CmaCh09G007070 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G007070
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr09 : 3336164 .. 3343037 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGAGTTCATCAAGCCTAACAAGGCCGTTGTTGTTCTGCAATGCCGATTCGCTGGTCGGAATGCTGTGATCGTCCGCAGCTTCGATGAATGAACTCGTGACCGACACTACGGCCATTGATTGGTTTCAGGGATTAAAAAGTACCCGAACATGGTAGTTCGTAAAGATTCCACGAAGAAATTGAGAGTGAAGGCATTCATCAAGCTTGTGAACTACTAGCACCTCATGCCGACAAGGTACACGCTTGACGTCGATCTCAAGGACGTGGTTAATGTCGATTGTTTGCAGTCGAAGGGCTCGAAGGTCGCTGCGTCGAAGGAGATCAAAAAGAGATTGGAGAACAGGTGGTTTTTCACTAAGCTTAGGTTCTGACGGTATGATTTCATTTTTTTTTAGAATCTATTTAGAACTATGAATCTCTATGTCCAGTGCGTATGCTACTAAACGTTGTTCGTAGTGTATCCTTTTGGCATTTTATAATTATTAATGTTTTTCCTTTTCATCATGAGATTCCAATGATCGTATGAGAGTTCATTGCTTAGTTGAAACTTGAAATGTTGTGATAACGCAATTCCTCCAATACTTATTTTCAAATACAATGGATTAACACAATAAACAGACCAATAATGGTGGTGTGATAAACAGATATTCATAATACTTGGGCTTATTCAGGAAATGAACAACTACAACTGAGATAACACACTAGCCCCAATTCTTTTTTCATAACCCACTGGAGCATACACTGTAATTCAACACCCACCTTATACATTCATCCAAACAAACCTTTCGACGTTTTCGATTAGACTTGCTTGGTTCGACTACTCCTGTTGAGATTTGAGTTCCTTCACCCTGTCTTCAGTATCCTTCAATGCTTTCCCAAAGATGCTTATAATCTGAAAATAATACCATTTTCAGGATTATAGCAATCAAGTTTCGTATTCTACTCATTAATGCTCACAGGGATGCTCGATTATTCTAATACCAACAAATTTGTATCCCCCCACCCCAAATATCAGTTTGTCTTTCTGGAAGACAATCAATTGATGGAAGGATATGTTGCAACATAATGAGGAGGATGTTAGAATCTGTTTGGTACCTCATCAACTTCTTCAGGTGAGACAATGAGGGCAGGACTCATTGTTATAGTATCCCCGGAAACACGTACTAACATTCCGTGCTTCTCACACATTTCACCAAAATATGCAGCTATCCCTGTATTAAATGGACAGCTTGTTAGAACAAATCTAGAGGCAGTATCCAACCTTCATGTTGTAAGAAACCGTTGAGTTGCTGTGTTCATCAAGTTATTACTCAACATGTTGTAGTTGAGATCTGTCTGTAAAGTGTAGTACTTTTGGTTGCTGATTCCAAAATGGGCATTGAATTTATAAGATGTGTAGTCTTGATAAGATTCAAAAGTCCTTTTAGCGATAGAGTTTAATCCACATGATCAATGATAGAATAGTTGAATGGAAACTCTTGACAACAAAAGGAAAATACCCCATTCAGGAGGAAATGGACTGTTGGGTGATTTGTTGTCTGTGAAGTCTGTGCCTGAAATCAATCCCGTCCCCCTTATCTGCAAAAAGACTAAACAAGTTGACACAAGCAAGCGTATTGGAGTACCAAACAAGAATGAAACAATTACTCGAACTGTTACCTCTCCAATGATGGGGCTGTTACTGAAAGCTTTTATACCATCTTGAAACCTTGGAGAGATGTTATTTACTTGCTCAAGAATATTTCTCTCTCTATTGAAGGGCATTGCACAATATCGAACACCAAAATGTTAAGTTACAGATATATGTCAAAAGATATAAACTGTTAGCCTTGATCAGATAATTAACATTCAAGGTAGTCTTGAGGTTGGTTAACACCTGTTAAAGAAAATTAGAAAAGATTGAAAAGATTAGAGCGTAGATCTTTGGTATAGGCATGAAAAACGTACTTGTAGATCTTCAGTGCTTCAATTGCCACAGCACATGCAACAGGATGTCCAGAATATGTAAATCCATGGGCAAAATTACCTGAACAAAAAGACGATCAATTTGTTCTTACGAAAATCTTTTTGTTTGTGCCATTGCTAACATACCAAGCTTATTGCTTTGAGAGTGTATGACATCTGAAACTTCAGGGCTGGCAATGACAGCGCCAATAGGTACATATGCAGAAGAAAGAGCCTGCAAATTTCAGCGCCAAAAACAGGTATTATATGGAAATATCTTCTTCTTAGGCTATAAACATTAAACAAGCGGTTTTGATTCTTCAATTCAGCTCAACTTCATTTCACCTTAGCTATTGATACCAAGTCTGGCTTAATATTGTATTTATCACATCCGAACATCGTCCCAAGCCTTCCAAAACCACAAATAACCTATGGCAGGGAAGGGGTTATAGGATACTAGGTAAGAGAAGTGAAAGGTATGGAGGCAGTAATATTGTATAACCTCATCTGCAATGAGAAGGACATCATATTTCTTCAGCACAGCTTGGACCTGCTCATAAAATTGAAAATTAGTAAATAATTTTCAACTCTTATTTTCTCTTATTTTGAAAATTTGTGGAATTCTATAAGCACTCAGGGCTGCATCTAAATAAGAAAGTGCAAGCAGTCGATGTTTCAAAGTTGCAAATGAAGTGGCTGCTTACTTTATCAAAATAAGTTGCAGGAGGAAGTATCACACCACCTGATCCAATGACGGGTTCGGCAATAAAGGCAGCAATCTGAAAGAAGCAAAGGTTAGAAATACTAAAGATTTTTTGCATATATAAAATGTTTGAAAGTTCACGTCAGGTTTTGTGGCATTACTGTCTCAGGTCCTTCCTTCAGAATGAGATTCTCTAAATTGTTAGCTAATCTTGATGAGAACTCTTCCTCGGTTTCACCTATCATATTATTGTCACATTTAGCATTTTAAAGGTAATTCTATCAAATTCATTGCCTATAAATTAGGGCAGAGTTCAGTGAGAACCGGGAAGATGATAGCGCCAGTAGTGAGGACAGTCTGTGTGCAGGACAAATGGAACAGGAAGATCAAATTGTTGATGCAAAGCTGGAATCCTACAATAAAATTTCCCTAGTTAATAGGCATTGGCCAAGCAAGTTATTTAAAACTATTTGATGTATTAGGAGAATTTCCTGACAAGATGTCTTTTATAATCTTCTTACCCGGTAAGACTGGCCGCTATAAGTGTGGAACCATGGTACCTGAGATAGCAAACATATCAAGATTTGGATGAGTAAAATGAATGGAGCATGTTTGAACGGAGCATTGGATATTGAACATACCCTTTCAAACGAGAGATGATTTTCTTTTTTTTTGGTCGCCCCAGTGCATTATTATAATACCAAGCCAGTTTTACCTACATGAGTTAGAAAATGATGTTATTCATTTGATTTTACATCAAGCAGCAGAGCACATTGCTGACAAACGTCAATTGAATTGACTTGAAGATTGCAATTATGATCAACGCCTATATAAGGTAAATATCCCAAACTTGTACAGTTACATTCAGTTAAACTGGTCACTGAATCATCTTAAACTAAGGTTTCATATTTACCTCACCTCTTTTCCTTCAGTAGCTGGGTAACAGGTAATTAAATTTTCATGGAGAATTTAACCATTGCATACATAAAATTTGCAAGACGTCATACTGACATGATAACAATGGAGAGTAGAGGTGCAAAAGAGGCACCTGAGAGTCATTTGCTTCTGATCCACTATTTGTAAAGAACACCTTCCCCATTTTCCTTGCTGTAAAAATTTCTAGTATTTCTTTTGCTAGATCCTGCAGGAGACAACGTGATAAAAATGCAGCGAAGGTATGAATTTGTTAGAATATTGCTACACTGAAGTAGCTGATTGTATATTAGTGTCTTTATTTGTGATTCAACCTCGGAACATCTTCAAGTTTTTATTTTTTTACTTTTCTTTTGAGATTAATTCTTTTCTGACTGTGTTTGGTATCTTTATTACTGAACTTTCATGTCATGACATCAAAGTGTAAGAATTTTTAGTAGCTTTATTCTGAGAAGTTAATATAATACCAGAGATGGCTTTGTTGTGCGATTCCAAAACGAATGATAAAATGGCAGGGTATTCAGTTGAGCGGTGGCAGCAGCAACAAGCCGAGGCTCACTTCCCCCTGCAGATGATCCAATATTCATATGCAACTCGAAACACATGAATTGCGATTGAATAAGATTTTCACTGCATACAGACTACGGGTACGTCTCTAATGTTGTATTCCTATTTCATAGTCCCCTGTTGTATTCACCATGTTTTTCAAGAGCATGCCCATATATTTAGCCTCAGTAAGCTTTTCTAGACTCCTTAACTTGCTAAGAATAATTTCAGTATTCCCAACTCTTAAATTTTATCCTAATAAAGTTAAATGTGTCTTAAAACACAGTTTCTCCTGATTTTAAAACAGAGCCTGCATGGAATTGAACATGGTCTGTATTTTCACATTGTTTGAAATAAAAAACAGATTATGATACCTGAAATCGTTATAGCACACATACACACACATGAGAAAGTTGACACGACTAATAAAGAAACCAAACATAAACATATGCTTGACAGTCCTTTGATAGTTACATAGCTGCATACAGTAACATTGAGTTTAGAACTCTTAAGAGAGCCATAAGATCGAGAAAAATCATGCGAGAAAAATATCAAGACATAAAAAACAATTATATACTTAAGATAGTAAAAATACCCAAGGATGTGGACCATAAACCAGCCAGGGAGTCGAGATATTTCTTCCCGTTAATGTCATAAACATAGGAACCCTGCAGCCATGATAAATTACCATAACCAAACCAATATTTTTCCAGATATAAACCGATCGAGAAAGCTTAAATCCTTGTGGGTTTGAAAAGTGGCCAGGTATACCTCAGATTTTTCTATGACCAAAGGATTCACATCAGCAATCTGCCAACCAGGCGTGAAAGGAGCAATCATACCATGGCCTTTGAAACTGGGATTTCAGATGTCAAATATGTGAGATTTCATATAATTTCAAATTGAAAATGGTTTGGATGGATGAATATACATGCTGATGTACAGAAAAGGAAATTTTAGGAGGTTCGGGAAGGAAGGCGTTTTTGAAATTTAAAATTTTGTCACAGATGCTCCAAGTTACCCTTGACCATTTCTTGAATCAGTAGTCCAATTATCCCTTTCCAATGATGCTTCGGTACCGTACGGCTGGGTTAGTAATTGAATCTGAGCGAGCCGCTCACTAGAAGTTCTAAAAGCAGCAACATCTTTTGCAGATGAACCAAGCTGGAAAGGATTAAGATGCATAAGTTCATAAGGAATAACATTAAACTTCCCTAAAACATCCAATCAGAGAAAACAAGCTTGTTGTATGGGGGGACATTCTGAACCTCACTTTAATAGTTACCCTTGACCCCACTGCCCAAAGCAAACTCGTTCGGGGTCGTTTTATTCTTTCGTGAGAACACCAAGCCCCCAAACATGGCTAAATTACAAAAGATGAGAACACCAAGCCCCCAAACATGGCTAAATTACAAAAGATATCCCACTACATTGCCATTTATTTCAAAAATACTTTTATTTTTTCAAAATTCTTAGCCTTTATAAACGTTAAAAAAAAAAATACTATAAAAATGATGGACGAAAGGACGACGTATTTGAATGTCTTTCTCTTCGACTTAATCCAAGAAATCAAATCTCTAACTATGGAGTACAACAACCCACCATTAGAAAACACTATAAACGTAATTAGCAGTTAAGTCAACAAACTTGCTCGGTGTTAAACACTAGCGAGAACAAAACAGACAGATATCGGGTCAATCAAAATATGGAAGAGGAAGAAGAAGATGAAAGATAGTCAGATTTGCAAAAAAGGTAGTGATGATCTGAAACCTTGTGTTTGATAATCGTACGAAGCAAATGGTTGAAGCCCATTTCTTCTGGTTCAAGGTGAAGCAAAAAATAATGGAGAACTGATATAAGAAGCAAAGGAAGAGGAGTAGAGTGAGGCAGCACTGGGACTGATGAGCACACTTTAAAGTAGTACTAGAACTCCACTCAATAATGGAGTTGCTGTTAGTTACTGTTTTTCTTTTTAAAAGTTTGCGACACCATTATTATTATTTCGTCCTATTCTGGTCTTTGCTCTTATGTTTTTATTCAAACCTTTTCTCTATACTACAAAGTACACAAAAACAAAATAAAATACGCCGTACTTCGTTTCAATAATATCTTTCACTCGTGGTTACGTTTTAAGTTTGAGTTAAAATGTTTGCAGTATATCCCAAATCTCGCAAACGACTTCTGCAATGCAGCAAGAGCACAGAGTCTCGAGAAAGAAGATAGAAAACCAGAGGAAGAACATACCACCGCCACAACGGGAGTGAAGGACCATCTCCGACTCGTTACAGCAGAGATGTTCTTCACCGGCTCAAGAAACTACCGGTTTGTCCAATGAGCACGGTGATCGGCAGAAAGAATTCAAATCAATGGTGGGGAAAAATGTACTTTTTTGGCTGATTGAGTTCTGAAAGCACAGACTGATGCTGCTGCTGCTTAGAAAATGAAACACTTAAGGGAAAAACTGAAAAAAGAAAGCAACTACGAAACTTTAGTCCTTAATTCCCAAGAAGTTGGAGGCTTTCTTCATTGTCGTCTCGCCGAAGTCACCGTCGATATCTCTACTGTGAAGAACGTCCCGTCTTTGCAGGTAGAAAATTTCTTGTTTGAATTCATCAAGAATTTGCAGAGGAAAAAAGATTTACATTTTCTATCCAAAAGTTAAACAGTGAAGGTGATGATATTTTAAGTTAACTATGTTTTGATAATAAAAAATTAAGATAATTAATAAGATGTGATATAAAGTTTTAG

mRNA sequence

GAGAGTTCATCAAGCCTAACAAGGCCGTTGTTGTTCTGCAATGCCGATTCGCTGGTCGGAATGCTGTGATCGTCCGCAGCTTCGATGAATGAACTCGTGACCGACACTACGGCCATTGATTGGTTTCAGGGATTAAAAAGTACCCGAACATGGTAGTTCGTAAAGATTCCACGAAGAAATTGAGAGTGAAGGCATTCATCAAGCTTGTGAACTACTAGCACCTCATGCCGACAAGGTACACGCTTGACGTCGATCTCAAGGACGTGGTTAATGTCGATTGTTTGCAGTCGAAGGGCTCGAAGGTCGCTGCGTCGAAGGAGATCAAAAAGAGATTGGAGAACAGGAGACAACGTGATAAAAATGCAGCGAAGTATATCCCAAATCTCGCAAACGACTTCTGCAATGCAGCAAGAGCACAGAGTCTCGAGAAAGAAGATAGAAAACCAGAGGAAGAACATACCACCGCCACAACGGGAGTGAAGGACCATCTCCGACTCGTTACAGCAGAGATGTTCTTCACCGGCTCAAGAAACTACCGGTTTGTCCAATGAGCACGGTGATCGGCAGAAAGAATTCAAATCAATGGTGGGGAAAAATGTACTTTTTTGGCTGATTGAGTTCTGAAAGCACAGACTGATGCTGCTGCTGCTTAGAAAATGAAACACTTAAGGGAAAAACTGAAAAAAGAAAGCAACTACGAAACTTTAGTCCTTAATTCCCAAGAAGTTGGAGGCTTTCTTCATTGTCGTCTCGCCGAAGTCACCGTCGATATCTCTACTGTGAAGAACGTCCCGTCTTTGCAGGTAGAAAATTTCTTGTTTGAATTCATCAAGAATTTGCAGAGGAAAAAAGATTTACATTTTCTATCCAAAAGTTAAACAGTGAAGGTGATGATATTTTAAGTTAACTATGTTTTGATAATAAAAAATTAAGATAATTAATAAGATGTGATATAAAGTTTTAG

Coding sequence (CDS)

ATGCCGACAAGGTACACGCTTGACGTCGATCTCAAGGACGTGGTTAATGTCGATTGTTTGCAGTCGAAGGGCTCGAAGGTCGCTGCGTCGAAGGAGATCAAAAAGAGATTGGAGAACAGGAGACAACGTGATAAAAATGCAGCGAAGTATATCCCAAATCTCGCAAACGACTTCTGCAATGCAGCAAGAGCACAGAGTCTCGAGAAAGAAGATAGAAAACCAGAGGAAGAACATACCACCGCCACAACGGGAGTGAAGGACCATCTCCGACTCGTTACAGCAGAGATGTTCTTCACCGGCTCAAGAAACTACCGGTTTGTCCAATGA

Protein sequence

MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKNAAKYIPNLANDFCNAARAQSLEKEDRKPEEEHTTATTGVKDHLRLVTAEMFFTGSRNYRFVQ
Homology
[Close]
BLAST of CmaCh09G007070 vs. Swiss-Prot
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2)

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-07
Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLK+V  +D LQSK  KVAA KE K +LE R +  KN
Sbjct: 81  MPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. Swiss-Prot
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.3e-07
Identity = 31/46 (67.39%), Postives = 32/46 (69.57%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLKD V  D LQSK  KV A KE KK LE R +  KN
Sbjct: 81  MPTRYTLDVDLKDAVVPDVLQSKDKKVTALKETKKSLEERFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. Swiss-Prot
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-06
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLK+V  +D L+SK  KV A KE K +LE R +  KN
Sbjct: 81  MPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. Swiss-Prot
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 8.1e-06
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLD+DLK+VV+ D + SK  KV A KE K + E R +  KN
Sbjct: 81  MPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. TrEMBL
Match: A0A0A0L310_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus GN=Csa_4G618420 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.4e-11
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLKDVVNVDCLQSK SKVAASKEIKKRLE+R +  KN
Sbjct: 81  MPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDRFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. TrEMBL
Match: A0A0A0K3A4_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus GN=Csa_7G209560 PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 4.5e-11
Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLKDVVNVDCLQS+ SKV+ASKEIKKRLENR +  KN
Sbjct: 81  MPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENRFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. TrEMBL
Match: Q9MAV8_PANGI (60S ribosomal protein L27 OS=Panax ginseng PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-07
Identity = 33/46 (71.74%), Postives = 36/46 (78.26%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLKDVV VDCLQS+  KV A+KE K RLE R +  KN
Sbjct: 81  MPTRYTLDVDLKDVVTVDCLQSRDKKVTAAKETKARLEERFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. TrEMBL
Match: A0A0A0KVB4_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus GN=Csa_4G062360 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 3.9e-07
Identity = 33/46 (71.74%), Postives = 35/46 (76.09%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLKDVV VD LQSK  KV A+KE KKR E R +  KN
Sbjct: 81  MPTRYTLDVDLKDVVTVDSLQSKDKKVTAAKETKKRFEERFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. TrEMBL
Match: A0A0A0KXF9_CUCSA (60S ribosomal protein L27 OS=Cucumis sativus GN=Csa_4G061860 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.1e-07
Identity = 32/46 (69.57%), Postives = 35/46 (76.09%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLKDVV +D LQSK  KV A+KE KKR E R +  KN
Sbjct: 81  MPTRYTLDVDLKDVVTIDSLQSKDKKVTAAKETKKRFEERFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. TAIR10
Match: AT4G15000.1 (AT4G15000.1 Ribosomal L27e protein family)

HSP 1 Score: 57.0 bits (136), Expect = 8.3e-09
Identity = 30/46 (65.22%), Postives = 34/46 (73.91%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLK+V  +D LQSK  KVAA KE K +LE R +  KN
Sbjct: 81  MPTRYTLDVDLKEVATLDALQSKDKKVAALKEAKAKLEERFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. TAIR10
Match: AT3G22230.1 (AT3G22230.1 Ribosomal L27e protein family)

HSP 1 Score: 53.9 bits (128), Expect = 7.1e-08
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLK+V  +D L+SK  KV A KE K +LE R +  KN
Sbjct: 81  MPTRYTLDVDLKEVATLDALKSKDKKVTALKEAKAKLEERFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. TAIR10
Match: AT2G32220.1 (AT2G32220.1 Ribosomal L27e protein family)

HSP 1 Score: 51.2 bits (121), Expect = 4.6e-07
Identity = 26/46 (56.52%), Postives = 32/46 (69.57%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLD+DLK+VV+ D + SK  KV A KE K + E R +  KN
Sbjct: 81  MPTRYTLDLDLKNVVSADAISSKDKKVTALKEAKAKFEERFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. NCBI nr
Match: gi|778695465|ref|XP_004145994.2| (PREDICTED: 60S ribosomal protein L27-3-like [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 4.9e-11
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLKDVVNVDCLQSK SKVAASKEIKKRLE+R +  KN
Sbjct: 81  MPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDRFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. NCBI nr
Match: gi|659129420|ref|XP_008464678.1| (PREDICTED: 60S ribosomal protein L27-3-like [Cucumis melo])

HSP 1 Score: 75.9 bits (185), Expect = 4.9e-11
Identity = 40/46 (86.96%), Postives = 42/46 (91.30%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLKDVVNVDCLQSK SKVAASKEIKKRLE+R +  KN
Sbjct: 81  MPTRYTLDVDLKDVVNVDCLQSKVSKVAASKEIKKRLEDRFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. NCBI nr
Match: gi|778725645|ref|XP_011658974.1| (PREDICTED: 60S ribosomal protein L27-like [Cucumis sativus])

HSP 1 Score: 75.5 bits (184), Expect = 6.4e-11
Identity = 39/46 (84.78%), Postives = 42/46 (91.30%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLKDVVNVDCLQS+ SKV+ASKEIKKRLENR +  KN
Sbjct: 81  MPTRYTLDVDLKDVVNVDCLQSRVSKVSASKEIKKRLENRFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. NCBI nr
Match: gi|702320778|ref|XP_010052670.1| (PREDICTED: 60S ribosomal protein L27-like [Eucalyptus grandis])

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-08
Identity = 35/46 (76.09%), Postives = 37/46 (80.43%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLKDVVN DCLQSK  KV A+KE KKRLE R +  KN
Sbjct: 81  MPTRYTLDVDLKDVVNPDCLQSKDKKVTAAKETKKRLEERFKTGKN 126

[Close]
BLAST of CmaCh09G007070 vs. NCBI nr
Match: gi|658043732|ref|XP_008357506.1| (PREDICTED: 60S ribosomal protein L27-like [Malus domestica])

HSP 1 Score: 66.2 bits (160), Expect = 3.9e-08
Identity = 33/46 (71.74%), Postives = 37/46 (80.43%), Query Frame = 1 

Query: 1   MPTRYTLDVDLKDVVNVDCLQSKGSKVAASKEIKKRLENRRQRDKN 47
           MPTRYTLDVDLKDVVNV+CLQ+K  KV A KE+KKR E R +  KN
Sbjct: 81  MPTRYTLDVDLKDVVNVECLQTKDKKVTALKEVKKRFEERFKTGKN 126

The following BLAST results are available for this feature:
BLAST of CmaCh09G007070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL273_ARATH1.5e-0765.2260S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2[more]
RL27_PEA4.3e-0767.3960S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1[more]
RL272_ARATH1.3e-0660.8760S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2[more]
RL271_ARATH8.1e-0656.5260S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1[more]
BLAST of CmaCh09G007070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L310_CUCSA3.4e-1186.9660S ribosomal protein L27 OS=Cucumis sativus GN=Csa_4G618420 PE=3 SV=1[more]
A0A0A0K3A4_CUCSA4.5e-1184.7860S ribosomal protein L27 OS=Cucumis sativus GN=Csa_7G209560 PE=3 SV=1[more]
Q9MAV8_PANGI1.0e-0771.7460S ribosomal protein L27 OS=Panax ginseng PE=2 SV=1[more]
A0A0A0KVB4_CUCSA3.9e-0771.7460S ribosomal protein L27 OS=Cucumis sativus GN=Csa_4G062360 PE=3 SV=1[more]
A0A0A0KXF9_CUCSA5.1e-0769.5760S ribosomal protein L27 OS=Cucumis sativus GN=Csa_4G061860 PE=3 SV=1[more]
BLAST of CmaCh09G007070 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G15000.18.3e-0965.22 Ribosomal L27e protein family[more]
AT3G22230.17.1e-0860.87 Ribosomal L27e protein family[more]
AT2G32220.14.6e-0756.52 Ribosomal L27e protein family[more]
BLAST of CmaCh09G007070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778695465|ref|XP_004145994.2|4.9e-1186.96PREDICTED: 60S ribosomal protein L27-3-like [Cucumis sativus][more]
gi|659129420|ref|XP_008464678.1|4.9e-1186.96PREDICTED: 60S ribosomal protein L27-3-like [Cucumis melo][more]
gi|778725645|ref|XP_011658974.1|6.4e-1184.78PREDICTED: 60S ribosomal protein L27-like [Cucumis sativus][more]
gi|702320778|ref|XP_010052670.1|1.3e-0876.09PREDICTED: 60S ribosomal protein L27-like [Eucalyptus grandis][more]
gi|658043732|ref|XP_008357506.1|3.9e-0871.74PREDICTED: 60S ribosomal protein L27-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001141Ribosomal_L27e
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G007070.1CmaCh09G007070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001141Ribosomal protein L27ePANTHERPTHR1049760S RIBOSOMAL PROTEIN L27coord: 1..47
score: 3.1
IPR001141Ribosomal protein L27ePFAMPF01777Ribosomal_L27ecoord: 1..47
score: 6.

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G007070Cucurbita maxima (Rimu)cmacmaB054
CmaCh09G007070Cucurbita maxima (Rimu)cmacmaB045
CmaCh09G007070Cucumber (Gy14) v1cgycmaB0076
CmaCh09G007070Cucurbita moschata (Rifu)cmacmoB051
CmaCh09G007070Cucurbita moschata (Rifu)cmacmoB027
CmaCh09G007070Cucurbita moschata (Rifu)cmacmoB041
CmaCh09G007070Wild cucumber (PI 183967)cmacpiB024
CmaCh09G007070Cucumber (Chinese Long) v2cmacuB025
CmaCh09G007070Melon (DHL92) v3.5.1cmameB036
CmaCh09G007070Melon (DHL92) v3.5.1cmameB042
CmaCh09G007070Watermelon (Charleston Gray)cmawcgB016
CmaCh09G007070Watermelon (97103) v1cmawmB038
CmaCh09G007070Cucurbita pepo (Zucchini)cmacpeB048
CmaCh09G007070Cucurbita pepo (Zucchini)cmacpeB055
CmaCh09G007070Cucurbita pepo (Zucchini)cmacpeB060
CmaCh09G007070Bottle gourd (USVL1VR-Ls)cmalsiB025
CmaCh09G007070Cucumber (Gy14) v2cgybcmaB470
CmaCh09G007070Melon (DHL92) v3.6.1cmamedB035
CmaCh09G007070Melon (DHL92) v3.6.1cmamedB042
CmaCh09G007070Silver-seed gourdcarcmaB0432
CmaCh09G007070Cucumber (Chinese Long) v3cmacucB0032
CmaCh09G007070Watermelon (97103) v2cmawmbB021
CmaCh09G007070Wax gourdcmawgoB0028