CmaCh09G007360 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G007360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	RNA-binding protein with serine-rich domain 1-A
Location	Cma_Chr09 : 3500142 .. 3507709 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCGACCATTTCTGTGTCGCTTTTCTCTTCAATATCTCTAAATCTCAAACGAAACGGGTTTAAGTTAGGGTTTCAAATTTCGCTCTGCAGCTATTGCCGGCCATGGCTAAACCAAGCAGAGGCCGTCGTTCGCCGCCGTCGGGTTCGGGATCCTCCTCACGTTCCCGCTCATACTCCGGCTCTGGTTCCCGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCATCTGTGTCCCGCTCCCGCTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTATCACGAAGCGGTACTTCTCGAAGCCGAAGCCCCGCTCCTCAAAGAAAGAGGTTTGTCTTTCTTTTGAGCTTGCATTTTTCGTTCTGAGGTCTTGCATTTGGTGCTTATTGGTTGTCAGTGTGAGAGGAAGTATCGGAATTAGGTATTCTATGCTTGGGAGGTCGGTCGATTATGCATTTTCTTTTTTGTCGCTGTTGATTGGTTTTTCTTATATTTATTCGAAGGCATGTTTTGGAATCATTACGTTATCGAGAAACAGACGCGCTCCATATACCAAAAACAGTTTTTATGCGGTCATTGTATATCGCAATCACATCTTCATTTGTTTTTCAGTCCGAATGAAACAGCTCGGCGGACTCGCGCTTCATCTCCACTAGCTAAACGAATTTCTCCGCCACCCAGGTAATAATACCTCGTCTACAGTTAAATCCAACTTCTCATTTTTTATCATCTTATTGACATTTAAGCTCTTCATTATTTGTTCATGGCATGCATTTTCCGATAAGCTTCTTACATTTTTACTTTGGCGCGGTTTTTTATCCCGGCCTTTTGTTAAAGACTGCTTCCGAGCCTCTTCAATGGTTGTTTTTCTGCTGTTTGTTTAGTAAGTTACAAATTATGGATGACTAGGGAGCAATTTCGCTTTCAAAAGAAGGTCAAAGTTTAAACCAAAGGAGTTGAAAGAATCCAATTGGTCAAAAGTGTAGAGAGACCATAAGATTTATAAAGGAAGTGCATTTACACAAAGACGTTGTTTGGAAGATAATTTGCTTAAAATAATGATCAAAAGTGTTGTACTTGTCTTGAAAGAGATTATGGTTACGTTCATTCCATGTTGTCCACAAAAAAATCCGAAATGCATCCAAAGAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCTCCCAAAAGAAAAATGTAACCTTCTTTGGATGGAAATCTGTCCATATCTCCTCAAAGAGAATGCGGATCTGTTTCGAACAAACTGAAAAACAAAGAAGATAAGATTTTGATGTATTTACCTCTTAAAAATCTGTCCATACTGTTTTTTGAACTTAAATATGGTTTAATATATTATTTTTTATTTTATTCTAAGAAGCTCATTCTTCCTTATCATTTAGTCAGTTAAAACATGGTTTGATTTAAATTCCTTGACTATTTATCCAAGCATTAAAAAAATCTTCAAATTCAATACTTTTTCAGAACTGTGGTGTTACTAGTTCATTATTTTCAACTTTTAATCATTTTTTGCCCTTGTTGAACTTAAATGTGATAAAGAATGTTCTATTAGCTTTAATTGTCTTACAACTAAATTTTATCTTAGTAATCTATAATCACTTACAAATGTATATGTAATTGACTATTTAAAAGCTGACATTTGCATTTTTTTAATACCAATATTTTCTTTATTTCTGCATCTGTATTATCAGCGATTTACATATGATGCTTTCATTTTGTGATAATTTCCTTGCCTGTCAGTTGTATTTATATAATTTGCTTATCACGCTGTCAATTGATTTCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATTGATCCACTGAGTAGGAATGTCCATGAGGGTCATTTAAAAGAAATCTTCAGTATGTTTTTTCACTCACTTTATTTAGCATTTAAACAATTATTCTGTTGGATAAATGCACTTATTTCTTCAGATTGTTCTTTTTTTAAAAGTTACAAGTAAAATTCATCAATTAAAACCGAAGAGTAAGACAAAAGAAAATCTTATTTCAACCTTCAATCACATTATGTGAAAGATACAACACTTTGACTTCATGAACCTAGTATTTTGTCTTACAAAAAAAGACTTTGTGTAAACGTATGTATTTATGTATTAGATTCAATTCAACCTAGCCTGTTTATTGGTAATGATCATTGACCGTGTTGTTTTGTCCTCAACAATTGAGTAATTTGTCTTATCAATTACTCTTCATCAGTGCATGCTCATTCCTTCCTTTCCTCTCGACTGTTTTGAAATTATAGACAGTTCCTTTTCATGAAATTTTTTTATCCTCATTCAATTGAAGTGATCCCCTTAAATATGATTTTTCCTCCAAAAGTCTCTATCTATTTAGTTAGGGTTGATGATATTGGATTGAATAGGTAATTTGTTATTTTATAAAAACATTGTAACTCTTATGAATTTCCTTTTTTTTTTTTTTTTTTTTTGATACCCTTTAGGTAATTTTGGTGAAGTAGTCCATGTTGAGCTGGCAATGGATCGCACAGTGAGTCCTTACCATGCATATTGTATTTGAAGAACTTTTTCTTGAATAATATATTGATGCATCTGTTTTAATATTTACAGGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACAAGACCTGATGCTGAAAAAGCCCAATTGCATATGGATGGTGTATGTTTTTCTTAAATGTTCAAGTACTTGAAGTACATCTATTGATAATTTCTCATAACTGGGAAATGATTGTGATGGTTGGCTGAATGTAGGCCCAAATTGATGGGAATGTTATTCGAACAAGATTTACATTGCCTCAAAGACAGAAGATCCCAACACCTCCAAGGACTGTAGCAACCGCTTCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTGCTGATGCTGAGAAGAATGACATGAAAAGACAGAGAGAACGTATAACTCTCAATTATTATATATTTTTCCATGTTCAACTGTTTTTGCCTATTATTCTATTCTATTTTTCATGAGGATATATTATTTTAGTGATTTATGTCTGCTTTGTCACGTCAGCTTCACCTCGTCGAAAGCCTCCTTCTCCTAGAAGACGCTCGCCTATTGCTCGACGAGGTGGGTCTCCTAGAAGACAACCCGATTCTCCTCGCCGCCGTCCAGAGTCTCCTCCGCGTCGCCGCTTAGAATCTCCCCCTAGAAGGAGGCCTGCATCACCCATGAGAGGTGGCCGTTCTCCATCGCCTTTGGCAAGGCGACATAGATCTCCTCCAAGGTTGACCATCATCCCCCCACTCTTCAACCCCCCAGCCTCACACATACACAATCTATCTCCTTTCCTGTAAATAGTGGGAGCATTAACATTGTTTAACTTCGGTTGAATAGGCCCTCTCCAAGAAGAATTCGTGACAGTCCTGTTCGAAGACGTTCACCACCCCCTCCTAGGCGCCGGTATTACACATTTGACTGTTCTGAGATATCATAGTATTTTTTCTTGCAGTTTATTTGAATGGTACACGGACATGTTTATTGTTTCTAACTTCACAAATCTTCATATAATGACAAGGTGAACTATTTATGACTTACTGCACGTGTTAAGTTTAATCGTATTGTTTCTGAGTTATAGAGTAAATGTCTGGAGATTAGTGAATTATGCAGGAGCATATGTTAATATCAATTTTTATTTTGAGCTTTTGTTTTTAGAGTGTGTTTCTTTTATTTTTAGATTTCCAGCTACATCAGGTATTTTGTAGAAGAATAAAAATTGCATCAGGTTTTGTTTAGTTGTGCGGTTTTTGTTTGCCATTGATCATTTTGTTATGCCTAGACACAGGTAACTGTGGTTTTTGGGTGATCCGAGCAAATTCAAAATAATGCTATTTCAGACTTAGAATTAAGTAGCAACCTGAGTTACTCTTGATGTAACTATTTAAAACTCTACTTGCTTCCATTATGGTACAAAGGTGTTCCTGTAGTTTAATCTTAGGCATTAGAAGAATGGTGACTGGTGACTGAGAAATTTAAGCATTTAAGCATATGGCAGTGGGAGCTTTTAATTGCTTGTTCACTATGGTTGACCCATGGTTTTTACTTGAAAATGATGTAGTCTGACTCAGTGGTCTCAGTTATGTTTTTGCTTAGGTATATGAGCGTTACTTAACTAAATTGTGTTTCTTTCAGTACACCGCCTCGACGTGCTCGTAGTCCTCCAAGAAGGTCTCCAGTAGTTCGCAGAAAGAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATCTTCACCACGGAGGTAACTTGATGCCTAATGTTTTTTTTTTTTTTTTTGTCATGACCAACTGCCTTTAAAGAAAAAGATATTAGTATCTATGGATGCCTAATGAACTTTTTTTCATGATCAACTCCCTTTTAAAGAAAAATGATTTCATATTGTTTGCTTGTCCACTCTGTTTGTGGTGCATAAATTAAATGATGAAGTAGACACAGAAGTCCCTACCATTGGCATCGATCAAGAAAGGATAATAGTCATAATAAACCCATTCTGAACAGCCCCAAGTGAGGGCTATGAAACAAGTTCAAGATTCTCATCTTCTTTTCAATTGCAGTTTATTTGAAGCAAACTTAGACAGATGTCTGGTGTTGTGGTCTTGGGATTTTATATTACAACAGTCCTTCGAAACTAAGCTTAAACGATCTCAAGTTCCTATTTCTTACCTGAAACTTTGTATAGGAAATAATAATCTCCAAATTCCCCAAAAATGTATGTGCGTAATTGCCTATTAGTGGATAACACTTGTTTTGTATAGTTAGCTTTTAGAAAGGATGCGAATAATGTGCATCTGTAGTCATATTGCATGTTCCATTTGTAGGGATTTTGGTGTGAGAAGTCTTCTTCAATGGCTGGAAAGATCTTATTGTATTGTTTGGTCCGTTGTTAAATTCTATGTTTCTCTTTGAACTTTGGCTACTTGGTCAATTTGTAATAACTCGCTAGATCATATTTTATTGGAGTGAGACCCCTTTTTGTAGCTTGTTGCTTGCTTCATATTTCTTCTGGCCTTTTGTTTTGTATGTCCGTGTATTCTTATGGTTCTCTCTATACAGAGGTCAGCCTGCAGCCGCTGGTAGACGTGGGAGATCATCGTCCTACTCTGCATCACCTAGTCCACGCAAGGTTTGCTGTGATTGATCTTGCCATTTTTTTACCGCTCTGGGTTTATTATTGTTCGTTCTTCCTTGCATCCCGAGTGCCTTCATTGTTCTCTATTTTATATTACAGGTGCCCAGGAGAGTATATCGCAGTCCAAGAAGGTAACTCTGTGTATTTGATATTCCAAAAATGTTAGGAATTTTCGATATTCTTGGAGGCCAGTTTGCTGCCCAGTTTAAATCACTTGACTTTTGCCGTTTCTTTTTAACTAAAGACGAGTGTGTTTCCAAACCCATAAACCACAGGGAGCCACTGCAATTGGATTATTCTATATATCGAGCTTACAGATACTGAGTATAACAAGTCTGGAATCACTTCTGAAAGAAAGTACTTAAATACTTTTGAAGAAGTACTTAAATACTTTTGAAGTGTTTTTAAGTTATGTTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGCGTGGAAACCTCTCTCTAGTAAACGCGTGGAAACCTCTCTTAAAACCATGAGGCTGATGACAATATGTAACGGGCCAAAGCAGACAATATCTTATTATTACAACCATTATTATAATATATACATACATATTTAATTATGTTGTGCGATTGTTTGGTGTACAGGCCTTTAAGAGGGAGAAGCAGCAGCAGGAGCAGTAGCAGTAGTTCTCCACCCCGCAAGCCATAAGAACTCTACACATTTTGCGCCCTCTCACTCCCTAATTCTCTCTTGTTCTATCTGTGTATTCCAAAAGATGCGACATTGTTTCCCCACACCTGGTGAAGAGCCGAGCCTTCTTGTGGTGAAAATATTTGTGGATTAAATGCCATTCTGGGCTTGTCAGCAGTAGTTAGTTTCCTGTCACTATTGAATCAAACATTTTGATATCCTTGCTTCTAACTGCACTCTGTAGTATTATTACATTTCTTCTACTATACAAAGGCCCAGACGTGGAGTTCTCCCTTTTCTTATTCATTTTAGAGACATCCCCTCGTATTTTATGTCGGTCTAGTTTGTGTCTATTCGACTCTTGTGGGGTGGGGGGCACGGAAACAAGATGCCCGTCTTTAGGCTTTTGCTATCCTTTCTCGTGAAGAAGGTCTGCTCGCAACTTTAGAAAATGATTAATAAGTTTTTAACTGAATTTTTTATTTTATGATTCATAGGTATTTGGTTTACTCTAGGATTTCATGTCTGGTATATCTTGTGAGATTTTTTAGATAAAAAATTAAAAATCCAAAGATTAAATAGATGTTTTTGAAGTTTAGGAGTAAAAGTTGGGGTATATTAATTATTATTTATTTTTTTTAAAAAAATTTAGTTATATAGATGGAAATCTTGAATTTAGAAAAATTAACTTTTTCAGAATTGTTTTGGGTTTAAATCCATTTTAAACTTTTAGTTTGTTATATATATATATATATATATATATATATATATTTTTAGGAAAACTACGTCGTTTTAAAGGGAGAAAATACGAGTTCCAGATTTCTATATATGGTCTATTTTGCGGATATTTTTCATGATTTACAGAAAGCGCCATTTCGGACAGAAACGCACCAAATGGAAGGGGAGAAAAACGGCGCATACTTCTTGGTCAAATTGACTCTCTCAGATCGCTTTTCTCCTCGAACTCGAATTCTCATCTTCGTTTTAATAAATCTCTCTTTTTTTTTTTGGGCCCAAATCTCCTTCTATACCCTATAAAATATGTAATTTTTTCGAACTTTTTCAGCTTGATTTTGATCTTTCGCTCAGCTGCTGTCAGGAACACAGGGCAAGTGACTTGCTCCGGCGACTAAGGAATACTCGTCATATTCAGGTTCGTTTACTTGTTACTCGGTTTTTGGCGTCAATGTTTGGCCATGGATTTAGGGCTTTGAATTTGATCCAAACCCGACCTCCGGATGTTTCTCTAATTGATGGGTTCTGCTTGGTTTTACATTTTACAATCGATTCTCTTCTGCCTGTGTGACTTGGGGATTATACTGTTATTTGCCTCATGCTAATTCTACAAATGTTTCAATTGTAAATGGTTGATGAAAGGAAGCCTGAGTAGAAGTTTGTTTGAGTTGTGGATGCGAAAAATCATGTATGTTAAGAATATTGATTGTTCTTTTGGCATACTTAACTGTTCTTTTAAAGAGAAATGTTTAAACTCCACTGTGATTGTAATACATACTTCCATGAATTGGTATTTGTCTTTGCTGTCACTGATTGGGCTTTTTCGCTTGTTCTTGTGTATAGAATGAGCAGAGTTTCTTGAATTGA

mRNA sequence

GTTTCGACCATTTCTGTGTCGCTTTTCTCTTCAATATCTCTAAATCTCAAACGAAACGGGTTTAAGTTAGGGTTTCAAATTTCGCTCTGCAGCTATTGCCGGCCATGGCTAAACCAAGCAGAGGCCGTCGTTCGCCGCCGTCGGGTTCGGGATCCTCCTCACGTTCCCGCTCATACTCCGGCTCTGGTTCCCGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCATCTGTGTCCCGCTCCCGCTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTATCACGAAGCGGTACTTCTCGAAGCCGAAGCCCCGCTCCTCAAAGAAAGAGTCCGAATGAAACAGCTCGGCGGACTCGCGCTTCATCTCCACTAGCTAAACGAATTTCTCCGCCACCCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATTGATCCACTGAGTAGGAATGTCCATGAGGGTAATTTTGGTGAAGTAGTCCATGTTGAGCTGGCAATGGATCGCACAGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACAAGACCTGATGCTGAAAAAGCCCAATTGCATATGGATGGTGCCCAAATTGATGGGAATGTTATTCGAACAAGATTTACATTGCCTCAAAGACAGAAGATCCCAACACCTCCAAGGACTGTAGCAACCGCTTCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTGCTGATGCTGAGAAGAATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAGCCTCCTTCTCCTAGAAGACGCTCGCCTATTGCTCGACGAGGTGGGTCTCCTAGAAGACAACCCGATTCTCCTCGCCGCCGTCCAGAGTCTCCTCCGCGTCGCCGCTTAGAATCTCCCCCTAGAAGGAGGCCTGCATCACCCATGAGAGGTGGCCGTTCTCCATCGCCTTTGGCAAGGCGACATAGATCTCCTCCAAGGCCCTCTCCAAGAAGAATTCGTGACAGTCCTGTTCGAAGACGTTCACCACCCCCTCCTAGGCGCCGTACACCGCCTCGACGTGCTCGTAGTCCTCCAAGAAGGTCTCCAGTAGTTCGCAGAAAGAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATCTTCACCACGGAGGTGCCCAGGAGAGTATATCGCAGTCCAAGAAGGAGTAAAAGTTGGGAAAGCGCCATTTCGGACAGAAACGCACCAAATGGAAGGGGAGAAAAACGGCGCATACTTCTTGCTTGATTTTGATCTTTCGCTCAGCTGCTGTCAGGAACACAGGGCAAGTGACTTGCTCCGGCGACTAAGGAATACTCGTCATATTCAGAATGAGCAGAGTTTCTTGAATTGA

Coding sequence (CDS)

ATGGCTAAACCAAGCAGAGGCCGTCGTTCGCCGCCGTCGGGTTCGGGATCCTCCTCACGTTCCCGCTCATACTCCGGCTCTGGTTCCCGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCATCTGTGTCCCGCTCCCGCTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTATCACGAAGCGGTACTTCTCGAAGCCGAAGCCCCGCTCCTCAAAGAAAGAGTCCGAATGAAACAGCTCGGCGGACTCGCGCTTCATCTCCACTAGCTAAACGAATTTCTCCGCCACCCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATTGATCCACTGAGTAGGAATGTCCATGAGGGTAATTTTGGTGAAGTAGTCCATGTTGAGCTGGCAATGGATCGCACAGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACAAGACCTGATGCTGAAAAAGCCCAATTGCATATGGATGGTGCCCAAATTGATGGGAATGTTATTCGAACAAGATTTACATTGCCTCAAAGACAGAAGATCCCAACACCTCCAAGGACTGTAGCAACCGCTTCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTGCTGATGCTGAGAAGAATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAGCCTCCTTCTCCTAGAAGACGCTCGCCTATTGCTCGACGAGGTGGGTCTCCTAGAAGACAACCCGATTCTCCTCGCCGCCGTCCAGAGTCTCCTCCGCGTCGCCGCTTAGAATCTCCCCCTAGAAGGAGGCCTGCATCACCCATGAGAGGTGGCCGTTCTCCATCGCCTTTGGCAAGGCGACATAGATCTCCTCCAAGGCCCTCTCCAAGAAGAATTCGTGACAGTCCTGTTCGAAGACGTTCACCACCCCCTCCTAGGCGCCGTACACCGCCTCGACGTGCTCGTAGTCCTCCAAGAAGGTCTCCAGTAGTTCGCAGAAAGAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATCTTCACCACGGAGGTGCCCAGGAGAGTATATCGCAGTCCAAGAAGGAGTAAAAGTTGGGAAAGCGCCATTTCGGACAGAAACGCACCAAATGGAAGGGGAGAAAAACGGCGCATACTTCTTGCTTGATTTTGATCTTTCGCTCAGCTGCTGTCAGGAACACAGGGCAAGTGACTTGCTCCGGCGACTAAGGAATACTCGTCATATTCAGAATGAGCAGAGTTTCTTGAATTGA

Protein sequence

MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHEGNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRRCPGEYIAVQEGVKVGKAPFRTETHQMEGEKNGAYFLLDFDLSLSCCQEHRASDLLRRLRNTRHIQNEQSFLN

Homology

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BLAST of CmaCh09G007360 vs. Swiss-Prot
Match: SR45_ARATH (Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana GN=SR45 PE=1 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 6.3e-86
Identity = 239/366 (65.30%), Postives = 274/366 (74.86%), Query Frame = 1


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSP S SGSSSRS S S SGS       S S S+SRSRSRSRS+SSSSS SR
Sbjct: 1   MAKPSRGRRSP-SVSGSSSRSSSRSRSGS-------SPSRSISRSRSRSRSLSSSSSPSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           S +S SRSP  + KSP   ARR R+  P   + +  P K + V+ESLVLH+D LSRNV+E
Sbjct: 61  SVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRNVNE 120

Query: 121 -------GNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
                  GNFGEV+HVE+AMDR VNLP+G+GYVEFK R DAEKAQL+MDGAQIDG V++ 
Sbjct: 121 AHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKVVKA 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKN-DMKRQREPSPRRKPP-SPRRR 240
            FTLP RQK+ +PP+ V+ A KRD PK +N  ADAEK+   +R RE SP+RK   SPRRR
Sbjct: 181 TFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSPRRR 240

Query: 241 SPIARRGGSPRRQ-PDSP-RRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPP 300
           SP+ RRG SPRR+ PDSP RRRP SP RRR ++PPRRRPASP RG    SP  RR+RSPP
Sbjct: 241 SPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPP 300

Query: 301 RPSPRRIRDSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSS 355
           R SPRRIR SPVRRRSP P RRR+ PPRR RSPPRRSP +RR+SRSPIRRP RSRS S S
Sbjct: 301 RGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRPGRSRSSSIS 356

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BLAST of CmaCh09G007360 vs. Swiss-Prot
Match: RNPS1_XENTR (RNA-binding protein with serine-rich domain 1 OS=Xenopus tropicalis GN=rnps1 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-15
Identity = 106/261 (40.61%), Postives = 136/261 (52.11%), Query Frame = 1


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGTS 64
           +R RRS  SGS SSSRSRS S S S S S S S S S S S S SRS SSSSS S S +S
Sbjct: 64  ARKRRSASSGSSSSSRSRSSSSSSSSSGSSSGSSSGSSSSSAS-SRSGSSSSSRSSSSSS 123

Query: 65  RSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHEGN-- 124
            S SP+P R+  ++  RR+R+ S   KR     ++ SP      +HI  L+RNV + +  
Sbjct: 124 SSGSPSPSRRR-HDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDHIL 183

Query: 125 -----FGEVVHVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFT 184
                +G++  +++ +DR   +L KGY YVEF+   +AEKA  HMDG QIDG  I     
Sbjct: 184 EIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITASAV 243

Query: 185 L---PQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 244
           L   P R      PR  +   +   P P           M R+  P  RR+  SPRRRSP
Sbjct: 244 LTPWPMRAM----PRRFSPPRRMLPPPP-----------MWRRSPPRMRRRSRSPRRRSP 303

Query: 245 IARRGGSPRRQPDSPRRRPES 255
           + RR  SP R+    R    S
Sbjct: 304 VRRRSRSPARRRHRSRSSSNS 307

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BLAST of CmaCh09G007360 vs. Swiss-Prot
Match: RNP1B_XENLA (RNA-binding protein with serine-rich domain 1-B OS=Xenopus laevis GN=rnps1-b PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 9.9e-15
Identity = 104/261 (39.85%), Postives = 137/261 (52.49%), Query Frame = 1


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGTS 64
           ++ RRS  SGS SSSRSRS   S S SSS S S S+S S S + SRS SSSSS S S +S
Sbjct: 39  AKKRRSASSGSSSSSRSRS--SSSSSSSSGSSSGSSSGSSSSASSRSGSSSSSRSSSSSS 98

Query: 65  RSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHEGN-- 124
            S SP+P R+  ++  RR+R+ S   KR     ++ SP      +HI  L+RNV + +  
Sbjct: 99  SSGSPSPSRRR-HDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDHIL 158

Query: 125 -----FGEVVHVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFT 184
                +G++  +++ +DR   +L KGY YVEF+   +AEKA  HMDG QIDG  I     
Sbjct: 159 EIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITASAV 218

Query: 185 L---PQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 244
           L   P R      PR  +   +   P P           M R+  P  RR+  SPRRRSP
Sbjct: 219 LTPWPMRAM----PRRFSPPRRMLPPPP-----------MWRRSPPRMRRRSRSPRRRSP 278

Query: 245 IARRGGSPRRQPDSPRRRPES 255
           + RR  SP R+    R    S
Sbjct: 279 VRRRSRSPARRRHRSRSSSNS 281

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BLAST of CmaCh09G007360 vs. Swiss-Prot
Match: RNP1A_XENLA (RNA-binding protein with serine-rich domain 1-A OS=Xenopus laevis GN=rnps1-a PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.7e-14
Identity = 103/258 (39.92%), Postives = 135/258 (52.33%), Query Frame = 1


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGTS 64
           ++ RRS  SGS SSS SR  S S S SSS S S S+S S S + SRS SSSSS S S +S
Sbjct: 39  AKKRRSGSSGSSSSSHSR--SSSSSSSSSGSSSGSSSGSSSSASSRSGSSSSSRSSSSSS 98

Query: 65  RSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE---- 124
            S SP+P R+  ++  RR+R+ S   KR     ++ SP      +HI  L+RNV +    
Sbjct: 99  SSGSPSPSRRR-HDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDHIL 158

Query: 125 ---GNFGEVVHVELAMDR-TVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFT 184
                +G++  +++ +DR   +L KGY YVEF+   +AEKA  HMDG QIDG  I     
Sbjct: 159 EIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITASAV 218

Query: 185 LPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIAR 244
           L      P P R   +  +R  P P           M R+  P  RR+  SPRRRSP+ R
Sbjct: 219 LTPWPMRPMPRR--FSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPVRR 278

Query: 245 RGGSPRRQPDSPRRRPES 255
           R  SP R+    R    S
Sbjct: 279 RSRSPARRRHRSRSSSNS 281

[Close]

BLAST of CmaCh09G007360 vs. Swiss-Prot
Match: RNPS1_DANRE (RNA-binding protein with serine-rich domain 1 OS=Danio rerio GN=rnps1 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 8.4e-14
Identity = 105/258 (40.70%), Postives = 136/258 (52.71%), Query Frame = 1


Query: 6   RGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGTSR 65
           R RRS  +GS SSSRS S S S S SSS S S S+S S S   SRS SSSSS S S +  
Sbjct: 40  RKRRSNSTGS-SSSRSSSSSSSSSGSSSGSSSGSSSSSGS---SRSGSSSSSRSSSSSGS 99

Query: 66  SRSPAPQRKSPNETARRTRASSPLAKRISPPPRK-PSPVRESLVLHIDPLSRNVHE---- 125
           S SP+P R+  ++  RR+R+ S   KR     RK  SP  +   L++  L+RNV +    
Sbjct: 100 SGSPSPSRRR-HDNRRRSRSKSKSQKRTDEKERKRRSPSPKPTKLYLGRLTRNVTKDHIQ 159

Query: 126 ---GNFGEVVHVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFT 185
                +G++  +++  DR   N+ KGY YVE+++  DA+KA  HMDG QIDG  I     
Sbjct: 160 EIFATYGKIKMIDMPSDRLHPNVSKGYAYVEYESPEDAQKALKHMDGGQIDGQEITATAI 219

Query: 186 LPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIAR 245
           L QR  I   PR ++   +   P P           M R+  P  RR+  SPRRRSP+ R
Sbjct: 220 LAQR--IRPAPRRLSPPRRMPPPPP-----------MWRRTPPRMRRRSRSPRRRSPVRR 277

Query: 246 RGGSPRRQPDSPRRRPES 255
           R  S  R P   R R  S
Sbjct: 280 RSRS--RSPGRRRHRSRS 277

[Close]

BLAST of CmaCh09G007360 vs. TrEMBL
Match: A0A0A0KZM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G607050 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 2.5e-150
Identity = 324/365 (88.77%), Postives = 336/365 (92.05%), Query Frame = 1


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGS SSSRSRS+SGS SRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSASSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           SG+SRSRSP PQRKSP ETARR+RAS P AKR SPPPRKPSPVRESLVLHID LSRNVHE
Sbjct: 61  SGSSRSRSPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 G-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           G       NFGEVV+VELAMDRTVNLPKGYGYVEFKTR DAEKAQ++MDGAQIDGNVIR 
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQK+PTPPRTVAT  KRDGPKPENVG DAEK+DMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPDSPRRRPESPPRRRLES-------PPRRRPASPMRGGRSPSPLARRHR 300
           +ARRGGSPRRQPDSPRRRP+SPPRRR+ES       PPRRRPASPMRGGRSPSPLARRHR
Sbjct: 241 VARRGGSPRRQPDSPRRRPDSPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSPLARRHR 300

Query: 301 SPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRS 352
           SPPRPSPRRIR SPVRRRSPPPPRRRTPPRRARSPPRRSPVVRR+SRSPIRRPARSRSRS
Sbjct: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360

[Close]

BLAST of CmaCh09G007360 vs. TrEMBL
Match: D7SWX8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00590 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 3.8e-106
Identity = 276/375 (73.60%), Postives = 296/375 (78.93%), Query Frame = 1


Query: 1   MAKPSRGRRSPPSGSGSSS----RSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSS 60
           MAKP RGR SPPSGS S S    RSRSYSGS SRSSSRSRS S        RSRS SSSS
Sbjct: 1   MAKPGRGRPSPPSGSASGSSSRSRSRSYSGSDSRSSSRSRSPS--------RSRSFSSSS 60

Query: 61  SLSRSGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSR 120
           S SRS +SRSRS +P+RKSP E A+R R+  P +KR SPPPRK SP+RESLVLHI  LSR
Sbjct: 61  SQSRSVSSRSRSVSPKRKSP-EVAKRGRSPPPQSKRTSPPPRKVSPIRESLVLHIGSLSR 120

Query: 121 NVHEG-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGN 180
           NV+EG       NFGEVVHVELAMDRTVNLPKGYGYVEFKTR DAEKAQL+MDGAQIDGN
Sbjct: 121 NVNEGHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRSDAEKAQLYMDGAQIDGN 180

Query: 181 VIRTRFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPS-P 240
           V+R +FTLPQRQKI +PP+ VATASKRDGPK +NVGAD EK+  KRQRE SPRRKPPS P
Sbjct: 181 VVRAKFTLPQRQKISSPPKAVATASKRDGPKTDNVGADVEKDGPKRQREASPRRKPPSPP 240

Query: 241 RRRSPI-ARRGGSPRRQPDSP-RRRPESP-------PRRRLESPPRRRPASPMRGGRSPS 300
           RRRSP   RRGGSPRRQ DSP RRR ESP       P RR E+PPRRRPASP R GRSP 
Sbjct: 241 RRRSPAPGRRGGSPRRQLDSPQRRRGESPIRHRVESPYRRGETPPRRRPASPSR-GRSPL 300

Query: 301 PLARRHRSPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSP--PRRSPVVRRKSRS-PI 352
              RRHRSP R SPRR+R SPVRRRSPPPPRRR+PPRRARSP  PRRSPV RR+SRS P+
Sbjct: 301 SPPRRHRSPARASPRRMRGSPVRRRSPPPPRRRSPPRRARSPPMPRRSPVNRRRSRSPPV 360

[Close]

BLAST of CmaCh09G007360 vs. TrEMBL
Match: A9PFW8_POPTR (Arginine/serine-rich family protein OS=Populus trichocarpa GN=POPTR_0011s14630g PE=2 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.1e-105
Identity = 269/370 (72.70%), Postives = 300/370 (81.08%), Query Frame = 1


Query: 1   MAKPSRGRRSPPSGSGS--SSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSL 60
           MAKP+RGR +  SGSGS  SSRSRSYSGS SRSSSRSRS    VSRSRSRSRS+SSSSS 
Sbjct: 1   MAKPTRGRPTSRSGSGSGSSSRSRSYSGSDSRSSSRSRS----VSRSRSRSRSLSSSSSS 60

Query: 61  -SRSGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRN 120
            SRS +S SRSP P+++SP E ARR R+  P +K++SPPPRK SP+RESLVLH+D L+RN
Sbjct: 61  PSRSASSGSRSPPPRKRSPAEGARRGRSPPPQSKKVSPPPRKASPIRESLVLHVDSLTRN 120

Query: 121 VHEG-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNV 180
           V+EG       NFGEVVHVELAMDRTVNLPKG+GYVEFKTR DAEKA L+MDGAQIDGNV
Sbjct: 121 VNEGHLREIFSNFGEVVHVELAMDRTVNLPKGFGYVEFKTRADAEKALLYMDGAQIDGNV 180

Query: 181 IRTRFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKP-PSPR 240
           +R +FTLP RQK+  PP+ +A A KRD PK +N  ADAEK+  KRQREPSP RKP  SPR
Sbjct: 181 VRAKFTLPPRQKLSPPPKPIAAAPKRDAPKTDNASADAEKDGPKRQREPSPHRKPLASPR 240

Query: 241 RRSPIARRGGSPRRQPDS-PRRRPESPPRRRLES-------PPRRRPASPMRGGRSPSPL 300
           RRSP+ARRGGSPRRQ DS PRRR +SP RRR+ES       PPRRRPASP R GRSPS  
Sbjct: 241 RRSPVARRGGSPRRQLDSPPRRRADSPGRRRVESPYRRGETPPRRRPASPAR-GRSPSSP 300

Query: 301 ARRHRSPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPAR 352
            RR+RSP R SPRR+R SPVRRRS PPPRRRTPPRRARSPPRRSP +RR+SRSPIRRPAR
Sbjct: 301 PRRYRSPLRASPRRMRGSPVRRRS-PPPRRRTPPRRARSPPRRSP-LRRRSRSPIRRPAR 360

[Close]

BLAST of CmaCh09G007360 vs. TrEMBL
Match: A0A067JMI8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22652 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 2.0e-102
Identity = 268/375 (71.47%), Postives = 294/375 (78.40%), Query Frame = 1


Query: 1   MAKPSRGRRSPPSGSGSSS--------RSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSI 60
           MAKP+RGR SPPSGSGS S        RSRSYSGS SRSSSRSRS S S SRSRSRS+S+
Sbjct: 1   MAKPTRGRPSPPSGSGSGSSSRSRSRSRSRSYSGSDSRSSSRSRSLS-SRSRSRSRSKSL 60

Query: 61  SSSSSLSRSGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHID 120
           SSSSS S S +S SRSP PQ+KSP E A+R R+  P +K+ SPP RK SP+RESLVLH+D
Sbjct: 61  SSSSSPSHSLSSGSRSPPPQKKSPTEVAKRGRSPPPQSKKASPPARKISPIRESLVLHVD 120

Query: 121 PLSRNVHEG-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQ 180
            LSRNV+EG       NFGEVVHVELAMDRTVNLPKGYGYVEFKTR DA+KA L+MDGAQ
Sbjct: 121 SLSRNVNEGHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRADAQKALLYMDGAQ 180

Query: 181 IDGNVIRTRFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKP 240
           IDGNV+R RFTLP RQK+  P + +    KRD  K +N   D EK+  KR RE SP RKP
Sbjct: 181 IDGNVVRARFTLPPRQKVSPPAKPIVAPPKRDASKTDN---DVEKDGPKRIRESSPHRKP 240

Query: 241 -PSPRRRSPIARRGGSPRRQPDS-PRRRPESPPRRRLES-------PPRRRPASPMRGGR 300
             SPRRRSP  RRGGSPRR PDS PRRR +SPPRRR+ES       PPRRRPASP+R GR
Sbjct: 241 LASPRRRSPPVRRGGSPRRLPDSPPRRRADSPPRRRVESPYRRGDTPPRRRPASPVR-GR 300

Query: 301 SPSPLARRHRSPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPI 352
           SPSPL RR+RSP R SPRRIR SPVRRRSPPPPRRRTPPRRARSPPRRSP +RR+SRSPI
Sbjct: 301 SPSPL-RRYRSPARGSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSP-LRRRSRSPI 360

[Close]

BLAST of CmaCh09G007360 vs. TrEMBL
Match: W9SFI4_9ROSA (RNA-binding protein with serine-rich domain 1-A OS=Morus notabilis GN=L484_000559 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 3.3e-102
Identity = 269/375 (71.73%), Postives = 290/375 (77.33%), Query Frame = 1


Query: 1   MAKPSRGRRSPP---SGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSS 60
           MAKPSRGRRSP    SGS S SRSRSYSGS SRSSS SRSRS    RSRSRSRS SSSSS
Sbjct: 1   MAKPSRGRRSPSGSISGSSSRSRSRSYSGSDSRSSSLSRSRS----RSRSRSRSSSSSSS 60

Query: 61  LSRSGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRN 120
            S S +S SRSP P RKSP ETARR R+  P +KR SP PRK SP+ ESLVLHID L+RN
Sbjct: 61  PSHSVSSGSRSPPPSRKSPGETARRGRSPPPQSKRASPSPRKASPIHESLVLHIDALTRN 120

Query: 121 VHEG-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNV 180
           VHEG       NFGEVV+VELAMDR VNLPKGYGYVEFKTR DAEKAQLHMDGAQIDGNV
Sbjct: 121 VHEGHLREIFSNFGEVVNVELAMDRIVNLPKGYGYVEFKTRADAEKAQLHMDGAQIDGNV 180

Query: 181 IRTRFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKP-PSPR 240
           +R RFTLPQRQK+  PP+   +A KRD PK +N+   AEK+  KR REPSPRRKP PSPR
Sbjct: 181 VRARFTLPQRQKVSPPPKAATSAPKRDAPKADNL--SAEKDGPKRPREPSPRRKPLPSPR 240

Query: 241 RRSPIARRGGSPRRQPDS-PRRRPESP--------PRRRLESPPRRRPASPMRGGRSPSP 300
           RRSP+ RRGGSPRR PDS PRRR +SP        P RR ++PPRRR ASP R GRS SP
Sbjct: 241 RRSPVPRRGGSPRRLPDSPPRRRGDSPPPRRRVGSPHRRGDTPPRRRVASPGR-GRSTSP 300

Query: 301 LARRHRSPPRPS-PRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRP 355
           L RR   PPR S PRR+R SPVRRRSP PPRRR+PPRRARSPPRRSP +RR+SRSPIRRP
Sbjct: 301 LPRRRSPPPRGSPPRRMRGSPVRRRSPLPPRRRSPPRRARSPPRRSP-LRRRSRSPIRRP 360

[Close]

BLAST of CmaCh09G007360 vs. TAIR10
Match: AT1G16610.3 (AT1G16610.3 arginine/serine-rich 45)

HSP 1 Score: 321.2 bits (822), Expect = 9.3e-88
Identity = 239/369 (64.77%), Postives = 276/369 (74.80%), Query Frame = 1


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSP S SGSSSRS S S SGS       S S S+SRSRSRSRS+SSSSS SR
Sbjct: 1   MAKPSRGRRSP-SVSGSSSRSSSRSRSGS-------SPSRSISRSRSRSRSLSSSSSPSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           S +S SRSP  + KSP   ARR R+  P   + +  P K + V+ESLVLH+D LSRNV+E
Sbjct: 61  SVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRNVNE 120

Query: 121 -------GNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
                  GNFGEV+HVE+AMDR VNLP+G+GYVEFK R DAEKAQL+MDGAQIDG V++ 
Sbjct: 121 AHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKVVKA 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKN-DMKRQREPSPRRKPP-SPRRR 240
            FTLP RQK+ +PP+ V+ A KRD PK +N  ADAEK+   +R RE SP+RK   SPRRR
Sbjct: 181 TFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSPRRR 240

Query: 241 SPIARRGGSPRRQ-PDSP-RRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPP 300
           SP+ RRG SPRR+ PDSP RRRP SP RRR ++PPRRRPASP RG    SP  RR+RSPP
Sbjct: 241 SPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPP 300

Query: 301 RPSPRRIRDSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSS 358
           R SPRRIR SPVRRRSP P RRR+ PPRR RSPPRRSP +RR+SRSPIRRP RSRS S S
Sbjct: 301 RGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRPGRSRSSSIS 359

[Close]

BLAST of CmaCh09G007360 vs. TAIR10
Match: AT1G79100.1 (AT1G79100.1 arginine/serine-rich protein-related)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-09
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1


Query: 118 VHEGNFGEVVHVELAMDRTVNLPKGYGYVEFKTR-PDAEKAQLHMDG 164
           V  G+FGE++HV+LA+DR  NL +G  YVEFK +  DAEK QL+MDG
Sbjct: 6   VFRGDFGEIIHVQLAIDRAANLSRGDAYVEFKAKIADAEKPQLYMDG 52

[Close]

BLAST of CmaCh09G007360 vs. TAIR10
Match: AT2G29210.1 (AT2G29210.1 splicing factor PWI domain-containing protein)

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-07
Identity = 77/183 (42.08%), Postives = 95/183 (51.91%), Query Frame = 1


Query: 178 PQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIARR 237
           P+R++I +P R+ + +  R   +P + G        +R+R PSP    P+ RRRSP    
Sbjct: 272 PRRRRIHSPFRSRSRSPIRRHRRPTHEGRRQSPAPSRRRRSPSP----PARRRRSP---- 331

Query: 238 GGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIR 297
                  P + RRR  SPP RR      R P  P R  RSPSP ARRHRSPP    RR  
Sbjct: 332 ------SPPARRRRSPSPPARR-----HRSPTPPARQRRSPSPPARRHRSPPPARRRRSP 391

Query: 298 DSPVRRR---SPPPPRRRTPP---RRARSPPRRSPVVR-RKSRSPIRRPARSRSRSSSPR 354
             P RRR   SPP  RRR+P    RR RSP   SP+ R  +SRSP+ +    R RS SP 
Sbjct: 392 SPPARRRRSPSPPARRRRSPSPLYRRNRSP---SPLYRRNRSRSPLAK----RGRSDSPG 428

[Close]

BLAST of CmaCh09G007360 vs. TAIR10
Match: AT1G73530.1 (AT1G73530.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 48.9 bits (115), Expect = 8.9e-06
Identity = 34/117 (29.06%), Postives = 52/117 (44.44%), Query Frame = 1


Query: 94  SPPPRKPSPVRESLVLHIDPLSRNVHEGN-------FGEVVHVELAMDRTVNLPKGYGYV 153
           SPP     P  +   L++  LS    E         FG ++H+ + MD+  N PKG+ ++
Sbjct: 67  SPPSSSSGPKTK---LYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFL 126

Query: 154 EFKTRPDAEKAQLHMDGAQIDGNVIRTRFTLPQRQKIPTPPRTVATASKRDGPKPEN 204
            ++T  +A KA   M G  +DG VI       +       PR       RD PKP++
Sbjct: 127 RYETEEEAMKAIQGMHGKFLDGRVIFVEEAKTRSDMSRAKPR-------RDFPKPQS 173

[Close]

BLAST of CmaCh09G007360 vs. NCBI nr
Match: gi|778695313|ref|XP_011653972.1| (PREDICTED: serine/arginine-rich splicing factor SR45 [Cucumis sativus])

HSP 1 Score: 540.0 bits (1390), Expect = 3.6e-150
Identity = 324/365 (88.77%), Postives = 336/365 (92.05%), Query Frame = 1


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGS SSSRSRS+SGS SRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSASSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           SG+SRSRSP PQRKSP ETARR+RAS P AKR SPPPRKPSPVRESLVLHID LSRNVHE
Sbjct: 61  SGSSRSRSPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 G-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           G       NFGEVV+VELAMDRTVNLPKGYGYVEFKTR DAEKAQ++MDGAQIDGNVIR 
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQK+PTPPRTVAT  KRDGPKPENVG DAEK+DMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPDSPRRRPESPPRRRLES-------PPRRRPASPMRGGRSPSPLARRHR 300
           +ARRGGSPRRQPDSPRRRP+SPPRRR+ES       PPRRRPASPMRGGRSPSPLARRHR
Sbjct: 241 VARRGGSPRRQPDSPRRRPDSPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSPLARRHR 300

Query: 301 SPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRS 352
           SPPRPSPRRIR SPVRRRSPPPPRRRTPPRRARSPPRRSPVVRR+SRSPIRRPARSRSRS
Sbjct: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360

[Close]

BLAST of CmaCh09G007360 vs. NCBI nr
Match: gi|659130948|ref|XP_008465435.1| (PREDICTED: arginine/serine-rich protein 45 [Cucumis melo])

HSP 1 Score: 537.0 bits (1382), Expect = 3.1e-149
Identity = 324/365 (88.77%), Postives = 336/365 (92.05%), Query Frame = 1


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRS+SGS SRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           SG+SRSR+P PQRKSP ETARR+RAS P AKR SPPPRKPSPVRESLVLHID LSRNVHE
Sbjct: 61  SGSSRSRTPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 G-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           G       NFGEVV+VELAMDRTVNLPKGYGYVEFKTR DAEKAQ++MDGAQIDGNVIR 
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQK+PTPPRTVAT SKRDGPKPENVG DAEK+DMKRQRE SPRRK PSPRRRSP
Sbjct: 181 RFTLPQRQKMPTPPRTVATVSKRDGPKPENVGPDAEKDDMKRQRESSPRRKLPSPRRRSP 240

Query: 241 IARRGGSPRRQPDSPRRRPESPPRRRLES-------PPRRRPASPMRGGRSPSPLARRHR 300
           +ARRGGSPRRQPDSPRRRPESPPRRR+ES       PPRRRPASPMRGGRSPSPLARRHR
Sbjct: 241 VARRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPPRRRPASPMRGGRSPSPLARRHR 300

Query: 301 SPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRS 352
           SPPRPSPRRIR SPVRRRSPPPPRRRTPPRRARSPPRRSPVVRR+SRSPIRRPARSRSRS
Sbjct: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360

[Close]

BLAST of CmaCh09G007360 vs. NCBI nr
Match: gi|743859989|ref|XP_011030737.1| (PREDICTED: serine/arginine-rich splicing factor SR45 isoform X1 [Populus euphratica])

HSP 1 Score: 394.8 bits (1013), Expect = 1.9e-106
Identity = 271/370 (73.24%), Postives = 301/370 (81.35%), Query Frame = 1


Query: 1   MAKPSRGRRSPPSGSGS--SSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSL 60
           MAKP+RGR +  SGSGS  SSRSRSYSGS SRSSSRSRS    VSRSRSRSRS+SSSSS 
Sbjct: 1   MAKPTRGRPTSRSGSGSGSSSRSRSYSGSDSRSSSRSRS----VSRSRSRSRSLSSSSSS 60

Query: 61  -SRSGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRN 120
            SRS +S SRSP P+++SP E ARR R+  P +K++SPPPRK SP+RESLVLHID L+RN
Sbjct: 61  PSRSASSGSRSPPPRKRSPAEGARRGRSPPPQSKKLSPPPRKASPIRESLVLHIDSLTRN 120

Query: 121 VHEG-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNV 180
           V+EG       NFGEVVHVELAMDRTVNLPKG+GYVEFKTR DAEKA L+MDGAQIDGNV
Sbjct: 121 VNEGHLREIFSNFGEVVHVELAMDRTVNLPKGFGYVEFKTRADAEKALLYMDGAQIDGNV 180

Query: 181 IRTRFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKP-PSPR 240
           +R +FTLP RQK+  PP+ +A A KRD PK +N  ADAEK+  KRQREPSP RKP PSPR
Sbjct: 181 VRAKFTLPPRQKLSPPPKPIAAAPKRDAPKADNASADAEKDGPKRQREPSPHRKPLPSPR 240

Query: 241 RRSPIARRGGSPRRQPDS-PRRRPESPPRRRLES-------PPRRRPASPMRGGRSPSPL 300
           RRSP+ARRGGSPRRQ DS PRRR +SP RRR+ES       PPRRRPASP R GRSPS  
Sbjct: 241 RRSPVARRGGSPRRQLDSPPRRRADSPGRRRVESPYRRGETPPRRRPASPAR-GRSPSSP 300

Query: 301 ARRHRSPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPAR 352
            RR+RSP R SPRR+R SPVRRRS PPPRRRTPPRRARSPPRRSP +RR+SRSPIRRPAR
Sbjct: 301 PRRYRSPLRASPRRMRGSPVRRRS-PPPRRRTPPRRARSPPRRSP-LRRRSRSPIRRPAR 360

[Close]

BLAST of CmaCh09G007360 vs. NCBI nr
Match: gi|1009130128|ref|XP_015882129.1| (PREDICTED: serine/arginine-rich splicing factor SR45 [Ziziphus jujuba])

HSP 1 Score: 393.7 bits (1010), Expect = 4.2e-106
Identity = 281/383 (73.37%), Postives = 306/383 (79.90%), Query Frame = 1


Query: 1   MAKPSRGRRSPPSGS--GSSSRSRSYSGSGSRSSSRSR--SRSASVSRSRSRSRSISSSS 60
           MAKPSRGRRSPPSGS  GSSSRSRSYSGS SRS+SRSR  SRS SVSRS SRSRSIS+SS
Sbjct: 1   MAKPSRGRRSPPSGSNSGSSSRSRSYSGSSSRSTSRSRSYSRSPSVSRSPSRSRSISTSS 60

Query: 61  SLSRSGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSP-VRESLVLHIDPLS 120
           S SRS +SRSR+P P RKSP ETARR R+  P +K+ SPPPRK SP   ESLVLHID L+
Sbjct: 61  SPSRSASSRSRTP-PPRKSPVETARRGRSPPPQSKKASPPPRKASPSTHESLVLHIDALT 120

Query: 121 RNVHEG-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDG 180
           RNVHEG       NFGEVVHVELAMDRTVNLPKGYGYVEFKTR DAEKAQL+MDGAQIDG
Sbjct: 121 RNVHEGHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRSDAEKAQLYMDGAQIDG 180

Query: 181 NVIRTRFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRK-PPS 240
           NV+R RFTLPQRQK+  PP+ VA A KRD  K +NV AD  K+  KR REPSPRRK PPS
Sbjct: 181 NVVRARFTLPQRQKVSPPPKAVAGAPKRDISKSDNVSAD--KDGPKRPREPSPRRKPPPS 240

Query: 241 PRRRSPIARRGGSPRRQPDS-PRRRPESPPRRRLES-------PPRRRPASPMRGGRSPS 300
           PRRRSP+ARRGGSPRR PDS PRRR ESP RRR+ES       PPRRR ASP R GRSPS
Sbjct: 241 PRRRSPVARRGGSPRRLPDSPPRRRAESPVRRRIESPYRRGDTPPRRRLASPPR-GRSPS 300

Query: 301 PLARRHRSPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRP 360
           P  RR RSP R SPRR+R SP+RRRSP PPRRR+PPRRARS PRRSP+ RR++RSPIRRP
Sbjct: 301 PPPRR-RSPARASPRRMRGSPIRRRSPLPPRRRSPPRRARS-PRRSPISRRRTRSPIRRP 360

Query: 361 ARSRSRSSSPRRCPGEYIAVQEG 363
           ARSR+RS SP R  G  +A + G
Sbjct: 361 ARSRTRSISPPR-RGRALATRRG 376

[Close]

BLAST of CmaCh09G007360 vs. NCBI nr
Match: gi|225462181|ref|XP_002268483.1| (PREDICTED: serine/arginine-rich splicing factor SR45 [Vitis vinifera])

HSP 1 Score: 393.3 bits (1009), Expect = 5.5e-106
Identity = 276/375 (73.60%), Postives = 296/375 (78.93%), Query Frame = 1


Query: 1   MAKPSRGRRSPPSGSGSSS----RSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSS 60
           MAKP RGR SPPSGS S S    RSRSYSGS SRSSSRSRS S        RSRS SSSS
Sbjct: 1   MAKPGRGRPSPPSGSASGSSSRSRSRSYSGSDSRSSSRSRSPS--------RSRSFSSSS 60

Query: 61  SLSRSGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSR 120
           S SRS +SRSRS +P+RKSP E A+R R+  P +KR SPPPRK SP+RESLVLHI  LSR
Sbjct: 61  SQSRSVSSRSRSVSPKRKSP-EVAKRGRSPPPQSKRTSPPPRKVSPIRESLVLHIGSLSR 120

Query: 121 NVHEG-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGN 180
           NV+EG       NFGEVVHVELAMDRTVNLPKGYGYVEFKTR DAEKAQL+MDGAQIDGN
Sbjct: 121 NVNEGHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRSDAEKAQLYMDGAQIDGN 180

Query: 181 VIRTRFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPS-P 240
           V+R +FTLPQRQKI +PP+ VATASKRDGPK +NVGAD EK+  KRQRE SPRRKPPS P
Sbjct: 181 VVRAKFTLPQRQKISSPPKAVATASKRDGPKTDNVGADVEKDGPKRQREASPRRKPPSPP 240

Query: 241 RRRSPI-ARRGGSPRRQPDSP-RRRPESP-------PRRRLESPPRRRPASPMRGGRSPS 300
           RRRSP   RRGGSPRRQ DSP RRR ESP       P RR E+PPRRRPASP R GRSP 
Sbjct: 241 RRRSPAPGRRGGSPRRQLDSPQRRRGESPIRHRVESPYRRGETPPRRRPASPSR-GRSPL 300

Query: 301 PLARRHRSPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSP--PRRSPVVRRKSRS-PI 352
              RRHRSP R SPRR+R SPVRRRSPPPPRRR+PPRRARSP  PRRSPV RR+SRS P+
Sbjct: 301 SPPRRHRSPARASPRRMRGSPVRRRSPPPPRRRSPPRRARSPPMPRRSPVNRRRSRSPPV 360

The following BLAST results are available for this feature:

BLAST of CmaCh09G007360 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SR45_ARATH	6.3e-86	65.30	Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana GN=SR45 PE=1 S...	[more]
RNPS1_XENTR	1.5e-15	40.61	RNA-binding protein with serine-rich domain 1 OS=Xenopus tropicalis GN=rnps1 PE=...	[more]
RNP1B_XENLA	9.9e-15	39.85	RNA-binding protein with serine-rich domain 1-B OS=Xenopus laevis GN=rnps1-b PE=...	[more]
RNP1A_XENLA	1.7e-14	39.92	RNA-binding protein with serine-rich domain 1-A OS=Xenopus laevis GN=rnps1-a PE=...	[more]
RNPS1_DANRE	8.4e-14	40.70	RNA-binding protein with serine-rich domain 1 OS=Danio rerio GN=rnps1 PE=2 SV=1	[more]

BLAST of CmaCh09G007360 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZM9_CUCSA	2.5e-150	88.77	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G607050 PE=4 SV=1	[more]
D7SWX8_VITVI	3.8e-106	73.60	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00590 PE=4 SV=...	[more]
A9PFW8_POPTR	1.1e-105	72.70	Arginine/serine-rich family protein OS=Populus trichocarpa GN=POPTR_0011s14630g ...	[more]
A0A067JMI8_JATCU	2.0e-102	71.47	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22652 PE=4 SV=1	[more]
W9SFI4_9ROSA	3.3e-102	71.73	RNA-binding protein with serine-rich domain 1-A OS=Morus notabilis GN=L484_00055...	[more]

BLAST of CmaCh09G007360 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G16610.3	9.3e-88	64.77	arginine/serine-rich 45	[more]
AT1G79100.1	1.0e-09	59.57	arginine/serine-rich protein-related	[more]
AT2G29210.1	2.1e-07	42.08	splicing factor PWI domain-containing protein	[more]
AT1G73530.1	8.9e-06	29.06	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

BLAST of CmaCh09G007360 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778695313\|ref\|XP_011653972.1\|	3.6e-150	88.77	PREDICTED: serine/arginine-rich splicing factor SR45 [Cucumis sativus]	[more]
gi\|659130948\|ref\|XP_008465435.1\|	3.1e-149	88.77	PREDICTED: arginine/serine-rich protein 45 [Cucumis melo]	[more]
gi\|743859989\|ref\|XP_011030737.1\|	1.9e-106	73.24	PREDICTED: serine/arginine-rich splicing factor SR45 isoform X1 [Populus euphrat...	[more]
gi\|1009130128\|ref\|XP_015882129.1\|	4.2e-106	73.37	PREDICTED: serine/arginine-rich splicing factor SR45 [Ziziphus jujuba]	[more]
gi\|225462181\|ref\|XP_002268483.1\|	5.5e-106	73.60	PREDICTED: serine/arginine-rich splicing factor SR45 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0000166	nucleotide binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003723	RNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G007360.1	CmaCh09G007360.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 122..172 score: 2.
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 108..174 score: 7.
IPR000504	RNA recognition motif domain	PROFILE	PS50102	RRM	coord: 112..178 score: 11
IPR012677	Nucleotide-binding alpha-beta plait domain	GENE3D	G3DSA:3.30.70.330		coord: 122..182 score: 2.6
IPR012677	Nucleotide-binding alpha-beta plait domain	unknown	SSF54928	RNA-binding domain, RBD	coord: 95..190 score: 2.17
None	No IPR available	PANTHER	PTHR15481	RIBONUCLEIC ACID BINDING PROTEIN S1	coord: 5..185 score: 1.0E-71coord: 267..351 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G007360	Cla023229	Watermelon (97103) v1	cmawmB038
CmaCh09G007360	Csa4G607050	Cucumber (Chinese Long) v2	cmacuB025
CmaCh09G007360	ClCG11G016430	Watermelon (Charleston Gray)	cmawcgB016
CmaCh09G007360	CSPI04G21560	Wild cucumber (PI 183967)	cmacpiB024
CmaCh09G007360	CmoCh09G007280	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G007360	CmoCh01G013630	Cucurbita moschata (Rifu)	cmacmoB051
CmaCh09G007360	Lsi04G018790	Bottle gourd (USVL1VR-Ls)	cmalsiB025
CmaCh09G007360	Cp4.1LG02g02450	Cucurbita pepo (Zucchini)	cmacpeB048
CmaCh09G007360	Cp4.1LG06g05800	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G007360	CsaV3_4G031880	Cucumber (Chinese Long) v3	cmacucB0032
CmaCh09G007360	Cla97C11G222360	Watermelon (97103) v2	cmawmbB021
CmaCh09G007360	Bhi09G003015	Wax gourd	cmawgoB0028
CmaCh09G007360	CsGy4G020080	Cucumber (Gy14) v2	cgybcmaB470
CmaCh09G007360	Carg14779	Silver-seed gourd	carcmaB0435
CmaCh09G007360	Carg20052	Silver-seed gourd	carcmaB1445

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh09G007360	CmaCh01G013060	Cucurbita maxima (Rimu)	cmacmaB054

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G007360	Cucurbita maxima (Rimu)	cmacmaB045
CmaCh09G007360	Cucumber (Gy14) v1	cgycmaB0076
CmaCh09G007360	Cucurbita moschata (Rifu)	cmacmoB041
CmaCh09G007360	Melon (DHL92) v3.5.1	cmameB036
CmaCh09G007360	Melon (DHL92) v3.6.1	cmamedB035