CmaCh09G005120 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G005120
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Photolyase/blue-light receptor
Location	Cma_Chr09 : 2291467 .. 2296707 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAGAAAAGGATCATGAACACTCTCCGGATCTCATTCTCGTCGTTTCCACTGTTGAAGACACTCCCCAATTCTTCCTCGTTGAAACCGGCCCAAATCGCCGCAAATTCTGCTCACCGTCGAATCTTTGTCATGAATTCTAGCTCGAAGCTTGATTCTAGGTCGTCTTCGTCGTCGATATGTCAAGTTCCGGGGCTAGAATCGGAGGAGATGGACAGGATTGCGGAACAAATGTTCCGGCGGTATGCGTCTCCTTCTTCTTCGAGTGTTAAGAGAGGAAAAGGAGTGGCCATTGTATGGTTCAGAAATGACCTCCGTGTGCTGGACAATGAGGCCCTGTATAAGGCCTGGATTTCGTCAGAGGCTGTGTTGCCGGTGTATTGCGTTGATCCGAGACTTTTTGGTTCTACCTGCTACTTTGGATTTCCTAAAACTGGAGGTTTGTTTCTGAATTTTTTCCTTACTTTAGTGACCGATGATCATGTAATTTGTTCGGAGTTTATATGTTGATTGGCTTGTTGAGCTCTGAATTAAATAGTTTATTGTTCTGTTTCTTGTTATTGATCACGAAACTCTTCTGTTCCGTTATTTTTTTCGTGTAACACTTATTTAGACTAGTTAAGTGTAATGGTGGGAACTATTAGAGGTCTGTTCGTTGCCCGTCGAGTTAGGGCCATGTCTTTTCTTCTTGGACGTAACATTAGTGAGGCGACTTTGGAAGAAATTCATTGCGATGTCGTCATATGATCATGTATTATGCTGGATTTTTCAAAATGTTAAGCTATTAGTTGAATCACTGATTGAGATTTCAGCATTTTGGAATTTATGCTTGTATATGGGGCAGAGCAAGTCTTTCAACGATCCTACAATTCCTTCCTTCCTTGCAGCATTGAGAGCTCAATTTATTGTTGAATGCTTGGCTGATTTGAAAAGGAATTTAATAAACCGAGGTCTTAACTTGCTTATTCAACATGGGAAGCCTGAAGAAATTCTCCCTTCTCTTGCTAAAGCTCTTGGTGCCCACACAGTTGAGTAACTCCAATAGCTTTCCTTGTTTGTTTGAAGGGCTGCTCCAATATGGCTTTTGGTTAAATATCTATTCATTTGATCAGGTCTATGCTCAAATGGAAACTTGTAGTGAGGAACTATACGTTGAAAGAATGGTAAGCAAAGGACTCAAAACAGTGGTGCTATCACCAACCTCAGAGAAGTCTGCCAAGCCAAGCTCTGCTAAAAGCCTTACTTTGCAACTTGTTTGGGGCACCACGATGTACCACATAGATGACCTTCCATTTGATACCAACAGTTTGCCTGATGTCTACACTCAATTTCGTAAAGTACCGTATATTCTCTATATAGTTTTAGGTTCGTTATNCGACGACGGATTTCACCAATCTCGAATCGAACTGAGTTCCTCTCACGGCGGATCCGAACGCGATCTCGCCTTGACCAATCTGCGTAACCTTAATGAAACCTTGCTGATTCCTGGCAGCGCCGCTTGCCTGAAACAGAGTGGTGAGAACGGTAGTATTATCGGAAGACAATCTAGCAAGCTTCTGAGCATCGTAGTAATCGAGAATAACATGAACGCTCAAGATCCTTCTCAGGACGTCCAATGGCTTTCCAGATAGGCCAGAAACGGCGCCGTTGTCGAGGGCGAGGATAGTGATGGTTTTACGGCTGTTAATGTCACCGGCGAGATTTGTTTGTGTGAGGACATCGTTCAAATTATTGAAATCGGGGAACTGGCTTAGGAGCTTAGTGATATTGAAAGCGGAGGCTGCAGAGAAGAGGAGGAAACTCAAAAGCAGGGCGGCGGAAGTGGCTCTGGAATCCATTGTTATTCGGTAATTGTTGATTTTTTTTTTCTTTTTGGTATGATTTTTGTTTTCAATGGGAAACCGATGAGCTTATTGATTTACGATTGAGATTGAGATGGAAAGGGGCTTTTATAGCATGGATTGCTTCAGTTTGTTTGGCTGGGAGTAAAATTCTCACTCGAATTTTCTTTTCCGGGAAAATCTTGAATTAGTTGATAGTTCTTTCAGACTTATTCTTTGAAGCCATAGTGGATCATGCTTTCTTACCGAGGACAAAATCATATCTGCTAACCTAATTTTGATCTTTAGCAACCATTTAATTCTAGTAGTGCTGCCAAGTAAACATACCTGAAAACATGCCAATCATATATTTTGAAGTTAACAAGGGTATCATCGTAGTAATAAGCAGTTTTGTATTGACGAACACAGCGATCACAAGTAGTGAAGCAAATGGACGGGGTGAGAACTGAGAAAGGAAGCAACAAGGATGATGCTCATATTGAAAGAAAAGCTGTGGATGGAAGGATTCTAGCCGGGGATGGTTTCTTCTTCGCCCTCCACCTAAGCTAACTGGAAAAGGCCCAAAGCCAATCACAAAGAACACTGAACGTTCATAGGGTCTTTCTGTATACAGGTGTTGTAGCAGTCCACAGAGTTGATAGGGCATGTTTCGTTTGCTCTTCTTCTTTGGACACGTTTGGCATGGTGCTAGTACCTTGTTCAAAGAAGTTTTTGGTGGGATTGACCCAAAACTTTCACTACTACAATTACCTATATTTGTTTGAATACATAAACTTTTATGCATGATATTTGGAATAAGTTGTGAATACGATTTAGCTATCCTAAATGAATTGAAACAAGAATTTTTGCTAATTAACATACAAATGGGATTCAATTGATTAAAAATAAAATATTGGTAATATGGAAACAAATATGTTTGCTAACTTATATTTTACTAAATTTGAGACAAATATTTTAATGAAAATGTATTGCAAAAATTAGTTAGGGCCCTATAAAGGGATGCCCCATATGCAAAAATGACTTGACATAGAGATAAGATAGTTCATGCCTCATAGTACTAAAACAAAGATATGATCAAGATGTCTCAATTATTAGGCGAGTTTTCCATAAAGTGTCTACGAGATTAGTTAATGACATCTTAAGTCTCGAGATGACACCTGATAAATGGGTTTCCAATGTTATAAGTGTCATGGGTTTTCATGGTGTCGGTAAGTTGTTTTGTAAATGGTTTTCACGGATCAAGTTCCAGATTCGATATGGAACGACTTAGTATTTCTTCATTCATTCTCATCCAATCAAAAACAAAAAAGATTTTTTTTTTTATTGTTCAATGGGTTGATTTCTTGATTCATTGTAAGATAATTAAAATCTTTCTTATCGATTTTTTCAATTTGTTGAAAATTATTACCCCCAGTTTTAGTATTTTTATTACTGTTCGTGTCAGTTTCAATATTGATCCAGGCTCTAATATCGGCCTTATTTTGTTGGTACGTTCTTTTGTAAATGGGTTTTCAAGGACAACACTAGGATTGTCATCCAATCATAGAGGCTAGTATACATACTCGTTATCTAATACGGTATGAAAAATAATACCATAGGTAGGAGTCAGTGAGTTCATGCTTGAATAATACTATCTCATTTTAATAGTTTTTAATAATTAATTTTAATTATGGGAAGAAGAGTAAAGAAAGTAGAAATCTCATTGAAAAAAATTATATATTTTCCGCTCATTGCATTACGCAATTGAGCGGCATACATAATTCAAAATTTTTCAATCTTTAAAGCATAACCGCATTGGCTTCTTGAACTCACAGAGCCAGAAACACCGAGATCACAGCCATAACAGCCGCAGCTCCGATGAAGCTACCGCGTGAGGCGCCGGATTCATCGCTAGGTGCTGGAGCAGCCGCATCATCATCACCGTCGGCTGCTTTCGGTGGAGACCTTGCCGGCGAATCGGCAACAACCTTCGGTTTTTTGGCGGGAGGAGCCCTAGCCTTTGACGGAGTCTTAGCGGAAGGAGCCGGTGCCTTTTTAGGTGATCCGACGGGAGAAAACGACGACGGTGGTGGTGGTGTTGGAGAGGAGCGAGGTGGCTTGGCATCGATTCCAGGAACCTGAATCGGAGATGAGATCTGAAGAACACAGATATTGTACGGCTGTGCGACGACGGATTTCACCAATCTCGAATCGAACTGAGTTCCTCTCACGGCGGATCCGAACGCGATCTCACCTTGACCATTCTGCGTAACCTTGATGAAACCTTGCTGATTCCTGGCAGCGCCGCTTGCCTGAAACAGAGTGGTGAGAACAGTAGTATTATCGGAAGACAATCTAGCAAGCTTCTGAGCATCGTAGTAATCGAGAATAACATGAACGCTCAAGATCCTTCTCAGAACGTCCAACGGCTTTCCAGATAGGCCAGAAACGGCGCTGTTGTCGAGGGCGAGGATAGTGATGGTTCTACGGCTGTTAATTTCACCGGCGAGATTTGTTTGTGTGAGGAAATCATTCAAACTATTGAAATCGGGGAACTGGCTTAGGAGATTAGTGATATTGAAAGCGGAGGCTGCAGAGAAGAGGAGGAAACTCAAAATCAGGGCAGCGGAAATGGCTCTGGAATCCATTGTTATTCGGTAATTGTTGATTCTCTTTTTGGTATGATTTTTGTTTTCAATGGGAAACCGATGAGCTTATTGATTTACGATTGAAATTGAGATGGAAGGGGGCTTTTAAAGCATGGATTGATTTAGTTTGTTTGGCTGGGAGTAAAATTCTCACTGGAATTTTCTTTTCCGGGAAAATCTTGAATTAGCATTAGAAATCCTTTGGAGTTCCTTGATTCTGAAAATTAATTACTAAATATAGTATAAATTTTCCTCTGTTCTTGGCTTCAAGCTAGAATGTTGTGCATTTAAACTGAAAAAGGGCGGGAATGTTGTGCATTTACCATTTTACCCCGTACATGAAAATCCGATTCAAACTGAAAAAAGGGAGGGAACGGTGAGATTATGTGCGTGTGTATATATAAACCAAGTTAGAAAGCTAACTTATAATATATTTAGAATATATTTCTATTATTTTTTTATGTGCTAAATATTATTGGATTTATTAAGCTACTCTAGCGATAAAGATTGAAAACCGTAGTTGAAATGAAAACAAATAGCTTTCTCATCCTTGTCTTGCCTCGTTCTCTATGCTTATCTTGCCTCGGGAACATCTTTGAGTTGAAAGTAAATATTGAATCAAAATGTGAACTTGGTTTATAATGACGAGAGAGCAAATTCTGACCGTTCCCAAATTCAATTTAATTAGATGGAATTCTACGTCTTCCCGATAGAAATGCTGACCCAATGGAAAAAAAATTACATAAAAGGTAAACGTGGTTGTAAGGTATAA

mRNA sequence

AAAAAAGAAAAGGATCATGAACACTCTCCGGATCTCATTCTCGTCGTTTCCACTGTTGAAGACACTCCCCAATTCTTCCTCGTTGAAACCGGCCCAAATCGCCGCAAATTCTGCTCACCGTCGAATCTTTGTCATGAATTCTAGCTCGAAGCTTGATTCTAGGTCGTCTTCGTCGTCGATATGTCAAGTTCCGGGGCTAGAATCGGAGGAGATGGACAGGATTGCGGAACAAATGTTCCGGCGGTATGCGTCTCCTTCTTCTTCGAGTGTTAAGAGAGGAAAAGGAGTGGCCATTGTATGGTTCAGAAATGACCTCCGTGTGCTGGACAATGAGGCCCTGTATAAGGCCTGGATTTCGTCAGAGGCTGTGTTGCCGGTGTATTGCGTTGATCCGAGACTTTTTGGTTCTACCTGCTACTTTGGATTTCCTAAAACTGGAGCATTGAGAGCTCAATTTATTGTTGAATGCTTGGCTGATTTGAAAAGGAATTTAATAAACCGAGGTCTTAACTTGCTTATTCAACATGGGAAGCCTGAAGAAATTCTCCCTTCTCTTGCTAAAGCTCTTGGTGCCCACACAGTCTATGCTCAAATGGAAACTTGTAGTGAGGAACTATACGTTGAAAGAATGGTAAGCAAAGGACTCAAAACAGTGGTGCTATCACCAACCTCAGAGAAGTCTGCCAAGCCAAGCTCTGCTAAAAGCCTTACTTTGCAACTTGTTTGGGGCACCACGATGTACCACATAGATGACCTTCCATTTGATACCAACAGTTTGCCTGATGTCTACACTCAATTTCGTAAAGTACCGTATATTCTCTATATAGTTTTAGGTTCGTTATNCGACGACGGATTTCACCAATCTCGAATCGAACTGAGTTCCTCTCACGGCGGATCCGAACGCGATCTCGCCTTGACCAATCTGCGTAACCTTAATGAAACCTTGCTGATTCCTGGCAGCGCCGCTTGCCTGAAACAGAGTGGTGAGAACGGTAGTATTATCGGAAGACAATCTAGCAAGCTTCTGAGCATCGTAATCCTTCTCAGGACGTCCAATGGCTTTCCAGATAGGCCAGAAACGGCGCCGTTGTCGAGGGCGAGGATAGTGATGGTTTTACGGCTGTTAATGTCACCGGCGAGATTTGTTTGTGTGAGGACATCGTTCAAATTATTGAAATCGGGGAACTGGCTTAGGAGCTTAGTGATATTGAAAGCGGAGGCTGCAGAGAAGAGGAGGAAACTCAAAAGCAGGGCGGCGGAAGTGGCTCTGGAATCCATTCGATCACAAGTAGTGAAGCAAATGGACGGGGTGAGAACTGAGAAAGGAAGCAACAAGGATGATGCTCATATTGAAAGAAAAGCTGTGGATGGAAGGATTCTAGCCGGGGATGGTGTTGTAGCAGTCCACAGAGTTGATAGGGCATGTTTCGTTTGCTCTTCTTCTTTGGACACGCGAGTTTTCCATAAAGTGTCTACGAGATTAGTTAATGACATCTTAAGTCTCGAGATGACACCTGATAAATGGGTTTCCAATGTTATAAGTGTCATGGGTTTTCATGGTGTCGGTAAAGCCAGAAACACCGAGATCACAGCCATAACAGCCGCAGCTCCGATGAAGCTACCGCGTGAGGCGCCGGATTCATCGCTAGGTGCTGGAGCAGCCGCATCATCATCACCGTCGGCTGCTTTCGGTGGAGACCTTGCCGGCGAATCGGCAACAACCTTCGGTTTTTTGGCGGGAGGAGCCCTAGCCTTTGACGGAGTCTTAGCGGAAGGAGCCGGTGCCTTTTTAGGTGATCCGACGGGAGAAAACGACGACGGTGGTGGTGGTGTTGGAGAGGAGCGAGATATTGTACGGCTGTGCGACGACGGATTTCACCAATCTCGAATCGAACTGAGTTCCTCTCACGGCGGATCCGAACGCGATCTCACCTTGACCATTCTGCGTAACCTTGATGAAACCTTGCTGATTCCTGGCAGCGCCGCTTGCCTGAAACAGAGTGGTGAGAACAGTAGTATTATCGGAAGACAATCTAGCAAGCTTCTGAGCATCGTAATCCTTCTCAGAACGTCCAACGGCTTTCCAGATAGGCCAGAAACGGCGCTGTTGTCGAGGGCGAGGATAGTGATGGTTCTACGGCTGTTAATTTCACCGGCGAGATTTGTTTGTGTGAGGAAATCATTCAAACTATTGAAATCGGGGAACTGGCTTAGGAGATTAGTGATATTGAAAGCGGAGGCTGCAGAGAAGAGGAGGAAACTCAAAATCAGGGCAGCGGAAATGGCTCTGGAATCCATTTATAAATTTTCCTCTGTTCTTGGCTTCAAGCTAGAATGTTGTGCATTTAAACTGAAAAAGGGCGGGAATGTTGTGCATTTACCATTTTACCCCGTACATGAAAATCCGATTCAAACTGAAAAAAGGGAGGGAACGATGGAATTCTACGTCTTCCCGATAGAAATGCTGACCCAATGGAAAAAAAATTACATAAAAGGTAAACGTGGTTGTAAGGTATAA

Coding sequence (CDS)

ATGAACACTCTCCGGATCTCATTCTCGTCGTTTCCACTGTTGAAGACACTCCCCAATTCTTCCTCGTTGAAACCGGCCCAAATCGCCGCAAATTCTGCTCACCGTCGAATCTTTGTCATGAATTCTAGCTCGAAGCTTGATTCTAGGTCGTCTTCGTCGTCGATATGTCAAGTTCCGGGGCTAGAATCGGAGGAGATGGACAGGATTGCGGAACAAATGTTCCGGCGGTATGCGTCTCCTTCTTCTTCGAGTGTTAAGAGAGGAAAAGGAGTGGCCATTGTATGGTTCAGAAATGACCTCCGTGTGCTGGACAATGAGGCCCTGTATAAGGCCTGGATTTCGTCAGAGGCTGTGTTGCCGGTGTATTGCGTTGATCCGAGACTTTTTGGTTCTACCTGCTACTTTGGATTTCCTAAAACTGGAGCATTGAGAGCTCAATTTATTGTTGAATGCTTGGCTGATTTGAAAAGGAATTTAATAAACCGAGGTCTTAACTTGCTTATTCAACATGGGAAGCCTGAAGAAATTCTCCCTTCTCTTGCTAAAGCTCTTGGTGCCCACACAGTCTATGCTCAAATGGAAACTTGTAGTGAGGAACTATACGTTGAAAGAATGGTAAGCAAAGGACTCAAAACAGTGGTGCTATCACCAACCTCAGAGAAGTCTGCCAAGCCAAGCTCTGCTAAAAGCCTTACTTTGCAACTTGTTTGGGGCACCACGATGTACCACATAGATGACCTTCCATTTGATACCAACAGTTTGCCTGATGTCTACACTCAATTTCGTAAAGTACCGTATATTCTCTATATAGTTTTAGGTTCGTTATNCGACGACGGATTTCACCAATCTCGAATCGAACTGAGTTCCTCTCACGGCGGATCCGAACGCGATCTCGCCTTGACCAATCTGCGTAACCTTAATGAAACCTTGCTGATTCCTGGCAGCGCCGCTTGCCTGAAACAGAGTGGTGAGAACGGTAGTATTATCGGAAGACAATCTAGCAAGCTTCTGAGCATCGTAATCCTTCTCAGGACGTCCAATGGCTTTCCAGATAGGCCAGAAACGGCGCCGTTGTCGAGGGCGAGGATAGTGATGGTTTTACGGCTGTTAATGTCACCGGCGAGATTTGTTTGTGTGAGGACATCGTTCAAATTATTGAAATCGGGGAACTGGCTTAGGAGCTTAGTGATATTGAAAGCGGAGGCTGCAGAGAAGAGGAGGAAACTCAAAAGCAGGGCGGCGGAAGTGGCTCTGGAATCCATTCGATCACAAGTAGTGAAGCAAATGGACGGGGTGAGAACTGAGAAAGGAAGCAACAAGGATGATGCTCATATTGAAAGAAAAGCTGTGGATGGAAGGATTCTAGCCGGGGATGGTGTTGTAGCAGTCCACAGAGTTGATAGGGCATGTTTCGTTTGCTCTTCTTCTTTGGACACGCGAGTTTTCCATAAAGTGTCTACGAGATTAGTTAATGACATCTTAAGTCTCGAGATGACACCTGATAAATGGGTTTCCAATGTTATAAGTGTCATGGGTTTTCATGGTGTCGGTAAAGCCAGAAACACCGAGATCACAGCCATAACAGCCGCAGCTCCGATGAAGCTACCGCGTGAGGCGCCGGATTCATCGCTAGGTGCTGGAGCAGCCGCATCATCATCACCGTCGGCTGCTTTCGGTGGAGACCTTGCCGGCGAATCGGCAACAACCTTCGGTTTTTTGGCGGGAGGAGCCCTAGCCTTTGACGGAGTCTTAGCGGAAGGAGCCGGTGCCTTTTTAGGTGATCCGACGGGAGAAAACGACGACGGTGGTGGTGGTGTTGGAGAGGAGCGAGATATTGTACGGCTGTGCGACGACGGATTTCACCAATCTCGAATCGAACTGAGTTCCTCTCACGGCGGATCCGAACGCGATCTCACCTTGACCATTCTGCGTAACCTTGATGAAACCTTGCTGATTCCTGGCAGCGCCGCTTGCCTGAAACAGAGTGGTGAGAACAGTAGTATTATCGGAAGACAATCTAGCAAGCTTCTGAGCATCGTAATCCTTCTCAGAACGTCCAACGGCTTTCCAGATAGGCCAGAAACGGCGCTGTTGTCGAGGGCGAGGATAGTGATGGTTCTACGGCTGTTAATTTCACCGGCGAGATTTGTTTGTGTGAGGAAATCATTCAAACTATTGAAATCGGGGAACTGGCTTAGGAGATTAGTGATATTGAAAGCGGAGGCTGCAGAGAAGAGGAGGAAACTCAAAATCAGGGCAGCGGAAATGGCTCTGGAATCCATTTATAAATTTTCCTCTGTTCTTGGCTTCAAGCTAGAATGTTGTGCATTTAAACTGAAAAAGGGCGGGAATGTTGTGCATTTACCATTTTACCCCGTACATGAAAATCCGATTCAAACTGAAAAAAGGGAGGGAACGATGGAATTCTACGTCTTCCCGATAGAAATGCTGACCCAATGGAAAAAAAATTACATAAAAGGTAAACGTGGTTGTAAGGTATAA

Protein sequence

MNTLRISFSSFPLLKTLPNSSSLKPAQIAANSAHRRIFVMNSSSKLDSRSSSSSICQVPGLESEEMDRIAEQMFRRYASPSSSSVKRGKGVAIVWFRNDLRVLDNEALYKAWISSEAVLPVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKPEEILPSLAKALGAHTVYAQMETCSEELYVERMVSKGLKTVVLSPTSEKSAKPSSAKSLTLQLVWGTTMYHIDDLPFDTNSLPDVYTQFRKVPYILYIVLGSLXDDGFHQSRIELSSSHGGSERDLALTNLRNLNETLLIPGSAACLKQSGENGSIIGRQSSKLLSIVILLRTSNGFPDRPETAPLSRARIVMVLRLLMSPARFVCVRTSFKLLKSGNWLRSLVILKAEAAEKRRKLKSRAAEVALESIRSQVVKQMDGVRTEKGSNKDDAHIERKAVDGRILAGDGVVAVHRVDRACFVCSSSLDTRVFHKVSTRLVNDILSLEMTPDKWVSNVISVMGFHGVGKARNTEITAITAAAPMKLPREAPDSSLGAGAAASSSPSAAFGGDLAGESATTFGFLAGGALAFDGVLAEGAGAFLGDPTGENDDGGGGVGEERDIVRLCDDGFHQSRIELSSSHGGSERDLTLTILRNLDETLLIPGSAACLKQSGENSSIIGRQSSKLLSIVILLRTSNGFPDRPETALLSRARIVMVLRLLISPARFVCVRKSFKLLKSGNWLRRLVILKAEAAEKRRKLKIRAAEMALESIYKFSSVLGFKLECCAFKLKKGGNVVHLPFYPVHENPIQTEKREGTMEFYVFPIEMLTQWKKNYIKGKRGCKV

Homology

[Close]

BLAST of CmaCh09G005120 vs. Swiss-Prot
Match: CRYD_SOLLC (Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum GN=CRYD PE=2 SV=2)

HSP 1 Score: 296.6 bits (758), Expect = 8.6e-79
Identity = 148/228 (64.91%), Postives = 178/228 (78.07%), Query Frame = 1


Query: 38  FVMNSSSKLDSRSSSSS--ICQVPGLESEEMDRIAEQMFRRYASPSSSSVKRGKGVAIVW 97
           F  N S K+ S ++ ++  +  VPGL  EEM+R+ EQ F+RY S      ++GKGVAIVW
Sbjct: 25  FHCNFSIKMASLTARTTPTVQNVPGLTPEEMERVCEQTFQRYESGGLGK-RKGKGVAIVW 84

Query: 98  FRNDLRVLDNEALYKAWISSEAVLPVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADL 157
           FRNDLRVLDNEAL +AW+SSEA+LPVYCVDPRLFG+T YFG PKTGALRAQFI+ECL DL
Sbjct: 85  FRNDLRVLDNEALLRAWVSSEAILPVYCVDPRLFGTTHYFGMPKTGALRAQFIIECLNDL 144

Query: 158 KRNLINRGLNLLIQHGKPEEILPSLAKALGAHTVYAQMETCSEELYVERMVSKGLKTVVL 217
           KRNL+ RGL+LLIQHGKPE+I+PSLAKA  AHTVYA  ETCSEE+ VE+MV++ L+ +V 
Sbjct: 145 KRNLVKRGLDLLIQHGKPEDIVPSLAKAYKAHTVYAHKETCSEEVKVEKMVTRNLQKLVS 204

Query: 218 SPTSEKSAKPSSAKSLTLQLVWGTTMYHIDDLPFDTNSLPDVYTQFRK 264
             +      P S  +  L+LVWG+TMYHIDDLPFD  SLPDVYTQFRK
Sbjct: 205 PSSGGIGNDPGSGNTTKLELVWGSTMYHIDDLPFDCESLPDVYTQFRK 251

[Close]

BLAST of CmaCh09G005120 vs. Swiss-Prot
Match: CRYD_ORYSJ (Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica GN=CRYD PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 9.2e-73
Identity = 151/260 (58.08%), Postives = 183/260 (70.38%), Query Frame = 1


Query: 13  LLKTLPNSSSLKPA--QIAANSAHRRIFVMNSSSKLDSRSSSSS-----ICQVPGLESEE 72
           +L  L +SS L P    +   SA  R+ +    S + S SSSSS        VP L ++E
Sbjct: 1   MLHFLSSSSPLNPQFLLLPRQSARLRVLLSIPVSAMSSSSSSSSRGALAAAAVPSLSADE 60

Query: 73  MDRIAEQMFRRYASPSSSSVKRGKGVAIVWFRNDLRVLDNEALYKAWISSEAVLPVYCVD 132
               A++ F RY SPS      G GVAIVWFRNDLRVLDNEA+ +AW +S+AVLPVYCVD
Sbjct: 61  AGAAADEAFLRYTSPSMRR-SGGGGVAIVWFRNDLRVLDNEAVVRAWAASDAVLPVYCVD 120

Query: 133 PRLF-GSTCYFGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKPEEILPSLAKAL 192
           PR+  GST YFGFPKTGALRAQF++ECL DLKRNL  +GL+LLI+HGKPE+ILPS+AKA+
Sbjct: 121 PRISAGSTHYFGFPKTGALRAQFLIECLEDLKRNLTKQGLDLLIRHGKPEDILPSIAKAV 180

Query: 193 GAHTVYAQMETCSEELYVERMVSKGLKTVVL-SPTSEKSAKPSSAKSLTLQLVWGTTMYH 252
            AHTVYA  ETCSEEL VE +V KGL+ VV+    +    KP + K   LQL+WG T+YH
Sbjct: 181 TAHTVYAHKETCSEELLVEHLVRKGLEQVVIPQGGASNQKKPRNPK---LQLIWGATLYH 240

Query: 253 IDDLPFDTNSLPDVYTQFRK 264
           +DDLPF  N+LPDVYTQFRK
Sbjct: 241 VDDLPFSVNNLPDVYTQFRK 256

[Close]

BLAST of CmaCh09G005120 vs. Swiss-Prot
Match: CRYD_ARATH (Cryptochrome DASH, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CRYD PE=1 SV=2)

HSP 1 Score: 268.9 bits (686), Expect = 1.9e-70
Identity = 145/255 (56.86%), Postives = 174/255 (68.24%), Query Frame = 1


Query: 20  SSSLKPAQIAANSAHRRIFVMNSSSKLDSRSSSSSIC----------QVPGLESEEMDRI 79
           +SSL  +   +N   R        SK    SSS  +C          +VP L  EE+D +
Sbjct: 3   ASSLSLSSPLSNPLRRFTLHHLHLSKKPLSSSSLFLCSAAKMNDHIHRVPALTEEEIDSV 62

Query: 80  AEQMFRRYASPSSSSVKR-GKGVAIVWFRNDLRVLDNEALYKAWISSEAVLPVYCVDPRL 139
           A + F RYA PSSSSVKR GKGV I+WFRNDLRVLDN+ALYKAW SS+ +LPVYC+DPRL
Sbjct: 63  AIKTFERYALPSSSSVKRKGKGVTILWFRNDLRVLDNDALYKAWSSSDTILPVYCLDPRL 122

Query: 140 FGSTCYFGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKPEEILPSLAKALGAHT 199
           F +T +F FPKTGALR  F++ECL DL++NL+ RGLNLLI+ GKPEEILPSLAK  GA T
Sbjct: 123 FHTTHFFNFPKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSGKPEEILPSLAKDFGART 182

Query: 200 VYAQMETCSEELYVERMVSKGLKTVVLSPTSEKSAKPSSAKSLTLQLVWGTTMYHIDDLP 259
           V+A  ETCSEE+ VER+V++GLK V                S  L+L+WG+TMYH DDLP
Sbjct: 183 VFAHKETCSEEVDVERLVNQGLKRV--------------GNSTKLELIWGSTMYHKDDLP 242

Query: 260 FDTNSLPDVYTQFRK 264
           FD   LPDVYTQFRK
Sbjct: 243 FDVFDLPDVYTQFRK 243

[Close]

BLAST of CmaCh09G005120 vs. Swiss-Prot
Match: PHR2_ARATH (Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 2.2e-34
Identity = 79/188 (42.02%), Postives = 109/188 (57.98%), Query Frame = 1


Query: 75  RRYASPSSSSVKRGKGVAIVWFRNDLRVLDNEALYKAWISSEAVLPVYCVDPRLFGSTCY 134
           RR   PSS++  R    A+VWFRNDLRV DNE L  A     +VLPVYC DPR +G +  
Sbjct: 102 RRPVDPSSAAALRR--AAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSS 161

Query: 135 FGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKPEEILPSLAKALGAHTVYAQME 194
            GF KTG  RAQF++E +++L++NL  RG NL+++ GKPE +L  LAK +GA  VYA  E
Sbjct: 162 -GFDKTGPFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHRE 221

Query: 195 TCSEELYVERMVSKGLKTVVLSPTSEKSAKPSSAKSLTLQLVWGTTMYHIDDLPFDTNSL 254
              +E+  E  +   +K                 + + ++  WG+T+YH+DDLPF    L
Sbjct: 222 VSHDEVKAEGKIETAMK----------------EEGVEVKYFWGSTLYHLDDLPFKIEDL 270

Query: 255 PDVYTQFR 263
           P  Y  F+
Sbjct: 282 PSNYGAFK 270

[Close]

BLAST of CmaCh09G005120 vs. Swiss-Prot
Match: CRYD_GLOVI (Cryptochrome DASH OS=Gloeobacter violaceus (strain PCC 7421) GN=cry PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.3e-30
Identity = 70/171 (40.94%), Postives = 101/171 (59.06%), Query Frame = 1


Query: 93  IVWFRNDLRVLDNEALYKAWISSEAVLPVYCVDPRLFGSTCYFGFPKTGALRAQFIVECL 152
           +VW+RNDLRV D+E L  A   +  V+ +YC DPR FG    FGF KTG  RA+F++E +
Sbjct: 7   LVWYRNDLRVHDHEPLTSALHKNARVVALYCFDPRQFGKAP-FGFEKTGPFRARFLLESV 66

Query: 153 ADLKRNLINRGLNLLIQHGKPEEILPSLAKALGAHTVYAQMETCSEELYVERMVSKGLKT 212
           ADL+R+L   G +LL++ G PEE++P+L   L    V+   E  SEEL VER +   L  
Sbjct: 67  ADLRRSLRQLGSDLLVRRGHPEEVIPALVSELEIAAVHYHGEVTSEELVVERDLQAALAP 126

Query: 213 VVLSPTSEKSAKPSSAKSLTLQLVWGTTMYHIDDLPFDTNSLPDVYTQFRK 264
           +                ++ ++  WGTT+ H DDLPF   ++P+++T FRK
Sbjct: 127 L----------------NVPVRSFWGTTLVHPDDLPFAIEAIPELFTDFRK 160

[Close]

BLAST of CmaCh09G005120 vs. TrEMBL
Match: A0A0A0LEG3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881660 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.3e-121
Identity = 234/266 (87.97%), Postives = 241/266 (90.60%), Query Frame = 1


Query: 2   NTLRISFSSFPLLKTLPNSSSLKPA-QIAANSAHRRIFVMNSSSKLDSRS-SSSSICQVP 61
           NTLR S +S PLLKTLPN SSLKP   IA  SA RRIFVMNSSSKLDSRS SSSS CQVP
Sbjct: 4   NTLRSSLTSLPLLKTLPNYSSLKPVIHIAVKSASRRIFVMNSSSKLDSRSPSSSSTCQVP 63

Query: 62  GLESEEMDRIAEQMFRRYASPSSSSVKRGKGVAIVWFRNDLRVLDNEALYKAWISSEAVL 121
           GLESEEMDR+ EQMFRRY+S  SS  KRGKGVAIVWFRNDLRVLDNEAL KAWISSEAVL
Sbjct: 64  GLESEEMDRVVEQMFRRYSS--SSGFKRGKGVAIVWFRNDLRVLDNEALNKAWISSEAVL 123

Query: 122 PVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKPEEILPS 181
           PVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNL  RGLNLLIQHGKPEEILPS
Sbjct: 124 PVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNLTKRGLNLLIQHGKPEEILPS 183

Query: 182 LAKALGAHTVYAQMETCSEELYVERMVSKGLKTVVLSPTSEK--SAKPSSAKSLTLQLVW 241
           LAKALGAHTV+AQMETCSEELYVE+MVSKGLKTVVLSPTSEK  SAK S+A+S T QLVW
Sbjct: 184 LAKALGAHTVFAQMETCSEELYVEKMVSKGLKTVVLSPTSEKSASAKSSAARSPTFQLVW 243

Query: 242 GTTMYHIDDLPFDTNSLPDVYTQFRK 264
           GTTMYHIDDLPFDTNSLPDVYTQFRK
Sbjct: 244 GTTMYHIDDLPFDTNSLPDVYTQFRK 267

[Close]

BLAST of CmaCh09G005120 vs. TrEMBL
Match: M5XBF8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003875mg PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.7e-86
Identity = 168/225 (74.67%), Postives = 192/225 (85.33%), Query Frame = 1


Query: 40  MNSSSKLDSRSSSSSICQVPGLESEEMDRIAEQMFRRYASPSSSSVKR-GKGVAIVWFRN 99
           M+SSSK     SS+ + +VPGL+ E+MDR+A+Q F+RY   S+S VKR GKGVA+VWFRN
Sbjct: 1   MSSSSK---SQSSAPVYKVPGLDPEDMDRVADQTFQRY---SASPVKRNGKGVAVVWFRN 60

Query: 100 DLRVLDNEALYKAWISSEAVLPVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRN 159
           DLRVLDNEALYKAWISS+ VL VYCVDPRLFGST YFGFPKTGALRAQF++ECLADLK+N
Sbjct: 61  DLRVLDNEALYKAWISSQEVLGVYCVDPRLFGSTHYFGFPKTGALRAQFLIECLADLKKN 120

Query: 160 LINRGLNLLIQHGKPEEILPSLAKALGAHTVYAQMETCSEELYVERMVSKGLKTVVLSPT 219
           L+ RGLNLLIQHGKPEEILPSLA+  GAHTVYAQ ETCSEEL VER+V KGL+ VVL  +
Sbjct: 121 LMKRGLNLLIQHGKPEEILPSLAEVFGAHTVYAQKETCSEELNVERLVRKGLQRVVLPLS 180

Query: 220 SEKSAKPSSAKSLTLQLVWGTTMYHIDDLPFDTNSLPDVYTQFRK 264
           S +S+ PSS  +  LQL+WGTTMYHIDDLPFDT SLPDVYTQFRK
Sbjct: 181 SAQSSGPSSTNNPKLQLLWGTTMYHIDDLPFDTLSLPDVYTQFRK 219

[Close]

BLAST of CmaCh09G005120 vs. TrEMBL
Match: W9RSE2_9ROSA (Cryptochrome DASH OS=Morus notabilis GN=L484_004414 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.3e-85
Identity = 177/259 (68.34%), Postives = 199/259 (76.83%), Query Frame = 1


Query: 7   SFSSFPLLKTLPN--SSSLKPAQIAANSAHRRIFVMNSSSKLDSRS-SSSSICQVPGLES 66
           S S  PL K+LP      LKP      S   R   M S S  DS   SS++I +VP   +
Sbjct: 12  SLSLLPLRKSLPGPCDPKLKPYI----SIFSRFSTMASISGSDSVGPSSAAIDEVPETGA 71

Query: 67  EEMDRIAEQMFRRYASPSSSSVKR-GKGVAIVWFRNDLRVLDNEALYKAWISSEAVLPVY 126
           ++MDRI +  FRRY+S SSS  KR G GVAIVWFRNDLRVLDNEALYKAWISS  VLPVY
Sbjct: 72  DQMDRIFDLTFRRYSSSSSSPAKRNGNGVAIVWFRNDLRVLDNEALYKAWISSREVLPVY 131

Query: 127 CVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKPEEILPSLAK 186
           CVDPRLFGST YFGFPKTGALRAQF++ECLADL++NL+ RGLNLLIQHGKPEEILP+LAK
Sbjct: 132 CVDPRLFGSTYYFGFPKTGALRAQFLMECLADLQKNLMKRGLNLLIQHGKPEEILPTLAK 191

Query: 187 ALGAHTVYAQMETCSEELYVERMVSKGLKTVVLSPTSEKSAKPSSAKSLTLQLVWGTTMY 246
            LGAHTVYAQ ETCSEEL VE +VSKGL+ VVL  +S ++ +PSS K+  L LVWGTTMY
Sbjct: 192 TLGAHTVYAQKETCSEELNVETLVSKGLQKVVLQSSSGQTNRPSSTKNPKLHLVWGTTMY 251

Query: 247 HIDDLPFDTNSLPDVYTQF 262
           HIDDLPF  NSLPDVYTQF
Sbjct: 252 HIDDLPFYANSLPDVYTQF 266

[Close]

BLAST of CmaCh09G005120 vs. TrEMBL
Match: A0A067KBB8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07003 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 5.6e-85
Identity = 173/267 (64.79%), Postives = 202/267 (75.66%), Query Frame = 1


Query: 1   MNTLRISFSSFPLLKTLPNSSSLKPAQIAANSAHRRIFV---MNSSSKLDSRSSSSSICQ 60
           M  L  S SS  L K +  S  +        +AH ++ +   MNSSS     SSS+  CQ
Sbjct: 1   MAGLYSSISSLSLKKLIQPSQRISTLTYPILTAHSKLCIRQIMNSSSS----SSSTLTCQ 60

Query: 61  VPGLESEEMDRIAEQMFRRYASPSSSSVKR-GKGVAIVWFRNDLRVLDNEALYKAWISSE 120
           VP L+S+EMDRIA+  F RY   SS  VKR GKG AIVWFRNDLRVLDNEAL+ AW+SSE
Sbjct: 61  VPALDSDEMDRIADHTFDRY---SSKIVKRVGKGTAIVWFRNDLRVLDNEALFMAWVSSE 120

Query: 121 AVLPVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKPEEI 180
           AVLPVYCVDPRLF +T +FGFPKTGALRAQFI+ECLADL++NL+ +GLNLLI+HGKPEEI
Sbjct: 121 AVLPVYCVDPRLFQTTYHFGFPKTGALRAQFIIECLADLRKNLMKKGLNLLIRHGKPEEI 180

Query: 181 LPSLAKALGAHTVYAQMETCSEELYVERMVSKGLKTVVLSPTSEKSAKPSSAKSLTLQLV 240
           LPSLA+A  AHTVYAQ ETCSEE  VER++SK L+ V LSP+ EKS    S+KS  LQLV
Sbjct: 181 LPSLAEAFAAHTVYAQKETCSEETNVERLISKALQQVKLSPSPEKSKSHGSSKSPKLQLV 240

Query: 241 WGTTMYHIDDLPFDTNSLPDVYTQFRK 264
           WG+TMYH+DDLPF TN +PDVYTQFRK
Sbjct: 241 WGSTMYHMDDLPFYTNDIPDVYTQFRK 260

[Close]

BLAST of CmaCh09G005120 vs. TrEMBL
Match: A0A061GIG4_THECC (DNA photolyase, putative isoform 1 OS=Theobroma cacao GN=TCM_036795 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 8.1e-84
Identity = 165/258 (63.95%), Postives = 202/258 (78.29%), Query Frame = 1


Query: 17  LPNSSSLK------PAQIAANSAHRRIF----VMNSSSKLDSRS-SSSSICQVPGLESEE 76
           LP+SS L       P+ I A S+H R      +MNS+SK + +S SSS+I QVPGL+S E
Sbjct: 4   LPSSSLLSQRKLIYPSSIFAYSSHIRFRLGFQIMNSTSKSEPKSVSSSTIYQVPGLDSHE 63

Query: 77  MDRIAEQMFRRYASPSSSSVKRGKGVAIVWFRNDLRVLDNEALYKAWISSEAVLPVYCVD 136
           MD IAE+ F RY+S +    + GKG++IVW+RNDLRVLDNEAL+KAW+SSEA+LPVYC+D
Sbjct: 64  MDSIAEKTFERYSSKTVK--RNGKGISIVWYRNDLRVLDNEALFKAWVSSEAILPVYCID 123

Query: 137 PRLFGSTCYFGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKPEEILPSLAKALG 196
           PRLF +T  FGFPKTGALRAQFI+ECLADLK+NL+ +GL+LLIQ GKPE+ILPSLAKA G
Sbjct: 124 PRLFETTYCFGFPKTGALRAQFIIECLADLKKNLMKKGLDLLIQRGKPEDILPSLAKAFG 183

Query: 197 AHTVYAQMETCSEELYVERMVSKGLKTVVLSPTSEKSAKPSSAKSLTLQLVWGTTMYHID 256
           AHTVYA  ETCSEEL VER+V++GL+ VVLSP    S   SS  +  L+L+WG+TMYH+D
Sbjct: 184 AHTVYAHKETCSEELQVERLVTRGLRGVVLSPAQGNSTSSSSTHNPKLELIWGSTMYHLD 243

Query: 257 DLPFDTNSLPDVYTQFRK 264
           DLP   +SLPDVYTQFRK
Sbjct: 244 DLPISISSLPDVYTQFRK 259

[Close]

BLAST of CmaCh09G005120 vs. TAIR10
Match: AT5G24850.1 (AT5G24850.1 cryptochrome 3)

HSP 1 Score: 271.6 bits (693), Expect = 1.7e-72
Identity = 135/210 (64.29%), Postives = 160/210 (76.19%), Query Frame = 1


Query: 55  ICQVPGLESEEMDRIAEQMFRRYASPSSSSVKR-GKGVAIVWFRNDLRVLDNEALYKAWI 114
           I +VP L  EE+D +A + F RYA PSSSSVKR GKGV I+WFRNDLRVLDN+ALYKAW 
Sbjct: 5   IHRVPALTEEEIDSVAIKTFERYALPSSSSVKRKGKGVTILWFRNDLRVLDNDALYKAWS 64

Query: 115 SSEAVLPVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKP 174
           SS+ +LPVYC+DPRLF +T +F FPKTGALR  F++ECL DL++NL+ RGLNLLI+ GKP
Sbjct: 65  SSDTILPVYCLDPRLFHTTHFFNFPKTGALRGGFLMECLVDLRKNLMKRGLNLLIRSGKP 124

Query: 175 EEILPSLAKALGAHTVYAQMETCSEELYVERMVSKGLKTVVLSPTSEKSAKPSSAKSLTL 234
           EEILPSLAK  GA TV+A  ETCSEE+ VER+V++GLK V                S  L
Sbjct: 125 EEILPSLAKDFGARTVFAHKETCSEEVDVERLVNQGLKRV--------------GNSTKL 184

Query: 235 QLVWGTTMYHIDDLPFDTNSLPDVYTQFRK 264
           +L+WG+TMYH DDLPFD   LPDVYTQFRK
Sbjct: 185 ELIWGSTMYHKDDLPFDVFDLPDVYTQFRK 200

[Close]

BLAST of CmaCh09G005120 vs. TAIR10
Match: AT2G47590.1 (AT2G47590.1 photolyase/blue-light receptor 2)

HSP 1 Score: 149.1 bits (375), Expect = 1.2e-35
Identity = 79/188 (42.02%), Postives = 109/188 (57.98%), Query Frame = 1


Query: 75  RRYASPSSSSVKRGKGVAIVWFRNDLRVLDNEALYKAWISSEAVLPVYCVDPRLFGSTCY 134
           RR   PSS++  R    A+VWFRNDLRV DNE L  A     +VLPVYC DPR +G +  
Sbjct: 102 RRPVDPSSAAALRR--AAVVWFRNDLRVHDNECLNSANDECVSVLPVYCFDPRDYGKSSS 161

Query: 135 FGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKPEEILPSLAKALGAHTVYAQME 194
            GF KTG  RAQF++E +++L++NL  RG NL+++ GKPE +L  LAK +GA  VYA  E
Sbjct: 162 -GFDKTGPFRAQFLIESVSELRKNLQARGSNLVVRVGKPEAVLVELAKEIGADAVYAHRE 221

Query: 195 TCSEELYVERMVSKGLKTVVLSPTSEKSAKPSSAKSLTLQLVWGTTMYHIDDLPFDTNSL 254
              +E+  E  +   +K                 + + ++  WG+T+YH+DDLPF    L
Sbjct: 222 VSHDEVKAEGKIETAMK----------------EEGVEVKYFWGSTLYHLDDLPFKIEDL 270

Query: 255 PDVYTQFR 263
           P  Y  F+
Sbjct: 282 PSNYGAFK 270

[Close]

BLAST of CmaCh09G005120 vs. TAIR10
Match: AT4G25290.1 (AT4G25290.1 DNA photolyases;DNA photolyases)

HSP 1 Score: 63.5 bits (153), Expect = 6.9e-10
Identity = 51/182 (28.02%), Postives = 79/182 (43.41%), Query Frame = 1


Query: 83  SSVKRGKGVAIVWFRNDLRVLDNEALYKAWISSEAVLPVYCVDPRLFGSTCYFGFPKTGA 142
           SS       A+VWF++DLRV D+  L  A     AV+P+Y +D R+           T  
Sbjct: 28  SSATNEGSTAVVWFKHDLRVDDHPGLLAA-SKHRAVIPLYVLDRRILSRYT------TDT 87

Query: 143 LRAQFIVECLADLKRNLINRGLNLLIQHGKPEEILPSLAKALGAHTVYAQMETCSEELYV 202
           L    I   L DL++ L  +G NL++++G  E ++  L K + A  V+ + E       V
Sbjct: 88  LELAIIA--LEDLRKTLKKQGSNLMLRYGNAENVIEDLVKEVRAPFVFVEEEVEYHLCEV 147

Query: 203 ERMVSKGLKTVVLSPTSEKSAKPSSAKSLTLQLVWGTTMYHIDDLPFDTNSLPDVYTQFR 262
              V   L+ V LS  S +             + W T  Y   +L      LP  + +F+
Sbjct: 148 LDAVKNKLEGVSLSGESPRI------------VAWRTPFYESQNL----TDLPQSWEEFK 184

Query: 263 KV 265
           K+
Sbjct: 208 KL 184

[Close]

BLAST of CmaCh09G005120 vs. TAIR10
Match: AT3G15620.1 (AT3G15620.1 DNA photolyase family protein)

HSP 1 Score: 63.2 bits (152), Expect = 9.0e-10
Identity = 41/108 (37.96%), Postives = 57/108 (52.78%), Query Frame = 1


Query: 79  SPSS------SSVKRGKGVAIVWFRNDLRVLDNEALYKAWISSEAVLPVYCVDPRLF--- 138
           SPSS      +S+  G G +++WFR  LRV DN AL  A   SE + PV+ +DP      
Sbjct: 8   SPSSYRLNPITSMATGSG-SLIWFRKGLRVHDNPALEYASKGSEFMYPVFVIDPHYMESD 67

Query: 139 GSTCYFGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKPEEIL 178
            S    G  + G  R +F++E L DL  +L   G  LL+  G+P E+L
Sbjct: 68  PSAFSPGSSRAGVNRIRFLLESLKDLDSSLKKLGSRLLVFKGEPGEVL 114

[Close]

BLAST of CmaCh09G005120 vs. NCBI nr
Match: gi|778687135|ref|XP_004136321.2| (PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Cucumis sativus])

HSP 1 Score: 443.4 bits (1139), Expect = 9.1e-121
Identity = 234/266 (87.97%), Postives = 241/266 (90.60%), Query Frame = 1


Query: 2   NTLRISFSSFPLLKTLPNSSSLKPA-QIAANSAHRRIFVMNSSSKLDSRS-SSSSICQVP 61
           NTLR S +S PLLKTLPN SSLKP   IA  SA RRIFVMNSSSKLDSRS SSSS CQVP
Sbjct: 4   NTLRSSLTSLPLLKTLPNYSSLKPVIHIAVKSASRRIFVMNSSSKLDSRSPSSSSTCQVP 63

Query: 62  GLESEEMDRIAEQMFRRYASPSSSSVKRGKGVAIVWFRNDLRVLDNEALYKAWISSEAVL 121
           GLESEEMDR+ EQMFRRY+S  SS  KRGKGVAIVWFRNDLRVLDNEAL KAWISSEAVL
Sbjct: 64  GLESEEMDRVVEQMFRRYSS--SSGFKRGKGVAIVWFRNDLRVLDNEALNKAWISSEAVL 123

Query: 122 PVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKPEEILPS 181
           PVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNL  RGLNLLIQHGKPEEILPS
Sbjct: 124 PVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNLTKRGLNLLIQHGKPEEILPS 183

Query: 182 LAKALGAHTVYAQMETCSEELYVERMVSKGLKTVVLSPTSEK--SAKPSSAKSLTLQLVW 241
           LAKALGAHTV+AQMETCSEELYVE+MVSKGLKTVVLSPTSEK  SAK S+A+S T QLVW
Sbjct: 184 LAKALGAHTVFAQMETCSEELYVEKMVSKGLKTVVLSPTSEKSASAKSSAARSPTFQLVW 243

Query: 242 GTTMYHIDDLPFDTNSLPDVYTQFRK 264
           GTTMYHIDDLPFDTNSLPDVYTQFRK
Sbjct: 244 GTTMYHIDDLPFDTNSLPDVYTQFRK 267

[Close]

BLAST of CmaCh09G005120 vs. NCBI nr
Match: gi|659132689|ref|XP_008466332.1| (PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Cucumis melo])

HSP 1 Score: 442.6 bits (1137), Expect = 1.5e-120
Identity = 233/266 (87.59%), Postives = 241/266 (90.60%), Query Frame = 1


Query: 2   NTLRISFSSF-PLLKTLPNSSSLKPA-QIAANSAHRRIFVMNSSSKLDSRSSSSSICQVP 61
           +TL+ISFSS  PLLKTLPN SSLKPA QI+  SA RRIFVMNSSSKLDSRS S S CQVP
Sbjct: 4   STLQISFSSLLPLLKTLPNCSSLKPAIQISVKSASRRIFVMNSSSKLDSRSLSLSTCQVP 63

Query: 62  GLESEEMDRIAEQMFRRYASPSSSSVKRGKGVAIVWFRNDLRVLDNEALYKAWISSEAVL 121
           GLE EEMD + EQMFRRY+S  SS  KRGKGVAIVWFRNDLRVLDNEALYKAWISSEAVL
Sbjct: 64  GLEPEEMDSVVEQMFRRYSS--SSGFKRGKGVAIVWFRNDLRVLDNEALYKAWISSEAVL 123

Query: 122 PVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNLINRGLNLLIQHGKPEEILPS 181
           PVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNL  RGLNLLIQHGKPEEILPS
Sbjct: 124 PVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRNLTKRGLNLLIQHGKPEEILPS 183

Query: 182 LAKALGAHTVYAQMETCSEELYVERMVSKGLKTVVLSPTSEKSAK--PSSAKSLTLQLVW 241
           LAKALGAHTVYAQMETCSEELYVE+MVSKGLKTVVLSPTSEKSA    S+A+S T QLVW
Sbjct: 184 LAKALGAHTVYAQMETCSEELYVEKMVSKGLKTVVLSPTSEKSASAMSSAARSPTFQLVW 243

Query: 242 GTTMYHIDDLPFDTNSLPDVYTQFRK 264
           GTTMYHIDDLPFDTNSLPDVYTQFRK
Sbjct: 244 GTTMYHIDDLPFDTNSLPDVYTQFRK 267

[Close]

BLAST of CmaCh09G005120 vs. NCBI nr
Match: gi|645225939|ref|XP_008219808.1| (PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Prunus mume])

HSP 1 Score: 334.0 bits (855), Expect = 7.7e-88
Identity = 171/225 (76.00%), Postives = 192/225 (85.33%), Query Frame = 1


Query: 40  MNSSSKLDSRSSSSSICQVPGLESEEMDRIAEQMFRRYASPSSSSVKR-GKGVAIVWFRN 99
           M+SSSK      S+ + +VPGL+ EEMDR+A+Q F+RY   SSSSVKR GKGVA+VWFRN
Sbjct: 39  MSSSSK---SQPSAPVYKVPGLDPEEMDRVADQTFQRY---SSSSVKRNGKGVAVVWFRN 98

Query: 100 DLRVLDNEALYKAWISSEAVLPVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRN 159
           DLRVLDNEALYKAWISS+ VL VYCVDPRLFGST YFGFPKTGALRAQF++ECLADLK+N
Sbjct: 99  DLRVLDNEALYKAWISSQQVLAVYCVDPRLFGSTHYFGFPKTGALRAQFLIECLADLKKN 158

Query: 160 LINRGLNLLIQHGKPEEILPSLAKALGAHTVYAQMETCSEELYVERMVSKGLKTVVLSPT 219
           L+ RGLNLLIQHGKPEEILPSLAK  GAHTVYAQ ETCSEEL VER+V KGL+ VVL  +
Sbjct: 159 LMKRGLNLLIQHGKPEEILPSLAKVFGAHTVYAQKETCSEELNVERLVRKGLQRVVLPSS 218

Query: 220 SEKSAKPSSAKSLTLQLVWGTTMYHIDDLPFDTNSLPDVYTQFRK 264
           S +S+ PSS  +  LQL+WGTTMYHIDDLPFDT SLPDVYTQFRK
Sbjct: 219 SAQSSGPSSTNNPKLQLLWGTTMYHIDDLPFDTLSLPDVYTQFRK 257

[Close]

BLAST of CmaCh09G005120 vs. NCBI nr
Match: gi|596134091|ref|XP_007222243.1| (hypothetical protein PRUPE_ppa003875mg [Prunus persica])

HSP 1 Score: 328.9 bits (842), Expect = 2.5e-86
Identity = 168/225 (74.67%), Postives = 192/225 (85.33%), Query Frame = 1


Query: 40  MNSSSKLDSRSSSSSICQVPGLESEEMDRIAEQMFRRYASPSSSSVKR-GKGVAIVWFRN 99
           M+SSSK     SS+ + +VPGL+ E+MDR+A+Q F+RY   S+S VKR GKGVA+VWFRN
Sbjct: 1   MSSSSK---SQSSAPVYKVPGLDPEDMDRVADQTFQRY---SASPVKRNGKGVAVVWFRN 60

Query: 100 DLRVLDNEALYKAWISSEAVLPVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLKRN 159
           DLRVLDNEALYKAWISS+ VL VYCVDPRLFGST YFGFPKTGALRAQF++ECLADLK+N
Sbjct: 61  DLRVLDNEALYKAWISSQEVLGVYCVDPRLFGSTHYFGFPKTGALRAQFLIECLADLKKN 120

Query: 160 LINRGLNLLIQHGKPEEILPSLAKALGAHTVYAQMETCSEELYVERMVSKGLKTVVLSPT 219
           L+ RGLNLLIQHGKPEEILPSLA+  GAHTVYAQ ETCSEEL VER+V KGL+ VVL  +
Sbjct: 121 LMKRGLNLLIQHGKPEEILPSLAEVFGAHTVYAQKETCSEELNVERLVRKGLQRVVLPLS 180

Query: 220 SEKSAKPSSAKSLTLQLVWGTTMYHIDDLPFDTNSLPDVYTQFRK 264
           S +S+ PSS  +  LQL+WGTTMYHIDDLPFDT SLPDVYTQFRK
Sbjct: 181 SAQSSGPSSTNNPKLQLLWGTTMYHIDDLPFDTLSLPDVYTQFRK 219

[Close]

BLAST of CmaCh09G005120 vs. NCBI nr
Match: gi|694372548|ref|XP_009363594.1| (PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Pyrus x bretschneideri])

HSP 1 Score: 328.6 bits (841), Expect = 3.3e-86
Identity = 161/227 (70.93%), Postives = 189/227 (83.26%), Query Frame = 1


Query: 37  IFVMNSSSKLDSRSSSSSICQVPGLESEEMDRIAEQMFRRYASPSSSSVKRGKGVAIVWF 96
           +F   SSS      S + + QVPGL+  EM+++A+Q  +RY S SSS+ + G+GVA+VWF
Sbjct: 36  LFRPMSSSSSSKPESPAPVSQVPGLDPVEMEQVADQTLQRY-SASSSAKRNGRGVAVVWF 95

Query: 97  RNDLRVLDNEALYKAWISSEAVLPVYCVDPRLFGSTCYFGFPKTGALRAQFIVECLADLK 156
           RNDLRVLDNEALYKAW+SS+ VL VYCVDPR+FGST YFGFPKTGALRAQF+ ECLADLK
Sbjct: 96  RNDLRVLDNEALYKAWVSSQEVLAVYCVDPRIFGSTHYFGFPKTGALRAQFLTECLADLK 155

Query: 157 RNLINRGLNLLIQHGKPEEILPSLAKALGAHTVYAQMETCSEELYVERMVSKGLKTVVLS 216
           +NL+ RGLNLLIQHGKPEEILP LAKA GAHTVYAQ ETCSEEL VER+VSKGL+ VVL 
Sbjct: 156 KNLMKRGLNLLIQHGKPEEILPDLAKAFGAHTVYAQKETCSEELNVERLVSKGLQRVVLP 215

Query: 217 PTSEKSAKPSSAKSLTLQLVWGTTMYHIDDLPFDTNSLPDVYTQFRK 264
            +S +S+KP S  +  LQL+WGTTMYHI+DLPFDT+SLPDVYTQFRK
Sbjct: 216 SSSVQSSKPGSVNNPRLQLIWGTTMYHIEDLPFDTSSLPDVYTQFRK 261

The following BLAST results are available for this feature:

BLAST of CmaCh09G005120 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CRYD_SOLLC	8.6e-79	64.91	Cryptochrome DASH, chloroplastic/mitochondrial OS=Solanum lycopersicum GN=CRYD P...	[more]
CRYD_ORYSJ	9.2e-73	58.08	Cryptochrome DASH, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica G...	[more]
CRYD_ARATH	1.9e-70	56.86	Cryptochrome DASH, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=CRYD P...	[more]
PHR2_ARATH	2.2e-34	42.02	Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana GN=PHR2 PE=2 SV=2	[more]
CRYD_GLOVI	4.3e-30	40.94	Cryptochrome DASH OS=Gloeobacter violaceus (strain PCC 7421) GN=cry PE=3 SV=1	[more]

BLAST of CmaCh09G005120 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEG3_CUCSA	6.3e-121	87.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G881660 PE=4 SV=1	[more]
M5XBF8_PRUPE	1.7e-86	74.67	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003875mg PE=4 SV=1	[more]
W9RSE2_9ROSA	3.3e-85	68.34	Cryptochrome DASH OS=Morus notabilis GN=L484_004414 PE=4 SV=1	[more]
A0A067KBB8_JATCU	5.6e-85	64.79	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07003 PE=4 SV=1	[more]
A0A061GIG4_THECC	8.1e-84	63.95	DNA photolyase, putative isoform 1 OS=Theobroma cacao GN=TCM_036795 PE=4 SV=1	[more]

BLAST of CmaCh09G005120 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24850.1	1.7e-72	64.29	cryptochrome 3	[more]
AT2G47590.1	1.2e-35	42.02	photolyase/blue-light receptor 2	[more]
AT4G25290.1	6.9e-10	28.02	DNA photolyases;DNA photolyases	[more]
AT3G15620.1	9.0e-10	37.96	DNA photolyase family protein	[more]

BLAST of CmaCh09G005120 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778687135\|ref\|XP_004136321.2\|	9.1e-121	87.97	PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Cucumis sativus]	[more]
gi\|659132689\|ref\|XP_008466332.1\|	1.5e-120	87.59	PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Cucumis melo]	[more]
gi\|645225939\|ref\|XP_008219808.1\|	7.7e-88	76.00	PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Prunus mume]	[more]
gi\|596134091\|ref\|XP_007222243.1\|	2.5e-86	74.67	hypothetical protein PRUPE_ppa003875mg [Prunus persica]	[more]
gi\|694372548\|ref\|XP_009363594.1\|	3.3e-86	70.93	PREDICTED: cryptochrome DASH, chloroplastic/mitochondrial [Pyrus x bretschneider...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006050	DNA_photolyase_N
IPR014133	Cry_DASH
IPR014729	Rossmann-like_a/b/a_fold

Vocabulary: **Molecular Function**
Term	Definition
GO:0003913	DNA photolyase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006281	DNA repair

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003913	DNA photolyase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G005120.1	CmaCh09G005120.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006050	DNA photolyase, N-terminal	PFAM	PF00875	DNA_photolyase	coord: 92..263 score: 2.0
IPR006050	DNA photolyase, N-terminal	PROFILE	PS51645	PHR_CRY_ALPHA_BETA	coord: 90..218 score: 32
IPR006050	DNA photolyase, N-terminal	unknown	SSF52425	Cryptochrome/photolyase, N-terminal domain	coord: 88..264 score: 7.72
IPR014133	Cryptochrome DASH	PANTHER	PTHR11455:SF22	CRYPTOCHROME DASH	coord: 22..211 score: 3.4E-86coord: 228..263 score: 3.4
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	G3DSA:3.40.50.620		coord: 84..263 score: 3.4
None	No IPR available	unknown	Coil	Coil	coord: 399..419 score: -coord: 739..759 scor
None	No IPR available	PANTHER	PTHR11455	CRYPTOCHROME	coord: 22..211 score: 3.4E-86coord: 228..263 score: 3.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G005120	Carg21160	Silver-seed gourd	carcmaB0768

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G005120	Watermelon (97103) v2	cmawmbB027
CmaCh09G005120	Watermelon (97103) v2	cmawmbB044
CmaCh09G005120	Wax gourd	cmawgoB0015
CmaCh09G005120	Wax gourd	cmawgoB0026
CmaCh09G005120	Cucurbita maxima (Rimu)	cmacmaB036
CmaCh09G005120	Cucurbita maxima (Rimu)	cmacmaB044
CmaCh09G005120	Cucurbita maxima (Rimu)	cmacmaB059
CmaCh09G005120	Cucurbita maxima (Rimu)	cmacmaB068
CmaCh09G005120	Cucumber (Gy14) v1	cgycmaB0445
CmaCh09G005120	Cucumber (Gy14) v1	cgycmaB0854
CmaCh09G005120	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G005120	Cucurbita moschata (Rifu)	cmacmoB035
CmaCh09G005120	Cucurbita moschata (Rifu)	cmacmoB040
CmaCh09G005120	Cucurbita moschata (Rifu)	cmacmoB055
CmaCh09G005120	Cucurbita moschata (Rifu)	cmacmoB063
CmaCh09G005120	Wild cucumber (PI 183967)	cmacpiB013
CmaCh09G005120	Wild cucumber (PI 183967)	cmacpiB014
CmaCh09G005120	Cucumber (Chinese Long) v2	cmacuB012
CmaCh09G005120	Cucumber (Chinese Long) v2	cmacuB014
CmaCh09G005120	Melon (DHL92) v3.5.1	cmameB024
CmaCh09G005120	Melon (DHL92) v3.5.1	cmameB034
CmaCh09G005120	Watermelon (Charleston Gray)	cmawcgB022
CmaCh09G005120	Watermelon (Charleston Gray)	cmawcgB038
CmaCh09G005120	Watermelon (97103) v1	cmawmB023
CmaCh09G005120	Watermelon (97103) v1	cmawmB027
CmaCh09G005120	Cucurbita pepo (Zucchini)	cmacpeB052
CmaCh09G005120	Cucurbita pepo (Zucchini)	cmacpeB053
CmaCh09G005120	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G005120	Bottle gourd (USVL1VR-Ls)	cmalsiB022
CmaCh09G005120	Cucumber (Gy14) v2	cgybcmaB148
CmaCh09G005120	Cucumber (Gy14) v2	cgybcmaB285
CmaCh09G005120	Melon (DHL92) v3.6.1	cmamedB025
CmaCh09G005120	Melon (DHL92) v3.6.1	cmamedB033
CmaCh09G005120	Silver-seed gourd	carcmaB0072
CmaCh09G005120	Silver-seed gourd	carcmaB0767
CmaCh09G005120	Silver-seed gourd	carcmaB0889
CmaCh09G005120	Cucumber (Chinese Long) v3	cmacucB0017
CmaCh09G005120	Cucumber (Chinese Long) v3	cmacucB0021