CmaCh09G006490 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G006490
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_6
Location	Cma_Chr09 : 3088403 .. 3089264 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCCCTTCATTTCTTCTTCTTCTTCTTCCTCCTCCTTCAGAAACCAGAACCGGTTTTTTGTGATTCTGGGTTTGGAAATTAATTAAAAAATGTCTTTGGGGAAGAGATCACGTGCTCCGATGAAACGCACGCCGAGCATGACGGAGATCACCTTCGATCTGGGCAGCTCCGCCACCGACCAATTACCGCCGCCGTCGCTTGGTTACTCAACAATCACCCAAAAAATGGTGTCCCCAAGAAATTACAGACGGCACTCGGTTGATCTACAAGACAACGCTAATTTCCTCAGAGCTTGTTCTCTTTGCACTCGCCCTCTCGTCCCTGGCCGTGATATTTACATGTACAGGTAGATCAATTTAAATCCAATCCGATTTTTAGAATATGGGTTTTGAAAATGGACTCTGTTTTTTCAGGGGAGACAGGGGATTTTGCAGCGACGAATGTAGACAAAAGCAAATGAAACAAGATGAACGAATCGAGAAGTGCAGTTTAGCTTCAAAGAAAGCAGCAGCAGCGGCAGCGGCGGCGGCGGCGGCGGTGGTTGTTTCTAAATCGGTGGCCGTTCAGACCCAGATCTCCGGCAAGGGAGAAACAGTAGCTGCTTCATAGTGGTGATTAATGGATGTCTCTGTTTCCGGCGTTGTATCTGTTCTATGTATGAAGAAAAATTCCCAGAAACTGATGGGTTTTTGGAAATCATTTAATTTTGTTACTTGATTATTGGGATTAATTGGTTTGAGGAAATTAAGATATGAACATTTGATGCGTTGTTGTATTTGAATCTAATCCAACAGTCAACTGTATAATATAATGGAAGAGGGAGGAAGAGGAGGAGTTAAGTCAATGAAAAACCAGCTCCGG

mRNA sequence

CTCCCCTTCATTTCTTCTTCTTCTTCTTCCTCCTCCTTCAGAAACCAGAACCGGTTTTTTGTGATTCTGGGTTTGGAAATTAATTAAAAAATGTCTTTGGGGAAGAGATCACGTGCTCCGATGAAACGCACGCCGAGCATGACGGAGATCACCTTCGATCTGGGCAGCTCCGCCACCGACCAATTACCGCCGCCGTCGCTTGGTTACTCAACAATCACCCAAAAAATGGTGTCCCCAAGAAATTACAGACGGCACTCGGTTGATCTACAAGACAACGCTAATTTCCTCAGAGCTTGTTCTCTTTGCACTCGCCCTCTCGTCCCTGGCCGTGATATTTACATGTACAGGGGAGACAGGGGATTTTGCAGCGACGAATGTAGACAAAAGCAAATGAAACAAGATGAACGAATCGAGAAGTGCAGTTTAGCTTCAAAGAAAGCAGCAGCAGCGGCAGCGGCGGCGGCGGCGGCGGTGGTTGTTTCTAAATCGGTGGCCGTTCAGACCCAGATCTCCGGCAAGGGAGAAACAGTAGCTGCTTCATAGTGGTGATTAATGGATGTCTCTGTTTCCGGCGTTGTATCTGTTCTATGTATGAAGAAAAATTCCCAGAAACTGATGGGTTTTTGGAAATCATTTAATTTTGTTACTTGATTATTGGGATTAATTGGTTTGAGGAAATTAAGATATGAACATTTGATGCGTTGTTGTATTTGAATCTAATCCAACAGTCAACTGTATAATATAATGGAAGAGGGAGGAAGAGGAGGAGTTAAGTCAATGAAAAACCAGCTCCGG

Coding sequence (CDS)

ATGTCTTTGGGGAAGAGATCACGTGCTCCGATGAAACGCACGCCGAGCATGACGGAGATCACCTTCGATCTGGGCAGCTCCGCCACCGACCAATTACCGCCGCCGTCGCTTGGTTACTCAACAATCACCCAAAAAATGGTGTCCCCAAGAAATTACAGACGGCACTCGGTTGATCTACAAGACAACGCTAATTTCCTCAGAGCTTGTTCTCTTTGCACTCGCCCTCTCGTCCCTGGCCGTGATATTTACATGTACAGGGGAGACAGGGGATTTTGCAGCGACGAATGTAGACAAAAGCAAATGAAACAAGATGAACGAATCGAGAAGTGCAGTTTAGCTTCAAAGAAAGCAGCAGCAGCGGCAGCGGCGGCGGCGGCGGCGGTGGTTGTTTCTAAATCGGTGGCCGTTCAGACCCAGATCTCCGGCAAGGGAGAAACAGTAGCTGCTTCATAG

Protein sequence

MSLGKRSRAPMKRTPSMTEITFDLGSSATDQLPPPSLGYSTITQKMVSPRNYRRHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERIEKCSLASKKAAAAAAAAAAAVVVSKSVAVQTQISGKGETVAAS

Homology

[Close]

BLAST of CmaCh09G006490 vs. TrEMBL
Match: A0A0A0KYN7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G378780 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 1.7e-53
Identity = 121/157 (77.07%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLGS--SATDQLPPPSLGYSTITQ-----KMVSPRNYR 60
           MSLGKRSRAP+++TPSMTEITFDLG   SA +Q PP SLGY T TQ     +MVSPRN+R
Sbjct: 1   MSLGKRSRAPIRKTPSMTEITFDLGGTGSAAEQFPP-SLGYPTNTQISGYQQMVSPRNFR 60

Query: 61  RHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERIEKCSLA 120
           RHSVDLQ+NANFLRACSLC+RPLVPGRDIYMYRGDRGFCSDECRQKQMKQDER+EKCSLA
Sbjct: 61  RHSVDLQENANFLRACSLCSRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERMEKCSLA 120

Query: 121 SKKAAAAAAAAAAAVVVSKSVAVQTQISGKGETVAAS 151
           +KKAAA   A     VVS S  V  QISGKGETVAAS
Sbjct: 121 TKKAAAVGVA-----VVSTSAGVPPQISGKGETVAAS 151

[Close]

BLAST of CmaCh09G006490 vs. TrEMBL
Match: A0A0D2SMI9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G044000 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.6e-30
Identity = 89/182 (48.90%), Postives = 106/182 (58.24%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLGSSATDQL-PPPS----------------------- 60
           M LGKR R PMKRT SMTEITFDL ++AT    PPPS                       
Sbjct: 1   MLLGKRPRPPMKRTTSMTEITFDLNTTATTNAEPPPSDPHNPFNNYPKQASPFGGAAPSV 60

Query: 61  ------LGYSTITQKM---VSPRNYRRHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRG 120
                  G   + Q++   VSPR +RRHS D  +  +FLR+C LC R LVPGRDIYMYRG
Sbjct: 61  AVAGGGGGLEGLDQRLLATVSPRVHRRHSADFMETPHFLRSCGLCRRRLVPGRDIYMYRG 120

Query: 121 DRGFCSDECRQKQMKQDERIEKCSLASKKAAAAAAAAAAAVVVSKSVAVQTQISGKGETV 150
           D  FCS ECRQ+QM QDE+ +KCS+ASKK AAA+ AA            ++ +S KGETV
Sbjct: 121 DTAFCSLECRQQQMNQDEKKDKCSIASKKQAAASPAA------------RSSVSTKGETV 170

[Close]

BLAST of CmaCh09G006490 vs. TrEMBL
Match: A0A067K8Y5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11988 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.7e-30
Identity = 85/158 (53.80%), Postives = 101/158 (63.92%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLGSSATDQLPPPSLGYSTITQ--------KMVSPR-N 60
           M LGKR+R P+KRT S++EITFDL ++  +  PP  L    + Q          +SPR  
Sbjct: 1   MLLGKRTRHPIKRTTSLSEITFDLDANGCEAAPPSDLHKQMVGQLDQRLLAAANISPRVT 60

Query: 61  YRRHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERIEKCS 120
           +RR S D  + A+FLRACSLC R LVPGRDIYMYRGD  FCS ECRQ+QM QDER EKCS
Sbjct: 61  HRRASADFLETAHFLRACSLCKRRLVPGRDIYMYRGDSAFCSLECRQQQMNQDERKEKCS 120

Query: 121 LASKKAAAAAAAAAAAVVVSKSVAVQTQISGKGETVAA 150
           LASKK A  + AAA  V+ +           KGETVAA
Sbjct: 121 LASKKQAGVSTAAAQEVIAT-----------KGETVAA 147

[Close]

BLAST of CmaCh09G006490 vs. TrEMBL
Match: B9H760_POPTR (Senescence-associated family protein OS=Populus trichocarpa GN=POPTR_0005s16580g PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-29
Identity = 82/160 (51.25%), Postives = 101/160 (63.12%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLGSSATDQLPPPS-----LGYSTITQKMVS-----PR 60
           M LGKR R PMKRT S+TEI FDL +++++  PP       +GY  +  +  S     PR
Sbjct: 1   MLLGKRPRNPMKRTTSLTEIKFDLNTASSEAAPPSDHPQKQVGYGGMIDQRSSAATGSPR 60

Query: 61  -NYRRHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERIEK 120
            ++RR S D  +  NFLRACSLC R L+PGRDIYMY+GD  FCS ECRQ+QM  DER EK
Sbjct: 61  TSHRRASADFLETPNFLRACSLCKRRLIPGRDIYMYKGDSAFCSQECRQQQMSLDERKEK 120

Query: 121 CSLASKKAAAAAAAAAAAVVVSKSVAVQTQISGKGETVAA 150
           CSLASKK A ++  A             T++S KGETVAA
Sbjct: 121 CSLASKKEAVSSTTA-------------TEVSAKGETVAA 147

[Close]

BLAST of CmaCh09G006490 vs. TrEMBL
Match: A9PJY7_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.0e-29
Identity = 82/160 (51.25%), Postives = 101/160 (63.12%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLGSSATDQLPPPS-----LGYSTITQKMVS-----PR 60
           M LGKR R PMKRT S+TEI FDL +++++  PP       +GY  +  +  S     PR
Sbjct: 1   MLLGKRPRNPMKRTTSLTEIKFDLNTASSEAAPPSDHPQKQVGYGGMIDQRSSAATGSPR 60

Query: 61  -NYRRHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERIEK 120
            ++RR S D  +  NFLRACSLC R L+PGRDIYMY+GD  FCS ECRQ+QM  DER EK
Sbjct: 61  TSHRRASADFLETPNFLRACSLCKRRLIPGRDIYMYKGDSAFCSQECRQQQMSLDERKEK 120

Query: 121 CSLASKKAAAAAAAAAAAVVVSKSVAVQTQISGKGETVAA 150
           CSLASKK A ++  A             T++S KGETVAA
Sbjct: 121 CSLASKKEAVSSTTA-------------TEVSAKGETVAA 147

[Close]

BLAST of CmaCh09G006490 vs. TAIR10
Match: AT1G78020.1 (AT1G78020.1 Protein of unknown function (DUF581))

HSP 1 Score: 107.8 bits (268), Expect = 5.7e-24
Identity = 77/173 (44.51%), Postives = 90/173 (52.02%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLG-----SSATDQLPPPSLGYSTITQ----------- 60
           M LGKR R P+ RT S++EI FDL        +  Q P  +  Y +  Q           
Sbjct: 1   MLLGKRQRPPINRTTSLSEIKFDLNLPSESEPSNQQKPTVASPYGSNGQAVTAAVDQNRG 60

Query: 61  -------KMVSPR-NYRRHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDEC 120
                   MV+PR N RRHS D  D  +FLR+C+LC R LVPGRDIYMYRGD+ FCS EC
Sbjct: 61  FLDQRLLSMVTPRGNLRRHSGDFSDAGHFLRSCALCERLLVPGRDIYMYRGDKAFCSSEC 120

Query: 121 RQKQMKQDERIEKCSLASKKAAAAAAAAAAAVVVSKSVAVQTQISGKGETVAA 150
           RQ+QM QDER EK     K AA A   A  A   +K         GKG   AA
Sbjct: 121 RQEQMAQDERKEK----GKSAAPAKEPAVTAPARAK--------PGKGRAAAA 161

[Close]

BLAST of CmaCh09G006490 vs. TAIR10
Match: AT1G22160.1 (AT1G22160.1 Protein of unknown function (DUF581))

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 64/149 (42.95%), Postives = 80/149 (53.69%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLGSSATDQLPPPSLGYSTITQK--------------M 60
           M LGKR R P+KRT S++EI FDL   +  +     +    + +               M
Sbjct: 1   MLLGKRQRPPIKRTTSLSEIKFDLNQPSEQEPSDHQIQLVNVDEHRQVHQRLLDQRLLAM 60

Query: 61  VSPRN-YRRHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDE 120
           VSPR   RRHS D  ++  FLR+CSLC R LV GRDIYMYRGDR FCS ECRQ+Q+  DE
Sbjct: 61  VSPRGTQRRHSSDYSED--FLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDE 120

Query: 121 RIEKCSLASKKAAAAAAAAAAAVVVSKSV 135
           R EK   + +     A        VS +V
Sbjct: 121 RKEKKKGSVRSTIVVATGTTTGERVSAAV 147

[Close]

BLAST of CmaCh09G006490 vs. TAIR10
Match: AT4G39795.1 (AT4G39795.1 Protein of unknown function (DUF581))

HSP 1 Score: 81.3 bits (199), Expect = 5.7e-16
Identity = 47/113 (41.59%), Postives = 63/113 (55.75%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDL-GSSATDQLPPPSL----GYSTITQKMVSPRNYRRH 60
           M LG R R  M+RT S+T IT ++ G     Q    S+    G     Q+ +SP N++R+
Sbjct: 1   MLLGNRPRPQMQRTASITRITIEVDGDQTAGQDSDVSMTVVDGGENYAQRFLSPVNHQRN 60

Query: 61  SVDL---QDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDE 106
                     ++FL  C  C R L PGRDIYMY+GD  FCS ECR++QM+ DE
Sbjct: 61  ERKYGGRSSPSSFLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQMEHDE 113

[Close]

BLAST of CmaCh09G006490 vs. TAIR10
Match: AT5G65040.1 (AT5G65040.1 Protein of unknown function (DUF581))

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 48/116 (41.38%), Postives = 60/116 (51.72%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLGSSATDQLPPPSLGYSTITQKMVSPRNYRRHSVDLQ 60
           M LGKR  + +KRT SM  IT D  +      P   L   T  Q   +P      + D  
Sbjct: 1   MVLGKRHGSLIKRTTSMKMITLDTPTIYDASQPSDHL---TFHQHPHNPMVVMASNYD-- 60

Query: 61  DNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERIEKCSLASKK 117
              +FL+ CSLC R L   RDIYMYRG+  FCS ECR+KQ+K DE+  K    + K
Sbjct: 61  ---DFLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQIKLDEKKAKTGFVTSK 108

[Close]

BLAST of CmaCh09G006490 vs. TAIR10
Match: AT5G47060.1 (AT5G47060.1 Protein of unknown function (DUF581))

HSP 1 Score: 68.2 bits (165), Expect = 5.0e-12
Identity = 33/71 (46.48%), Postives = 45/71 (63.38%), Query Frame = 1


Query: 39  YSTITQKMVSPRNYRRHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQ 98
           YS  + + V    +     D+Q   +FL +C LC +PL   RDIYMYRGD  FCS+ECRQ
Sbjct: 72  YSVSSPRSVVSGRFHDFRFDIQQ-PHFLDSCFLCKKPLGDNRDIYMYRGDTPFCSEECRQ 131

Query: 99  KQMKQDERIEK 110
           +Q+++DE  EK
Sbjct: 132 EQIERDEAKEK 141

[Close]

BLAST of CmaCh09G006490 vs. NCBI nr
Match: gi|659086772|ref|XP_008444103.1| (PREDICTED: uncharacterized protein LOC103487542 [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 1.9e-53
Identity = 121/157 (77.07%), Postives = 132/157 (84.08%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLGS--SATDQLPPPSLGYSTITQ-----KMVSPRNYR 60
           MSLGKRSRAP+++TPSMTEITFDLG   SA +Q PP SLGY T TQ     +M+SPRN+R
Sbjct: 1   MSLGKRSRAPIRKTPSMTEITFDLGGTGSAAEQFPP-SLGYPTNTQISGYQQMLSPRNFR 60

Query: 61  RHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERIEKCSLA 120
           RHSVDLQ+NANFLRACSLC+RPLVPGRDIYMYRGDRGFCSDECRQKQMKQDER+EKCSLA
Sbjct: 61  RHSVDLQENANFLRACSLCSRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERMEKCSLA 120

Query: 121 SKKAAAAAAAAAAAVVVSKSVAVQTQISGKGETVAAS 151
           +KKAAA A A     VVS S  V  QISGKGETVAAS
Sbjct: 121 TKKAAAVAVA-----VVSTSAGVPPQISGKGETVAAS 151

[Close]

BLAST of CmaCh09G006490 vs. NCBI nr
Match: gi|449465613|ref|XP_004150522.1| (PREDICTED: uncharacterized protein LOC101206644 [Cucumis sativus])

HSP 1 Score: 216.9 bits (551), Expect = 2.5e-53
Identity = 121/157 (77.07%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLGS--SATDQLPPPSLGYSTITQ-----KMVSPRNYR 60
           MSLGKRSRAP+++TPSMTEITFDLG   SA +Q PP SLGY T TQ     +MVSPRN+R
Sbjct: 1   MSLGKRSRAPIRKTPSMTEITFDLGGTGSAAEQFPP-SLGYPTNTQISGYQQMVSPRNFR 60

Query: 61  RHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERIEKCSLA 120
           RHSVDLQ+NANFLRACSLC+RPLVPGRDIYMYRGDRGFCSDECRQKQMKQDER+EKCSLA
Sbjct: 61  RHSVDLQENANFLRACSLCSRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERMEKCSLA 120

Query: 121 SKKAAAAAAAAAAAVVVSKSVAVQTQISGKGETVAAS 151
           +KKAAA   A     VVS S  V  QISGKGETVAAS
Sbjct: 121 TKKAAAVGVA-----VVSTSAGVPPQISGKGETVAAS 151

[Close]

BLAST of CmaCh09G006490 vs. NCBI nr
Match: gi|823237845|ref|XP_012451570.1| (PREDICTED: uncharacterized protein LOC105773915 [Gossypium raimondii])

HSP 1 Score: 140.6 bits (353), Expect = 2.3e-30
Identity = 89/182 (48.90%), Postives = 106/182 (58.24%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLGSSATDQL-PPPS----------------------- 60
           M LGKR R PMKRT SMTEITFDL ++AT    PPPS                       
Sbjct: 1   MLLGKRPRPPMKRTTSMTEITFDLNTTATTNAEPPPSDPHNPFNNYPKQASPFGGAAPSV 60

Query: 61  ------LGYSTITQKM---VSPRNYRRHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRG 120
                  G   + Q++   VSPR +RRHS D  +  +FLR+C LC R LVPGRDIYMYRG
Sbjct: 61  AVAGGGGGLEGLDQRLLATVSPRVHRRHSADFMETPHFLRSCGLCRRRLVPGRDIYMYRG 120

Query: 121 DRGFCSDECRQKQMKQDERIEKCSLASKKAAAAAAAAAAAVVVSKSVAVQTQISGKGETV 150
           D  FCS ECRQ+QM QDE+ +KCS+ASKK AAA+ AA            ++ +S KGETV
Sbjct: 121 DTAFCSLECRQQQMNQDEKKDKCSIASKKQAAASPAA------------RSSVSTKGETV 170

[Close]

BLAST of CmaCh09G006490 vs. NCBI nr
Match: gi|802634626|ref|XP_012078100.1| (PREDICTED: uncharacterized protein LOC105638839 [Jatropha curcas])

HSP 1 Score: 139.8 bits (351), Expect = 3.9e-30
Identity = 85/158 (53.80%), Postives = 101/158 (63.92%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLGSSATDQLPPPSLGYSTITQ--------KMVSPR-N 60
           M LGKR+R P+KRT S++EITFDL ++  +  PP  L    + Q          +SPR  
Sbjct: 1   MLLGKRTRHPIKRTTSLSEITFDLDANGCEAAPPSDLHKQMVGQLDQRLLAAANISPRVT 60

Query: 61  YRRHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERIEKCS 120
           +RR S D  + A+FLRACSLC R LVPGRDIYMYRGD  FCS ECRQ+QM QDER EKCS
Sbjct: 61  HRRASADFLETAHFLRACSLCKRRLVPGRDIYMYRGDSAFCSLECRQQQMNQDERKEKCS 120

Query: 121 LASKKAAAAAAAAAAAVVVSKSVAVQTQISGKGETVAA 150
           LASKK A  + AAA  V+ +           KGETVAA
Sbjct: 121 LASKKQAGVSTAAAQEVIAT-----------KGETVAA 147

[Close]

BLAST of CmaCh09G006490 vs. NCBI nr
Match: gi|224082162|ref|XP_002306588.1| (senescence-associated family protein [Populus trichocarpa])

HSP 1 Score: 137.9 bits (346), Expect = 1.5e-29
Identity = 82/160 (51.25%), Postives = 101/160 (63.12%), Query Frame = 1


Query: 1   MSLGKRSRAPMKRTPSMTEITFDLGSSATDQLPPPS-----LGYSTITQKMVS-----PR 60
           M LGKR R PMKRT S+TEI FDL +++++  PP       +GY  +  +  S     PR
Sbjct: 1   MLLGKRPRNPMKRTTSLTEIKFDLNTASSEAAPPSDHPQKQVGYGGMIDQRSSAATGSPR 60

Query: 61  -NYRRHSVDLQDNANFLRACSLCTRPLVPGRDIYMYRGDRGFCSDECRQKQMKQDERIEK 120
            ++RR S D  +  NFLRACSLC R L+PGRDIYMY+GD  FCS ECRQ+QM  DER EK
Sbjct: 61  TSHRRASADFLETPNFLRACSLCKRRLIPGRDIYMYKGDSAFCSQECRQQQMSLDERKEK 120

Query: 121 CSLASKKAAAAAAAAAAAVVVSKSVAVQTQISGKGETVAA 150
           CSLASKK A ++  A             T++S KGETVAA
Sbjct: 121 CSLASKKEAVSSTTA-------------TEVSAKGETVAA 147

The following BLAST results are available for this feature:

BLAST of CmaCh09G006490 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh09G006490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KYN7_CUCSA	1.7e-53	77.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G378780 PE=4 SV=1	[more]
A0A0D2SMI9_GOSRA	1.6e-30	48.90	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G044000 PE=4 SV=1	[more]
A0A067K8Y5_JATCU	2.7e-30	53.80	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11988 PE=4 SV=1	[more]
B9H760_POPTR	1.0e-29	51.25	Senescence-associated family protein OS=Populus trichocarpa GN=POPTR_0005s16580g...	[more]
A9PJY7_9ROSI	1.0e-29	51.25	Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2...	[more]

BLAST of CmaCh09G006490 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G78020.1	5.7e-24	44.51	Protein of unknown function (DUF581)	[more]
AT1G22160.1	1.1e-19	42.95	Protein of unknown function (DUF581)	[more]
AT4G39795.1	5.7e-16	41.59	Protein of unknown function (DUF581)	[more]
AT5G65040.1	1.2e-13	41.38	Protein of unknown function (DUF581)	[more]
AT5G47060.1	5.0e-12	46.48	Protein of unknown function (DUF581)	[more]

BLAST of CmaCh09G006490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086772\|ref\|XP_008444103.1\|	1.9e-53	77.07	PREDICTED: uncharacterized protein LOC103487542 [Cucumis melo]	[more]
gi\|449465613\|ref\|XP_004150522.1\|	2.5e-53	77.07	PREDICTED: uncharacterized protein LOC101206644 [Cucumis sativus]	[more]
gi\|823237845\|ref\|XP_012451570.1\|	2.3e-30	48.90	PREDICTED: uncharacterized protein LOC105773915 [Gossypium raimondii]	[more]
gi\|802634626\|ref\|XP_012078100.1\|	3.9e-30	53.80	PREDICTED: uncharacterized protein LOC105638839 [Jatropha curcas]	[more]
gi\|224082162\|ref\|XP_002306588.1\|	1.5e-29	51.25	senescence-associated family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007650	Zf-FLZ_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G006490.1	CmaCh09G006490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007650	Zf-FLZ domain	PFAM	PF04570	zf-FLZ	coord: 60..106 score: 1.5
None	No IPR available	PANTHER	PTHR33059	FAMILY NOT NAMED	coord: 46..149 score: 1.4
None	No IPR available	PANTHER	PTHR33059:SF4	F28K19.24-RELATED	coord: 46..149 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G006490	Cla023131	Watermelon (97103) v1	cmawmB036
CmaCh09G006490	Csa4G378780	Cucumber (Chinese Long) v2	cmacuB027
CmaCh09G006490	MELO3C010420	Melon (DHL92) v3.5.1	cmameB043
CmaCh09G006490	ClCG11G015380	Watermelon (Charleston Gray)	cmawcgB014
CmaCh09G006490	CSPI04G18340	Wild cucumber (PI 183967)	cmacpiB026
CmaCh09G006490	CmoCh09G006330	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G006490	CmoCh01G014680	Cucurbita moschata (Rifu)	cmacmoB049
CmaCh09G006490	Lsi04G023500	Bottle gourd (USVL1VR-Ls)	cmalsiB022
CmaCh09G006490	Cp4.1LG02g03450	Cucurbita pepo (Zucchini)	cmacpeB047
CmaCh09G006490	Cp4.1LG06g05090	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G006490	MELO3C010420.2	Melon (DHL92) v3.6.1	cmamedB041
CmaCh09G006490	CsaV3_4G028720	Cucumber (Chinese Long) v3	cmacucB0033
CmaCh09G006490	Cla97C11G221400	Watermelon (97103) v2	cmawmbB019
CmaCh09G006490	Bhi09G002201	Wax gourd	cmawgoB0026
CmaCh09G006490	CsGy4G017430	Cucumber (Gy14) v2	cgybcmaB471
CmaCh09G006490	Carg00365	Silver-seed gourd	carcmaB0934
CmaCh09G006490	Carg03060	Silver-seed gourd	carcmaB0889

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh09G006490	CmaCh01G014180	Cucurbita maxima (Rimu)	cmacmaB053

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G006490	Cucurbita pepo (Zucchini)	cmacpeB055
CmaCh09G006490	Bottle gourd (USVL1VR-Ls)	cmalsiB025
CmaCh09G006490	Cucumber (Gy14) v2	cgybcmaB470
CmaCh09G006490	Melon (DHL92) v3.6.1	cmamedB044
CmaCh09G006490	Cucumber (Chinese Long) v3	cmacucB0032
CmaCh09G006490	Watermelon (97103) v2	cmawmbB021
CmaCh09G006490	Wax gourd	cmawgoB0028
CmaCh09G006490	Cucurbita maxima (Rimu)	cmacmaB045