CmaCh09G011570 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G011570
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Interactor of constitutive active ROPs 2, chloroplastic-like protein
Location	Cma_Chr09 : 6700729 .. 6701757 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAAAAGCTTGAAGAATCTCAACAGCAGGTGTTTGAGCTCTCCGCTTCTGAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATCGCAATCGAGCATGGAAGTCCAAACTCGAAGCTGTTCAAAAGCAACACGCAATGGATGCTGCTGCATTGGCCTCTGCCATAAATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTGTCTAAATCTAACCAAACCCGAAGTAACCTCGCTAAGTCTGTGGAAAAGAATCAATCAGATGGAATCAAAGCTATTGAAGCCTACAACTCTTTGTCACCAAAATTGGAGGAATCAAAAGATCGGAATTCAGGGAGGGATGGCTTTGATTTTTATGGAGGGAAGGGAAGATGCCAGAAAGGTTTAAATTCCAGTCGTGTTGGTGGTGGATTTAGGAATTATTGCTCGAATGGTTCGTATGAGAGGAGTAACAGGTATTCGAATGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTCTGGCAGCGGCGGTGGTGGCAGTCAATCGAAGCTTAATCTGCAGCCACGTACGCTGCCGATGAATGATGTGAAGTCATCGAAGATATCAAGGACGACGGTGAGGTCCAAGAGTTCGAACCCATTTGGAATGGTGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGGAAAAAACTTGACAAGGAGTTAAAGTCGAAAATTATGGAAGTGTCAAGGGAGAAGACTGAAAAATCCAACGCCATTGGGAAAAAGAGCTTTGGCAATGGAATTGGTCAGGCTGCTGAGGACAAAATAGAGAGAAGCTGGAGGAAGCCGAGTTTCAATAACTCTAGACAAGTGGGGCGGGGTGCTCAACCTGATAAAAATCCTAGTGGTTTTGTGGATGCTAATTGGGCTGGTGACATGAACGACAGATGCTCCACAAGAGGTTTTTGTTTTACAGGAGACTCTATTGCAATTTCATGA

mRNA sequence

ATGTCTGAAAAGCTTGAAGAATCTCAACAGCAGGTGTTTGAGCTCTCCGCTTCTGAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATCGCAATCGAGCATGGAAGTCCAAACTCGAAGCTGTTCAAAAGCAACACGCAATGGATGCTGCTGCATTGGCCTCTGCCATAAATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTGTCTAAATCTAACCAAACCCGAAGTAACCTCGCTAAGTCTGTGGAAAAGAATCAATCAGATGGAATCAAAGCTATTGAAGCCTACAACTCTTTGTCACCAAAATTGGAGGAATCAAAAGATCGGAATTCAGGGAGGGATGGCTTTGATTTTTATGGAGGGAAGGGAAGATGCCAGAAAGGTTTAAATTCCAGTCGTGTTGGTGGTGGATTTAGGAATTATTGCTCGAATGGTTCGTATGAGAGGAGTAACAGGTATTCGAATGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTCTGGCAGCGGCGGTGGTGGCAGTCAATCGAAGCTTAATCTGCAGCCACGTACGCTGCCGATGAATGATGTGAAGTCATCGAAGATATCAAGGACGACGGTGAGGTCCAAGAGTTCGAACCCATTTGGAATGGTGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGGAAAAAACTTGACAAGGAGTTAAAGTCGAAAATTATGGAAGTGTCAAGGGAGAAGACTGAAAAATCCAACGCCATTGGGAAAAAGAGCTTTGGCAATGGAATTGGTCAGGCTGCTGAGGACAAAATAGAGAGAAGCTGGAGGAAGCCGAGTTTCAATAACTCTAGACAAGTGGGGCGGGGTGCTCAACCTGATAAAAATCCTAGTGGTTTTGTGGATGCTAATTGGGCTGGTGACATGAACGACAGATGCTCCACAAGAGGTTTTTGTTTTACAGGAGACTCTATTGCAATTTCATGA

Coding sequence (CDS)

ATGTCTGAAAAGCTTGAAGAATCTCAACAGCAGGTGTTTGAGCTCTCCGCTTCTGAGGAAGATCGTGTTCAAGAACTGCACAAACTTTCTCAAGATCGCAATCGAGCATGGAAGTCCAAACTCGAAGCTGTTCAAAAGCAACACGCAATGGATGCTGCTGCATTGGCCTCTGCCATAAATGAAGTTCAGAGGCTCAAGGTCCAGCTGAACATGGTGTCTAAATCTAACCAAACCCGAAGTAACCTCGCTAAGTCTGTGGAAAAGAATCAATCAGATGGAATCAAAGCTATTGAAGCCTACAACTCTTTGTCACCAAAATTGGAGGAATCAAAAGATCGGAATTCAGGGAGGGATGGCTTTGATTTTTATGGAGGGAAGGGAAGATGCCAGAAAGGTTTAAATTCCAGTCGTGTTGGTGGTGGATTTAGGAATTATTGCTCGAATGGTTCGTATGAGAGGAGTAACAGGTATTCGAATGGGGATGATTCATCTAACTCGAAGTGGGGTTTGTCAAGGGTCTTTGATGAAAATAGGAGGAAGAAAGATGAAGGTAATTCTGGCAGCGGCGGTGGTGGCAGTCAATCGAAGCTTAATCTGCAGCCACGTACGCTGCCGATGAATGATGTGAAGTCATCGAAGATATCAAGGACGACGGTGAGGTCCAAGAGTTCGAACCCATTTGGAATGGTGAGGCCGAGGGAAGAGGTTCTAGCTGAGAAAGGACATGATTGGAAAAAACTTGACAAGGAGTTAAAGTCGAAAATTATGGAAGTGTCAAGGGAGAAGACTGAAAAATCCAACGCCATTGGGAAAAAGAGCTTTGGCAATGGAATTGGTCAGGCTGCTGAGGACAAAATAGAGAGAAGCTGGAGGAAGCCGAGTTTCAATAACTCTAGACAAGTGGGGCGGGGTGCTCAACCTGATAAAAATCCTAGTGGTTTTGTGGATGCTAATTGGGCTGGTGACATGAACGACAGATGCTCCACAAGAGGTTTTTGTTTTACAGGAGACTCTATTGCAATTTCATGA

Protein sequence

MSEKLEESQQQVFELSASEEDRVQELHKLSQDRNRAWKSKLEAVQKQHAMDAAALASAINEVQRLKVQLNMVSKSNQTRSNLAKSVEKNQSDGIKAIEAYNSLSPKLEESKDRNSGRDGFDFYGGKGRCQKGLNSSRVGGGFRNYCSNGSYERSNRYSNGDDSSNSKWGLSRVFDENRRKKDEGNSGSGGGGSQSKLNLQPRTLPMNDVKSSKISRTTVRSKSSNPFGMVRPREEVLAEKGHDWKKLDKELKSKIMEVSREKTEKSNAIGKKSFGNGIGQAAEDKIERSWRKPSFNNSRQVGRGAQPDKNPSGFVDANWAGDMNDRCSTRGFCFTGDSIAIS

Homology

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BLAST of CmaCh09G011570 vs. Swiss-Prot
Match: IF4B3_ARATH (Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana GN=EIF4B3 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 1.0e-17
Identity = 69/184 (37.50%), Postives = 103/184 (55.98%), Query Frame = 1


Query: 139 GGGFRNYCSNGSYE-----RSNRYSNGDDSSNSKWGLSRVFDENRRKKDEGNSGSGG--- 198
           GGG   +   GS+E     R ++Y  G  S +  WG         R+++E  + +G    
Sbjct: 223 GGGGDRFEKRGSFESLSRNRDSQYGGGGGSESDTWG---------RRREESGAANGSPPP 282

Query: 199 -GGSQSKLNLQPRTLPMNDVK----SSKISRTTVRSKSSNPFGMVRPREEVLAEKGHDWK 258
            GGS+ +L LQPRTLP+  V+     S +     + K +NPFG  RPREEVLAEKG DWK
Sbjct: 283 SGGSRPRLVLQPRTLPVAVVEVVKPESPVLVIVEKPKGANPFGNARPREEVLAEKGQDWK 342

Query: 259 KLDKELKSKIMEVSREKTEKSN--AIGKKSFGNGIGQAAEDKIERSWRKPSFNNSRQVGR 308
           ++D++L+++ ++      EK N  + GK  FG G G+  E++IERSWRK S  +S +  +
Sbjct: 343 EIDEKLEAEKLKDIAAAMEKPNEKSTGKMGFGLGNGRKDEERIERSWRK-STEHSEEDAQ 396

[Close]

BLAST of CmaCh09G011570 vs. Swiss-Prot
Match: ICR2_ARATH (Interactor of constitutive active ROPs 2, chloroplastic OS=Arabidopsis thaliana GN=ICR2 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.5e-16
Identity = 59/147 (40.14%), Postives = 90/147 (61.22%), Query Frame = 1


Query: 3   EKLEESQQQVFELSASEEDRVQELHKLSQDRNRAWKSKLEAVQKQHAMDAAALASAINEV 62
           ++ EE++QQ+ E++ASE+ R+ EL KLSQ+R++AW+S+LEA+Q+QHAMD+AAL+S +NEV
Sbjct: 109 DQAEETKQQLMEINASEDSRIDELRKLSQERDKAWQSELEAMQRQHAMDSAALSSTMNEV 168

Query: 63  QRLKVQL-------NMVSKSNQTRSNLAK------------------------------- 112
           Q+LK QL       N+  + N+T S + K                               
Sbjct: 169 QKLKAQLSESENVENLRMELNETLSLVEKLRGELFDAKEGEAQAHEIVSGTEKQLEIANL 228

[Close]

BLAST of CmaCh09G011570 vs. Swiss-Prot
Match: ICR5_ARATH (Interactor of constitutive active ROPs 5 OS=Arabidopsis thaliana GN=ICR5 PE=1 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 4.8e-12
Identity = 44/114 (38.60%), Postives = 82/114 (71.93%), Query Frame = 1


Query: 3   EKLEESQQQVFELSASEEDRVQELHKLSQDRNRAWKSKLEAVQKQHAMDAAALASAINEV 62
           E+ E+++ Q+ +++ASE+ R++EL KLSQ+R++ W+S+LEA+Q+QH MD+ AL+SAINEV
Sbjct: 106 EEAEDAKHQLMDINASEDSRIEELRKLSQERDKTWQSELEAMQRQHGMDSTALSSAINEV 165

Query: 63  QRLKVQL----NMVSKSNQTRSNLAKSVEKNQSDGIKAIEAYNSLSPKLEESKD 113
           Q+LK +L    + + +S     +L K V + + + + + ++ +S+  ++EE K+
Sbjct: 166 QKLKSKLFESESELEQSKYEVRSLEKLVRQLEEERVNSRDSSSSM--EVEELKE 217

[Close]

BLAST of CmaCh09G011570 vs. TrEMBL
Match: A0A0A0K4M1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009760 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.2e-31
Identity = 87/139 (62.59%), Postives = 103/139 (74.10%), Query Frame = 1


Query: 158 SNGDDSSNSKWGLSRVFDENRRKKDEGNSGSGGGGSQSKLNLQPRTLPMNDVKSSKISRT 217
           ++G  + +  WG         RKK+EGN+G G   S+ KL+LQPRTLP+ D KSS+IS T
Sbjct: 220 ASGGGADSDNWG---------RKKEEGNAG-GVISSRPKLSLQPRTLPVVDGKSSEISAT 279

Query: 218 TVRSKSSNPFGMVRPREEVLAEKGHDWKKLDKELKSKIMEVS-REKTEKSNAI--GKKSF 277
             RSKSSNPFG  RPREEVLAEKGHDWKKLD++L+SKI EVS  EKTEKSN I   K+SF
Sbjct: 280 AARSKSSNPFGAARPREEVLAEKGHDWKKLDEQLESKIKEVSVEEKTEKSNPIFFRKRSF 339

Query: 278 GNGIGQAAEDKIERSWRKP 294
           GNG  +AAED+ ERSWRKP
Sbjct: 340 GNGNSRAAEDRTERSWRKP 348

[Close]

BLAST of CmaCh09G011570 vs. TrEMBL
Match: A0A0A0LDX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736850 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.0e-25
Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = 1


Query: 1   MSEKLEESQQQVFELSASEEDRVQELHKLSQDRNRAWKSKLEAVQKQHAMDAAALASAIN 60
           MS KLE+SQQQV ELSASEEDRVQELHK+SQDR+RAW+S+LEAVQKQH+MDAAALASAIN
Sbjct: 121 MSAKLEQSQQQVLELSASEEDRVQELHKISQDRDRAWQSELEAVQKQHSMDAAALASAIN 180

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAKSVEKNQSDGIKAIEAYNSLSPKLEE 110
           EVQRLKVQL MVS S   RS LA+S +    D    +    SL  KL++
Sbjct: 181 EVQRLKVQLEMVSDSELNRSKLAESSQTEMDDLRTQLSETLSLVEKLKD 229

[Close]

BLAST of CmaCh09G011570 vs. TrEMBL
Match: F6HQZ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02400 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.5e-20
Identity = 58/85 (68.24%), Postives = 75/85 (88.24%), Query Frame = 1


Query: 1   MSEKLEESQQQVFELSASEEDRVQELHKLSQDRNRAWKSKLEAVQKQHAMDAAALASAIN 60
           +S KLEESQQQ+ ELSASEEDRVQEL K+SQDR+RAW+S+LEAVQKQH+MD+AAL SA+N
Sbjct: 237 VSAKLEESQQQLLELSASEEDRVQELRKISQDRDRAWQSELEAVQKQHSMDSAALVSAMN 296

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAKS 86
           E+Q+LK+QL MV+ S  +++  A+S
Sbjct: 297 EIQKLKIQLEMVADSEASQTKHAES 321

[Close]

BLAST of CmaCh09G011570 vs. TrEMBL
Match: M5VJ47_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007168mg PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.7e-19
Identity = 78/185 (42.16%), Postives = 105/185 (56.76%), Query Frame = 1


Query: 119 GFDFYGGKGRCQKGLNSSRVGGGFRNYCSNGSYERSNRY---SNGDDSSNSKWGLSRVFD 178
           GF   GG      G       GG         ++R  R    SNG  + +  WG      
Sbjct: 195 GFTSDGGADSDNWGRKKEESNGG-------SGFDRERRVGFVSNGGGADSEVWG------ 254

Query: 179 ENRRKKDEGNSGSGGGGSQSKLNLQPRTLPMNDVKSSKISRTTVRSKSSNPFGMVRPREE 238
              +KK+E N G      + +LNLQPRTLP+++ ++S  S T  +SK SNPFG  RPREE
Sbjct: 255 ---KKKEESNGGLSESTGRPRLNLQPRTLPVSN-ETSPGSTTVPKSKGSNPFGEARPREE 314

Query: 239 VLAEKGHDWKKLDKELKS-KIMEVSREKTEKSNAIGKKSFGNGIGQAAEDKIERSWRKPS 298
           VLAEKG DWKK+D+EL+S KI EV+  + + S + GK+SFG G G+A  D+ ER+WRKP 
Sbjct: 315 VLAEKGKDWKKIDEELESVKIKEVA--ERDHSPSFGKRSFGIGNGRAG-DRTERAWRKPD 359

Query: 299 FNNSR 300
             ++R
Sbjct: 375 VADAR 359

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BLAST of CmaCh09G011570 vs. TrEMBL
Match: A0A0D2RMH0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 8.3e-19
Identity = 57/85 (67.06%), Postives = 73/85 (85.88%), Query Frame = 1


Query: 1   MSEKLEESQQQVFELSASEEDRVQELHKLSQDRNRAWKSKLEAVQKQHAMDAAALASAIN 60
           MS KLEES+QQ+ E+SASE+DRVQEL KLSQDR+RAW+S+LEAVQKQH+MD+AALASA+N
Sbjct: 120 MSAKLEESEQQLMEISASEDDRVQELRKLSQDRDRAWQSELEAVQKQHSMDSAALASAMN 179

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAKS 86
           E+Q+LKVQL    +S   ++  A+S
Sbjct: 180 EIQKLKVQLEKAHESEALQTKHAES 204

[Close]

BLAST of CmaCh09G011570 vs. TAIR10
Match: AT4G38710.2 (AT4G38710.2 glycine-rich protein)

HSP 1 Score: 92.8 bits (229), Expect = 4.3e-19
Identity = 66/169 (39.05%), Postives = 96/169 (56.80%), Query Frame = 1


Query: 139 GGGFRNYCSNGSYE-----RSNRYSNGDDSSNSKWGLSRVFDENRRKKDEGNSGSGG--- 198
           GGG   +   GS+E     R ++Y  G  S +  WG         R+++E  + +G    
Sbjct: 223 GGGGDRFEKRGSFESLSRNRDSQYGGGGGSESDTWG---------RRREESGAANGSPPP 282

Query: 199 -GGSQSKLNLQPRTLPMNDVK----SSKISRTTVRSKSSNPFGMVRPREEVLAEKGHDWK 258
            GGS+ +L LQPRTLP+  V+     S +     + K +NPFG  RPREEVLAEKG DWK
Sbjct: 283 SGGSRPRLVLQPRTLPVAVVEVVKPESPVLVIVEKPKGANPFGNARPREEVLAEKGQDWK 342

Query: 259 KLDKELKSKIMEVSREKTEKSN--AIGKKSFGNGIGQAAEDKIERSWRK 293
           ++D++L+++ ++      EK N  + GK  FG G G+  E++IERSWRK
Sbjct: 343 EIDEKLEAEKLKDIAAAMEKPNEKSTGKMGFGLGNGRKDEERIERSWRK 382

[Close]

BLAST of CmaCh09G011570 vs. TAIR10
Match: AT2G37080.1 (AT2G37080.1 ROP interactive partner 3)

HSP 1 Score: 86.7 bits (213), Expect = 3.1e-17
Identity = 59/147 (40.14%), Postives = 90/147 (61.22%), Query Frame = 1


Query: 3   EKLEESQQQVFELSASEEDRVQELHKLSQDRNRAWKSKLEAVQKQHAMDAAALASAINEV 62
           ++ EE++QQ+ E++ASE+ R+ EL KLSQ+R++AW+S+LEA+Q+QHAMD+AAL+S +NEV
Sbjct: 109 DQAEETKQQLMEINASEDSRIDELRKLSQERDKAWQSELEAMQRQHAMDSAALSSTMNEV 168

Query: 63  QRLKVQL-------NMVSKSNQTRSNLAK------------------------------- 112
           Q+LK QL       N+  + N+T S + K                               
Sbjct: 169 QKLKAQLSESENVENLRMELNETLSLVEKLRGELFDAKEGEAQAHEIVSGTEKQLEIANL 228

[Close]

BLAST of CmaCh09G011570 vs. TAIR10
Match: AT3G53350.1 (AT3G53350.1 ROP interactive partner 4)

HSP 1 Score: 73.6 bits (179), Expect = 2.7e-13
Identity = 44/114 (38.60%), Postives = 82/114 (71.93%), Query Frame = 1


Query: 3   EKLEESQQQVFELSASEEDRVQELHKLSQDRNRAWKSKLEAVQKQHAMDAAALASAINEV 62
           E+ E+++ Q+ +++ASE+ R++EL KLSQ+R++ W+S+LEA+Q+QH MD+ AL+SAINEV
Sbjct: 106 EEAEDAKHQLMDINASEDSRIEELRKLSQERDKTWQSELEAMQRQHGMDSTALSSAINEV 165

Query: 63  QRLKVQL----NMVSKSNQTRSNLAKSVEKNQSDGIKAIEAYNSLSPKLEESKD 113
           Q+LK +L    + + +S     +L K V + + + + + ++ +S+  ++EE K+
Sbjct: 166 QKLKSKLFESESELEQSKYEVRSLEKLVRQLEEERVNSRDSSSSM--EVEELKE 217

[Close]

BLAST of CmaCh09G011570 vs. NCBI nr
Match: gi|659094279|ref|XP_008447975.1| (PREDICTED: dentin sialophosphoprotein-like [Cucumis melo])

HSP 1 Score: 144.1 bits (362), Expect = 4.7e-31
Identity = 92/163 (56.44%), Postives = 111/163 (68.10%), Query Frame = 1


Query: 134 NSSRVGGGFRNYCSNGSYERSNRYSNGDDSSNSKWGLSRVFDENRRKKDEGNSGSGGGGS 193
           N S +  G R +       R    ++G  + +  WG         RKK+EGN+G G  GS
Sbjct: 202 NKSNIPSGGRRFDRE---RRGGFTASGGGADSDNWG---------RKKEEGNAG-GVIGS 261

Query: 194 QSKLNLQPRTLPMNDVKSSKISRTTVRSKSSNPFGMVRPREEVLAEKGHDWKKLDKELKS 253
           + KL+LQPRTLP+ D KSS+IS T  RSKSSNPFG  RPREEVLAEKGHDWKKLD++L+S
Sbjct: 262 RPKLSLQPRTLPVGDGKSSEISATAARSKSSNPFGAARPREEVLAEKGHDWKKLDEQLES 321

Query: 254 KIMEVS-REKTEKSNAIG--KKSFGNGIGQAAEDKIERSWRKP 294
           KI EVS  EKTEKSNAI   K+SF NG  +AAED+ E+SWRKP
Sbjct: 322 KIKEVSVEEKTEKSNAISFRKRSFDNGNSRAAEDRTEKSWRKP 351

[Close]

BLAST of CmaCh09G011570 vs. NCBI nr
Match: gi|449454189|ref|XP_004144838.1| (PREDICTED: uncharacterized protein LOC101206224 [Cucumis sativus])

HSP 1 Score: 143.7 bits (361), Expect = 6.1e-31
Identity = 87/139 (62.59%), Postives = 103/139 (74.10%), Query Frame = 1


Query: 158 SNGDDSSNSKWGLSRVFDENRRKKDEGNSGSGGGGSQSKLNLQPRTLPMNDVKSSKISRT 217
           ++G  + +  WG         RKK+EGN+G G   S+ KL+LQPRTLP+ D KSS+IS T
Sbjct: 220 ASGGGADSDNWG---------RKKEEGNAG-GVISSRPKLSLQPRTLPVVDGKSSEISAT 279

Query: 218 TVRSKSSNPFGMVRPREEVLAEKGHDWKKLDKELKSKIMEVS-REKTEKSNAI--GKKSF 277
             RSKSSNPFG  RPREEVLAEKGHDWKKLD++L+SKI EVS  EKTEKSN I   K+SF
Sbjct: 280 AARSKSSNPFGAARPREEVLAEKGHDWKKLDEQLESKIKEVSVEEKTEKSNPIFFRKRSF 339

Query: 278 GNGIGQAAEDKIERSWRKP 294
           GNG  +AAED+ ERSWRKP
Sbjct: 340 GNGNSRAAEDRTERSWRKP 348

[Close]

BLAST of CmaCh09G011570 vs. NCBI nr
Match: gi|700203804|gb|KGN58937.1| (hypothetical protein Csa_3G736850 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 2.9e-25
Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = 1


Query: 1   MSEKLEESQQQVFELSASEEDRVQELHKLSQDRNRAWKSKLEAVQKQHAMDAAALASAIN 60
           MS KLE+SQQQV ELSASEEDRVQELHK+SQDR+RAW+S+LEAVQKQH+MDAAALASAIN
Sbjct: 121 MSAKLEQSQQQVLELSASEEDRVQELHKISQDRDRAWQSELEAVQKQHSMDAAALASAIN 180

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAKSVEKNQSDGIKAIEAYNSLSPKLEE 110
           EVQRLKVQL MVS S   RS LA+S +    D    +    SL  KL++
Sbjct: 181 EVQRLKVQLEMVSDSELNRSKLAESSQTEMDDLRTQLSETLSLVEKLKD 229

[Close]

BLAST of CmaCh09G011570 vs. NCBI nr
Match: gi|778683764|ref|XP_011651941.1| (PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 2.9e-25
Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = 1


Query: 1   MSEKLEESQQQVFELSASEEDRVQELHKLSQDRNRAWKSKLEAVQKQHAMDAAALASAIN 60
           MS KLE+SQQQV ELSASEEDRVQELHK+SQDR+RAW+S+LEAVQKQH+MDAAALASAIN
Sbjct: 1   MSAKLEQSQQQVLELSASEEDRVQELHKISQDRDRAWQSELEAVQKQHSMDAAALASAIN 60

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAKSVEKNQSDGIKAIEAYNSLSPKLEE 110
           EVQRLKVQL MVS S   RS LA+S +    D    +    SL  KL++
Sbjct: 61  EVQRLKVQLEMVSDSELNRSKLAESSQTEMDDLRTQLSETLSLVEKLKD 109

[Close]

BLAST of CmaCh09G011570 vs. NCBI nr
Match: gi|449440061|ref|XP_004137803.1| (PREDICTED: interactor of constitutive active ROPs 3 isoform X1 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 2.9e-25
Identity = 75/109 (68.81%), Postives = 86/109 (78.90%), Query Frame = 1


Query: 1   MSEKLEESQQQVFELSASEEDRVQELHKLSQDRNRAWKSKLEAVQKQHAMDAAALASAIN 60
           MS KLE+SQQQV ELSASEEDRVQELHK+SQDR+RAW+S+LEAVQKQH+MDAAALASAIN
Sbjct: 121 MSAKLEQSQQQVLELSASEEDRVQELHKISQDRDRAWQSELEAVQKQHSMDAAALASAIN 180

Query: 61  EVQRLKVQLNMVSKSNQTRSNLAKSVEKNQSDGIKAIEAYNSLSPKLEE 110
           EVQRLKVQL MVS S   RS LA+S +    D    +    SL  KL++
Sbjct: 181 EVQRLKVQLEMVSDSELNRSKLAESSQTEMDDLRTQLSETLSLVEKLKD 229

The following BLAST results are available for this feature:

BLAST of CmaCh09G011570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IF4B3_ARATH	1.0e-17	37.50	Eukaryotic translation initiation factor 4B3 OS=Arabidopsis thaliana GN=EIF4B3 P...	[more]
ICR2_ARATH	5.5e-16	40.14	Interactor of constitutive active ROPs 2, chloroplastic OS=Arabidopsis thaliana ...	[more]
ICR5_ARATH	4.8e-12	38.60	Interactor of constitutive active ROPs 5 OS=Arabidopsis thaliana GN=ICR5 PE=1 SV...	[more]

BLAST of CmaCh09G011570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4M1_CUCSA	4.2e-31	62.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G009760 PE=4 SV=1	[more]
A0A0A0LDX4_CUCSA	2.0e-25	68.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736850 PE=4 SV=1	[more]
F6HQZ3_VITVI	7.5e-20	68.24	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0040g02400 PE=4 SV=...	[more]
M5VJ47_PRUPE	3.7e-19	42.16	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007168mg PE=4 SV=1	[more]
A0A0D2RMH0_GOSRA	8.3e-19	67.06	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G1686001 PE=4 SV=1	[more]

BLAST of CmaCh09G011570 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38710.2	4.3e-19	39.05	glycine-rich protein	[more]
AT2G37080.1	3.1e-17	40.14	ROP interactive partner 3	[more]
AT3G53350.1	2.7e-13	38.60	ROP interactive partner 4	[more]

BLAST of CmaCh09G011570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094279\|ref\|XP_008447975.1\|	4.7e-31	56.44	PREDICTED: dentin sialophosphoprotein-like [Cucumis melo]	[more]
gi\|449454189\|ref\|XP_004144838.1\|	6.1e-31	62.59	PREDICTED: uncharacterized protein LOC101206224 [Cucumis sativus]	[more]
gi\|700203804\|gb\|KGN58937.1\|	2.9e-25	68.81	hypothetical protein Csa_3G736850 [Cucumis sativus]	[more]
gi\|778683764\|ref\|XP_011651941.1\|	2.9e-25	68.81	PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X2 [C...	[more]
gi\|449440061\|ref\|XP_004137803.1\|	2.9e-25	68.81	PREDICTED: interactor of constitutive active ROPs 3 isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010433	EIF-4B_pln

Vocabulary: **Molecular Function**
Term	Definition
GO:0003743	translation initiation factor activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G011570.1	CmaCh09G011570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010433	Plant specific eukaryotic initiation factor 4B	PFAM	PF06273	eIF-4B	coord: 191..266 score: 2.4
None	No IPR available	PANTHER	PTHR34224:SF4	SUBFAMILY NOT NAMED	coord: 1..87 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G011570	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G011570	Cucurbita moschata (Rifu)	cmacmoB044
CmaCh09G011570	Wild cucumber (PI 183967)	cmacpiB039
CmaCh09G011570	Cucumber (Chinese Long) v2	cmacuB039
CmaCh09G011570	Melon (DHL92) v3.5.1	cmameB016
CmaCh09G011570	Watermelon (Charleston Gray)	cmawcgB008
CmaCh09G011570	Watermelon (Charleston Gray)	cmawcgB011
CmaCh09G011570	Watermelon (97103) v1	cmawmB010
CmaCh09G011570	Watermelon (97103) v1	cmawmB013
CmaCh09G011570	Cucurbita pepo (Zucchini)	cmacpeB046
CmaCh09G011570	Cucurbita pepo (Zucchini)	cmacpeB063
CmaCh09G011570	Bottle gourd (USVL1VR-Ls)	cmalsiB017
CmaCh09G011570	Cucumber (Gy14) v2	cgybcmaB883
CmaCh09G011570	Melon (DHL92) v3.6.1	cmamedB016
CmaCh09G011570	Cucumber (Chinese Long) v3	cmacucB0048
CmaCh09G011570	Watermelon (97103) v2	cmawmbB049
CmaCh09G011570	Watermelon (97103) v2	cmawmbB052
CmaCh09G011570	Wax gourd	cmawgoB0039
CmaCh09G011570	Cucurbita maxima (Rimu)	cmacmaB050
CmaCh09G011570	Cucurbita maxima (Rimu)	cmacmaB056
CmaCh09G011570	Cucumber (Gy14) v1	cgycmaB0134