CmaCh09G011750 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G011750
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionTransposon Ty1-H Gag-Pol polyprotein
LocationCma_Chr09 : 7249106 .. 7252851 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCTACTTGGGATGATAGTGATGAAAGTGCAAGTGGAAGTGATGAAGAAGTTGCAAATTTTTGCTTCATGGCTCATAGTGACAAAGAGGATGAACAAGAAGATGAACAAGAAGATGAGGTAACTCTTGAATCTCTTTCTTATCATGAATTATTTAAACTTGTTGATGAGATGACAATTGATTTAGAAAAACTTAGTTCAAAGTATGTTGTGCTTAAAAAGAAATATAAGACTTCAATTATTGAAAATAAGTCTTTGCTAAATGAAATTTCTTGCTTGAAGGAGAAGGATCATAATATTGTTAAAATTGATGTACCTTGTGAAAAGCATGTATTTGATTGTGATGAGAAAAATGCATTAATTGATAAAGTCAAGACTCTTGAGCATGATTGTGGTGAAAAAGATAAATTAATTAAATTGCTCAAAGAGAATGAATCAAATAATTTGCAAGAACTTGGTAGGGCTAAGGAATCTATTAAAATGTTAACAATAGGTGCTCAAAAATTAGATAAAATACTTGAAGGAGGTAAGTCATATGGTGATAAAAGAGGATTAGGCTATATTGATGAATGTTCTACACCTTCAAGTTCTAAAACAATCTTTGTTAAAGCATCCCCTATCTTGCCTAAATCTAACACATGTAAATTTGTATCTAAGTATGATAAATCTAGATTTGTGCCTATATGTCATTATTGTGGTGTTGAAGGTCATATTAGACCTAAGTGCTTTAAATTGAAAAATTCTCAAAATATTCATTTAGGAAGAAAAGTTTCTCAAAATACAAAGTTTAACAATGTTTTAGAAAATAATTTTTCGAATAAAAATAGAATACACAAATTTAGTCCAAGAAATAAATTCTTGCATAATGTCGTTTGTTTCTCGTGTGGTAAGTTTGGACATAAAGATTATTCTTGTTACTTATCTAAATACAATGTCTTTAATATGAATGCAAATATGAAATGGATTCCTAAATTTGTGAATACTAACTTTCTAGGACCCAAACAAGTATGGGTACCAAAAGGTCAATTTTGAATATCTTTGTTTTTAGGTTTGTTTGAAAGCCTCCAAGAAAAATAAGTGGTACTTGGATAGTGGTTGCTCAAGACACATGACGGGTAATCCATCCAAGTTTGTCAATCTTTCCAAGAAGGATGGTGGCTTAGTAACCTTTGGTGATAACAAGAAGGGTAAAATAATTGGTAAGGGTACTATAGGTAATGACTCTTGTACTCTCATTAAAAATGTATTGTTAGTTGATGGTTTAAAGCATGACTTACTTAGCATTAGTCAATTATGTGATAAAGGTTTTAGAGTTGTATTTGATAAGAATAATTGCATAATTGAAAATGCTAGTGATAGAAAAGTTTTGTTTGTAGGAAATAGAGACGATAATGTGTATACTATTGATTTGAATGATTGTCCTACAAATGATAAATGTCTTTCGGTTTTGCTTGATAACTCTTGGCTATGGCATAGAAGACTAGGACATGCCAGTATGTACTTGATTTCAAATATTTCAAAAAATTCATTAGTGAGAGGTCTCCCTCAACTTAAATTTGAAAAAGATAAAATTTGTGACGCTTGTCAAATGGGTAAGCAAACTAAGTCTTCTTTCAAATCTAAAAATATGATTTCTACTACTAGACCTCTTCAACTACTCCATATAGACTTATTTGGCCCTTCTAAAATAGCTAGTTATGGAGGAAATTATTATGCTTTTGTGATAGTGGATGATTTTTCAAGATTTACTTGGGTTTTGATGATAAAACATAAGAATGATGTTTTGAAAAGATTTGCTAGTTTTGTAAAAAGAGTTCAAAATGAAAAAGGGTTTTTAATTACTAAAATTAGGAGTGACCATGGGGGAGAATTTAACAGTGTTGCCTTTGAAAAATTTTGTGAAGATAATGGTTTTTCTCATGACTTCTCCTCTCCAAGGACTCCTCAACAAAACGGTGTGGTTGAAAGGAAAAATCGTACTTTACAAGAATTTGCTAGATCAATGTTAAATGAGTATGATTTACCTAAATATTTTTGGGCGGAAGCCGTTAATACCGCTTGTTATATTTTAAATAGAGTTTTAATTAGACCTTCATTAAATAAAACTCCTTATGAACTCTGGCATAACAAAATTCCAAATGTTGGGTATTTCAAAGTTTTTGGTTGTAAATGTTTTATTTTGAACAACAAAGAAAAGCTTGGAAAGTTTGATTCAAAAACGGATATTGGTATTTTTCTTGGCTATTCATCTACTAGTAAAGCTTATAGAATTTTCAATAAGAGAACTTTAGTTATTGAAGAATCTATGCATGTGGTATTTGATGAATCTTGCAATAATATTTCTAATGAGTCTATTTGTAGTGATGATTTAGAAAGAAATTTTGGAGATTTACTCGTTAGTGACAACGGCAAAGAAATTGTTACGAGTAAAGAAGAGATGAGCTTAAAGGAAGAAGGTTCTTCATCAATGCCAAAAGAATGGAGGTATGCCTTGTCTCATCCCAAGGACTTGATTCTTGGTGATCTCGAACAAGGTGTGAAAACTCGCTCTTCTATTAATTTATTTAATAATCTTGCTTTTGTTTCTCAAATTGAACCAAAAAGTCTTAAGGATGCCGAAAATGATGAGTTTTGGATTTTAGCCATGCAAGAAGAGCTAAATCAATTTGAAAGGAACAAAGTTTGGGAATTAGTCCATAGGCCATCTAATACTTCTATTATTGGAACCAAATGGGTTTTTAGAAATAAAATGGATGAAAATGGGAATATCATTAGAAATAAAGCTAGGCTTGTAGCTCAAGGTTATTGTCAAGAGGAAGGCATAGATTATGAAGAAACTTTTGCACCCGTTGCTAGATTAGAAGCTATTAGAATGTTACTTGCTTTTGCTTCTTACAAAAATTTTGTATTATATCAAATGGATGTGAAAAGTGCATTTTTGAATGGTTATATTATGGAGGAAGTTTATGTAGAACAACCTCCCGGATTTGAAAATGTAGAATTTCCTCATCATGTCTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGGTATGATAGACTTAGTAATTTTCTTATTGGGAATGATTTTAAAATGGGCAAACTCGACACTACACTCTTTATTAAGATTAAAGAAAACGATATGCTATTAGTGCAAATATATGTGGATGATATCATATTTGGTTCTACTAATCCTTCTTTATGTGAAGAATTTTCTAAATGTATGCATAGTGAGTTTGAGATGAGTATGATGGGAGAACTCAGTTTCTTTCTTGGACTTCAAATCAAACAACTCAAGAATGGTATCTTCATCAATCAAGAGAAATACACTAAAGATTTGCTCAAAAGATTCAAGTTCAATGGAGGTAAGATTGCAAGAACTCCCATGAGCACATCCACTAAGCTTGACAAGGATGAAAAAGGTAAAAGTGTGGATATTAAAGCTTATCGAGGTATGATTGGATCTTTACTTTACTTGACCGCTAGTAGACCCGATATTATGTTTAGTGTATGTCTTTGTGCTAGATTTCAATCCTGTCCTAAGGAATCTCATTTACATGCCGTTAAGAGAATATTTAAATATTTGCTTGGAACTATTGATCTAGGATTGTGGTATCCTAGAAATGTTGAATTTAAATTGGTAGGATATTCTGATGCAGATTTTGCCGGAAGCTTACTTGATCGTAAAAGTACTAGTGGAACTTGTCAATTTCTTGGTAGTTCCTTAG

mRNA sequence

ATGAAGGCTACTTGGGATGATAGTGATGAAAGTGCAAGTGGAAGTGATGAAGAAGTTGCAAATTTTTGCTTCATGGCTCATAGTGACAAAGAGGATGAACAAGAAGATGAACAAGAAGATGAGGTTTGTTTGAAAGCCTCCAAGAAAAATAAGTGGTACTTGGATAGTGGTTGCTCAAGACACATGACGGGTAATCCATCCAAGTTTGTCAATCTTTCCAAGAAGGATGGTGGCTTAGTAACCTTTGGTGATAACAAGAAGGGTAAAATAATTGGTAAGGGTACTATAGGAAATAGAGACGATAATGTGTATACTATTGATTTGAATGATTGTCCTACAAATGATAAATGTCTTTCGGTTTTGCTTGATAACTCTTGGCTATGGCATAGAAGACTAGGACATGCCAAAAGAAATTTTGGAGATTTACTCGTTAGTGACAACGGCAAAGAAATTGTTACGAGTAAAGAAGAGATGAGCTTAAAGGAAGAAGGTTCTTCATCAATGCCAAAAGAATGGAGGTATGCCTTGTCTCATCCCAAGGACTTGATTCTTGGTGATCTCGAACAAGGTGTGAAAACTCGCTCTTCTATTAATTTATTTAATAATCTTGCTTTTGTTTCTCAAATTGAACCAAAAAGTCTTAAGGATGCCGAAAATGATGAGTTTTGGATTTTAGCCATGCAAGAAGAGCTAAATCAATTTGAAAGGAACAAAGTTTGGGAATTAGTCCATAGGCCATCTAATACTTCTATTATTGGAACCAAATGGGTTTTTAGAAATAAAATGGATGAAAATGGGAATATCATTAGAAATAAAGCTAGGCTTGTAGCTCAAGGTTATTGTCAAGAGGAAGGCATAGATTATGAAGAAACTTTTGCACCCGTTGCTAGATTAGAAGCTATTAGAATGTTACTTGCTTTTGCTTCTTACAAAAATTTTGTATTATATCAAATGGATGTGAAAAGTGCATTTTTGAATGGTTATATTATGGAGGAAGTTTATGTAGAACAACCTCCCGGATTTGAAAATGTAGAATTTCCTCATCATGTCTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGTGAGTTTGAGATGAGTATGATGGGAGAACTCAGTTTCTTTCTTGGACTTCAAATCAAACAACTCAAGAATGGTATCTTCATCAATCAAGAGAAATACACTAAAGATTTGCTCAAAAGATTCAAGTTCAATGGAGGTAAGATTGCAAGAACTCCCATGAGCACATCCACTAAGCTTGACAAGGATGAAAAAGGTAAAAGTGTGGATATTAAAGCTTATCGAGGTATGATTGGATCTTTACTTTACTTGACCGCTAGTAGACCCGATATTATGTTTAGTGATATTCTGATGCAGATTTTGCCGGAAGCTTACTTGATCGTAAAAGTACTAGTGGAACTTGTCAATTTCTTGGTAGTTCCTTAG

Coding sequence (CDS)

ATGAAGGCTACTTGGGATGATAGTGATGAAAGTGCAAGTGGAAGTGATGAAGAAGTTGCAAATTTTTGCTTCATGGCTCATAGTGACAAAGAGGATGAACAAGAAGATGAACAAGAAGATGAGGTTTGTTTGAAAGCCTCCAAGAAAAATAAGTGGTACTTGGATAGTGGTTGCTCAAGACACATGACGGGTAATCCATCCAAGTTTGTCAATCTTTCCAAGAAGGATGGTGGCTTAGTAACCTTTGGTGATAACAAGAAGGGTAAAATAATTGGTAAGGGTACTATAGGAAATAGAGACGATAATGTGTATACTATTGATTTGAATGATTGTCCTACAAATGATAAATGTCTTTCGGTTTTGCTTGATAACTCTTGGCTATGGCATAGAAGACTAGGACATGCCAAAAGAAATTTTGGAGATTTACTCGTTAGTGACAACGGCAAAGAAATTGTTACGAGTAAAGAAGAGATGAGCTTAAAGGAAGAAGGTTCTTCATCAATGCCAAAAGAATGGAGGTATGCCTTGTCTCATCCCAAGGACTTGATTCTTGGTGATCTCGAACAAGGTGTGAAAACTCGCTCTTCTATTAATTTATTTAATAATCTTGCTTTTGTTTCTCAAATTGAACCAAAAAGTCTTAAGGATGCCGAAAATGATGAGTTTTGGATTTTAGCCATGCAAGAAGAGCTAAATCAATTTGAAAGGAACAAAGTTTGGGAATTAGTCCATAGGCCATCTAATACTTCTATTATTGGAACCAAATGGGTTTTTAGAAATAAAATGGATGAAAATGGGAATATCATTAGAAATAAAGCTAGGCTTGTAGCTCAAGGTTATTGTCAAGAGGAAGGCATAGATTATGAAGAAACTTTTGCACCCGTTGCTAGATTAGAAGCTATTAGAATGTTACTTGCTTTTGCTTCTTACAAAAATTTTGTATTATATCAAATGGATGTGAAAAGTGCATTTTTGAATGGTTATATTATGGAGGAAGTTTATGTAGAACAACCTCCCGGATTTGAAAATGTAGAATTTCCTCATCATGTCTATAAGTTGAAAAAGGCTCTTTATGGCTTAAAACAAGCTCCAAGAGCTTGTGAGTTTGAGATGAGTATGATGGGAGAACTCAGTTTCTTTCTTGGACTTCAAATCAAACAACTCAAGAATGGTATCTTCATCAATCAAGAGAAATACACTAAAGATTTGCTCAAAAGATTCAAGTTCAATGGAGGTAAGATTGCAAGAACTCCCATGAGCACATCCACTAAGCTTGACAAGGATGAAAAAGGTAAAAGTGTGGATATTAAAGCTTATCGAGGTATGATTGGATCTTTACTTTACTTGACCGCTAGTAGACCCGATATTATGTTTAGTGATATTCTGATGCAGATTTTGCCGGAAGCTTACTTGATCGTAAAAGTACTAGTGGAACTTGTCAATTTCTTGGTAGTTCCTTAG

Protein sequence

MKATWDDSDESASGSDEEVANFCFMAHSDKEDEQEDEQEDEVCLKASKKNKWYLDSGCSRHMTGNPSKFVNLSKKDGGLVTFGDNKKGKIIGKGTIGNRDDNVYTIDLNDCPTNDKCLSVLLDNSWLWHRRLGHAKRNFGDLLVSDNGKEIVTSKEEMSLKEEGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSINLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRACEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSDILMQILPEAYLIVKVLVELVNFLVVP
Homology
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BLAST of CmaCh09G011750 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 137.9 bits (346), Expect = 3.0e-31
Identity = 73/149 (48.99%), Postives = 97/149 (65.10%), Query Frame = 1 

Query: 223  WILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQ 282
            W  A+  ELN  + N  W +  RP N +I+ ++WVF  K +E GN IR KARLVA+G+ Q
Sbjct: 906  WEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQ 965

Query: 283  EEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFE 342
            +  IDYEETFAPVAR+ + R +L+     N  ++QMDVK+AFLNG + EE+Y+  P G  
Sbjct: 966  KYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGIS 1025

Query: 343  NVEFPHHVYKLKKALYGLKQAPRACEFEM 372
                  +V KL KA+YGLKQA R C FE+
Sbjct: 1026 CNS--DNVCKLNKAIYGLKQAAR-CWFEV 1051

[Close]
BLAST of CmaCh09G011750 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 6.6e-31
Identity = 86/237 (36.29%), Postives = 133/237 (56.12%), Query Frame = 1 

Query: 210  EPKSLKDA----ENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDEN 269
            EP+SLK+     E ++  + AMQEE+   ++N  ++LV  P     +  KWVF+ K D +
Sbjct: 810  EPESLKEVLSHPEKNQL-MKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGD 869

Query: 270  GNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFL 329
              ++R KARLV +G+ Q++GID++E F+PV ++ +IR +L+ A+  +  + Q+DVK+AFL
Sbjct: 870  CKLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFL 929

Query: 330  NGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRACEFEMSMMGELSFFLG--- 389
            +G + EE+Y+EQP GFE     H V KL K+LYGLKQAPR    +     +   +L    
Sbjct: 930  HGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYS 989

Query: 390  ---LQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDI 437
               +  K+     FI    Y  D+L   K + G IA+     S   D  + G +  I
Sbjct: 990  DPCVYFKRFSENNFIILLLYVDDMLIVGK-DKGLIAKLKGDLSKSFDMKDLGPAQQI 1044

[Close]
BLAST of CmaCh09G011750 vs. Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 6.9e-20
Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 1 

Query: 192 KTRSSINLFN---NLAFVSQI--EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRP 251
           ++++ IN  N   +L   + I  EPKS+  A  D  W  AMQEEL+   RNK W LV  P
Sbjct: 4   RSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPP 63

Query: 252 SNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLA 309
            N +I+G KWVF+ K+  +G + R KARLVA+G+ QEEGI + ET++PV R   IR +L 
Sbjct: 64  VNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILN 123

[Close]
BLAST of CmaCh09G011750 vs. Swiss-Prot
Match: YE12B_YEAST (Transposon Ty1-ER2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY1B-ER2 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 5.5e-09
Identity = 48/159 (30.19%), Postives = 78/159 (49.06%), Query Frame = 1 

Query: 215  KDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSI-----IGTKWVFRNKMDENGNII 274
            KD +  E +I A  +E+NQ  + K W+         I     I + ++F  K D      
Sbjct: 1242 KDIKEKEKYIQAYHKEVNQLLKMKTWDTDRYYDRKEIDPKRVINSMFIFNRKRDGT---- 1301

Query: 275  RNKARLVAQGYCQEEGIDYEETFAPVARLE-----AIRMLLAFASYKNFVLYQMDVKSAF 334
             +KAR VA+G      I + +T+ P  +       A+   L+ A   N+ + Q+D+ SA+
Sbjct: 1302 -HKARFVARG-----DIQHPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAY 1361

Query: 335  LNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQA 364
            L   I EE+Y+  PP   ++     + +LKK+LYGLKQ+
Sbjct: 1362 LYADIKEELYIRPPP---HLGMNDKLIRLKKSLYGLKQS 1387

[Close]
BLAST of CmaCh09G011750 vs. Swiss-Prot
Match: YM14B_YEAST (Transposon Ty1-MR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY1B-MR2 PE=3 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 5.5e-09
Identity = 48/159 (30.19%), Postives = 78/159 (49.06%), Query Frame = 1 

Query: 215  KDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSI-----IGTKWVFRNKMDENGNII 274
            KD +  E +I A  +E+NQ  + K W+         I     I + ++F  K D      
Sbjct: 1242 KDIKEKEKYIQAYHKEVNQLLKMKTWDTDRYYDRKEIDPKRVINSMFIFNRKRDGT---- 1301

Query: 275  RNKARLVAQGYCQEEGIDYEETFAPVARLE-----AIRMLLAFASYKNFVLYQMDVKSAF 334
             +KAR VA+G      I + +T+ P  +       A+   L+ A   N+ + Q+D+ SA+
Sbjct: 1302 -HKARFVARG-----DIQHPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAY 1361

Query: 335  LNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQA 364
            L   I EE+Y+  PP   ++     + +LKK+LYGLKQ+
Sbjct: 1362 LYADIKEELYIRPPP---HLGMNDKLIRLKKSLYGLKQS 1387

[Close]
BLAST of CmaCh09G011750 vs. TrEMBL
Match: A5AVS9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021518 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 2.9e-118
Identity = 214/298 (71.81%), Postives = 250/298 (83.89%), Query Frame = 1 

Query: 163 EGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDE 222
           E S  +PK+W++ ++HP+D I+G+    V+TRSS+ N+ NNLAF+S IEPK++KDA  DE
Sbjct: 21  ESSQDLPKDWKFVINHPQDQIIGNPSSRVRTRSSLRNICNNLAFISHIEPKNIKDALVDE 80

Query: 223 FWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYC 282
            W+  MQEELNQFER++VWELV RP N S+IGT+WVFR KMDENG IIRNKARLVAQG+ 
Sbjct: 81  NWMTVMQEELNQFERSEVWELVPRPHNQSVIGTRWVFRIKMDENGIIIRNKARLVAQGFN 140

Query: 283 QEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGF 342
           QEEGIDYEETFAPVARLEAIRMLLAFA +K+FVLYQMDVKSAFLNG+I EEVYVEQPP F
Sbjct: 141 QEEGIDYEETFAPVARLEAIRMLLAFACFKDFVLYQMDVKSAFLNGFINEEVYVEQPPSF 200

Query: 343 ENVEFPHHVYKLKKALYGLKQAPRACEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTK 402
           ++  FP+HV++LK ALYGLKQAPRACEFEMSMMGEL+FFLGLQIKQLK G FINQ KY +
Sbjct: 201 QSFNFPNHVFRLKNALYGLKQAPRACEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIR 260

Query: 403 DLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFS 460
           D LKRF     K  +TPMS+S KLD DEKGK ++   YRGMIGSLL LTASRPDIM+S
Sbjct: 261 DPLKRFNMEEAKTMKTPMSSSIKLDMDEKGKPINSTMYRGMIGSLLNLTASRPDIMYS 318

[Close]
BLAST of CmaCh09G011750 vs. TrEMBL
Match: A5AH07_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035911 PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 4.8e-113
Identity = 215/321 (66.98%), Postives = 254/321 (79.13%), Query Frame = 1 

Query: 155 KEEMSLKEEGSSSMPKEWRYALSHPK---DLILGDLEQGVKTRSSI-NLFNNLAFVSQIE 214
           +++   +E G     +E   AL  P+   D I+G+   GV+TRSS+ N+ NNLAF+SQ E
Sbjct: 40  EDKRQQEESGEDPKKEESPLALPPPQQVQDQIIGNPSSGVRTRSSLKNICNNLAFISQTE 99

Query: 215 PKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIR 274
           PK++KDA  DE W++AMQEELN+FER++VWELV RPSN S+IGTKWVFRNKM+EN  I+R
Sbjct: 100 PKNIKDAIVDENWMIAMQEELNKFERSEVWELVPRPSNQSVIGTKWVFRNKMNENDIIVR 159

Query: 275 NKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIM 334
           NKARLVAQGY QEEGIDYE+TFAPVARLEAIRML AFA +K+F+LYQMDVKSAFLNG+I 
Sbjct: 160 NKARLVAQGYNQEEGIDYEKTFAPVARLEAIRMLRAFACFKDFILYQMDVKSAFLNGFIN 219

Query: 335 EEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA------------CEFEMSMMGELS 394
           EEVYVEQPPGF++  FP+HV+KLKK LYGLKQAP+A             EFEMSMMGEL+
Sbjct: 220 EEVYVEQPPGFQSFNFPNHVFKLKKTLYGLKQAPKAWYERLNFSKCMHSEFEMSMMGELN 279

Query: 395 FFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKA 454
           FFLGLQIKQLK G FINQ KY KDLLKRF     K+ +TPMS+S KLD DE+GKS+D   
Sbjct: 280 FFLGLQIKQLKEGTFINQAKYIKDLLKRFNMEEAKVMKTPMSSSIKLDMDERGKSIDSTM 339

Query: 455 YRGMIGSLLYLTASRPDIMFS 460
           YRGMIGSLLYLTASRPD M+S
Sbjct: 340 YRGMIGSLLYLTASRPDFMYS 360

[Close]
BLAST of CmaCh09G011750 vs. TrEMBL
Match: A5C4X7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018629 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 8.8e-107
Identity = 200/301 (66.45%), Postives = 242/301 (80.40%), Query Frame = 1 

Query: 163 EGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDE 222
           E S  +PKE ++ ++HP+D I+G+   GV+TRSS+ N+FNNLAF+SQIEPK++ +  +DE
Sbjct: 37  ESSQDLPKELKFVINHPQDQIIGNPSSGVRTRSSLRNIFNNLAFISQIEPKNINNVLDDE 96

Query: 223 FWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYC 282
            W++AMQEELNQFER++VWEL  RPSN S+IGT+WVFRNK+DENG I+RNKARLVAQG+ 
Sbjct: 97  NWMIAMQEELNQFERSEVWELAPRPSNQSVIGTRWVFRNKIDENGIIVRNKARLVAQGFN 156

Query: 283 QEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGF 342
           QE+GIDYEETFAPV RLEAIRMLLAFA +K+FVLYQM VK+AFLNG+I EEVYVEQPPGF
Sbjct: 157 QEKGIDYEETFAPVVRLEAIRMLLAFACFKDFVLYQMYVKNAFLNGFINEEVYVEQPPGF 216

Query: 343 ENVEFPHHVYKLKKALYGLKQAPRACEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTK 402
           ++  FP+HV+KLK+ALYGLKQAPRA    +S      F L +   QLK G FINQ KY +
Sbjct: 217 QSFNFPNHVFKLKRALYGLKQAPRAWYERLS-----KFLLKM---QLKEGXFINQAKYIR 276

Query: 403 DLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSDI 462
           DLLKRF     K  +TPMS+S KLDKDEK KS+    YRGMIGSLLYLTASRPDIM+S  
Sbjct: 277 DLLKRFNMEEAKTMKTPMSSSIKLDKDEKSKSIYSTMYRGMIGSLLYLTASRPDIMYSVF 329

[Close]
BLAST of CmaCh09G011750 vs. TrEMBL
Match: A5BK23_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044238 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.6e-103
Identity = 197/323 (60.99%), Postives = 239/323 (73.99%), Query Frame = 1 

Query: 163 EGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDE 222
           E S  +PK+W++ ++HP+D I+G+   GV+TRSS+ N+ NN AF+SQIEPK++ DA  DE
Sbjct: 104 ESSQDLPKDWKFVINHPQDQIIGNSSSGVRTRSSLRNICNNFAFISQIEPKNINDALVDE 163

Query: 223 FWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYC 282
            W++AMQEELNQFERN+VWELV RPSN S+IGT+WVFRNKMDEN  I+RNK+RLVAQG+ 
Sbjct: 164 NWMIAMQEELNQFERNEVWELVARPSNQSVIGTRWVFRNKMDENXIILRNKSRLVAQGFN 223

Query: 283 QEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGF 342
           QEEGIDYEETFAPVARLEAIRMLLAFA +K+FVLYQMDVKS FLN +I E VYVE PPGF
Sbjct: 224 QEEGIDYEETFAPVARLEAIRMLLAFACFKDFVLYQMDVKSXFLNDFINEXVYVEXPPGF 283

Query: 343 ENVEFPHHVYKLKKALYGLKQAPRACEFEMS--------MMGELSFFLGLQIKQ------ 402
           ++V FP+HV+KLKK LYGLK+APRA    +S         MG++   L ++ K+      
Sbjct: 284 QSVNFPNHVFKLKKTLYGLKEAPRAXNERLSKFLXKKGFKMGKIDTTLFIKTKENDMLLV 343

Query: 403 -----------LKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDI 460
                         G FINQ KY +DLLKRF     K  + PMS+S KLDKDEK KS+D 
Sbjct: 344 QIYVDDIIFGATNEGTFINQAKYIRDLLKRFNMEEAKTMKNPMSSSIKLDKDEKXKSIDS 403

[Close]
BLAST of CmaCh09G011750 vs. TrEMBL
Match: A5C8K0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001808 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 4.5e-103
Identity = 202/318 (63.52%), Postives = 243/318 (76.42%), Query Frame = 1 

Query: 173  RYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDEFWILAMQEEL 232
            ++ ++HP+D I+G+   GV+TRSS+ N+ NNLAF+SQIEPK++KDA  DE W++AMQ+EL
Sbjct: 924  KFVINHPQDQIIGNPLSGVRTRSSLRNICNNLAFISQIEPKNIKDAIVDENWMIAMQKEL 983

Query: 233  NQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEET 292
            NQFER++VWELV RPSN S+IGTKWVFRNKMDENG I+RNKARLVAQGY QEEGIDYEET
Sbjct: 984  NQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGYNQEEGIDYEET 1043

Query: 293  FAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVY 352
            FAPVARLEAIRMLLAFA +K+F+LYQMDVKSAFLNG+I EE+YVEQPPGF++  FP+HV+
Sbjct: 1044 FAPVARLEAIRMLLAFACFKDFILYQMDVKSAFLNGFINEEIYVEQPPGFQSFNFPNHVF 1103

Query: 353  KLKKALYGLKQAPRACEFEMS-MMGELSFFLG-----LQIKQLKNGIFINQ--------- 412
            KLKKALYGLKQAPRA    +S  + + SF +G     L IK  +N + + Q         
Sbjct: 1104 KLKKALYGLKQAPRAWYERLSKFLLKKSFKMGKIDTTLFIKTKENDMLLVQIYVDDITFG 1163

Query: 413  ---------------EKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRG 460
                            KY KDLLKRF     K+ +TPMS+S KLD DEKGKS+D   YRG
Sbjct: 1164 ATNDSLCEDFSKCMHTKYIKDLLKRFNMGEAKVMKTPMSSSIKLDMDEKGKSIDSTMYRG 1223

[Close]
BLAST of CmaCh09G011750 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 143.3 bits (360), Expect = 4.0e-34
Identity = 72/172 (41.86%), Postives = 112/172 (65.12%), Query Frame = 1 

Query: 210 EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNII 269
           EP +  +A+    W  AM +E+   E    WE+   P N   IG KWV++ K + +G I 
Sbjct: 85  EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144

Query: 270 RNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYI 329
           R KARLVA+GY Q+EGID+ ETF+PV +L +++++LA ++  NF L+Q+D+ +AFLNG +
Sbjct: 145 RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204

Query: 330 MEEVYVEQPPGFENVEF----PHHVYKLKKALYGLKQAPRA--CEFEMSMMG 376
            EE+Y++ PPG+   +     P+ V  LKK++YGLKQA R    +F ++++G
Sbjct: 205 DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIG 256

[Close]
BLAST of CmaCh09G011750 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 100.1 bits (248), Expect = 3.9e-21
Identity = 56/122 (45.90%), Postives = 76/122 (62.30%), Query Frame = 1 

Query: 192 KTRSSINLFN---NLAFVSQI--EPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRP 251
           ++++ IN  N   +L   + I  EPKS+  A  D  W  AMQEEL+   RNK W LV  P
Sbjct: 4   RSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPP 63

Query: 252 SNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLA 309
            N +I+G KWVF+ K+  +G + R KARLVA+G+ QEEGI + ET++PV R   IR +L 
Sbjct: 64  VNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILN 123

[Close]
BLAST of CmaCh09G011750 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 4.4e-09
Identity = 38/107 (35.51%), Postives = 60/107 (56.07%), Query Frame = 1 

Query: 369 FEMSMMGELSFFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKD 428
           F M  +G + +FLG+QIK   +G+F++Q KY + +L     N G +   PMST   L  +
Sbjct: 31  FSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILN----NAGMLDCKPMSTPLPLKLN 90

Query: 429 EK---GKSVDIKAYRGMIGSLLYLTASRPDIMFS-DILMQILPEAYL 472
                 K  D   +R ++G+L YLT +RPDI ++ +I+ Q + E  L
Sbjct: 91  SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTL 133

[Close]
BLAST of CmaCh09G011750 vs. NCBI nr
Match: gi|147778546|emb|CAN62895.1| (hypothetical protein VITISV_021518 [Vitis vinifera])

HSP 1 Score: 433.7 bits (1114), Expect = 4.2e-118
Identity = 214/298 (71.81%), Postives = 250/298 (83.89%), Query Frame = 1 

Query: 163 EGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDE 222
           E S  +PK+W++ ++HP+D I+G+    V+TRSS+ N+ NNLAF+S IEPK++KDA  DE
Sbjct: 21  ESSQDLPKDWKFVINHPQDQIIGNPSSRVRTRSSLRNICNNLAFISHIEPKNIKDALVDE 80

Query: 223 FWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYC 282
            W+  MQEELNQFER++VWELV RP N S+IGT+WVFR KMDENG IIRNKARLVAQG+ 
Sbjct: 81  NWMTVMQEELNQFERSEVWELVPRPHNQSVIGTRWVFRIKMDENGIIIRNKARLVAQGFN 140

Query: 283 QEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGF 342
           QEEGIDYEETFAPVARLEAIRMLLAFA +K+FVLYQMDVKSAFLNG+I EEVYVEQPP F
Sbjct: 141 QEEGIDYEETFAPVARLEAIRMLLAFACFKDFVLYQMDVKSAFLNGFINEEVYVEQPPSF 200

Query: 343 ENVEFPHHVYKLKKALYGLKQAPRACEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTK 402
           ++  FP+HV++LK ALYGLKQAPRACEFEMSMMGEL+FFLGLQIKQLK G FINQ KY +
Sbjct: 201 QSFNFPNHVFRLKNALYGLKQAPRACEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIR 260

Query: 403 DLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFS 460
           D LKRF     K  +TPMS+S KLD DEKGK ++   YRGMIGSLL LTASRPDIM+S
Sbjct: 261 DPLKRFNMEEAKTMKTPMSSSIKLDMDEKGKPINSTMYRGMIGSLLNLTASRPDIMYS 318

[Close]
BLAST of CmaCh09G011750 vs. NCBI nr
Match: gi|147768968|emb|CAN62460.1| (hypothetical protein VITISV_035911 [Vitis vinifera])

HSP 1 Score: 416.4 bits (1069), Expect = 6.9e-113
Identity = 215/321 (66.98%), Postives = 254/321 (79.13%), Query Frame = 1 

Query: 155 KEEMSLKEEGSSSMPKEWRYALSHPK---DLILGDLEQGVKTRSSI-NLFNNLAFVSQIE 214
           +++   +E G     +E   AL  P+   D I+G+   GV+TRSS+ N+ NNLAF+SQ E
Sbjct: 40  EDKRQQEESGEDPKKEESPLALPPPQQVQDQIIGNPSSGVRTRSSLKNICNNLAFISQTE 99

Query: 215 PKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIR 274
           PK++KDA  DE W++AMQEELN+FER++VWELV RPSN S+IGTKWVFRNKM+EN  I+R
Sbjct: 100 PKNIKDAIVDENWMIAMQEELNKFERSEVWELVPRPSNQSVIGTKWVFRNKMNENDIIVR 159

Query: 275 NKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIM 334
           NKARLVAQGY QEEGIDYE+TFAPVARLEAIRML AFA +K+F+LYQMDVKSAFLNG+I 
Sbjct: 160 NKARLVAQGYNQEEGIDYEKTFAPVARLEAIRMLRAFACFKDFILYQMDVKSAFLNGFIN 219

Query: 335 EEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRA------------CEFEMSMMGELS 394
           EEVYVEQPPGF++  FP+HV+KLKK LYGLKQAP+A             EFEMSMMGEL+
Sbjct: 220 EEVYVEQPPGFQSFNFPNHVFKLKKTLYGLKQAPKAWYERLNFSKCMHSEFEMSMMGELN 279

Query: 395 FFLGLQIKQLKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKA 454
           FFLGLQIKQLK G FINQ KY KDLLKRF     K+ +TPMS+S KLD DE+GKS+D   
Sbjct: 280 FFLGLQIKQLKEGTFINQAKYIKDLLKRFNMEEAKVMKTPMSSSIKLDMDERGKSIDSTM 339

Query: 455 YRGMIGSLLYLTASRPDIMFS 460
           YRGMIGSLLYLTASRPD M+S
Sbjct: 340 YRGMIGSLLYLTASRPDFMYS 360

[Close]
BLAST of CmaCh09G011750 vs. NCBI nr
Match: gi|147836561|emb|CAN70885.1| (hypothetical protein VITISV_018629 [Vitis vinifera])

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 200/301 (66.45%), Postives = 242/301 (80.40%), Query Frame = 1 

Query: 163 EGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDE 222
           E S  +PKE ++ ++HP+D I+G+   GV+TRSS+ N+FNNLAF+SQIEPK++ +  +DE
Sbjct: 37  ESSQDLPKELKFVINHPQDQIIGNPSSGVRTRSSLRNIFNNLAFISQIEPKNINNVLDDE 96

Query: 223 FWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYC 282
            W++AMQEELNQFER++VWEL  RPSN S+IGT+WVFRNK+DENG I+RNKARLVAQG+ 
Sbjct: 97  NWMIAMQEELNQFERSEVWELAPRPSNQSVIGTRWVFRNKIDENGIIVRNKARLVAQGFN 156

Query: 283 QEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGF 342
           QE+GIDYEETFAPV RLEAIRMLLAFA +K+FVLYQM VK+AFLNG+I EEVYVEQPPGF
Sbjct: 157 QEKGIDYEETFAPVVRLEAIRMLLAFACFKDFVLYQMYVKNAFLNGFINEEVYVEQPPGF 216

Query: 343 ENVEFPHHVYKLKKALYGLKQAPRACEFEMSMMGELSFFLGLQIKQLKNGIFINQEKYTK 402
           ++  FP+HV+KLK+ALYGLKQAPRA    +S      F L +   QLK G FINQ KY +
Sbjct: 217 QSFNFPNHVFKLKRALYGLKQAPRAWYERLS-----KFLLKM---QLKEGXFINQAKYIR 276

Query: 403 DLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDIKAYRGMIGSLLYLTASRPDIMFSDI 462
           DLLKRF     K  +TPMS+S KLDKDEK KS+    YRGMIGSLLYLTASRPDIM+S  
Sbjct: 277 DLLKRFNMEEAKTMKTPMSSSIKLDKDEKSKSIYSTMYRGMIGSLLYLTASRPDIMYSVF 329

[Close]
BLAST of CmaCh09G011750 vs. NCBI nr
Match: gi|778708530|ref|XP_011656225.1| (PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis sativus])

HSP 1 Score: 389.4 bits (999), Expect = 9.1e-105
Identity = 200/263 (76.05%), Postives = 227/263 (86.31%), Query Frame = 1 

Query: 136 KRNFGDLLVSDNGKEIVTSKEEMSL---KEEGSSSMPKEWRYALSHPKDLILGDLEQGVK 195
           +++FGDLLV+D GKEIV S +++++   KEEGSSS+PK WRYALSH KDLIL + EQGVK
Sbjct: 363 EKDFGDLLVNDKGKEIVPSMQDVNIIEKKEEGSSSLPKVWRYALSHLKDLILSNPEQGVK 422

Query: 196 TRSSINLFNNLAFVSQIEPKSLKDAENDEFWILAMQEELNQFERNKVWELVHRPSNTSII 255
           TRSS+NLF+NLAFVSQIEP+S KDAE DEFWILAMQEELNQFERNKVW+LV RPSN SII
Sbjct: 423 TRSSLNLFSNLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASII 482

Query: 256 GTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKN 315
           GTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKN
Sbjct: 483 GTKWVFRNKMDENGNIIRNKARLVAQGYCQEEGIDYEETFAPVARLEAIRMLLAFASYKN 542

Query: 316 FVLYQMDVKSAFLNGYIMEEVYVEQPPGFENVEFPHHVYKLKKALYGLKQAPRACEFEMS 375
           F+LYQMDVKS FLNGYI+E+ YVEQP  FE+ + P+HVYKLKKALYGLKQAPRA    +S
Sbjct: 543 FILYQMDVKSDFLNGYIVEKFYVEQPXAFESFDLPNHVYKLKKALYGLKQAPRAWYDRLS 602

Query: 376 -MMGELSFFLGLQIKQLKNGIFI 395
             + E  F +G    ++ N +FI
Sbjct: 603 KFLLENDFKMG----KIDNTLFI 621

[Close]
BLAST of CmaCh09G011750 vs. NCBI nr
Match: gi|147783586|emb|CAN61443.1| (hypothetical protein VITISV_044238 [Vitis vinifera])

HSP 1 Score: 384.8 bits (987), Expect = 2.2e-103
Identity = 197/323 (60.99%), Postives = 239/323 (73.99%), Query Frame = 1 

Query: 163 EGSSSMPKEWRYALSHPKDLILGDLEQGVKTRSSI-NLFNNLAFVSQIEPKSLKDAENDE 222
           E S  +PK+W++ ++HP+D I+G+   GV+TRSS+ N+ NN AF+SQIEPK++ DA  DE
Sbjct: 104 ESSQDLPKDWKFVINHPQDQIIGNSSSGVRTRSSLRNICNNFAFISQIEPKNINDALVDE 163

Query: 223 FWILAMQEELNQFERNKVWELVHRPSNTSIIGTKWVFRNKMDENGNIIRNKARLVAQGYC 282
            W++AMQEELNQFERN+VWELV RPSN S+IGT+WVFRNKMDEN  I+RNK+RLVAQG+ 
Sbjct: 164 NWMIAMQEELNQFERNEVWELVARPSNQSVIGTRWVFRNKMDENXIILRNKSRLVAQGFN 223

Query: 283 QEEGIDYEETFAPVARLEAIRMLLAFASYKNFVLYQMDVKSAFLNGYIMEEVYVEQPPGF 342
           QEEGIDYEETFAPVARLEAIRMLLAFA +K+FVLYQMDVKS FLN +I E VYVE PPGF
Sbjct: 224 QEEGIDYEETFAPVARLEAIRMLLAFACFKDFVLYQMDVKSXFLNDFINEXVYVEXPPGF 283

Query: 343 ENVEFPHHVYKLKKALYGLKQAPRACEFEMS--------MMGELSFFLGLQIKQ------ 402
           ++V FP+HV+KLKK LYGLK+APRA    +S         MG++   L ++ K+      
Sbjct: 284 QSVNFPNHVFKLKKTLYGLKEAPRAXNERLSKFLXKKGFKMGKIDTTLFIKTKENDMLLV 343

Query: 403 -----------LKNGIFINQEKYTKDLLKRFKFNGGKIARTPMSTSTKLDKDEKGKSVDI 460
                         G FINQ KY +DLLKRF     K  + PMS+S KLDKDEK KS+D 
Sbjct: 344 QIYVDDIIFGATNEGTFINQAKYIRDLLKRFNMEEAKTMKNPMSSSIKLDKDEKXKSIDS 403

The following BLAST results are available for this feature:
BLAST of CmaCh09G011750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COPIA_DROME3.0e-3148.99Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
POLX_TOBAC6.6e-3136.29Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
M820_ARATH6.9e-2045.90Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg0... [more]
YE12B_YEAST5.5e-0930.19Transposon Ty1-ER2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
YM14B_YEAST5.5e-0930.19Transposon Ty1-MR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... [more]
BLAST of CmaCh09G011750 vs. TrEMBL
Match NameE-valueIdentityDescription
A5AVS9_VITVI2.9e-11871.81Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021518 PE=4 SV=1[more]
A5AH07_VITVI4.8e-11366.98Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_035911 PE=4 SV=1[more]
A5C4X7_VITVI8.8e-10766.45Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018629 PE=4 SV=1[more]
A5BK23_VITVI1.6e-10360.99Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044238 PE=4 SV=1[more]
A5C8K0_VITVI4.5e-10363.52Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001808 PE=4 SV=1[more]
BLAST of CmaCh09G011750 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23160.14.0e-3441.86 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00820.13.9e-2145.90ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)[more]
ATMG00810.14.4e-0935.51ATMG00810.1 DNA/RNA polymerases superfamily protein[more]
BLAST of CmaCh09G011750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|147778546|emb|CAN62895.1|4.2e-11871.81hypothetical protein VITISV_021518 [Vitis vinifera][more]
gi|147768968|emb|CAN62460.1|6.9e-11366.98hypothetical protein VITISV_035911 [Vitis vinifera][more]
gi|147836561|emb|CAN70885.1|1.3e-10666.45hypothetical protein VITISV_018629 [Vitis vinifera][more]
gi|778708530|ref|XP_011656225.1|9.1e-10576.05PREDICTED: LOW QUALITY PROTEIN: retrovirus-related Pol polyprotein from transpos... [more]
gi|147783586|emb|CAN61443.1|2.2e-10360.99hypothetical protein VITISV_044238 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006310 DNA recombination
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G011750.1CmaCh09G011750.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 368..420
score: 4.9E-12coord: 237..366
score: 7.6
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 28..459
score: 4.9E
NoneNo IPR availablePANTHERPTHR11439:SF192SUBFAMILY NOT NAMEDcoord: 28..459
score: 4.9E
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 236..458
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G011750Melon (DHL92) v3.5.1cmameB029
CmaCh09G011750Watermelon (Charleston Gray)cmawcgB035
CmaCh09G011750Watermelon (Charleston Gray)cmawcgB039
CmaCh09G011750Cucurbita pepo (Zucchini)cmacpeB025
CmaCh09G011750Cucurbita pepo (Zucchini)cmacpeB046
CmaCh09G011750Bottle gourd (USVL1VR-Ls)cmalsiB041
CmaCh09G011750Cucumber (Gy14) v2cgybcmaB702
CmaCh09G011750Cucumber (Gy14) v2cgybcmaB883
CmaCh09G011750Melon (DHL92) v3.6.1cmamedB028
CmaCh09G011750Cucumber (Chinese Long) v3cmacucB0047
CmaCh09G011750Cucurbita maxima (Rimu)cmacmaB050
CmaCh09G011750Cucurbita maxima (Rimu)cmacmaB056
CmaCh09G011750Cucumber (Gy14) v1cgycmaB0902
CmaCh09G011750Cucurbita moschata (Rifu)cmacmoB027
CmaCh09G011750Cucurbita moschata (Rifu)cmacmoB044
CmaCh09G011750Cucurbita moschata (Rifu)cmacmoB056
CmaCh09G011750Wild cucumber (PI 183967)cmacpiB035
CmaCh09G011750Cucumber (Chinese Long) v2cmacuB035