CmaCh09G010980 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G010980
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionLuminal-binding protein 2
LocationCma_Chr09 : 6009895 .. 6012453 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTGCCGACCCATCAATTCTGGATCAGTCTAAAAATTACATGGGTAAGGACTCTGTGATTGTAGGAAACGGTGCATCCCTACCCATTACCCACATCGGTACTCTTTCTCCTGTTCCAAATATTCACTTATTAGATGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATTTTTTTGGGTTATAGTTCTGTTCATAAAGGGTTCCGCTGTCTTGATCCCGCCACCACTAAGCTATATATCACCTGCCATGCTCAATTTGATGAAACTCACTTTCCTGCTATCCCTAGCTCCCAAGCCCAACCTCTTTACACTATTCCTATTTCAAATTTCTTGGAACCACATCTTCATCATATTGATTCATCCCCCCCTACCACTTCATCACCGCACATTCCTCAATCCAGTTCATCCCCGTGTGATATTTGTTCTGACCTTGTAGATGAGTCTGTGCAGGTTGATACTTCTCTTGCAGGTTCCACTTTGCCACCCTCGACTTCTAATTCAACCTCTATTGAACCTCCTGTTGATTTCTCTTCTTTGGGCACTCATCCTATGATCACACGAGCCAAAGCTGGTATATTCAAGACTCGTCATCCAGCAAATCTTGGTATGTTGGGCTCATCTGGACTTCTCTCTGCTCTTCTTGCATCCACTGAGCCAAAAGGATTCAAATCTGCGGCTAAGAATCCTGCTTGGGTGGCTGCCATGGATGAAGAAATTCGAGCGTTACAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCATATTAAATATTTGCCCGATGGATCCGTCGAGCGTTTCAAGGCTCGTCTCGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCGGTTGTCAAAGCTACCACTGTCCGTGTTGTGCTTTCTATTGCAGTCACAAATAAATGGCCTCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACACTTATTGAACGTGTTCATATGGAACAACCTCCTGGGTATGTTGATCCTCGATGTCCTATGCATGTTTGTCTATTAAAGAAAGCTCTCTATGGCTTAAAGCAAGCTCCTCGTGCTTGGTTTCAGCGTTTTAGCTCATTTCTTCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACACTCCACTTTGGTCTTATCTTTCGTCCATCCACTGTTCCTAGTACGCTAGTCGCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGATACTCGTCGCTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTCATTTCTTGGAGTGCCAAAAAGCAACCTACTGTATCACGCTCCAGCTGTGAATCTGAGTATCGTGCTCTTGCCACAACTGCTGCTGAACTTCTTTGGGTTACGCATCTTTTGCATGACCTCAAGGTCCCTATTTCACAGCAGCCCTTACTCTTATGTGACAACAAAAGTGCTATTTTTTTTAGCTCTAATCCTGTTTCTCACAAGCGGGCCAAGCATGTTGAACTAGATTATCATTTCCTTCGAGAACTTGTTATCGCTGGCAAACTTCGTACACAATATGTACCCTCTCATCTCCAAGTTGCTGACATCTTCACAAAGAGTATTTCTCGACCTCTCTTTGAATTTTTCAGATCCAAGCTTCATGTTCGTTCAAATCCGACGCTCAGCTTGCGGGGGGGTGTTAAGGATAGTTGA

mRNA sequence

ATGACTGCCGACCCATCAATTCTGGATCAGTCTAAAAATTACATGGGTAAGGACTCTGTGATTGTAGGAAACGGTGCATCCCTACCCATTACCCACATCGGGTTCCGCTGTCTTGATCCCGCCACCACTAAGCTATATATCACCTGCCATGCTCAATTTGATGAAACTCACTTTCCTGCTATCCCTAGCTCCCAAGCCCAACCTCTTTACACTATTCCTATTTCAAATTTCTTGGAACCACATCTTCATCATATTGATTCATCCCCCCCTACCACTTCATCACCGCACATTCCTCAATCCAGTTCATCCCCGTGTGATATTTGTTCTGACCTTGTAGATGAGTCTGTGCAGGTTGATACTTCTCTTGCAGGTTCCACTTTGCCACCCTCGACTTCTAATTCAACCTCTATTGAACCTCCTGTTGATTTCTCTTCTTTGGGCACTCATCCTATGATCACACGAGCCAAAGCTGGTATATTCAAGACTCGTCATCCAGCAAATCTTGGTATGTTGGGCTCATCTGGACTTCTCTCTGCTCTTCTTGCATCCACTGAGCCAAAAGGATTCAAATCTGCGGCTAAGAATCCTGCTTGGGTGGCTGCCATGGATGAAGAAATTCGAGCGTTACAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCATATTAAATATTTGCCCGATGGATCCGTCGAGCGTTTCAAGGCTCGTCTCGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCGGTTGTCAAAGCTACCACTGTCCGTGTTGTGCTTTCTATTGCAGTCACAAATAAATGGCCTCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACACTTATTGAACGTGTTCATATGGAACAACCTCCTGGTACGCTAGTCGCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGATACTCGTCGCTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTCATTTCTTGGAGTGCCAAAAAGCAACCTACTGTATCACGCTCCAGCTGTGAATCTGAGTATCGTGCTCTTGCCACAACTGCTGCTGAACTTCTTTGGGTTACGCATCTTTTGCATGACCTCAAGGTCCCTATTTCACAGCAGCCCTTACTCTTATGTGACAACAAAAGTGCTATTTTTTTTAGCTCTAATCCTGTTTCTCACAAGCGGGCCAAGCATGTTGAACTAGATTATCATTTCCTTCGAGAACTTGTTATCGCTGGCAAACTTCGTACACAATATGTACCCTCTCATCTCCAAGTTGCTGACATCTTCACAAAGAGTATTTCTCGACCTCTCTTTGAATTTTTCAGATCCAAGCTTCATGTTCGTTCAAATCCGACGCTCAGCTTGCGGGGGGGTGTTAAGGATAGTTGA

Coding sequence (CDS)

ATGACTGCCGACCCATCAATTCTGGATCAGTCTAAAAATTACATGGGTAAGGACTCTGTGATTGTAGGAAACGGTGCATCCCTACCCATTACCCACATCGGGTTCCGCTGTCTTGATCCCGCCACCACTAAGCTATATATCACCTGCCATGCTCAATTTGATGAAACTCACTTTCCTGCTATCCCTAGCTCCCAAGCCCAACCTCTTTACACTATTCCTATTTCAAATTTCTTGGAACCACATCTTCATCATATTGATTCATCCCCCCCTACCACTTCATCACCGCACATTCCTCAATCCAGTTCATCCCCGTGTGATATTTGTTCTGACCTTGTAGATGAGTCTGTGCAGGTTGATACTTCTCTTGCAGGTTCCACTTTGCCACCCTCGACTTCTAATTCAACCTCTATTGAACCTCCTGTTGATTTCTCTTCTTTGGGCACTCATCCTATGATCACACGAGCCAAAGCTGGTATATTCAAGACTCGTCATCCAGCAAATCTTGGTATGTTGGGCTCATCTGGACTTCTCTCTGCTCTTCTTGCATCCACTGAGCCAAAAGGATTCAAATCTGCGGCTAAGAATCCTGCTTGGGTGGCTGCCATGGATGAAGAAATTCGAGCGTTACAACAAAATGATACTTGGACTTTGGTTCCTCGCCCTGCCAACACCAACATCGTGGGCTCTAAATGGGTGTTTCATATTAAATATTTGCCCGATGGATCCGTCGAGCGTTTCAAGGCTCGTCTCGTTGCCAAAGGTTATACTCAGGTTCCTGGTCTTGACTACACTGACACTTTCAGTCCGGTTGTCAAAGCTACCACTGTCCGTGTTGTGCTTTCTATTGCAGTCACAAATAAATGGCCTCTTCGACAACTTGATGTCAAGAATGCTTTTCTCAATGGAACACTTATTGAACGTGTTCATATGGAACAACCTCCTGGTACGCTAGTCGCTTATTCGGATGCTGACTGGGCTGGTTGTCCCGATACTCGTCGCTCTACATCCGGCTATTCTATTTATCTTGGTAACAATCTCATTTCTTGGAGTGCCAAAAAGCAACCTACTGTATCACGCTCCAGCTGTGAATCTGAGTATCGTGCTCTTGCCACAACTGCTGCTGAACTTCTTTGGGTTACGCATCTTTTGCATGACCTCAAGGTCCCTATTTCACAGCAGCCCTTACTCTTATGTGACAACAAAAGTGCTATTTTTTTTAGCTCTAATCCTGTTTCTCACAAGCGGGCCAAGCATGTTGAACTAGATTATCATTTCCTTCGAGAACTTGTTATCGCTGGCAAACTTCGTACACAATATGTACCCTCTCATCTCCAAGTTGCTGACATCTTCACAAAGAGTATTTCTCGACCTCTCTTTGAATTTTTCAGATCCAAGCTTCATGTTCGTTCAAATCCGACGCTCAGCTTGCGGGGGGGTGTTAAGGATAGTTGA

Protein sequence

MTADPSILDQSKNYMGKDSVIVGNGASLPITHIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPPTTSSPHIPQSSSSPCDICSDLVDESVQVDTSLAGSTLPPSTSNSTSIEPPVDFSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPGTLVAYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTVSRSSCESEYRALATTAAELLWVTHLLHDLKVPISQQPLLLCDNKSAIFFSSNPVSHKRAKHVELDYHFLRELVIAGKLRTQYVPSHLQVADIFTKSISRPLFEFFRSKLHVRSNPTLSLRGGVKDS
Homology
[Close]
BLAST of CmaCh09G010980 vs. Swiss-Prot
Match: COPIA_DROME (Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3)

HSP 1 Score: 120.9 bits (302), Expect = 3.7e-26
Identity = 55/119 (46.22%), Postives = 81/119 (68.07%), Query Frame = 1 

Query: 197  AWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYT 256
            +W  A++ E+ A + N+TWT+  RP N NIV S+WVF +KY   G+  R+KARLVA+G+T
Sbjct: 905  SWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFT 964

Query: 257  QVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG 316
            Q   +DY +TF+PV + ++ R +LS+ +     + Q+DVK AFLNGTL E ++M  P G
Sbjct: 965  QKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQG 1023

[Close]
BLAST of CmaCh09G010980 vs. Swiss-Prot
Match: M820_ARATH (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 4.1e-25
Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 1 

Query: 151 MITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQ 210
           M+TR+KAGI K     +L +  +           EPK    A K+P W  AM EE+ AL 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTT--------IKKEPKSVIFALKDPGWCQAMQEELDALS 60

Query: 211 QNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPV 270
           +N TW LVP P N NI+G KWVF  K   DG+++R KARLVAKG+ Q  G+ + +T+SPV
Sbjct: 61  RNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPV 120

Query: 271 VKATTVRVVLSIA 284
           V+  T+R +L++A
Sbjct: 121 VRTATIRTILNVA 125

[Close]
BLAST of CmaCh09G010980 vs. Swiss-Prot
Match: POLX_TOBAC (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-24
Identity = 61/138 (44.20%), Postives = 85/138 (61.59%), Query Frame = 1 

Query: 185 EPKGFKSAAKNPA---WVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDG 244
           EP+  K    +P     + AM EE+ +LQ+N T+ LV  P     +  KWVF +K   D 
Sbjct: 810 EPESLKEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDC 869

Query: 245 SVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLN 304
            + R+KARLV KG+ Q  G+D+ + FSPVVK T++R +LS+A +    + QLDVK AFL+
Sbjct: 870 KLVRYKARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLH 929

Query: 305 GTLIERVHMEQPPGTLVA 320
           G L E ++MEQP G  VA
Sbjct: 930 GDLEEEIYMEQPEGFEVA 947

[Close]
BLAST of CmaCh09G010980 vs. Swiss-Prot
Match: M810_ARATH (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 5.8e-19
Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 1 

Query: 299 FLNGTLIERVHMEQPPGTLV-AYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTV 358
           ++ GT+   +++ +     V A+ D+DWAGC  TRRST+G+  +LG N+ISWSAK+QPTV
Sbjct: 145 YVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTV 204

Query: 359 SRSSCESEYRALATTAAELLW 379
           SRSS E+EYRALA TAAEL W
Sbjct: 205 SRSSTETEYRALALTAAELTW 225

[Close]
BLAST of CmaCh09G010980 vs. TrEMBL
Match: A5AKX4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015518 PE=4 SV=1)

HSP 1 Score: 472.6 bits (1215), Expect = 5.6e-130
Identity = 238/288 (82.64%), Postives = 257/288 (89.24%), Query Frame = 1 

Query: 31  THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPP 90
           +H GFRCLDP T++LYIT HAQFDETHFP +PSSQAQPL ++ ISNFLEP LHHID SPP
Sbjct: 666 SHKGFRCLDPTTSRLYITRHAQFDETHFPTVPSSQAQPLSSLHISNFLEPRLHHIDPSPP 725

Query: 91  TTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLPPSTSNSTSIEPPVDFS-SLG 150
           +  SP  HIP+S+SSPC+ICSDLVDESVQVDTSLAGS+LPP  S+  SIE   D S SLG
Sbjct: 726 SPPSPSSHIPRSNSSPCNICSDLVDESVQVDTSLAGSSLPPLASSPHSIEHAADSSSSLG 785

Query: 151 THPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIR 210
           +HPMITRAKAGIFKTRHPANLG+LGSSGLL ALLASTEPKGFKSAAKNPAW+AAMDEE++
Sbjct: 786 SHPMITRAKAGIFKTRHPANLGVLGSSGLLXALLASTEPKGFKSAAKNPAWLAAMDEEVQ 845

Query: 211 ALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTF 270
           ALQQN TW LVPRP NTNIVGSKWVF  KYLPDGSVER KARLVAKGYT VPGLDYTDTF
Sbjct: 846 ALQQNGTWILVPRPVNTNIVGSKWVFRTKYLPDGSVERLKARLVAKGYTXVPGLDYTDTF 905

Query: 271 SPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG 316
           SPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLNGTL E V+MEQPPG
Sbjct: 906 SPVVKATTVRVVLSLAVTNKWPLRQLDVKNAFLNGTLTEHVYMEQPPG 953

[Close]
BLAST of CmaCh09G010980 vs. TrEMBL
Match: A5B2A6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009561 PE=4 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 1.0e-99
Identity = 200/288 (69.44%), Postives = 218/288 (75.69%), Query Frame = 1 

Query: 31  THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPP 90
           +H GFRCL+P T++LYIT HAQFDETHFP +PSSQAQPL ++ ISNFLEP LHHID SPP
Sbjct: 607 SHKGFRCLEPTTSRLYITRHAQFDETHFPTVPSSQAQPLSSLHISNFLEPRLHHIDPSPP 666

Query: 91  --TTSSPHIPQSSSSPCDICSDLVDESVQVDTSLAGSTLPPSTSNSTSIEPPVDFS-SLG 150
             T  SPHIP+S+SSPC                   S+LPP  S+  SIE  VD S SLG
Sbjct: 667 SXTFPSPHIPRSNSSPC-------------------SSLPPLASSPHSIELDVDSSSSLG 726

Query: 151 THPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIR 210
           +HPMITRAKAGIFKTRHP NLG+LG SGLLSA LASTEPKGFKSAAKNP W+AAMDEE++
Sbjct: 727 SHPMITRAKAGIFKTRHPVNLGVLGFSGLLSAFLASTEPKGFKSAAKNPTWLAAMDEEVQ 786

Query: 211 ALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTF 270
           ALQQN TW LV RP NTNI                  R KARLVAKGYTQV GLDYTDTF
Sbjct: 787 ALQQNGTWILVSRPVNTNI------------------RLKARLVAKGYTQVLGLDYTDTF 846

Query: 271 SPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG 316
           SPVVKATTVRVVLS+AVTNKWPLRQLDVKN FLNGTL E V+MEQPPG
Sbjct: 847 SPVVKATTVRVVLSLAVTNKWPLRQLDVKNTFLNGTLTEHVYMEQPPG 857

[Close]
BLAST of CmaCh09G010980 vs. TrEMBL
Match: A5C5R8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032383 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.3e-86
Identity = 165/195 (84.62%), Postives = 175/195 (89.74%), Query Frame = 1 

Query: 122 LAGSTLPPSTSNSTSIEPPVDFS-SLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSAL 181
           L G +LPP  S+  SIE   D S SLG+HPMITRAKAGIFKTRHPANLG+LGSSGLLSAL
Sbjct: 642 LTGFSLPPLASSPHSIEHAADSSSSLGSHPMITRAKAGIFKTRHPANLGVLGSSGLLSAL 701

Query: 182 LASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPD 241
           L+STEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NTNIVGSKWVF  KY PD
Sbjct: 702 LSSTEPKGFKSAAKNPAWLAAMDEEVQALQQNGTWILVPRPVNTNIVGSKWVFRTKYFPD 761

Query: 242 GSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFL 301
           GSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFL
Sbjct: 762 GSVERLKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNAFL 821

Query: 302 NGTLIERVHMEQPPG 316
           NGTL E V+MEQPPG
Sbjct: 822 NGTLTEHVYMEQPPG 836

[Close]
BLAST of CmaCh09G010980 vs. TrEMBL
Match: A5B6R5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036280 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 3.6e-84
Identity = 175/300 (58.33%), Postives = 217/300 (72.33%), Query Frame = 1 

Query: 31  THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPP 90
           +H GFRC D  T++ YIT HA+FDE  FP   +S A  +  I +SNF EP    ++ SP 
Sbjct: 110 SHKGFRCFDTTTSRTYITRHARFDEHFFPFSNTSSATSIADIGLSNFFEPCA--LEPSPS 169

Query: 91  TTSSPHIPQSSSSPCDICSD-LVDESVQVDTSLAGST-----LPPSTSNSTSIEP---PV 150
           T+S        S PC  C+D    E +QV +S   ST     + P  +++T++ P   P+
Sbjct: 170 TSSPTTTRVPPSPPCHFCADDFAVEPLQVSSSAPESTSSSAAVSPVPASATTLVPFAAPM 229

Query: 151 D------FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKN 210
           D       ++  +HPMITRAK+GIFK RHPA+L  + SS L+ ALLA++EPKGFKSAAKN
Sbjct: 230 DPIHTTTSAAPASHPMITRAKSGIFKPRHPAHLSFVQSSPLIHALLATSEPKGFKSAAKN 289

Query: 211 PAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGY 270
           PAW+AAMD++I+ALQ N TW LVPRP+NTNIVGSKWVF  K+L  GS+ERFKARLVAKGY
Sbjct: 290 PAWLAAMDDKIKALQTNHTWDLVPRPSNTNIVGSKWVFRTKFLSYGSIERFKARLVAKGY 349

Query: 271 TQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG 316
           TQ+PGLDY DTFSPVVKA+TVRVVLS+AV++KWPLRQLDVKNAFLNG L E V+MEQP G
Sbjct: 350 TQLPGLDYKDTFSPVVKASTVRVVLSLAVSHKWPLRQLDVKNAFLNGILHETVYMEQPLG 407

[Close]
BLAST of CmaCh09G010980 vs. TrEMBL
Match: A5AIQ8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028253 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.9e-77
Identity = 160/239 (66.95%), Postives = 181/239 (75.73%), Query Frame = 1 

Query: 80  PHLHHIDSSPPTTSSPHIPQSSSSPCDICSDLVDESVQVDTSLAG---STLPPSTSNSTS 139
           PH+  +  SP   SSP  P S S+ C I  D VD+S+Q   SLAG   S+L P      S
Sbjct: 2   PHIDPLLMSPLHYSSPITP-SGSNLCVIFPDPVDKSLQATDSLAGPSSSSLEPHPPLVAS 61

Query: 140 IEPPVDFSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNP 199
              P     LG+HPM+TRAKA IFKT HPANL +L SSG LS LLASTEPKGFKSAAKNP
Sbjct: 62  DIAPTPAPPLGSHPMLTRAKASIFKTHHPANLSVLSSSGFLSVLLASTEPKGFKSAAKNP 121

Query: 200 AWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYT 259
           AW+A+MDEE++ALQ N TW LVPRPA+TNIVG KWVF  KYL DGS++ FKA LVAKGYT
Sbjct: 122 AWLASMDEEVQALQHNRTWVLVPRPAHTNIVGXKWVFRTKYLLDGSIDCFKAHLVAKGYT 181

Query: 260 QVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG 316
           QVPGLDY DTFSPV+KATTV VVLS+ VTN+WPLRQLDVKNAFLNGTL E V++EQP G
Sbjct: 182 QVPGLDYIDTFSPVIKATTVHVVLSLXVTNRWPLRQLDVKNAFLNGTLTENVYIEQPXG 239

[Close]
BLAST of CmaCh09G010980 vs. TAIR10
Match: AT4G23160.1 (AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8)

HSP 1 Score: 143.7 bits (361), Expect = 3.0e-34
Identity = 66/147 (44.90%), Postives = 94/147 (63.95%), Query Frame = 1 

Query: 177 LSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIK 236
           L  +  + EP  +  A +   W  AMD+EI A++   TW +   P N   +G KWV+ IK
Sbjct: 77  LVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIK 136

Query: 237 YLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVK 296
           Y  DG++ER+KARLVAKGYTQ  G+D+ +TFSPV K T+V+++L+I+    + L QLD+ 
Sbjct: 137 YNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDIS 196

Query: 297 NAFLNGTLIERVHMEQPPGTLVAYSDA 324
           NAFLNG L E ++M+ PPG      D+
Sbjct: 197 NAFLNGDLDEEIYMKLPPGYAARQGDS 223

[Close]
BLAST of CmaCh09G010980 vs. TAIR10
Match: ATMG00820.1 (ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase))

HSP 1 Score: 117.5 bits (293), Expect = 2.3e-26
Identity = 60/133 (45.11%), Postives = 82/133 (61.65%), Query Frame = 1 

Query: 151 MITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIRALQ 210
           M+TR+KAGI K     +L +  +           EPK    A K+P W  AM EE+ AL 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTT--------IKKEPKSVIFALKDPGWCQAMQEELDALS 60

Query: 211 QNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTFSPV 270
           +N TW LVP P N NI+G KWVF  K   DG+++R KARLVAKG+ Q  G+ + +T+SPV
Sbjct: 61  RNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPV 120

Query: 271 VKATTVRVVLSIA 284
           V+  T+R +L++A
Sbjct: 121 VRTATIRTILNVA 125

[Close]
BLAST of CmaCh09G010980 vs. TAIR10
Match: ATMG00810.1 (ATMG00810.1 DNA/RNA polymerases superfamily protein)

HSP 1 Score: 97.1 bits (240), Expect = 3.3e-20
Identity = 46/81 (56.79%), Postives = 61/81 (75.31%), Query Frame = 1 

Query: 299 FLNGTLIERVHMEQPPGTLV-AYSDADWAGCPDTRRSTSGYSIYLGNNLISWSAKKQPTV 358
           ++ GT+   +++ +     V A+ D+DWAGC  TRRST+G+  +LG N+ISWSAK+QPTV
Sbjct: 145 YVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTV 204

Query: 359 SRSSCESEYRALATTAAELLW 379
           SRSS E+EYRALA TAAEL W
Sbjct: 205 SRSSTETEYRALALTAAELTW 225

[Close]
BLAST of CmaCh09G010980 vs. NCBI nr
Match: gi|147794811|emb|CAN78022.1| (hypothetical protein VITISV_015518 [Vitis vinifera])

HSP 1 Score: 472.6 bits (1215), Expect = 8.1e-130
Identity = 238/288 (82.64%), Postives = 257/288 (89.24%), Query Frame = 1 

Query: 31  THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPP 90
           +H GFRCLDP T++LYIT HAQFDETHFP +PSSQAQPL ++ ISNFLEP LHHID SPP
Sbjct: 666 SHKGFRCLDPTTSRLYITRHAQFDETHFPTVPSSQAQPLSSLHISNFLEPRLHHIDPSPP 725

Query: 91  TTSSP--HIPQSSSSPCDICSDLVDESVQVDTSLAGSTLPPSTSNSTSIEPPVDFS-SLG 150
           +  SP  HIP+S+SSPC+ICSDLVDESVQVDTSLAGS+LPP  S+  SIE   D S SLG
Sbjct: 726 SPPSPSSHIPRSNSSPCNICSDLVDESVQVDTSLAGSSLPPLASSPHSIEHAADSSSSLG 785

Query: 151 THPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIR 210
           +HPMITRAKAGIFKTRHPANLG+LGSSGLL ALLASTEPKGFKSAAKNPAW+AAMDEE++
Sbjct: 786 SHPMITRAKAGIFKTRHPANLGVLGSSGLLXALLASTEPKGFKSAAKNPAWLAAMDEEVQ 845

Query: 211 ALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTF 270
           ALQQN TW LVPRP NTNIVGSKWVF  KYLPDGSVER KARLVAKGYT VPGLDYTDTF
Sbjct: 846 ALQQNGTWILVPRPVNTNIVGSKWVFRTKYLPDGSVERLKARLVAKGYTXVPGLDYTDTF 905

Query: 271 SPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG 316
           SPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFLNGTL E V+MEQPPG
Sbjct: 906 SPVVKATTVRVVLSLAVTNKWPLRQLDVKNAFLNGTLTEHVYMEQPPG 953

[Close]
BLAST of CmaCh09G010980 vs. NCBI nr
Match: gi|147797902|emb|CAN69607.1| (hypothetical protein VITISV_009561 [Vitis vinifera])

HSP 1 Score: 372.1 bits (954), Expect = 1.5e-99
Identity = 200/288 (69.44%), Postives = 218/288 (75.69%), Query Frame = 1 

Query: 31  THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPP 90
           +H GFRCL+P T++LYIT HAQFDETHFP +PSSQAQPL ++ ISNFLEP LHHID SPP
Sbjct: 607 SHKGFRCLEPTTSRLYITRHAQFDETHFPTVPSSQAQPLSSLHISNFLEPRLHHIDPSPP 666

Query: 91  --TTSSPHIPQSSSSPCDICSDLVDESVQVDTSLAGSTLPPSTSNSTSIEPPVDFS-SLG 150
             T  SPHIP+S+SSPC                   S+LPP  S+  SIE  VD S SLG
Sbjct: 667 SXTFPSPHIPRSNSSPC-------------------SSLPPLASSPHSIELDVDSSSSLG 726

Query: 151 THPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAMDEEIR 210
           +HPMITRAKAGIFKTRHP NLG+LG SGLLSA LASTEPKGFKSAAKNP W+AAMDEE++
Sbjct: 727 SHPMITRAKAGIFKTRHPVNLGVLGFSGLLSAFLASTEPKGFKSAAKNPTWLAAMDEEVQ 786

Query: 211 ALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLDYTDTF 270
           ALQQN TW LV RP NTNI                  R KARLVAKGYTQV GLDYTDTF
Sbjct: 787 ALQQNGTWILVSRPVNTNI------------------RLKARLVAKGYTQVLGLDYTDTF 846

Query: 271 SPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG 316
           SPVVKATTVRVVLS+AVTNKWPLRQLDVKN FLNGTL E V+MEQPPG
Sbjct: 847 SPVVKATTVRVVLSLAVTNKWPLRQLDVKNTFLNGTLTEHVYMEQPPG 857

[Close]
BLAST of CmaCh09G010980 vs. NCBI nr
Match: gi|147785835|emb|CAN73071.1| (hypothetical protein VITISV_032383 [Vitis vinifera])

HSP 1 Score: 328.6 bits (841), Expect = 1.9e-86
Identity = 165/195 (84.62%), Postives = 175/195 (89.74%), Query Frame = 1 

Query: 122 LAGSTLPPSTSNSTSIEPPVDFS-SLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSAL 181
           L G +LPP  S+  SIE   D S SLG+HPMITRAKAGIFKTRHPANLG+LGSSGLLSAL
Sbjct: 642 LTGFSLPPLASSPHSIEHAADSSSSLGSHPMITRAKAGIFKTRHPANLGVLGSSGLLSAL 701

Query: 182 LASTEPKGFKSAAKNPAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPD 241
           L+STEPKGFKSAAKNPAW+AAMDEE++ALQQN TW LVPRP NTNIVGSKWVF  KY PD
Sbjct: 702 LSSTEPKGFKSAAKNPAWLAAMDEEVQALQQNGTWILVPRPVNTNIVGSKWVFRTKYFPD 761

Query: 242 GSVERFKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFL 301
           GSVER KARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLS+AVTNKWPLRQLDVKNAFL
Sbjct: 762 GSVERLKARLVAKGYTQVPGLDYTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNAFL 821

Query: 302 NGTLIERVHMEQPPG 316
           NGTL E V+MEQPPG
Sbjct: 822 NGTLTEHVYMEQPPG 836

[Close]
BLAST of CmaCh09G010980 vs. NCBI nr
Match: gi|147788621|emb|CAN67588.1| (hypothetical protein VITISV_036280 [Vitis vinifera])

HSP 1 Score: 320.5 bits (820), Expect = 5.1e-84
Identity = 175/300 (58.33%), Postives = 217/300 (72.33%), Query Frame = 1 

Query: 31  THIGFRCLDPATTKLYITCHAQFDETHFPAIPSSQAQPLYTIPISNFLEPHLHHIDSSPP 90
           +H GFRC D  T++ YIT HA+FDE  FP   +S A  +  I +SNF EP    ++ SP 
Sbjct: 110 SHKGFRCFDTTTSRTYITRHARFDEHFFPFSNTSSATSIADIGLSNFFEPCA--LEPSPS 169

Query: 91  TTSSPHIPQSSSSPCDICSD-LVDESVQVDTSLAGST-----LPPSTSNSTSIEP---PV 150
           T+S        S PC  C+D    E +QV +S   ST     + P  +++T++ P   P+
Sbjct: 170 TSSPTTTRVPPSPPCHFCADDFAVEPLQVSSSAPESTSSSAAVSPVPASATTLVPFAAPM 229

Query: 151 D------FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKN 210
           D       ++  +HPMITRAK+GIFK RHPA+L  + SS L+ ALLA++EPKGFKSAAKN
Sbjct: 230 DPIHTTTSAAPASHPMITRAKSGIFKPRHPAHLSFVQSSPLIHALLATSEPKGFKSAAKN 289

Query: 211 PAWVAAMDEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGY 270
           PAW+AAMD++I+ALQ N TW LVPRP+NTNIVGSKWVF  K+L  GS+ERFKARLVAKGY
Sbjct: 290 PAWLAAMDDKIKALQTNHTWDLVPRPSNTNIVGSKWVFRTKFLSYGSIERFKARLVAKGY 349

Query: 271 TQVPGLDYTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG 316
           TQ+PGLDY DTFSPVVKA+TVRVVLS+AV++KWPLRQLDVKNAFLNG L E V+MEQP G
Sbjct: 350 TQLPGLDYKDTFSPVVKASTVRVVLSLAVSHKWPLRQLDVKNAFLNGILHETVYMEQPLG 407

[Close]
BLAST of CmaCh09G010980 vs. NCBI nr
Match: gi|1000954282|ref|XP_015578241.1| (PREDICTED: uncharacterized protein LOC107261699 [Ricinus communis])

HSP 1 Score: 308.9 bits (790), Expect = 1.5e-80
Identity = 157/233 (67.38%), Postives = 183/233 (78.54%), Query Frame = 1 

Query: 91  TTSSPHIPQSSSSPCDICSDLVDESVQVDTSLAGSTLPPSTSNSTSIEPPVD-------- 150
           T +S HI  + S+     +  V+ES+Q + SLAG +LPPS  +S  +E P++        
Sbjct: 147 TGASTHITPAHSTLDQSTNYTVEESLQANDSLAGPSLPPSDPSSAPLELPIEPPIPAPIA 206

Query: 151 FSSLGTHPMITRAKAGIFKTRHPANLGMLGSSGLLSALLASTEPKGFKSAAKNPAWVAAM 210
            + + +HPM+TRAKAGIFK+RHPANL +LGSS LLSALLASTEPKGFKSAAKNP W  AM
Sbjct: 207 ATLMASHPMLTRAKAGIFKSRHPANLAVLGSSSLLSALLASTEPKGFKSAAKNPTWFTAM 266

Query: 211 DEEIRALQQNDTWTLVPRPANTNIVGSKWVFHIKYLPDGSVERFKARLVAKGYTQVPGLD 270
           DEE++ALQ N TW LVPRPANTNIV SKWVF  KY PDGS+ER KARL+AKGYTQVPGLD
Sbjct: 267 DEEVQALQNNRTWILVPRPANTNIVSSKWVFRTKYFPDGSIERLKARLIAKGYTQVPGLD 326

Query: 271 YTDTFSPVVKATTVRVVLSIAVTNKWPLRQLDVKNAFLNGTLIERVHMEQPPG 316
           YTDTFSPV+KATT+RV+LS+AVTNKW LR LDVKNAF NG LIE V MEQPPG
Sbjct: 327 YTDTFSPVIKATTLRVILSLAVTNKWSLRHLDVKNAFFNGHLIESVFMEQPPG 379

The following BLAST results are available for this feature:
BLAST of CmaCh09G010980 vs. Swiss-Prot
Match NameE-valueIdentityDescription
COPIA_DROME3.7e-2646.22Copia protein OS=Drosophila melanogaster GN=GIP PE=1 SV=3[more]
M820_ARATH4.1e-2545.11Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana GN=AtMg0... [more]
POLX_TOBAC1.2e-2444.20Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
M810_ARATH5.8e-1956.79Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana GN=AtMg0... [more]
BLAST of CmaCh09G010980 vs. TrEMBL
Match NameE-valueIdentityDescription
A5AKX4_VITVI5.6e-13082.64Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_015518 PE=4 SV=1[more]
A5B2A6_VITVI1.0e-9969.44Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009561 PE=4 SV=1[more]
A5C5R8_VITVI1.3e-8684.62Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032383 PE=4 SV=1[more]
A5B6R5_VITVI3.6e-8458.33Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036280 PE=4 SV=1[more]
A5AIQ8_VITVI1.9e-7766.95Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_028253 PE=4 SV=1[more]
BLAST of CmaCh09G010980 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G23160.13.0e-3444.90 cysteine-rich RLK (RECEPTOR-like protein kinase) 8[more]
ATMG00820.12.3e-2645.11ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase)[more]
ATMG00810.13.3e-2056.79ATMG00810.1 DNA/RNA polymerases superfamily protein[more]
BLAST of CmaCh09G010980 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|147794811|emb|CAN78022.1|8.1e-13082.64hypothetical protein VITISV_015518 [Vitis vinifera][more]
gi|147797902|emb|CAN69607.1|1.5e-9969.44hypothetical protein VITISV_009561 [Vitis vinifera][more]
gi|147785835|emb|CAN73071.1|1.9e-8684.62hypothetical protein VITISV_032383 [Vitis vinifera][more]
gi|147788621|emb|CAN67588.1|5.1e-8458.33hypothetical protein VITISV_036280 [Vitis vinifera][more]
gi|1000954282|ref|XP_015578241.1|1.5e-8067.38PREDICTED: uncharacterized protein LOC107261699 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G010980.1CmaCh09G010980.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 212..318
score: 1.3
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 31..393
score: 4.9E
NoneNo IPR availablePANTHERPTHR11439:SF185SUBFAMILY NOT NAMEDcoord: 31..393
score: 4.9E
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 313..424
score: 1.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G010980Melon (DHL92) v3.6.1cmamedB027
CmaCh09G010980Silver-seed gourdcarcmaB0382
CmaCh09G010980Cucumber (Chinese Long) v3cmacucB0053
CmaCh09G010980Watermelon (97103) v2cmawmbB049
CmaCh09G010980Wax gourdcmawgoB0031
CmaCh09G010980Wax gourdcmawgoB0043
CmaCh09G010980Cucurbita maxima (Rimu)cmacmaB052
CmaCh09G010980Cucumber (Gy14) v1cgycmaB0133
CmaCh09G010980Cucurbita moschata (Rifu)cmacmoB048
CmaCh09G010980Cucurbita moschata (Rifu)cmacmoB027
CmaCh09G010980Wild cucumber (PI 183967)cmacpiB045
CmaCh09G010980Cucumber (Chinese Long) v2cmacuB043
CmaCh09G010980Melon (DHL92) v3.5.1cmameB019
CmaCh09G010980Watermelon (Charleston Gray)cmawcgB008
CmaCh09G010980Watermelon (97103) v1cmawmB010
CmaCh09G010980Cucurbita pepo (Zucchini)cmacpeB046
CmaCh09G010980Cucurbita pepo (Zucchini)cmacpeB060
CmaCh09G010980Bottle gourd (USVL1VR-Ls)cmalsiB019
CmaCh09G010980Cucumber (Gy14) v2cgybcmaB887