CmaCh09G011080 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTCCTCCGTCTATCATTGTCCATCTTGTTATCGCAGTTTGCGTGGTAGCTTTAAGCTCATCATCCACAACTGCTGAAGGCTACGACGACTACTATTCTCCTCCTCCACCTGTCAAATACTCTTCGCCGCCACCACCTGCCTACTACTCTCCTCCACCTCCTAAGAAGGACGACGAATACAAATCTCCTCCTCCACCGGAAGTAAAGAAGTCTCCTCCACCACCACCTCCACGAAAGAAGCCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCGCCACCACCTCCACGAAAGAAGTCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCGCCCCCACCTCCACGAAAGAAGTCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCGCCCCCACCTCCACGAAAGAAGTCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCGCCCCCACCTCCACGAAAGAAGTCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCTCCACCGCCGCCACGAAAGAAGTCTCCACCTCCGCCACCGCCAAAGAAGTCTCCTCCGCCACCCTCGCCCGTGTACAAGTCGCCTCCTCCCCCACCATCGCCTTACTACTACTAG ATGGGTCCTCCGTCTATCATTGTCCATCTTGTTATCGCAGTTTGCGTGGTAGCTTTAAGCTCATCATCCACAACTGCTGAAGGCTACGACGACTACTATTCTCCTCCTCCACCTGTCAAATACTCTTCGCCGCCACCACCTGCCTACTACTCTCCTCCACCTCCTAAGAAGGACGACGAATACAAATCTCCTCCTCCACCGGAAGTAAAGAAGTCTCCTCCACCACCACCTCCACGAAAGAAGCCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCGCCACCACCTCCACGAAAGAAGTCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCGCCCCCACCTCCACGAAAGAAGTCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCGCCCCCACCTCCACGAAAGAAGTCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCGCCCCCACCTCCACGAAAGAAGTCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCTCCACCGCCGCCACGAAAGAAGTCTCCACCTCCGCCACCGCCAAAGAAGTCTCCTCCGCCACCCTCGCCCGTGTACAAGTCGCCTCCTCCCCCACCATCGCCTTACTACTACTAG ATGGGTCCTCCGTCTATCATTGTCCATCTTGTTATCGCAGTTTGCGTGGTAGCTTTAAGCTCATCATCCACAACTGCTGAAGGCTACGACGACTACTATTCTCCTCCTCCACCTGTCAAATACTCTTCGCCGCCACCACCTGCCTACTACTCTCCTCCACCTCCTAAGAAGGACGACGAATACAAATCTCCTCCTCCACCGGAAGTAAAGAAGTCTCCTCCACCACCACCTCCACGAAAGAAGCCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCGCCACCACCTCCACGAAAGAAGTCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCGCCCCCACCTCCACGAAAGAAGTCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCGCCCCCACCTCCACGAAAGAAGTCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCGCCCCCACCTCCACGAAAGAAGTCACCCCCTCCACCCGCACCAAAGAAATCTCCTCCTCCACCGCCGCCACGAAAGAAGTCTCCACCTCCGCCACCGCCAAAGAAGTCTCCTCCGCCACCCTCGCCCGTGTACAAGTCGCCTCCTCCCCCACCATCGCCTTACTACTACTAG MGPPSIIVHLVIAVCVVALSSSSTTAEGYDDYYSPPPPVKYSSPPPPAYYSPPPPKKDDEYKSPPPPEVKKSPPPPPPRKKPPPPPAPKKSPPPPPPRKKSPPPPAPKKSPPPPPPRKKSPPPPAPKKSPPPPPPRKKSPPPPAPKKSPPPPPPRKKSPPPPAPKKSPPPPPPRKKSPPPPPPKKSPPPPSPVYKSPPPPPSPYYY
BLAST of CmaCh09G011080 vs. TrEMBL
Match: A0A068VKQ7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00010544001 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11 Identity = 129/177 (72.88%), Postives = 131/177 (74.01%), Query Frame = 1
BLAST of CmaCh09G011080 vs. TrEMBL
Match: A0A103XZ39_CYNCS (Extensin repeat-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_022219 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.4e-08 Identity = 140/236 (59.32%), Postives = 150/236 (63.56%), Query Frame = 1
BLAST of CmaCh09G011080 vs. TrEMBL
Match: Q9FSG1_NICSY (Putative extensin OS=Nicotiana sylvestris GN=Ext1.2A PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 5.2e-08 Identity = 136/202 (67.33%), Postives = 139/202 (68.81%), Query Frame = 1
BLAST of CmaCh09G011080 vs. TrEMBL
Match: A0A067LES1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25201 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 7.5e-07 Identity = 121/189 (64.02%), Postives = 126/189 (66.67%), Query Frame = 1
BLAST of CmaCh09G011080 vs. NCBI nr
Match: gi|661875154|emb|CDP20248.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11 Identity = 129/177 (72.88%), Postives = 131/177 (74.01%), Query Frame = 1
BLAST of CmaCh09G011080 vs. NCBI nr
Match: gi|976913253|gb|KVH99544.1| (Extensin repeat-containing protein [Cynara cardunculus var. scolymus]) HSP 1 Score: 68.2 bits (165), Expect = 2.0e-08 Identity = 140/236 (59.32%), Postives = 150/236 (63.56%), Query Frame = 1
BLAST of CmaCh09G011080 vs. NCBI nr
Match: gi|698524602|ref|XP_009759106.1| (PREDICTED: extensin-2 [Nicotiana sylvestris]) HSP 1 Score: 66.2 bits (160), Expect = 7.4e-08 Identity = 136/202 (67.33%), Postives = 139/202 (68.81%), Query Frame = 1
BLAST of CmaCh09G011080 vs. NCBI nr
Match: gi|697099884|ref|XP_009588436.1| (PREDICTED: extensin-2 [Nicotiana tomentosiformis]) HSP 1 Score: 65.1 bits (157), Expect = 1.7e-07 Identity = 132/186 (70.97%), Postives = 134/186 (72.04%), Query Frame = 1
BLAST of CmaCh09G011080 vs. NCBI nr
Match: gi|643736744|gb|KDP43015.1| (hypothetical protein JCGZ_25201 [Jatropha curcas]) HSP 1 Score: 62.4 bits (150), Expect = 1.1e-06 Identity = 121/189 (64.02%), Postives = 126/189 (66.67%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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