CmaCh09G011950 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G011950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Serine/threonine-protein kinase
Location	Cma_Chr09 : 7701112 .. 7701453 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTGCGCGCAAGCGAAGCATTCGATGAATTCACCTAATGGGGGAATTCAGAGCCTGAAATTGGAAAATGGGTATGTTGGGATTGGGGATTTTAATGCTCATCGGAGGCCAGCGGCGCAGAGGAGATTTGTCAACAGGGAGGCCTCTGAAGCAGTGAACTCCCACGGTTGTGATGGCGGCGGCGGTAATGGCGGATTAGGTTTAGAGAAGAGTGAGGTGGTGGTGGATGGATGGCCCAAATGGCTTACTAGCAATATTCCTAAGCATGTGTTGGCTGGCTTGGTTCCCAAGAGTGTGGAGGCCTATGACAAGCTTGATAAGGTTGTCCTTCTTTTTTAG

mRNA sequence

ATGGGCTGCGCGCAAGCGAAGCATTCGATGAATTCACCTAATGGGGGAATTCAGAGCCTGAAATTGGAAAATGGGTATGTTGGGATTGGGGATTTTAATGCTCATCGGAGGCCAGCGGCGCAGAGGAGATTTGTCAACAGGGAGGCCTCTGAAGCAGTGAACTCCCACGGTTGTGATGGCGGCGGCGGTAATGGCGGATTAGGTTTAGAGAAGAGTGAGGTGGTGGTGGATGGATGGCCCAAATGGCTTACTAGCAATATTCCTAAGCATGTGTTGGCTGGCTTGGTTCCCAAGAGTGTGGAGGCCTATGACAAGCTTGATAAGGTTGTCCTTCTTTTTTAG

Coding sequence (CDS)

ATGGGCTGCGCGCAAGCGAAGCATTCGATGAATTCACCTAATGGGGGAATTCAGAGCCTGAAATTGGAAAATGGGTATGTTGGGATTGGGGATTTTAATGCTCATCGGAGGCCAGCGGCGCAGAGGAGATTTGTCAACAGGGAGGCCTCTGAAGCAGTGAACTCCCACGGTTGTGATGGCGGCGGCGGTAATGGCGGATTAGGTTTAGAGAAGAGTGAGGTGGTGGTGGATGGATGGCCCAAATGGCTTACTAGCAATATTCCTAAGCATGTGTTGGCTGGCTTGGTTCCCAAGAGTGTGGAGGCCTATGACAAGCTTGATAAGGTTGTCCTTCTTTTTTAG

Protein sequence

MGCAQAKHSMNSPNGGIQSLKLENGYVGIGDFNAHRRPAAQRRFVNREASEAVNSHGCDGGGGNGGLGLEKSEVVVDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKVVLLF

Homology

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BLAST of CmaCh09G011950 vs. TrEMBL
Match: A0A0A0K805_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G018600 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.1e-35
Identity = 78/109 (71.56%), Postives = 85/109 (77.98%), Query Frame = 1


Query: 1   MGCAQAKHSMNSPNGGIQSLKLENGYVGIGDFNAHRRPAAQRRFVNREASEAVNSHGCDG 60
           MGCAQ KHS+NSP GG++ LKL+NGY GI  F AHRR   QRRFV RE+SEA   H    
Sbjct: 1   MGCAQTKHSVNSPAGGVEKLKLDNGYAGIDGFVAHRRSVGQRRFVGRESSEAERPH---- 60

Query: 61  GGGNGGLGLEKSEVVVDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV 110
           GGGN   G + SE +VDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV
Sbjct: 61  GGGNDQFGSDNSE-LVDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV 104

[Close]

BLAST of CmaCh09G011950 vs. TrEMBL
Match: A0A067KKA1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08334 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.5e-21
Identity = 64/141 (45.39%), Postives = 75/141 (53.19%), Query Frame = 1


Query: 1   MGCAQAKHSMNSPNGGIQSLKLENGYVGIGDFNAHRRPAAQR-----RFVNREASEAVNS 60
           MGCAQAK+S NSP+ G+Q LK+ENGYVG G F A RR   QR     +  N E     N 
Sbjct: 1   MGCAQAKYSTNSPSKGLQRLKMENGYVGNGGFAARRRSTGQRYSGRGKLNNSEPPPPRNY 60

Query: 61  HG--------CDGGGGNGGLGLEKSEV-------------------VVDGWPKWLTSNIP 110
           +G          G GG+  L     E                    VVDGWPKWLT N+P
Sbjct: 61  NGGGLLGRGDTGGTGGDSKLSYGNGEKDCIDVVRRNDKVFVVDGVQVVDGWPKWLTDNVP 120

[Close]

BLAST of CmaCh09G011950 vs. TrEMBL
Match: A0A0D2UBG0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G131900 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.2e-20
Identity = 60/126 (47.62%), Postives = 69/126 (54.76%), Query Frame = 1


Query: 1   MGCAQAKHSMNSPNGGIQSLKLENGYVGIGDFNAHRRPAAQR-----RFVNREASEAVNS 60
           MGC Q K+ M SP  G++ LK+ENGY G G F AHRR   QR     R    E  + +N 
Sbjct: 1   MGCVQGKNPMKSPPRGLEKLKMENGYKGKGAFAAHRRSTGQRYTDPDRVHRPEPPKKLNG 60

Query: 61  HGCDGGGGNGGLGLEKSEVV------------VDGWPKWLTSNIPKHVLAGLVPKSVEAY 110
            G   G   G      +E V            VDGWPKWL  NIPK VLAGLVPKS E+Y
Sbjct: 61  FGSADGVVAGKEKESSNETVERRNVLVAGDEMVDGWPKWLIDNIPKEVLAGLVPKSAESY 120

[Close]

BLAST of CmaCh09G011950 vs. TrEMBL
Match: M5W215_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016602mg PE=3 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 9.4e-20
Identity = 61/132 (46.21%), Postives = 75/132 (56.82%), Query Frame = 1


Query: 1   MGCAQAKHSMNSPNGGIQSLKLENGYVGIGDFNAHRRPAAQ--RRFVNREASEAVNSH-- 60
           MGC QAK   NS  GG++ LKLENGYVG G  NAHRR   Q  R  + +   E + S+  
Sbjct: 1   MGCVQAKPLTNSTPGGLEKLKLENGYVGNGGVNAHRRSTGQPQRDSLKQHRHEPIISNAE 60

Query: 61  ----------------GCDGGGGNGGLGLEKS---EVVVDGWPKWLTSNIPKHVLAGLVP 110
                           G DG   +G +  + S   E +VDGWPKWLT NI + +LAGLVP
Sbjct: 61  PGSRNEKAGDEWVVLTGSDGDKDDGHVSHKVSVDEEELVDGWPKWLTDNISREILAGLVP 120

[Close]

BLAST of CmaCh09G011950 vs. TrEMBL
Match: A0A067GVP5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043957mg PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-19
Identity = 62/135 (45.93%), Postives = 74/135 (54.81%), Query Frame = 1


Query: 1   MGCAQAKHSMNSPN--GGIQSLKLENGYVGIGDFNAHRRPAAQR-------RFVNRE--- 60
           MGC QAK SMNSP+  GG+  LK+ENGYVG      HRR   QR       RF   E   
Sbjct: 1   MGCVQAKSSMNSPHGGGGLYKLKMENGYVGNKALMGHRRSTGQRYNGKETGRFQKLELPV 60

Query: 61  --------------ASEAVNSHGCDGGGGNGGLGLEKSEVVVDGWPKWLTSNIPKHVLAG 110
                           + V  +G   G G  G G++    +V+GWPKWLT NIP+ VLAG
Sbjct: 61  NYDDFENGGEEKVSGEQRVRDNGTGTGTGKSGGGVDGK--LVNGWPKWLTDNIPREVLAG 120

[Close]

BLAST of CmaCh09G011950 vs. NCBI nr
Match: gi|449441187|ref|XP_004138365.1| (PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Cucumis sativus])

HSP 1 Score: 156.4 bits (394), Expect = 3.0e-35
Identity = 78/109 (71.56%), Postives = 85/109 (77.98%), Query Frame = 1


Query: 1   MGCAQAKHSMNSPNGGIQSLKLENGYVGIGDFNAHRRPAAQRRFVNREASEAVNSHGCDG 60
           MGCAQ KHS+NSP GG++ LKL+NGY GI  F AHRR   QRRFV RE+SEA   H    
Sbjct: 1   MGCAQTKHSVNSPAGGVEKLKLDNGYAGIDGFVAHRRSVGQRRFVGRESSEAERPH---- 60

Query: 61  GGGNGGLGLEKSEVVVDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV 110
           GGGN   G + SE +VDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV
Sbjct: 61  GGGNDQFGSDNSE-LVDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV 104

[Close]

BLAST of CmaCh09G011950 vs. NCBI nr
Match: gi|778709873|ref|XP_011656469.1| (PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X2 [Cucumis sativus])

HSP 1 Score: 156.4 bits (394), Expect = 3.0e-35
Identity = 78/109 (71.56%), Postives = 85/109 (77.98%), Query Frame = 1


Query: 1   MGCAQAKHSMNSPNGGIQSLKLENGYVGIGDFNAHRRPAAQRRFVNREASEAVNSHGCDG 60
           MGCAQ KHS+NSP GG++ LKL+NGY GI  F AHRR   QRRFV RE+SEA   H    
Sbjct: 1   MGCAQTKHSVNSPAGGVEKLKLDNGYAGIDGFVAHRRSVGQRRFVGRESSEAERPH---- 60

Query: 61  GGGNGGLGLEKSEVVVDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV 110
           GGGN   G + SE +VDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV
Sbjct: 61  GGGNDQFGSDNSE-LVDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV 104

[Close]

BLAST of CmaCh09G011950 vs. NCBI nr
Match: gi|659126176|ref|XP_008463051.1| (PREDICTED: probable serine/threonine-protein kinase At1g54610 [Cucumis melo])

HSP 1 Score: 152.9 bits (385), Expect = 3.3e-34
Identity = 75/109 (68.81%), Postives = 85/109 (77.98%), Query Frame = 1


Query: 1   MGCAQAKHSMNSPNGGIQSLKLENGYVGIGDFNAHRRPAAQRRFVNREASEAVNSHGCDG 60
           MGCAQ KHS+NSP+GG++ LKL+NGY GI  F AHRR   Q+RFV +E+SEA   H    
Sbjct: 1   MGCAQTKHSVNSPSGGVEKLKLDNGYAGIDGFIAHRRSVGQKRFVGKESSEAERPH---- 60

Query: 61  GGGNGGLGLEKSEVVVDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV 110
           G GN   G + SE +VDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV
Sbjct: 61  GSGNDQFGSDNSE-LVDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV 104

[Close]

BLAST of CmaCh09G011950 vs. NCBI nr
Match: gi|802607748|ref|XP_012073966.1| (PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas])

HSP 1 Score: 111.7 bits (278), Expect = 8.5e-22
Identity = 59/115 (51.30%), Postives = 72/115 (62.61%), Query Frame = 1


Query: 1   MGCAQAKHSMNSPNGGIQSLKLENGYVGIGDFNAHRRPAAQRRFVNREASEAVNSHG--- 60
           MGCAQAK+S NSP+ G+Q LK+ENGYVG G F A RR   QR        ++  S+G   
Sbjct: 1   MGCAQAKYSTNSPSKGLQRLKMENGYVGNGGFAARRRSTGQRGDTGGTGGDSKLSYGNGE 60

Query: 61  ---CDGGGGNGGLGLEKSEVVVDGWPKWLTSNIPKHVLAGLVPKSVEAYDKLDKV 110
               D    N  + +     VVDGWPKWLT N+P+ VLAGLVPKS E YDK+DK+
Sbjct: 61  KDCIDVVRRNDKVFVVDGVQVVDGWPKWLTDNVPEEVLAGLVPKSAENYDKIDKI 115

[Close]

BLAST of CmaCh09G011950 vs. NCBI nr
Match: gi|645264138|ref|XP_008237549.1| (PREDICTED: probable serine/threonine-protein kinase At1g54610 [Prunus mume])

HSP 1 Score: 108.2 bits (269), Expect = 9.4e-21
Identity = 63/132 (47.73%), Postives = 76/132 (57.58%), Query Frame = 1


Query: 1   MGCAQAKHSMNSPNGGIQSLKLENGYVGIGDFNAHRRPAAQ--RRFVNREASEAVNSH-- 60
           MGC QAK   NS  GG++ LKLENGYVG G FNAHRR   Q  R  V +   E + S+  
Sbjct: 1   MGCVQAKPLTNSTPGGLEKLKLENGYVGNGGFNAHRRSTGQPQRDSVKQHRHEPIISNAE 60

Query: 61  ----------------GCDGGGGNGGLGLEKS---EVVVDGWPKWLTSNIPKHVLAGLVP 110
                           G DG   +G +  + S   E +VDGWPKWLT NI + +LAGLVP
Sbjct: 61  PGSRNEKAGDEWVVLTGSDGDKDDGHVSHKVSVDEEELVDGWPKWLTDNISREILAGLVP 120

The following BLAST results are available for this feature:

BLAST of CmaCh09G011950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh09G011950 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K805_CUCSA	2.1e-35	71.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G018600 PE=3 SV=1	[more]
A0A067KKA1_JATCU	8.5e-21	45.39	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08334 PE=3 SV=1	[more]
A0A0D2UBG0_GOSRA	7.2e-20	47.62	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G131900 PE=3 SV=1	[more]
M5W215_PRUPE	9.4e-20	46.21	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016602mg PE=3 SV=1	[more]
A0A067GVP5_CITSI	1.2e-19	45.93	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043957mg PE=3 SV=1	[more]

BLAST of CmaCh09G011950 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh09G011950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441187\|ref\|XP_004138365.1\|	3.0e-35	71.56	PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Cucumi...	[more]
gi\|778709873\|ref\|XP_011656469.1\|	3.0e-35	71.56	PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X2 [Cucumi...	[more]
gi\|659126176\|ref\|XP_008463051.1\|	3.3e-34	68.81	PREDICTED: probable serine/threonine-protein kinase At1g54610 [Cucumis melo]	[more]
gi\|802607748\|ref\|XP_012073966.1\|	8.5e-22	51.30	PREDICTED: probable serine/threonine-protein kinase At1g54610 [Jatropha curcas]	[more]
gi\|645264138\|ref\|XP_008237549.1\|	9.4e-21	47.73	PREDICTED: probable serine/threonine-protein kinase At1g54610 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G011950.1	CmaCh09G011950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24056	CELL DIVISION PROTEIN KINASE	coord: 73..109 score: 8.2
None	No IPR available	PANTHER	PTHR24056:SF221	SUBFAMILY NOT NAMED	coord: 73..109 score: 8.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G011950	CmoCh09G012130	Cucurbita moschata (Rifu)	cmacmoB030
CmaCh09G011950	Lsi08G002530	Bottle gourd (USVL1VR-Ls)	cmalsiB043
CmaCh09G011950	Cp4.1LG06g09660	Cucurbita pepo (Zucchini)	cmacpeB064
CmaCh09G011950	CsaV3_6G002860	Cucumber (Chinese Long) v3	cmacucB0047
CmaCh09G011950	Cla97C08G146850	Watermelon (97103) v2	cmawmbB040
CmaCh09G011950	Carg27056	Silver-seed gourd	carcmaB0036

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G011950	Watermelon (Charleston Gray)	cmawcgB035
CmaCh09G011950	Watermelon (Charleston Gray)	cmawcgB039
CmaCh09G011950	Watermelon (97103) v1	cmawmB016
CmaCh09G011950	Cucurbita pepo (Zucchini)	cmacpeB046
CmaCh09G011950	Watermelon (97103) v2	cmawmbB046
CmaCh09G011950	Cucurbita maxima (Rimu)	cmacmaB056
CmaCh09G011950	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G011950	Cucurbita moschata (Rifu)	cmacmoB056