CmaCh09G011700 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G011700
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein, putative
LocationCma_Chr09 : 6959302 .. 6960101 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGAGAAAAACTTTGGAGAAGAAGGATTGTTTTGTAATTTGGGTGATATTCTTTTGTTTGGGAACAACACAAGGCTTAAAATTGGGGAATGTTATAAATACATCTATTTGGATTATAGAGTTGATAGGCTTCAAAAGTTTTTCAGTCCATTCTTTGGTCGGAGGCATTGTTTTGATTCCATGATTGATTTTCTTGAAGAATGTGTTCTTCAATACAAATCTTTCTTGAAAGACAACGAGCTCATCGAAGAATGAAAACAAGTCGGGAATATAACAGATAGGGCTTCTTAGAAAGAAGCAGTATTACAGAAAAAAGAGCTTATGTTTTTTCGACAAGACGAAGGCCTGGAAAAGGTTAGGACTATCCGTTCGATGGGCTCCCCTAAAAAAAAGAAGTCTTTCTTGGAAGACAATGAGGTCATCGGAAACATAACGAATAGGGCTTCTCAGAAACAAGCAGTGCTGCAAAGAAAAGAGCGTGTGTCTTTTCGACAAGAAGGAAGTCAAGAAAAGGTCACGGCTATCCATTCGACGGGCTCCCCTAAAAAGAAGACGTCTTTCATTAAATTTGTAAGGGAGAAGTATAGAACCATATCTAGTTCGCTTAAAGAGTGCATATCAATCTATGCACTCACATGCCCATAAGGATTTTGAAGCATAATTTTGAGAGGATGGGATATCTTATGAGTTTGATGGATTCATTTGAATCGTTGTTGTATTCAAATTGGGTTGTTTCTGAGGAGCTTGAGAGATGTTTTCCAAAAAAGTTTCTAAGTATGAGAAGCTTTCAAAGGTGA

mRNA sequence

ATGCATGAGAAAAACTTTGGAGAAGAAGGATTGTTTTGTAATTTGGGTGATATTCTTTTGTTTGGGAACAACACAAGGCTTAAAATTGGGGAATGTTATAAATACATCTATTTGGATTATAGAGTTGATAGGCTTCAAAAGTTTTTCAGTCCATTCTTTGGTCGGAGGCATTGTTTTGATTCCATGATTGATTTTCTTGAAGAATGTCATAATTTTGAGAGGATGGGATATCTTATGAGTTTGATGGATTCATTTGAATCGTTGTTGTATTCAAATTGGGTTGTTTCTGAGGAGCTTGAGAGATGTTTTCCAAAAAAGTTTCTAAGTATGAGAAGCTTTCAAAGGTGA

Coding sequence (CDS)

ATGCATGAGAAAAACTTTGGAGAAGAAGGATTGTTTTGTAATTTGGGTGATATTCTTTTGTTTGGGAACAACACAAGGCTTAAAATTGGGGAATGTTATAAATACATCTATTTGGATTATAGAGTTGATAGGCTTCAAAAGTTTTTCAGTCCATTCTTTGGTCGGAGGCATTGTTTTGATTCCATGATTGATTTTCTTGAAGAATGTCATAATTTTGAGAGGATGGGATATCTTATGAGTTTGATGGATTCATTTGAATCGTTGTTGTATTCAAATTGGGTTGTTTCTGAGGAGCTTGAGAGATGTTTTCCAAAAAAGTTTCTAAGTATGAGAAGCTTTCAAAGGTGA

Protein sequence

MHEKNFGEEGLFCNLGDILLFGNNTRLKIGECYKYIYLDYRVDRLQKFFSPFFGRRHCFDSMIDFLEECHNFERMGYLMSLMDSFESLLYSNWVVSEELERCFPKKFLSMRSFQR
Homology
[Close]
BLAST of CmaCh09G011700 vs. TrEMBL
Match: A0A0A0K7S2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G276680 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.5e-17
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 1 

Query: 1   MHEKNFGEEGLFCNLGDILLFGNNTRLKIGECYKYIYLDYRVDRLQKFFSPFFGRRHCFD 60
           MHEK +G   LFCNL DILL GN TRLK+ EC KYI+LDYRV+RL K FS F G  HCF 
Sbjct: 291 MHEKEYGSGELFCNLSDILLIGNETRLKLEECDKYIHLDYRVERLGKCFSQFSGWSHCFA 350

Query: 61  SMIDFLE 68
           SM+DFL+
Sbjct: 351 SMVDFLQ 357

[Close]
BLAST of CmaCh09G011700 vs. TrEMBL
Match: A0A0A0K415_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G291110 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.9e-17
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 1 

Query: 1   MHEK-NFGEEGLFCNLGDILLFGNNTRLKIGECYKYIYLDYRVDRLQKFFSPFFGRRHCF 60
           MH+K + G +GLFCNLGDILLFGN  RLK+GE  KYIYLDYR+ RL+K F+   G R CF
Sbjct: 339 MHDKKDNGSKGLFCNLGDILLFGNKERLKVGESDKYIYLDYRIGRLKKCFNQLNGWRFCF 398

Query: 61  DSMIDFLE 68
            SMIDFLE
Sbjct: 399 SSMIDFLE 406

[Close]
BLAST of CmaCh09G011700 vs. TrEMBL
Match: F6HG17_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g01830 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.7e-14
Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 1 

Query: 8   EEGLFCNLGDILLFGNNTRLKIGECYKYIYLDYRVDRLQKFFSPFFGRRHCFDSMIDFLE 67
           E  LFC+LGDIL+FGN  RLK+G     +YLDYRVDRL + F P  G R+CF+SMIDFLE
Sbjct: 327 ENSLFCSLGDILIFGNKDRLKVGADIVEVYLDYRVDRLIECFGPLTGWRYCFNSMIDFLE 386

Query: 68  EC 70
           +C
Sbjct: 387 DC 388

[Close]
BLAST of CmaCh09G011700 vs. TrEMBL
Match: V4U3Y4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007134mg PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.7e-13
Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 1 

Query: 12  FCNLGDILLFGNNTRLKIGECYKYIYLDYRVDRLQKFFSPFFGRRHCFDSMIDFLEEC 70
           FC LGDILLFGN  RLK+   ++ IYLDYRV RL + F+P  G RHCF SMID LE+C
Sbjct: 316 FCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKRLMECFAPLSGWRHCFSSMIDLLEDC 373

[Close]
BLAST of CmaCh09G011700 vs. TrEMBL
Match: A0A067DGU8_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g048652mg PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.7e-13
Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 1 

Query: 12  FCNLGDILLFGNNTRLKIGECYKYIYLDYRVDRLQKFFSPFFGRRHCFDSMIDFLEEC 70
           FC LGDILLFGN  RLK+   ++ IYLDYRV RL + F+P  G RHCF SMID LE+C
Sbjct: 337 FCPLGDILLFGNKDRLKVNPGFEEIYLDYRVKRLMECFAPLSGWRHCFSSMIDLLEDC 394

[Close]
BLAST of CmaCh09G011700 vs. TAIR10
Match: AT1G65780.1 (AT1G65780.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 48.9 bits (115), Expect = 2.4e-06
Identity = 25/56 (44.64%), Postives = 36/56 (64.29%), Query Frame = 1 

Query: 15  LGDILLFGNNTRLKIGECYKY--IYLDYRVDRLQKFFSPFFGRRHCFDSMIDFLEE 69
           LGD++LFGN+ R+KI +      I++D RVD+L   F PF+G +   D MI  LE+
Sbjct: 322 LGDVVLFGNDERMKIKDRKDLVNIFIDERVDKLYPCFMPFYGWKATIDGMIRLLED 377

[Close]
BLAST of CmaCh09G011700 vs. NCBI nr
Match: gi|659120596|ref|XP_008460266.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499144 [Cucumis melo])

HSP 1 Score: 102.8 bits (255), Expect = 4.0e-19
Identity = 63/149 (42.28%), Postives = 78/149 (52.35%), Query Frame = 1 

Query: 1   MHEKNFGEEGLFCNLGDILLFGNNTRLKIGECYKYIYLDYRVDRLQKFFSPFFGRRHCFD 60
           MHEK  G + +FC LGDILLFGN ++LK+    KYI+LDYRV+RLQ+ F+PF G RHCF 
Sbjct: 336 MHEKKCGSDVIFCCLGDILLFGNKSKLKVXFADKYIFLDYRVERLQECFNPFTGWRHCFA 395

Query: 61  SMIDFLEEC------HNFERMGYL-----------MSLMDS------------------- 104
           SM DFLE+C       + + M +L            SL D                    
Sbjct: 396 SMTDFLEDCILQFQDVDNDDMSFLKFVQTRFKVIASSLRDCISIFCTHVSRSVLKYNFEN 455

[Close]
BLAST of CmaCh09G011700 vs. NCBI nr
Match: gi|778730286|ref|XP_011659750.1| (PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-17
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 1 

Query: 1   MHEKNFGEEGLFCNLGDILLFGNNTRLKIGECYKYIYLDYRVDRLQKFFSPFFGRRHCFD 60
           MHEK +G   LFCNL DILL GN TRLK+ EC KYI+LDYRV+RL K FS F G  HCF 
Sbjct: 291 MHEKEYGSGELFCNLSDILLIGNETRLKLEECDKYIHLDYRVERLGKCFSQFSGWSHCFA 350

Query: 61  SMIDFLE 68
           SM+DFL+
Sbjct: 351 SMVDFLQ 357

[Close]
BLAST of CmaCh09G011700 vs. NCBI nr
Match: gi|700189149|gb|KGN44382.1| (hypothetical protein Csa_7G276680 [Cucumis sativus])

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-17
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 1 

Query: 1   MHEKNFGEEGLFCNLGDILLFGNNTRLKIGECYKYIYLDYRVDRLQKFFSPFFGRRHCFD 60
           MHEK +G   LFCNL DILL GN TRLK+ EC KYI+LDYRV+RL K FS F G  HCF 
Sbjct: 291 MHEKEYGSGELFCNLSDILLIGNETRLKLEECDKYIHLDYRVERLGKCFSQFSGWSHCFA 350

Query: 61  SMIDFLE 68
           SM+DFL+
Sbjct: 351 SMVDFLQ 357

[Close]
BLAST of CmaCh09G011700 vs. NCBI nr
Match: gi|449443986|ref|XP_004139756.1| (PREDICTED: uncharacterized protein LOC101214715 [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-16
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 1 

Query: 1   MHEK-NFGEEGLFCNLGDILLFGNNTRLKIGECYKYIYLDYRVDRLQKFFSPFFGRRHCF 60
           MH+K + G +GLFCNLGDILLFGN  RLK+GE  KYIYLDYR+ RL+K F+   G R CF
Sbjct: 149 MHDKKDNGSKGLFCNLGDILLFGNKERLKVGESDKYIYLDYRIGRLKKCFNQLNGWRFCF 208

Query: 61  DSMIDFLE 68
            SMIDFLE
Sbjct: 209 SSMIDFLE 216

[Close]
BLAST of CmaCh09G011700 vs. NCBI nr
Match: gi|700189207|gb|KGN44440.1| (hypothetical protein Csa_7G291110 [Cucumis sativus])

HSP 1 Score: 94.4 bits (233), Expect = 1.4e-16
Identity = 46/68 (67.65%), Postives = 53/68 (77.94%), Query Frame = 1 

Query: 1   MHEK-NFGEEGLFCNLGDILLFGNNTRLKIGECYKYIYLDYRVDRLQKFFSPFFGRRHCF 60
           MH+K + G +GLFCNLGDILLFGN  RLK+GE  KYIYLDYR+ RL+K F+   G R CF
Sbjct: 339 MHDKKDNGSKGLFCNLGDILLFGNKERLKVGESDKYIYLDYRIGRLKKCFNQLNGWRFCF 398

Query: 61  DSMIDFLE 68
            SMIDFLE
Sbjct: 399 SSMIDFLE 406

The following BLAST results are available for this feature:
BLAST of CmaCh09G011700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh09G011700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7S2_CUCSA1.5e-1767.16Uncharacterized protein OS=Cucumis sativus GN=Csa_7G276680 PE=4 SV=1[more]
A0A0A0K415_CUCSA9.9e-1767.65Uncharacterized protein OS=Cucumis sativus GN=Csa_7G291110 PE=4 SV=1[more]
F6HG17_VITVI2.7e-1462.90Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g01830 PE=4 SV=... [more]
V4U3Y4_9ROSI8.7e-1363.79Uncharacterized protein OS=Citrus clementina GN=CICLE_v10007134mg PE=4 SV=1[more]
A0A067DGU8_CITSI8.7e-1363.79Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g048652mg PE=4 S... [more]
BLAST of CmaCh09G011700 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G65780.12.4e-0644.64 P-loop containing nucleoside triphosphate hydrolases superfamily pro... [more]
BLAST of CmaCh09G011700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659120596|ref|XP_008460266.1|4.0e-1942.28PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499144 [Cucumis me... [more]
gi|778730286|ref|XP_011659750.1|2.2e-1767.16PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis sativus][more]
gi|700189149|gb|KGN44382.1|2.2e-1767.16hypothetical protein Csa_7G276680 [Cucumis sativus][more]
gi|449443986|ref|XP_004139756.1|1.4e-1667.65PREDICTED: uncharacterized protein LOC101214715 [Cucumis sativus][more]
gi|700189207|gb|KGN44440.1|1.4e-1667.65hypothetical protein Csa_7G291110 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G011700.1CmaCh09G011700.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G011700Watermelon (97103) v2cmawmbB049
CmaCh09G011700Cucurbita maxima (Rimu)cmacmaB050
CmaCh09G011700Cucurbita maxima (Rimu)cmacmaB056
CmaCh09G011700Cucurbita moschata (Rifu)cmacmoB027
CmaCh09G011700Cucurbita moschata (Rifu)cmacmoB044
CmaCh09G011700Watermelon (Charleston Gray)cmawcgB008
CmaCh09G011700Watermelon (97103) v1cmawmB010
CmaCh09G011700Cucurbita pepo (Zucchini)cmacpeB025
CmaCh09G011700Cucurbita pepo (Zucchini)cmacpeB046
CmaCh09G011700Cucurbita pepo (Zucchini)cmacpeB063
CmaCh09G011700Cucumber (Gy14) v2cgybcmaB883