CmaCh09G011580 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGCTGCTGCATTGGCCTCTGCCATTCATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTGTCTAAATCCAACCAAACCCGAAGTAACCTCGCTAAGTCTATGGAAAAGCTTCAATCAGATGGAATCAAAACTTTTGAAGCCTACAACTCTTTGTCACCAAAATTGGAGGAATCAAAAGATCGGAATTCAGGGAGGGATGATTTTGATTTTTATGGAGGGAAGGGAAGATGCCAGAAAGATTTAAATTCCAGTCGTGTTGGTGGTGGATTTAGGAATTATGGCTCGAATGATTCGTATGAGAGGAGTAACAGGTATTTGAACGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTCTGGCAGCGACGGTGGTGGCAGTCGACCGAAGCTTAATCTGGAGCCACGTACGCTGCCGGTGAATGATGTGAAGTCGTCGAAGATATCAAGGACGACCGCGAGGTCTAAGAATTCAAACCCATTTGGAATGGTGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGA ATGGATGCTGCTGCATTGGCCTCTGCCATTCATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTGTCTAAATCCAACCAAACCCGAAGTAACCTCGCTAAGTCTATGGAAAAGCTTCAATCAGATGGAATCAAAACTTTTGAAGCCTACAACTCTTTGTCACCAAAATTGGAGGAATCAAAAGATCGGAATTCAGGGAGGGATGATTTTGATTTTTATGGAGGGAAGGGAAGATGCCAGAAAGATTTAAATTCCAGTCGTGTTGGTGGTGGATTTAGGAATTATGGCTCGAATGATTCGTATGAGAGGAGTAACAGGTATTTGAACGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTCTGGCAGCGACGGTGGTGGCAGTCGACCGAAGCTTAATCTGGAGCCACGTACGCTGCCGGTGAATGATGTGAAGTCGTCGAAGATATCAAGGACGACCGCGAGGTCTAAGAATTCAAACCCATTTGGAATGGTGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGA ATGGATGCTGCTGCATTGGCCTCTGCCATTCATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTGTCTAAATCCAACCAAACCCGAAGTAACCTCGCTAAGTCTATGGAAAAGCTTCAATCAGATGGAATCAAAACTTTTGAAGCCTACAACTCTTTGTCACCAAAATTGGAGGAATCAAAAGATCGGAATTCAGGGAGGGATGATTTTGATTTTTATGGAGGGAAGGGAAGATGCCAGAAAGATTTAAATTCCAGTCGTGTTGGTGGTGGATTTAGGAATTATGGCTCGAATGATTCGTATGAGAGGAGTAACAGGTATTTGAACGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTCTGGCAGCGACGGTGGTGGCAGTCGACCGAAGCTTAATCTGGAGCCACGTACGCTGCCGGTGAATGATGTGAAGTCGTCGAAGATATCAAGGACGACCGCGAGGTCTAAGAATTCAAACCCATTTGGAATGGTGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGA MDAAALASAIHEVQRLKVQLNMVSKSNQTRSNLAKSMEKLQSDGIKTFEAYNSLSPKLEESKDRNSGRDDFDFYGGKGRCQKDLNSSRVGGGFRNYGSNDSYERSNRYLNGDDSSNSKWGLSRVFDENRRKKDEGNSGSDGGGSRPKLNLEPRTLPVNDVKSSKISRTTARSKNSNPFGMVRPREEVLAEKGHD
BLAST of CmaCh09G011580 vs. Swiss-Prot
Match: IF4B3_ARATH (Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana GN=EIF4B3 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 2.2e-09 Identity = 51/120 (42.50%), Postives = 65/120 (54.17%), Query Frame = 1
BLAST of CmaCh09G011580 vs. TrEMBL
Match: A0A0A0K4M1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009760 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.1e-12 Identity = 68/176 (38.64%), Postives = 87/176 (49.43%), Query Frame = 1
BLAST of CmaCh09G011580 vs. TrEMBL
Match: M5VJ47_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007168mg PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.4e-09 Identity = 47/101 (46.53%), Postives = 60/101 (59.41%), Query Frame = 1
BLAST of CmaCh09G011580 vs. TrEMBL
Match: B9HRA2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0009s13280g PE=4 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 5.8e-09 Identity = 49/105 (46.67%), Postives = 57/105 (54.29%), Query Frame = 1
BLAST of CmaCh09G011580 vs. TrEMBL
Match: A0A0B0MIF4_GOSAR (Eukaryotic translation initiation factor 4H OS=Gossypium arboreum GN=F383_21562 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.9e-08 Identity = 53/136 (38.97%), Postives = 71/136 (52.21%), Query Frame = 1
BLAST of CmaCh09G011580 vs. TrEMBL
Match: F6I126_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g01950 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 6.4e-08 Identity = 52/132 (39.39%), Postives = 69/132 (52.27%), Query Frame = 1
BLAST of CmaCh09G011580 vs. TAIR10
Match: AT4G38710.2 (AT4G38710.2 glycine-rich protein) HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10 Identity = 51/120 (42.50%), Postives = 65/120 (54.17%), Query Frame = 1
BLAST of CmaCh09G011580 vs. NCBI nr
Match: gi|659094279|ref|XP_008447975.1| (PREDICTED: dentin sialophosphoprotein-like [Cucumis melo]) HSP 1 Score: 92.0 bits (227), Expect = 1.2e-15 Identity = 58/110 (52.73%), Postives = 69/110 (62.73%), Query Frame = 1
BLAST of CmaCh09G011580 vs. NCBI nr
Match: gi|449454189|ref|XP_004144838.1| (PREDICTED: uncharacterized protein LOC101206224 [Cucumis sativus]) HSP 1 Score: 81.6 bits (200), Expect = 1.6e-12 Identity = 68/176 (38.64%), Postives = 87/176 (49.43%), Query Frame = 1
BLAST of CmaCh09G011580 vs. NCBI nr
Match: gi|1021476145|ref|XP_016169710.1| (PREDICTED: eukaryotic translation initiation factor 4B1-like [Arachis ipaensis]) HSP 1 Score: 77.4 bits (189), Expect = 3.0e-11 Identity = 55/118 (46.61%), Postives = 68/118 (57.63%), Query Frame = 1
BLAST of CmaCh09G011580 vs. NCBI nr
Match: gi|297744651|emb|CBI37913.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 73.9 bits (180), Expect = 3.4e-10 Identity = 60/152 (39.47%), Postives = 77/152 (50.66%), Query Frame = 1
BLAST of CmaCh09G011580 vs. NCBI nr
Match: gi|645261258|ref|XP_008236206.1| (PREDICTED: S-antigen protein [Prunus mume]) HSP 1 Score: 70.5 bits (171), Expect = 3.7e-09 Identity = 47/101 (46.53%), Postives = 61/101 (60.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |