CmaCh09G011600 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G011600
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionInteractor of constitutive active ROPs 2, chloroplastic-like protein
LocationCma_Chr09 : 6763223 .. 6763953 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGCAAAGCTTGAAGAATCCCAACAGCAGGCGTTTGAGCTCTCCTCTTCTGAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATCGTAATCGAGCATGGAAGTCCAAACTCGAAGATGTTCAAAAGCAGCATGCAATGGATGCTGCTGCATTGGCCTCTGCTATAAATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTATCTAAATCCAACCAAACTCGAAGTAACCTCGCAAAGTCTAGGGAAAAGCTTCAATCAGATGGAATCAAAGTTGTTGAAGCCTACAACTCTTTGTCACCAGAATTGGAGGAATCAAAGATGGAAATTCAGGGAGGGATGGCCTTGATTTTTATGGAGGGAAGGGAAGATGCCAGAAAAGATTAAATTTCGGTCGTGTTGGTGGTGGATTTAGGAATTATGGCTCGAATGGTTCGTATGAGAGGAGTAACAGGTATTCGAATGGGGATGATTCATCTAACTCAAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTCTGGCAGCGGCGGTGGTGGCAGTCGACCGAAGCTTAGTCTGCAGCCACGTACGCTGCCGGTGAATGATGTGAAGTCGTCGAAGATATCAGGGACGACGACGAGGTCCAAGAGTTCGAACCCATTTGGAATGGTGAGGCCAAGGGAAGAGGTTCTAGCTGAGAAAAGACATGATTAG

mRNA sequence

ATGTCTGCAAAGCTTGAAGAATCCCAACAGCAGGCGTTTGAGCTCTCCTCTTCTGAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATCGTAATCGAGCATGGAAGTCCAAACTCGAAGATGTTCAAAAGCAGCATGCAATGGATGCTGCTGCATTGGCCTCTGCTATAAATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTATCTAAATCCAACCAAACTCGAAGTAACCTCGCAAAAATTGGAGGAATCAAAGATGGAAATTCAGGGAGGGATGGCCTTGATTTTTATGGAGGGAAGGGAAGATGCCAGAAAAGATTAAATTTCGGTCGTGTTGGTGGTGGATTTAGGAATTATGGCTCGAATGGTTCGTATGAGAGGAGTAACAGGTATTCGAATGGGGATGATTCATCTAACTCAAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTCTGGCAGCGGCGGTGGTGGCAGTCGACCGAAGCTTAGTCTGCAGCCACGTACGCTGCCGGTGAATGATGTGAAGTCGTCGAAGATATCAGGGACGACGACGAGGTCCAAGAGTTCGAACCCATTTGGAATGGTGAGGCCAAGGGAAGAGGTTCTAGCTGAGAAAAGACATGATTAG

Coding sequence (CDS)

ATGTCTGCAAAGCTTGAAGAATCCCAACAGCAGGCGTTTGAGCTCTCCTCTTCTGAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATCGTAATCGAGCATGGAAGTCCAAACTCGAAGATGTTCAAAAGCAGCATGCAATGGATGCTGCTGCATTGGCCTCTGCTATAAATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTATCTAAATCCAACCAAACTCGAAGTAACCTCGCAAAAATTGGAGGAATCAAAGATGGAAATTCAGGGAGGGATGGCCTTGATTTTTATGGAGGGAAGGGAAGATGCCAGAAAAGATTAAATTTCGGTCGTGTTGGTGGTGGATTTAGGAATTATGGCTCGAATGGTTCGTATGAGAGGAGTAACAGGTATTCGAATGGGGATGATTCATCTAACTCAAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTCTGGCAGCGGCGGTGGTGGCAGTCGACCGAAGCTTAGTCTGCAGCCACGTACGCTGCCGGTGAATGATGTGAAGTCGTCGAAGATATCAGGGACGACGACGAGGTCCAAGAGTTCGAACCCATTTGGAATGGTGAGGCCAAGGGAAGAGGTTCTAGCTGAGAAAAGACATGATTAG

Protein sequence

MSAKLEESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAINEVQRLKVQLNMVSKSNQTRSNLAKIGGIKDGNSGRDGLDFYGGKGRCQKRLNFGRVGGGFRNYGSNGSYERSNRYSNGDDSSNSKWGLSRVFDENRRKKDEGNSGSGGGGSRPKLSLQPRTLPVNDVKSSKISGTTTRSKSSNPFGMVRPREEVLAEKRHD
Homology
[Close]
BLAST of CmaCh09G011600 vs. Swiss-Prot
Match: ICR2_ARATH (Interactor of constitutive active ROPs 2, chloroplastic OS=Arabidopsis thaliana GN=ICR2 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-13
Identity = 44/89 (49.44%), Postives = 67/89 (75.28%), Query Frame = 1 

Query: 6   EESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAINEVQRL 65
           EE++QQ  E+++SE+ R+ EL KLSQ+R++AW+S+LE +Q+QHAMD+AAL+S +NEVQ+L
Sbjct: 112 EETKQQLMEINASEDSRIDELRKLSQERDKAWQSELEAMQRQHAMDSAALSSTMNEVQKL 171

Query: 66  KVQL-------NMVSKSNQTRSNLAKIGG 88
           K QL       N+  + N+T S + K+ G
Sbjct: 172 KAQLSESENVENLRMELNETLSLVEKLRG 200

[Close]
BLAST of CmaCh09G011600 vs. Swiss-Prot
Match: ICR5_ARATH (Interactor of constitutive active ROPs 5 OS=Arabidopsis thaliana GN=ICR5 PE=1 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10
Identity = 33/64 (51.56%), Postives = 54/64 (84.38%), Query Frame = 1 

Query: 6   EESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAINEVQRL 65
           E+++ Q  ++++SE+ R++EL KLSQ+R++ W+S+LE +Q+QH MD+ AL+SAINEVQ+L
Sbjct: 109 EDAKHQLMDINASEDSRIEELRKLSQERDKTWQSELEAMQRQHGMDSTALSSAINEVQKL 168

Query: 66  KVQL 70
           K +L
Sbjct: 169 KSKL 172

[Close]
BLAST of CmaCh09G011600 vs. Swiss-Prot
Match: IF4B3_ARATH (Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana GN=EIF4B3 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.5e-09
Identity = 47/118 (39.83%), Postives = 62/118 (52.54%), Query Frame = 1 

Query: 117 GGGFRNYGSNGSYE-----RSNRYSNGDDSSNSKWGLSRVFDENRRKKDEGNSGSGG--- 176
           GGG   +   GS+E     R ++Y  G  S +  WG         R+++E  + +G    
Sbjct: 223 GGGGDRFEKRGSFESLSRNRDSQYGGGGGSESDTWG---------RRREESGAANGSPPP 282

Query: 177 -GGSRPKLSLQPRTLPVNDVK----SSKISGTTTRSKSSNPFGMVRPREEVLAEKRHD 222
            GGSRP+L LQPRTLPV  V+     S +     + K +NPFG  RPREEVLAEK  D
Sbjct: 283 SGGSRPRLVLQPRTLPVAVVEVVKPESPVLVIVEKPKGANPFGNARPREEVLAEKGQD 331

[Close]
BLAST of CmaCh09G011600 vs. TrEMBL
Match: A0A0A0LDX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736850 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.5e-24
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 1 

Query: 1   MSAKLEESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAIN 60
           MSAKLE+SQQQ  ELS+SEEDRVQELHK+SQDR+RAW+S+LE VQKQH+MDAAALASAIN
Sbjct: 121 MSAKLEQSQQQVLELSASEEDRVQELHKISQDRDRAWQSELEAVQKQHSMDAAALASAIN 180

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAK 85
           EVQRLKVQL MVS S   RS LA+
Sbjct: 181 EVQRLKVQLEMVSDSELNRSKLAE 204

[Close]
BLAST of CmaCh09G011600 vs. TrEMBL
Match: F6HQZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02400 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.4e-19
Identity = 56/84 (66.67%), Postives = 73/84 (86.90%), Query Frame = 1 

Query: 1   MSAKLEESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAIN 60
           +SAKLEESQQQ  ELS+SEEDRVQEL K+SQDR+RAW+S+LE VQKQH+MD+AAL SA+N
Sbjct: 237 VSAKLEESQQQLLELSASEEDRVQELRKISQDRDRAWQSELEAVQKQHSMDSAALVSAMN 296

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAK 85
           E+Q+LK+QL MV+ S  +++  A+
Sbjct: 297 EIQKLKIQLEMVADSEASQTKHAE 320

[Close]
BLAST of CmaCh09G011600 vs. TrEMBL
Match: A0A0D2RMG6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-18
Identity = 55/84 (65.48%), Postives = 71/84 (84.52%), Query Frame = 1 

Query: 1   MSAKLEESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAIN 60
           MSAKLEES+QQ  E+S+SE+DRVQEL KLSQDR+RAW+S+LE VQKQH+MD+AALASA+N
Sbjct: 120 MSAKLEESEQQLMEISASEDDRVQELRKLSQDRDRAWQSELEAVQKQHSMDSAALASAMN 179

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAK 85
           E+Q+LKVQL    +S   ++  A+
Sbjct: 180 EIQKLKVQLEKAHESEALQTKHAE 203

[Close]
BLAST of CmaCh09G011600 vs. TrEMBL
Match: A0A0B0PSX8_GOSAR (Interactor of constitutive active ROPs 2, chloroplastic-like protein OS=Gossypium arboreum GN=F383_10213 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-18
Identity = 55/84 (65.48%), Postives = 71/84 (84.52%), Query Frame = 1 

Query: 1   MSAKLEESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAIN 60
           MSAKLEES+QQ  E+S+SE+DRVQEL KLSQDR+RAW+S+LE VQKQH+MD+AALASA+N
Sbjct: 120 MSAKLEESEQQLMEISASEDDRVQELRKLSQDRDRAWQSELEAVQKQHSMDSAALASAMN 179

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAK 85
           E+Q+LKVQL    +S   ++  A+
Sbjct: 180 EIQKLKVQLEKAHESEALQTKHAE 203

[Close]
BLAST of CmaCh09G011600 vs. TrEMBL
Match: A0A0D2RMH0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-18
Identity = 55/84 (65.48%), Postives = 71/84 (84.52%), Query Frame = 1 

Query: 1   MSAKLEESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAIN 60
           MSAKLEES+QQ  E+S+SE+DRVQEL KLSQDR+RAW+S+LE VQKQH+MD+AALASA+N
Sbjct: 120 MSAKLEESEQQLMEISASEDDRVQELRKLSQDRDRAWQSELEAVQKQHSMDSAALASAMN 179

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAK 85
           E+Q+LKVQL    +S   ++  A+
Sbjct: 180 EIQKLKVQLEKAHESEALQTKHAE 203

[Close]
BLAST of CmaCh09G011600 vs. TAIR10
Match: AT2G37080.1 (AT2G37080.1 ROP interactive partner 3)

HSP 1 Score: 77.8 bits (190), Expect = 9.4e-15
Identity = 44/89 (49.44%), Postives = 67/89 (75.28%), Query Frame = 1 

Query: 6   EESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAINEVQRL 65
           EE++QQ  E+++SE+ R+ EL KLSQ+R++AW+S+LE +Q+QHAMD+AAL+S +NEVQ+L
Sbjct: 112 EETKQQLMEINASEDSRIDELRKLSQERDKAWQSELEAMQRQHAMDSAALSSTMNEVQKL 171

Query: 66  KVQL-------NMVSKSNQTRSNLAKIGG 88
           K QL       N+  + N+T S + K+ G
Sbjct: 172 KAQLSESENVENLRMELNETLSLVEKLRG 200

[Close]
BLAST of CmaCh09G011600 vs. TAIR10
Match: AT3G53350.1 (AT3G53350.1 ROP interactive partner 4)

HSP 1 Score: 68.6 bits (166), Expect = 5.7e-12
Identity = 33/64 (51.56%), Postives = 54/64 (84.38%), Query Frame = 1 

Query: 6   EESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAINEVQRL 65
           E+++ Q  ++++SE+ R++EL KLSQ+R++ W+S+LE +Q+QH MD+ AL+SAINEVQ+L
Sbjct: 109 EDAKHQLMDINASEDSRIEELRKLSQERDKTWQSELEAMQRQHGMDSTALSSAINEVQKL 168

Query: 66  KVQL 70
           K +L
Sbjct: 169 KSKL 172

[Close]
BLAST of CmaCh09G011600 vs. TAIR10
Match: AT4G38710.2 (AT4G38710.2 glycine-rich protein)

HSP 1 Score: 62.8 bits (151), Expect = 3.1e-10
Identity = 47/118 (39.83%), Postives = 62/118 (52.54%), Query Frame = 1 

Query: 117 GGGFRNYGSNGSYE-----RSNRYSNGDDSSNSKWGLSRVFDENRRKKDEGNSGSGG--- 176
           GGG   +   GS+E     R ++Y  G  S +  WG         R+++E  + +G    
Sbjct: 223 GGGGDRFEKRGSFESLSRNRDSQYGGGGGSESDTWG---------RRREESGAANGSPPP 282

Query: 177 -GGSRPKLSLQPRTLPVNDVK----SSKISGTTTRSKSSNPFGMVRPREEVLAEKRHD 222
            GGSRP+L LQPRTLPV  V+     S +     + K +NPFG  RPREEVLAEK  D
Sbjct: 283 SGGSRPRLVLQPRTLPVAVVEVVKPESPVLVIVEKPKGANPFGNARPREEVLAEKGQD 331

[Close]
BLAST of CmaCh09G011600 vs. NCBI nr
Match: gi|659083992|ref|XP_008442649.1| (PREDICTED: LOW QUALITY PROTEIN: interactor of constitutive active ROPs 3-like [Cucumis melo])

HSP 1 Score: 120.9 bits (302), Expect = 2.7e-24
Identity = 67/84 (79.76%), Postives = 77/84 (91.67%), Query Frame = 1 

Query: 1   MSAKLEESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAIN 60
           MSAKLE+SQQQ  ELS+SEEDRVQELH++SQDR+RAW+S+LE VQKQH+MDAAALASAIN
Sbjct: 121 MSAKLEQSQQQVLELSASEEDRVQELHRISQDRDRAWQSELEAVQKQHSMDAAALASAIN 180

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAK 85
           EVQRLKVQL MVS+S  TRS LA+
Sbjct: 181 EVQRLKVQLEMVSESELTRSKLAE 204

[Close]
BLAST of CmaCh09G011600 vs. NCBI nr
Match: gi|778683764|ref|XP_011651941.1| (PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 7.9e-24
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 1 

Query: 1  MSAKLEESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAIN 60
          MSAKLE+SQQQ  ELS+SEEDRVQELHK+SQDR+RAW+S+LE VQKQH+MDAAALASAIN
Sbjct: 1  MSAKLEQSQQQVLELSASEEDRVQELHKISQDRDRAWQSELEAVQKQHSMDAAALASAIN 60

Query: 61 EVQRLKVQLNMVSKSNQTRSNLAK 85
          EVQRLKVQL MVS S   RS LA+
Sbjct: 61 EVQRLKVQLEMVSDSELNRSKLAE 84

[Close]
BLAST of CmaCh09G011600 vs. NCBI nr
Match: gi|700203804|gb|KGN58937.1| (hypothetical protein Csa_3G736850 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 7.9e-24
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 1 

Query: 1   MSAKLEESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAIN 60
           MSAKLE+SQQQ  ELS+SEEDRVQELHK+SQDR+RAW+S+LE VQKQH+MDAAALASAIN
Sbjct: 121 MSAKLEQSQQQVLELSASEEDRVQELHKISQDRDRAWQSELEAVQKQHSMDAAALASAIN 180

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAK 85
           EVQRLKVQL MVS S   RS LA+
Sbjct: 181 EVQRLKVQLEMVSDSELNRSKLAE 204

[Close]
BLAST of CmaCh09G011600 vs. NCBI nr
Match: gi|449440061|ref|XP_004137803.1| (PREDICTED: interactor of constitutive active ROPs 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 119.4 bits (298), Expect = 7.9e-24
Identity = 67/84 (79.76%), Postives = 75/84 (89.29%), Query Frame = 1 

Query: 1   MSAKLEESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAIN 60
           MSAKLE+SQQQ  ELS+SEEDRVQELHK+SQDR+RAW+S+LE VQKQH+MDAAALASAIN
Sbjct: 121 MSAKLEQSQQQVLELSASEEDRVQELHKISQDRDRAWQSELEAVQKQHSMDAAALASAIN 180

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAK 85
           EVQRLKVQL MVS S   RS LA+
Sbjct: 181 EVQRLKVQLEMVSDSELNRSKLAE 204

[Close]
BLAST of CmaCh09G011600 vs. NCBI nr
Match: gi|225439892|ref|XP_002279291.1| (PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X1 [Vitis vinifera])

HSP 1 Score: 104.0 bits (258), Expect = 3.5e-19
Identity = 56/84 (66.67%), Postives = 73/84 (86.90%), Query Frame = 1 

Query: 1   MSAKLEESQQQAFELSSSEEDRVQELHKLSQDRNRAWKSKLEDVQKQHAMDAAALASAIN 60
           +SAKLEESQQQ  ELS+SEEDRVQEL K+SQDR+RAW+S+LE VQKQH+MD+AAL SA+N
Sbjct: 117 VSAKLEESQQQLLELSASEEDRVQELRKISQDRDRAWQSELEAVQKQHSMDSAALVSAMN 176

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAK 85
           E+Q+LK+QL MV+ S  +++  A+
Sbjct: 177 EIQKLKIQLEMVADSEASQTKHAE 200

The following BLAST results are available for this feature:
BLAST of CmaCh09G011600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ICR2_ARATH1.7e-1349.44Interactor of constitutive active ROPs 2, chloroplastic OS=Arabidopsis thaliana ... [more]
ICR5_ARATH1.0e-1051.56Interactor of constitutive active ROPs 5 OS=Arabidopsis thaliana GN=ICR5 PE=1 SV... [more]
IF4B3_ARATH5.5e-0939.83Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana GN=EIF4B3 P... [more]
BLAST of CmaCh09G011600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDX4_CUCSA5.5e-2479.76Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736850 PE=4 SV=1[more]
F6HQZ3_VITVI2.4e-1966.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02400 PE=4 SV=... [more]
A0A0D2RMG6_GOSRA2.7e-1865.48Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1[more]
A0A0B0PSX8_GOSAR2.7e-1865.48Interactor of constitutive active ROPs 2, chloroplastic-like protein OS=Gossypiu... [more]
A0A0D2RMH0_GOSRA2.7e-1865.48Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1[more]
BLAST of CmaCh09G011600 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G37080.19.4e-1549.44 ROP interactive partner 3[more]
AT3G53350.15.7e-1251.56 ROP interactive partner 4[more]
AT4G38710.23.1e-1039.83 glycine-rich protein[more]
BLAST of CmaCh09G011600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659083992|ref|XP_008442649.1|2.7e-2479.76PREDICTED: LOW QUALITY PROTEIN: interactor of constitutive active ROPs 3-like [C... [more]
gi|778683764|ref|XP_011651941.1|7.9e-2479.76PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X2 [C... [more]
gi|700203804|gb|KGN58937.1|7.9e-2479.76hypothetical protein Csa_3G736850 [Cucumis sativus][more]
gi|449440061|ref|XP_004137803.1|7.9e-2479.76PREDICTED: interactor of constitutive active ROPs 3 isoform X1 [Cucumis sativus][more]
gi|225439892|ref|XP_002279291.1|3.5e-1966.67PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X1 [V... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010433EIF-4B_pln
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006446 regulation of translational initiation
cellular_component GO:0005840 ribosome
molecular_function GO:0003743 translation initiation factor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G011600.1CmaCh09G011600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010433Plant specific eukaryotic initiation factor 4BPFAMPF06273eIF-4Bcoord: 154..219
score: 2.
NoneNo IPR availablePANTHERPTHR34224:SF4SUBFAMILY NOT NAMEDcoord: 1..83
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G011600Wax gourdcmawgoB0039
CmaCh09G011600Cucurbita maxima (Rimu)cmacmaB050
CmaCh09G011600Cucurbita maxima (Rimu)cmacmaB056
CmaCh09G011600Cucumber (Gy14) v1cgycmaB0134
CmaCh09G011600Cucurbita moschata (Rifu)cmacmoB027
CmaCh09G011600Cucurbita moschata (Rifu)cmacmoB044
CmaCh09G011600Wild cucumber (PI 183967)cmacpiB039
CmaCh09G011600Cucumber (Chinese Long) v2cmacuB039
CmaCh09G011600Melon (DHL92) v3.5.1cmameB016
CmaCh09G011600Watermelon (Charleston Gray)cmawcgB008
CmaCh09G011600Watermelon (Charleston Gray)cmawcgB011
CmaCh09G011600Watermelon (97103) v1cmawmB010
CmaCh09G011600Watermelon (97103) v1cmawmB013
CmaCh09G011600Cucurbita pepo (Zucchini)cmacpeB046
CmaCh09G011600Cucurbita pepo (Zucchini)cmacpeB063
CmaCh09G011600Bottle gourd (USVL1VR-Ls)cmalsiB017
CmaCh09G011600Cucumber (Gy14) v2cgybcmaB883
CmaCh09G011600Melon (DHL92) v3.6.1cmamedB016
CmaCh09G011600Cucumber (Chinese Long) v3cmacucB0048
CmaCh09G011600Watermelon (97103) v2cmawmbB049
CmaCh09G011600Watermelon (97103) v2cmawmbB052