CmaCh09G011630 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G011630
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionInteractor of constitutive active ROPs 2, chloroplastic-like protein
LocationCma_Chr09 : 6804689 .. 6805916 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATCAATTTAGGAGTGAGGAATTACAGGTGTGGAAAACCTGGCCATTTTAAACGAGATTGTCAGGTGAAAGTAGTGAGTGATCATTGCAGAAAGCCAGGCCATATTAAGCCAAATTACCAAGTCAAAATGCAGGAATTAGAAGCAAATGTTGTACATGAAAGTAAAAATTCTTCCGATCCAATTTGGGAATATTGCTTAACCATTGAGGTTCTTGACCAGCCAACAAACGTGACTTCAGCTGTACATCAAGATGATGTCTCTACAGATGCTCATGCCTTTATAGACTACAATGAAGAATGGATTCTCGATTCTGGTTGTTCTCATCATGCAAGTGGAAACAAAACTCTTCTATCAGATGTTTGTCCACATTGTCAAAAGAAGAGTAAAGGGCCCAACAAAGTGGCTAAATTGGAATCACGACTTTCTCAACTCTAGGAGGAACGGAAGAAAACAAGTGATCAACTAAGTGCATCTGAATCACACAAAAAGCAAGCCCAACAGAAAGTAGAAGAAGCAAAGAAACAACTATCAGATATGTCTGAAAAGCTTGAAGAATCCCAACAGCAGGTGTTTGAGCTCTCTGCTTCTAAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATTGCAATCGAGCATGGAAGTCAAAACTCGAATTCCCATTCATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTGTCTAAATCCAACCAAACCCGAAGTAACCTCACTAAGTCTATGGAAAAGCTTCAATCAGATGGAATCAAAACTTTTGAAGCCTACAACTCTTTGTCACCAAAATTGGAGGAATCAAAAGATCGGAATTCAGGGAGGGATGACTTTGATTTTTATGGAGGGAAGGAAGATGCCAGAAAGATTTAAATTCCAGTCGTGTTGGTGGTGGATTTAGGAATTATGGCTCGAATGATTCGTATGAGAGGAGTAACAGGTATTTGAACGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTATAGCAGCGGCGGTGGTGGCAGTCGACCGAAGCTTAATCTGGAGCCACGTACGCTGCCGGTGAATGATGTGAAGTTGTCGAAGATATCAAGGACGACCGCGAGGTTCAAGAATTCAAACCCATTTGGAATGGTGAGGCCAAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGA

mRNA sequence

ATGAGAATCAATTTAGGAGTGAGGAATTACAGGTGTGGAAAACCTGGCCATTTTAAACGAGATTGTCAGGTGAAAGTAGTGAGTGATCATTGCAGAAAGCCAGGCCATATTAAGCCAAATTACCAAGTCAAAATGCAGGAATTAGAAGCAAATGTTGTACATGAAAGTAAAAATTCTTCCGATCCAATTTGGGAATATTGCTTAACCATTGAGGTTCTTGACCAGCCAACAAACGTGACTTCAGCTGTACATCAAGATGATGTCTCTACAGATGCTCATGCCTTTATAGACTACAATGAAGAATGGATTCTCGATTCTGGTTGTTCTCATCATGCAAGTGGAAACAAAACTCTTCTATCAGATGAGGAACGGAAGAAAACAAGTGATCAACTAAGTGCATCTGAATCACACAAAAAGCAAGCCCAACAGAAAGTAGAAGAAGCAAAGAAACAACTATCAGATATGTCTGAAAAGCTTGAAGAATCCCAACAGCAGGTGTTTGAGCTCTCTGCTTCTAAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATTGCAATCGAGCATGGAAGTCAAAACTCGAATTCCCATTCATGAAGTTCAGAGGCTCAAGGAATTATGGCTCGAATGATTCGTATGAGAGGAGTAACAGGTATTTGAACGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTATAGCAGCGGCGGTGGTGGCAGTCGACCGAAGCTTAATCTGGAGCCACGTACGCTGCCGGTGAATGATGTGAAGTTGTCGAAGATATCAAGGACGACCGCGAGGTTCAAGAATTCAAACCCATTTGGAATGGTGAGGCCAAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGA

Coding sequence (CDS)

ATGAGAATCAATTTAGGAGTGAGGAATTACAGGTGTGGAAAACCTGGCCATTTTAAACGAGATTGTCAGGTGAAAGTAGTGAGTGATCATTGCAGAAAGCCAGGCCATATTAAGCCAAATTACCAAGTCAAAATGCAGGAATTAGAAGCAAATGTTGTACATGAAAGTAAAAATTCTTCCGATCCAATTTGGGAATATTGCTTAACCATTGAGGTTCTTGACCAGCCAACAAACGTGACTTCAGCTGTACATCAAGATGATGTCTCTACAGATGCTCATGCCTTTATAGACTACAATGAAGAATGGATTCTCGATTCTGGTTGTTCTCATCATGCAAGTGGAAACAAAACTCTTCTATCAGATGAGGAACGGAAGAAAACAAGTGATCAACTAAGTGCATCTGAATCACACAAAAAGCAAGCCCAACAGAAAGTAGAAGAAGCAAAGAAACAACTATCAGATATGTCTGAAAAGCTTGAAGAATCCCAACAGCAGGTGTTTGAGCTCTCTGCTTCTAAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATTGCAATCGAGCATGGAAGTCAAAACTCGAATTCCCATTCATGAAGTTCAGAGGCTCAAGGAATTATGGCTCGAATGATTCGTATGAGAGGAGTAACAGGTATTTGAACGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTATAGCAGCGGCGGTGGTGGCAGTCGACCGAAGCTTAATCTGGAGCCACGTACGCTGCCGGTGAATGATGTGAAGTTGTCGAAGATATCAAGGACGACCGCGAGGTTCAAGAATTCAAACCCATTTGGAATGGTGAGGCCAAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGA

Protein sequence

MRINLGVRNYRCGKPGHFKRDCQVKVVSDHCRKPGHIKPNYQVKMQELEANVVHESKNSSDPIWEYCLTIEVLDQPTNVTSAVHQDDVSTDAHAFIDYNEEWILDSGCSHHASGNKTLLSDEERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELHKLSQDCNRAWKSKLEFPFMKFRGSRNYGSNDSYERSNRYLNGDDSSNSKWGLSRVFDENRRKKDEGNYSSGGGGSRPKLNLEPRTLPVNDVKLSKISRTTARFKNSNPFGMVRPREEVLAEKGHD
Homology
[Close]
BLAST of CmaCh09G011630 vs. Swiss-Prot
Match: IF4B3_ARATH (Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana GN=EIF4B3 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 7.7e-09
Identity = 46/121 (38.02%), Postives = 62/121 (51.24%), Query Frame = 1 

Query: 205 SRNYGSNDSYE-----------RSNRYLNGDDSSNSKWGLSRVFDENRRKKDEGNYSSGG 264
           S N G  D +E           R ++Y  G  S +  WG         R+++E   ++G 
Sbjct: 220 SSNGGGGDRFEKRGSFESLSRNRDSQYGGGGGSESDTWG---------RRREESGAANGS 279

Query: 265 ----GGSRPKLNLEPRTLPVNDVKLSK----ISRTTARFKNSNPFGMVRPREEVLAEKGH 307
               GGSRP+L L+PRTLPV  V++ K    +     + K +NPFG  RPREEVLAEKG 
Sbjct: 280 PPPSGGSRPRLVLQPRTLPVAVVEVVKPESPVLVIVEKPKGANPFGNARPREEVLAEKGQ 331

[Close]
BLAST of CmaCh09G011630 vs. Swiss-Prot
Match: ICR2_ARATH (Interactor of constitutive active ROPs 2, chloroplastic OS=Arabidopsis thaliana GN=ICR2 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.1e-06
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELH 181
           EE KK  +QLSASE+ KK+AQ + EE K              QQ+ E++AS++ R+ EL 
Sbjct: 88  EELKKAKEQLSASEALKKEAQDQAEETK--------------QQLMEINASEDSRIDELR 147

Query: 182 KLSQDCNRAWKSKLE 197
           KLSQ+ ++AW+S+LE
Sbjct: 148 KLSQERDKAWQSELE 148

[Close]
BLAST of CmaCh09G011630 vs. TrEMBL
Match: A0A0A0LDX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736850 PE=4 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.8e-20
Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELH 181
           EE KKTSD+LSASESHKKQAQQ+ EEAKKQLSDMS KLE+SQQQV ELSAS+EDRVQELH
Sbjct: 88  EELKKTSDRLSASESHKKQAQQEAEEAKKQLSDMSAKLEQSQQQVLELSASEEDRVQELH 147

Query: 182 KLSQDCNRAWKSKLE 197
           K+SQD +RAW+S+LE
Sbjct: 148 KISQDRDRAWQSELE 162

[Close]
BLAST of CmaCh09G011630 vs. TrEMBL
Match: A0A0D2SP95_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14
Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELH 181
           ++ KKT DQL+ASES K++A Q+ EEAKKQLS MS KLEES+QQ+ E+SAS++DRVQEL 
Sbjct: 89  DDLKKTKDQLTASESWKRRAMQEAEEAKKQLSAMSAKLEESEQQLMEISASEDDRVQELR 148

Query: 182 KLSQDCNRAWKSKLE 197
           KLSQD +RAW+S+LE
Sbjct: 149 KLSQDRDRAWQSELE 163

[Close]
BLAST of CmaCh09G011630 vs. TrEMBL
Match: A0A0D2RUD2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14
Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELH 181
           ++ KKT DQL+ASES K++A Q+ EEAKKQLS MS KLEES+QQ+ E+SAS++DRVQEL 
Sbjct: 86  DDLKKTKDQLTASESWKRRAMQEAEEAKKQLSAMSAKLEESEQQLMEISASEDDRVQELR 145

Query: 182 KLSQDCNRAWKSKLE 197
           KLSQD +RAW+S+LE
Sbjct: 146 KLSQDRDRAWQSELE 160

[Close]
BLAST of CmaCh09G011630 vs. TrEMBL
Match: A0A0D2RMH0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14
Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELH 181
           ++ KKT DQL+ASES K++A Q+ EEAKKQLS MS KLEES+QQ+ E+SAS++DRVQEL 
Sbjct: 87  DDLKKTKDQLTASESWKRRAMQEAEEAKKQLSAMSAKLEESEQQLMEISASEDDRVQELR 146

Query: 182 KLSQDCNRAWKSKLE 197
           KLSQD +RAW+S+LE
Sbjct: 147 KLSQDRDRAWQSELE 161

[Close]
BLAST of CmaCh09G011630 vs. TrEMBL
Match: A0A0D2RMG6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.5e-14
Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELH 181
           ++ KKT DQL+ASES K++A Q+ EEAKKQLS MS KLEES+QQ+ E+SAS++DRVQEL 
Sbjct: 87  DDLKKTKDQLTASESWKRRAMQEAEEAKKQLSAMSAKLEESEQQLMEISASEDDRVQELR 146

Query: 182 KLSQDCNRAWKSKLE 197
           KLSQD +RAW+S+LE
Sbjct: 147 KLSQDRDRAWQSELE 161

[Close]
BLAST of CmaCh09G011630 vs. TAIR10
Match: AT4G38710.2 (AT4G38710.2 glycine-rich protein)

HSP 1 Score: 62.8 bits (151), Expect = 4.3e-10
Identity = 46/121 (38.02%), Postives = 62/121 (51.24%), Query Frame = 1 

Query: 205 SRNYGSNDSYE-----------RSNRYLNGDDSSNSKWGLSRVFDENRRKKDEGNYSSGG 264
           S N G  D +E           R ++Y  G  S +  WG         R+++E   ++G 
Sbjct: 220 SSNGGGGDRFEKRGSFESLSRNRDSQYGGGGGSESDTWG---------RRREESGAANGS 279

Query: 265 ----GGSRPKLNLEPRTLPVNDVKLSK----ISRTTARFKNSNPFGMVRPREEVLAEKGH 307
               GGSRP+L L+PRTLPV  V++ K    +     + K +NPFG  RPREEVLAEKG 
Sbjct: 280 PPPSGGSRPRLVLQPRTLPVAVVEVVKPESPVLVIVEKPKGANPFGNARPREEVLAEKGQ 331

[Close]
BLAST of CmaCh09G011630 vs. TAIR10
Match: AT2G37080.1 (AT2G37080.1 ROP interactive partner 3)

HSP 1 Score: 53.1 bits (126), Expect = 3.4e-07
Identity = 34/75 (45.33%), Postives = 49/75 (65.33%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELH 181
           EE KK  +QLSASE+ KK+AQ + EE K              QQ+ E++AS++ R+ EL 
Sbjct: 88  EELKKAKEQLSASEALKKEAQDQAEETK--------------QQLMEINASEDSRIDELR 147

Query: 182 KLSQDCNRAWKSKLE 197
           KLSQ+ ++AW+S+LE
Sbjct: 148 KLSQERDKAWQSELE 148

[Close]
BLAST of CmaCh09G011630 vs. TAIR10
Match: AT5G60210.1 (AT5G60210.1 ROP interactive partner 5)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06
Identity = 36/71 (50.70%), Postives = 49/71 (69.01%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKE--DRVQE 181
           EE KK  DQ+S SE+ KKQA+Q+ EE++KQL ++S KLEESQ Q  E SA +E  D+   
Sbjct: 84  EELKKAKDQISVSETSKKQAEQEAEESRKQLQEVSSKLEESQNQFVETSALEEETDKTGS 143

Query: 182 L--HKLSQDCN 189
           L    +SQ+C+
Sbjct: 144 LVFQSVSQECD 154

[Close]
BLAST of CmaCh09G011630 vs. NCBI nr
Match: gi|449440061|ref|XP_004137803.1| (PREDICTED: interactor of constitutive active ROPs 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 2.5e-20
Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELH 181
           EE KKTSD+LSASESHKKQAQQ+ EEAKKQLSDMS KLE+SQQQV ELSAS+EDRVQELH
Sbjct: 88  EELKKTSDRLSASESHKKQAQQEAEEAKKQLSDMSAKLEQSQQQVLELSASEEDRVQELH 147

Query: 182 KLSQDCNRAWKSKLE 197
           K+SQD +RAW+S+LE
Sbjct: 148 KISQDRDRAWQSELE 162

[Close]
BLAST of CmaCh09G011630 vs. NCBI nr
Match: gi|700203804|gb|KGN58937.1| (hypothetical protein Csa_3G736850 [Cucumis sativus])

HSP 1 Score: 108.2 bits (269), Expect = 2.5e-20
Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELH 181
           EE KKTSD+LSASESHKKQAQQ+ EEAKKQLSDMS KLE+SQQQV ELSAS+EDRVQELH
Sbjct: 88  EELKKTSDRLSASESHKKQAQQEAEEAKKQLSDMSAKLEQSQQQVLELSASEEDRVQELH 147

Query: 182 KLSQDCNRAWKSKLE 197
           K+SQD +RAW+S+LE
Sbjct: 148 KISQDRDRAWQSELE 162

[Close]
BLAST of CmaCh09G011630 vs. NCBI nr
Match: gi|659083992|ref|XP_008442649.1| (PREDICTED: LOW QUALITY PROTEIN: interactor of constitutive active ROPs 3-like [Cucumis melo])

HSP 1 Score: 104.4 bits (259), Expect = 3.7e-19
Identity = 59/75 (78.67%), Postives = 69/75 (92.00%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELH 181
           EE KKTSD+LS SESHK+QAQQ+ EEAKKQLSDMS KLE+SQQQV ELSAS+EDRVQELH
Sbjct: 88  EELKKTSDRLSTSESHKRQAQQEAEEAKKQLSDMSAKLEQSQQQVLELSASEEDRVQELH 147

Query: 182 KLSQDCNRAWKSKLE 197
           ++SQD +RAW+S+LE
Sbjct: 148 RISQDRDRAWQSELE 162

[Close]
BLAST of CmaCh09G011630 vs. NCBI nr
Match: gi|823175163|ref|XP_012486019.1| (PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X1 [Gossypium raimondii])

HSP 1 Score: 87.8 bits (216), Expect = 3.5e-14
Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELH 181
           ++ KKT DQL+ASES K++A Q+ EEAKKQLS MS KLEES+QQ+ E+SAS++DRVQEL 
Sbjct: 87  DDLKKTKDQLTASESWKRRAMQEAEEAKKQLSAMSAKLEESEQQLMEISASEDDRVQELR 146

Query: 182 KLSQDCNRAWKSKLE 197
           KLSQD +RAW+S+LE
Sbjct: 147 KLSQDRDRAWQSELE 161

[Close]
BLAST of CmaCh09G011630 vs. NCBI nr
Match: gi|728848489|gb|KHG27932.1| (Interactor of constitutive active ROPs 2, chloroplastic -like protein [Gossypium arboreum])

HSP 1 Score: 87.8 bits (216), Expect = 3.5e-14
Identity = 51/75 (68.00%), Postives = 65/75 (86.67%), Query Frame = 1 

Query: 122 EERKKTSDQLSASESHKKQAQQKVEEAKKQLSDMSEKLEESQQQVFELSASKEDRVQELH 181
           ++ KKT DQL+ASES K++A Q+ EEAKKQLS MS KLEES+QQ+ E+SAS++DRVQEL 
Sbjct: 87  DDLKKTKDQLTASESWKRRAMQEAEEAKKQLSAMSAKLEESEQQLMEISASEDDRVQELR 146

Query: 182 KLSQDCNRAWKSKLE 197
           KLSQD +RAW+S+LE
Sbjct: 147 KLSQDRDRAWQSELE 161

The following BLAST results are available for this feature:
BLAST of CmaCh09G011630 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IF4B3_ARATH7.7e-0938.02Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana GN=EIF4B3 P... [more]
ICR2_ARATH6.1e-0645.33Interactor of constitutive active ROPs 2, chloroplastic OS=Arabidopsis thaliana ... [more]
BLAST of CmaCh09G011630 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDX4_CUCSA1.8e-2082.67Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736850 PE=4 SV=1[more]
A0A0D2SP95_GOSRA2.5e-1468.00Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1[more]
A0A0D2RUD2_GOSRA2.5e-1468.00Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1[more]
A0A0D2RMH0_GOSRA2.5e-1468.00Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1[more]
A0A0D2RMG6_GOSRA2.5e-1468.00Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1[more]
BLAST of CmaCh09G011630 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G38710.24.3e-1038.02 glycine-rich protein[more]
AT2G37080.13.4e-0745.33 ROP interactive partner 3[more]
AT5G60210.11.3e-0650.70 ROP interactive partner 5[more]
BLAST of CmaCh09G011630 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449440061|ref|XP_004137803.1|2.5e-2082.67PREDICTED: interactor of constitutive active ROPs 3 isoform X1 [Cucumis sativus][more]
gi|700203804|gb|KGN58937.1|2.5e-2082.67hypothetical protein Csa_3G736850 [Cucumis sativus][more]
gi|659083992|ref|XP_008442649.1|3.7e-1978.67PREDICTED: LOW QUALITY PROTEIN: interactor of constitutive active ROPs 3-like [C... [more]
gi|823175163|ref|XP_012486019.1|3.5e-1468.00PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X1 [G... [more]
gi|728848489|gb|KHG27932.1|3.5e-1468.00Interactor of constitutive active ROPs 2, chloroplastic -like protein [Gossypium... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR010433EIF-4B_pln
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0003743translation initiation factor activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006446 regulation of translational initiation
cellular_component GO:0005840 ribosome
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G011630.1CmaCh09G011630.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 10..38
score: 1.
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 10..23
score: 2.
IPR001878Zinc finger, CCHC-typePROFILEPS50158ZF_CCHCcoord: 10..22
score: 9
IPR001878Zinc finger, CCHC-typeunknownSSF57756Retrovirus zinc finger-like domainscoord: 10..39
score: 2.6
IPR010433Plant specific eukaryotic initiation factor 4BPFAMPF06273eIF-4Bcoord: 237..306
score: 1.
NoneNo IPR availableunknownCoilCoilcoord: 131..165
scor
NoneNo IPR availablePANTHERPTHR34224:SF4SUBFAMILY NOT NAMEDcoord: 122..196
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G011630Cucurbita maxima (Rimu)cmacmaB050
CmaCh09G011630Cucurbita maxima (Rimu)cmacmaB056
CmaCh09G011630Cucumber (Gy14) v1cgycmaB0134
CmaCh09G011630Cucurbita moschata (Rifu)cmacmoB027
CmaCh09G011630Cucurbita moschata (Rifu)cmacmoB044
CmaCh09G011630Wild cucumber (PI 183967)cmacpiB039
CmaCh09G011630Cucumber (Chinese Long) v2cmacuB039
CmaCh09G011630Melon (DHL92) v3.5.1cmameB016
CmaCh09G011630Watermelon (Charleston Gray)cmawcgB008
CmaCh09G011630Watermelon (Charleston Gray)cmawcgB011
CmaCh09G011630Watermelon (97103) v1cmawmB010
CmaCh09G011630Watermelon (97103) v1cmawmB013
CmaCh09G011630Cucurbita pepo (Zucchini)cmacpeB046
CmaCh09G011630Cucurbita pepo (Zucchini)cmacpeB063
CmaCh09G011630Bottle gourd (USVL1VR-Ls)cmalsiB017
CmaCh09G011630Cucumber (Gy14) v2cgybcmaB883
CmaCh09G011630Melon (DHL92) v3.6.1cmamedB016
CmaCh09G011630Cucumber (Chinese Long) v3cmacucB0048
CmaCh09G011630Watermelon (97103) v2cmawmbB049
CmaCh09G011630Watermelon (97103) v2cmawmbB052
CmaCh09G011630Wax gourdcmawgoB0039