSKVRGACFYATTAITAIFLFMLMLGAHPIVLLMDRYRRRIHYTIAKMWASLSIAPFFRIKYEGLENLPSSNSPAVYVSNHQSFLDIYTLLTLGRSFKFISKTAIFLFPIIGWAMFMMGVIPLKRMDSRSQLDCLKQCMELIRKGASVFFFPEGTRSKDGKLGAFKKGAFSVAAKTKVPVVPITLMGTGSIMPPGFEGILNMGSVKVVIHKPVVGIDPEALCNEARNVIADALSKQC
BLAST of CmaCh09G012110 vs. Swiss-Prot
Match: LPAT1_BRANA (1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic OS=Brassica napus GN=LPAT1 PE=2 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 1.6e-100 Identity = 188/333 (56.46%), Postives = 240/333 (72.07%), Query Frame = 1
BLAST of CmaCh09G012110 vs. Swiss-Prot
Match: LPAT1_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic OS=Arabidopsis thaliana GN=LPAT1 PE=2 SV=1) HSP 1 Score: 353.2 bits (905), Expect = 3.2e-96 Identity = 176/287 (61.32%), Postives = 221/287 (77.00%), Query Frame = 1
BLAST of CmaCh09G012110 vs. Swiss-Prot
Match: PLSC_YEAST (Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SLC1 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 8.6e-17 Identity = 61/181 (33.70%), Postives = 97/181 (53.59%), Query Frame = 1
BLAST of CmaCh09G012110 vs. Swiss-Prot
Match: PLSC_BORBU (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP 102532 / DSM 4680) GN=plsC PE=3 SV=2) HSP 1 Score: 78.2 bits (191), Expect = 2.0e-13 Identity = 54/198 (27.27%), Postives = 99/198 (50.00%), Query Frame = 1
BLAST of CmaCh09G012110 vs. Swiss-Prot
Match: PLSC_COCNU (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cocos nucifera PE=1 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 4.4e-13 Identity = 58/189 (30.69%), Postives = 95/189 (50.26%), Query Frame = 1
BLAST of CmaCh09G012110 vs. TrEMBL
Match: A0A0A0LHA4_CUCSA (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucumis sativus GN=Csa_2G059790 PE=3 SV=1) HSP 1 Score: 560.5 bits (1443), Expect = 1.5e-156 Identity = 283/325 (87.08%), Postives = 300/325 (92.31%), Query Frame = 1
BLAST of CmaCh09G012110 vs. TrEMBL
Match: A0A0A0L137_CUCSA (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucumis sativus GN=Csa_4G476190 PE=3 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 1.0e-125 Identity = 231/250 (92.40%), Postives = 239/250 (95.60%), Query Frame = 1
BLAST of CmaCh09G012110 vs. TrEMBL
Match: F6HYJ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00250 PE=4 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 4.0e-114 Identity = 211/326 (64.72%), Postives = 264/326 (80.98%), Query Frame = 1
BLAST of CmaCh09G012110 vs. TrEMBL
Match: A0A061GK44_THECC (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Theobroma cacao GN=TCM_037041 PE=3 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 3.8e-112 Identity = 215/329 (65.35%), Postives = 250/329 (75.99%), Query Frame = 1
BLAST of CmaCh09G012110 vs. TrEMBL
Match: A0A061GI22_THECC (1-acyl-sn-glycerol-3-phosphate acyltransferase (Fragment) OS=Theobroma cacao GN=TCM_037041 PE=3 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 3.8e-112 Identity = 215/329 (65.35%), Postives = 250/329 (75.99%), Query Frame = 1
BLAST of CmaCh09G012110 vs. TAIR10
Match: AT4G30580.1 (AT4G30580.1 Phospholipid/glycerol acyltransferase family protein) HSP 1 Score: 353.2 bits (905), Expect = 1.8e-97 Identity = 176/287 (61.32%), Postives = 221/287 (77.00%), Query Frame = 1
BLAST of CmaCh09G012110 vs. NCBI nr
Match: gi|778694861|ref|XP_011653882.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 573.9 bits (1478), Expect = 1.8e-160 Identity = 284/325 (87.38%), Postives = 302/325 (92.92%), Query Frame = 1
BLAST of CmaCh09G012110 vs. NCBI nr
Match: gi|659083074|ref|XP_008442171.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 565.1 bits (1455), Expect = 8.5e-158 Identity = 282/325 (86.77%), Postives = 300/325 (92.31%), Query Frame = 1
BLAST of CmaCh09G012110 vs. NCBI nr
Match: gi|778667480|ref|XP_011648932.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucumis sativus]) HSP 1 Score: 560.5 bits (1443), Expect = 2.1e-156 Identity = 283/325 (87.08%), Postives = 300/325 (92.31%), Query Frame = 1
BLAST of CmaCh09G012110 vs. NCBI nr
Match: gi|659083076|ref|XP_008442172.1| (PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 543.1 bits (1398), Expect = 3.5e-151 Identity = 269/303 (88.78%), Postives = 285/303 (94.06%), Query Frame = 1
BLAST of CmaCh09G012110 vs. NCBI nr
Match: gi|700199611|gb|KGN54769.1| (hypothetical protein Csa_4G476190 [Cucumis sativus]) HSP 1 Score: 458.0 bits (1177), Expect = 1.5e-125 Identity = 231/250 (92.40%), Postives = 239/250 (95.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|