CmaCh09G003970 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G003970
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	VQ motif-containing protein
Location	Cma_Chr09 : 1677114 .. 1677647 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAAACATCTAACCACCGTCTCTTCGCCACCGCCGCCGCCGCTGCCGTCAACTTCTCCAACCACCTTCGTCCAAGCCGACCCAAACTCCTTTAGAGACCTCGTCCAGAAGCTAACCGGCTTTTCCGGTCACTCCGAAAAGCTACCGGTTACCCACCTCTCCAAACTTTCCTCTTCGAATCCCTTACCTCCCGCCACAGACCATCATACCGGTCCCCGCCGGTCTCCGTTCAAGCTCCAAGAGCGCCGTCACACAATACGAAAGCTAGAGATCAAACTCGGCCCCACTGGAATTTTCAAAAACTCGCCTAGTCACCCTCGCCGATTCGACTCGCCCATTCCGAGTCCGGTTACGCCTCTCGCCGTCGAGTTCCTGTTTTTACGGAAGCCCGGCGTAGCCTCGCCACTGACGCCGCCGGTAACGGCGGAGGATAAAGCCATAGCCGACGGTGGCTTTTACCTTCACCCGTCTCCGAGGAGCTCACAGCCGCCGGAGCTCTTGAATTTGTTCCCGTCTAAATTCGCCAATTGA

mRNA sequence

ATGGAAAAACATCTAACCACCGTCTCTTCGCCACCGCCGCCGCCGCTGCCGTCAACTTCTCCAACCACCTTCGTCCAAGCCGACCCAAACTCCTTTAGAGACCTCGTCCAGAAGCTAACCGGCTTTTCCGGTCACTCCGAAAAGCTACCGGTTACCCACCTCTCCAAACTTTCCTCTTCGAATCCCTTACCTCCCGCCACAGACCATCATACCGGTCCCCGCCGGTCTCCGTTCAAGCTCCAAGAGCGCCGTCACACAATACGAAAGCTAGAGATCAAACTCGGCCCCACTGGAATTTTCAAAAACTCGCCTAGTCACCCTCGCCGATTCGACTCGCCCATTCCGAGTCCGGTTACGCCTCTCGCCGTCGAGTTCCTGTTTTTACGGAAGCCCGGCGTAGCCTCGCCACTGACGCCGCCGGTAACGGCGGAGGATAAAGCCATAGCCGACGGTGGCTTTTACCTTCACCCGTCTCCGAGGAGCTCACAGCCGCCGGAGCTCTTGAATTTGTTCCCGTCTAAATTCGCCAATTGA

Coding sequence (CDS)

ATGGAAAAACATCTAACCACCGTCTCTTCGCCACCGCCGCCGCCGCTGCCGTCAACTTCTCCAACCACCTTCGTCCAAGCCGACCCAAACTCCTTTAGAGACCTCGTCCAGAAGCTAACCGGCTTTTCCGGTCACTCCGAAAAGCTACCGGTTACCCACCTCTCCAAACTTTCCTCTTCGAATCCCTTACCTCCCGCCACAGACCATCATACCGGTCCCCGCCGGTCTCCGTTCAAGCTCCAAGAGCGCCGTCACACAATACGAAAGCTAGAGATCAAACTCGGCCCCACTGGAATTTTCAAAAACTCGCCTAGTCACCCTCGCCGATTCGACTCGCCCATTCCGAGTCCGGTTACGCCTCTCGCCGTCGAGTTCCTGTTTTTACGGAAGCCCGGCGTAGCCTCGCCACTGACGCCGCCGGTAACGGCGGAGGATAAAGCCATAGCCGACGGTGGCTTTTACCTTCACCCGTCTCCGAGGAGCTCACAGCCGCCGGAGCTCTTGAATTTGTTCCCGTCTAAATTCGCCAATTGA

Protein sequence

MEKHLTTVSSPPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSSNPLPPATDHHTGPRRSPFKLQERRHTIRKLEIKLGPTGIFKNSPSHPRRFDSPIPSPVTPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPSPRSSQPPELLNLFPSKFAN

Homology

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BLAST of CmaCh09G003970 vs. Swiss-Prot
Match: VQ11_ARATH (VQ motif-containing protein 11 OS=Arabidopsis thaliana GN=VQ11 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.0e-13
Identity = 67/169 (39.64%), Postives = 92/169 (54.44%), Query Frame = 1


Query: 14  PPLPSTSPTT-FVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSSNPLPPATDHHTG 73
           PP  +T P T FVQADP++FR++VQKLTG       +  +  S +S+++   P T     
Sbjct: 6   PPSYATEPNTMFVQADPSNFRNIVQKLTGAP---PDISSSSFSAVSAAHQKLPLT----- 65

Query: 74  PRRSPFKLQERRHTIRKLEIKLGPTGIFKNSPSHPRRFDSPIPSPVTPLAVEFLFLRKPG 133
           P++  FKL ERR + +K+E+K+       ++ SH  R    + SPV+ L   F     P 
Sbjct: 66  PKKPAFKLHERRQSSKKMELKVNNITNPNDAFSHFHR--GFLVSPVSHLD-PFWARVSPH 125

Query: 134 VASPL--TPPVTAEDKAIADGGFYLHPSPRS-SQP-PELLNLFPSKFAN 178
            A       P   E KAIA+ GFY  PSPRS S+P PELL LFP +  N
Sbjct: 126 SAREEHHAQPDKEEQKAIAEKGFYFLPSPRSGSEPAPELLPLFPLRSPN 163

[Close]

BLAST of CmaCh09G003970 vs. Swiss-Prot
Match: VQ4_ARATH (VQ motif-containing protein 4 OS=Arabidopsis thaliana GN=VQ4 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-12
Identity = 70/197 (35.53%), Postives = 96/197 (48.73%), Query Frame = 1


Query: 3   KHLTTVSSPPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFS-----GHSEKLPVTHLSKL 62
           +H+TT S    P      PTTFVQAD +SF+ +VQ LTG +     G S K   TH    
Sbjct: 43  RHVTTRSESGNP-----YPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPD 102

Query: 63  SSSNP----LPP----ATDHHTGPRRSPFKLQERRHTIRKLEIK-LGPTGIFKNSPSHPR 122
             S P    +PP         +    S F+L ERR++++ L+I  L P     NS   PR
Sbjct: 103 PRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPR 162

Query: 123 R----------FDSPIPSPVTPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPS 173
           +          F S + SPVTPL  +     + G ++     + AE+KA+ + GFYLHPS
Sbjct: 163 KPEILSPSILDFPSLVLSPVTPLIPD--PFDRSGSSNQSPNELAAEEKAMKERGFYLHPS 222

[Close]

BLAST of CmaCh09G003970 vs. Swiss-Prot
Match: VQ31_ARATH (VQ motif-containing protein 31 OS=Arabidopsis thaliana GN=VQ31 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.7e-11
Identity = 60/162 (37.04%), Postives = 82/162 (50.62%), Query Frame = 1


Query: 22  TTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSSNPLPPATDHHTGPRRSP-FKL 81
           TTFVQ D N+FR++VQ+LTG             ++ +++   P AT   T  ++ P  KL
Sbjct: 17  TTFVQTDTNTFREIVQRLTG------------PTENNAAAATPEATVIKTAIQKRPTSKL 76

Query: 82  QERRHTIR-KLEI-----KLGPTGIFKNSPS-HPRRFDSPIPSPVTPLAVEFLFLRKPGV 141
            ERR  +R KLEI        PTG   +S S +     SP+ +P +  +   L   +P  
Sbjct: 77  HERRQCMRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEP-- 136

Query: 142 ASPLTPPVTAEDKAIADGGFYLHPSPRSS---QPPELLNLFP 173
               T  +  E+KAI +  FYLHPSPRS      PELL LFP
Sbjct: 137 -DSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFP 163

[Close]

BLAST of CmaCh09G003970 vs. Swiss-Prot
Match: VQ33_ARATH (VQ motif-containing protein 33 OS=Arabidopsis thaliana GN=VQ33 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.9e-10
Identity = 70/200 (35.00%), Postives = 90/200 (45.00%), Query Frame = 1


Query: 16  LPSTSPTTFVQADPNSFRDLVQKLTGFS-------GHSEKLPVTHLSKLSSSNPLPPATD 75
           L +  PTTFVQAD ++F+ +VQ LTG S        H    PV + +K  SS  +PP   
Sbjct: 43  LSNPYPTTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNK-GSSFSIPPI-- 102

Query: 76  HHTGPRRSPFKLQERRHT-----------IRKLEIKLGPTGIFK--NSPSHPRRFDSPIP 135
                + + FKL ERR             I  L ++     +F   NS  H     SP  
Sbjct: 103 ----KKTNSFKLYERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRN 162

Query: 136 SPVTP---LAVEFLFLRKPGVASPLTP------------PV-----TAEDKAIADGGFYL 173
           S  +    L+   L   K G+ SP+TP            P+     + EDKAIAD GFYL
Sbjct: 163 SSSSENILLSPSMLDFPKLGLNSPVTPLRSNDDPFNKSSPLSLGNSSEEDKAIADKGFYL 222

[Close]

BLAST of CmaCh09G003970 vs. Swiss-Prot
Match: VQ19_ARATH (VQ motif-containing protein 19 OS=Arabidopsis thaliana GN=VQ19 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.7e-08
Identity = 64/187 (34.22%), Postives = 79/187 (42.25%), Query Frame = 1


Query: 21  PTTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSSNPLPPATDHHTG-------- 80
           PTTFVQAD +SF+ +VQ LTG S           S  S  +P PP T    G        
Sbjct: 36  PTTFVQADSSSFKQVVQMLTGSS-----------SPRSPDSPRPPTTPSGKGNFVIPPIK 95

Query: 81  ----PRRSPFKLQERRH------------TIRKLEIKLGPTGIFKNSPSH-----PRRFD 140
                + S  KL ERR              I  L I  G  G  + SP +     P   D
Sbjct: 96  TAQPKKHSGNKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLD 155

Query: 141 SP---IPSPVTPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPSPRSS---QPP 173
            P   + SPVTPL          G       P++ E++ IAD G+YLH SP S+     P
Sbjct: 156 FPKLALNSPVTPLKQGTN--GNEGDPFDKMSPLSEEERGIADKGYYLHRSPISTPRDSEP 209

[Close]

BLAST of CmaCh09G003970 vs. TrEMBL
Match: A0A0A0L104_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G651800 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.7e-71
Identity = 143/177 (80.79%), Postives = 151/177 (85.31%), Query Frame = 1


Query: 1   MEKHLTTVSSPPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSS 60
           ME+H+ T SSPPP    STSPTTFVQAD NSFRDLVQKLTGF+G SEKLPVTHLSKLSSS
Sbjct: 1   MERHVITASSPPP----STSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSS 60

Query: 61  NPLPP-ATDHHTGPRRSPFKLQERRHTIRKLEIKLGPTGIFKNS-PSHPRRFDSPIPSPV 120
            P PP A D+HTGPRRSPFKLQERRHTIRKLEI+L  T  FKNS PSH RR DSP+P PV
Sbjct: 61  KPFPPPAADYHTGPRRSPFKLQERRHTIRKLEIQLALTRPFKNSSPSHTRRVDSPVPGPV 120

Query: 121 TPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPSPRSSQPPELLNLFPSKF 176
           TPLA E LF R+P V SPL+PPVTAEDKAIAD GFYLHPSPRSSQPPELLNLFPSKF
Sbjct: 121 TPLAAESLFFRRPSVTSPLSPPVTAEDKAIADSGFYLHPSPRSSQPPELLNLFPSKF 173

[Close]

BLAST of CmaCh09G003970 vs. TrEMBL
Match: A0A067KEQ3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07064 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-42
Identity = 109/185 (58.92%), Postives = 129/185 (69.73%), Query Frame = 1


Query: 1   MEKHLTTVSSPPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFSGHS-EKLPVTHLSKLSS 60
           ME+++ +  +P P     TSPTTFVQAD N+FRDLVQKLTG +G S EK PVT  +KLSS
Sbjct: 1   MERYINSSITPSP-----TSPTTFVQADTNTFRDLVQKLTGLAGDSSEKFPVTLPTKLSS 60

Query: 61  --SNPLPPATDHHTGPRRSPFKLQERR-HTIRKLEIKLGPTGIFKNSPSHPRRFDSPIPS 120
             S+P+ P     TGPRRS FKLQERR HTIRKLEI+LG T  F    +H  R +SPIPS
Sbjct: 61  KLSHPVDP-----TGPRRSSFKLQERRQHTIRKLEIELGLTSQFSFRKTH--RLESPIPS 120

Query: 121 PVTPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPS----PRSSQPPELLNLFP 178
           PVTPL+ + LF R PG  SP +P V+ E+KAIA+ GFYLHPS    PR S+PPELL LFP
Sbjct: 121 PVTPLSSDSLFFRSPGTESPSSPAVSEEEKAIAEKGFYLHPSPLTTPRGSEPPELLTLFP 173

[Close]

BLAST of CmaCh09G003970 vs. TrEMBL
Match: B9RNS7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0920500 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.8e-42
Identity = 108/177 (61.02%), Postives = 123/177 (69.49%), Query Frame = 1


Query: 4   HLTTVSSPPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFSGHS-EKLPVTHLSKLSSSNP 63
           H+ T++SP       TSPTTFVQAD N+FRDLVQKLTG +G+S EKLP+T  ++LSS   
Sbjct: 5   HMNTMTSP-------TSPTTFVQADANTFRDLVQKLTGSTGNSSEKLPITLPTRLSSKLS 64

Query: 64  LPPATDHHTGPRRSPFKLQERRHTIRKLEIKLGPTGIFKNSPSHPRRFDSPIPSPVTPLA 123
            P  T   TGPRRSPFKLQERRHTIRKLEIKLG T   K     P R  S IPSPVTPL+
Sbjct: 65  HPVDT---TGPRRSPFKLQERRHTIRKLEIKLGLTSSHK-----PHRVSSTIPSPVTPLS 124

Query: 124 VEFLFLRKPGV---ASPLTPPVTAEDKAIADGGFYLHPS----PRSSQPPELLNLFP 173
            E LF R PG    +SP +P V+ EDKAIA+ GFYLHPS    PR  +PPELL LFP
Sbjct: 125 SESLFFRSPGTDQSSSPSSPAVSEEDKAIAEKGFYLHPSPLTTPRGGEPPELLTLFP 166

[Close]

BLAST of CmaCh09G003970 vs. TrEMBL
Match: W9RZ63_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007135 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.2e-41
Identity = 107/195 (54.87%), Postives = 128/195 (65.64%), Query Frame = 1


Query: 1   MEKHLTTVSS------PPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHL 60
           MEKH+ T+++      P  P   S +PTTFVQADPN+F+DLVQKLTG SG +EKLPVT  
Sbjct: 1   MEKHMKTMTTAIAAAAPTTPSPTSPAPTTFVQADPNTFKDLVQKLTGSSGDTEKLPVTLP 60

Query: 61  SKLSSSNPLPPATDHHTGPRRSPFKLQERRHTIRKLEIKL------GPTGI-------FK 120
           ++LSS    P      TGPRRSPFKLQ+RR T+RKLEIKL      G +G        + 
Sbjct: 61  TRLSSK---PSILVDPTGPRRSPFKLQDRRQTMRKLEIKLSLATIGGSSGTVPAPGYQYH 120

Query: 121 NSPSHPRRFDSPIPSPVTPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPS--- 173
            SP      DSPIPSPVTPL  E LF+   G  SP +P V+ E++AIAD GFYLHPS   
Sbjct: 121 LSPRQIHWVDSPIPSPVTPLGSESLFVPSSGSPSPSSPAVSEEERAIADKGFYLHPSPLS 180

[Close]

BLAST of CmaCh09G003970 vs. TrEMBL
Match: M5XSA3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020319mg PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.8e-40
Identity = 105/185 (56.76%), Postives = 118/185 (63.78%), Query Frame = 1


Query: 1   MEKHLTTVSSPPPPP---LPSTSPTTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKL 60
           MEKH      PP       P++SPTTFVQAD N+FRDLVQKLTG SG SEKLPVTH ++ 
Sbjct: 1   MEKH-----HPPQSTNLCSPTSSPTTFVQADTNTFRDLVQKLTGLSGDSEKLPVTHPTRH 60

Query: 61  SSSNPLPPATDHHTGPRRSPFKLQERRHTIRKLEIKLGPTGIFKNSPSHPRR----FDSP 120
               P  P     TGPRRSPFKLQERRHT+RKLEIKL    +  +    PR+     DSP
Sbjct: 61  YPKAPTIPGDP--TGPRRSPFKLQERRHTMRKLEIKLSLANLHGSQSQTPRQTYQLLDSP 120

Query: 121 IPSPVTPLAVEFLFLRKPGVASPLTPPVTA--EDKAIADGGFYLHPS----PRSSQPPEL 173
           IPSPVTPL  + LF    G  SP +P   A  E+KAIA+ GFYLHPS    PR S PPEL
Sbjct: 121 IPSPVTPLGSDSLFFPSSGSESPSSPAAAASEEEKAIAEKGFYLHPSPLSTPRGSDPPEL 178

[Close]

BLAST of CmaCh09G003970 vs. TAIR10
Match: AT1G80450.1 (AT1G80450.1 VQ motif-containing protein)

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-14
Identity = 67/169 (39.64%), Postives = 92/169 (54.44%), Query Frame = 1


Query: 14  PPLPSTSPTT-FVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSSNPLPPATDHHTG 73
           PP  +T P T FVQADP++FR++VQKLTG       +  +  S +S+++   P T     
Sbjct: 6   PPSYATEPNTMFVQADPSNFRNIVQKLTGAP---PDISSSSFSAVSAAHQKLPLT----- 65

Query: 74  PRRSPFKLQERRHTIRKLEIKLGPTGIFKNSPSHPRRFDSPIPSPVTPLAVEFLFLRKPG 133
           P++  FKL ERR + +K+E+K+       ++ SH  R    + SPV+ L   F     P 
Sbjct: 66  PKKPAFKLHERRQSSKKMELKVNNITNPNDAFSHFHR--GFLVSPVSHLD-PFWARVSPH 125

Query: 134 VASPL--TPPVTAEDKAIADGGFYLHPSPRS-SQP-PELLNLFPSKFAN 178
            A       P   E KAIA+ GFY  PSPRS S+P PELL LFP +  N
Sbjct: 126 SAREEHHAQPDKEEQKAIAEKGFYFLPSPRSGSEPAPELLPLFPLRSPN 163

[Close]

BLAST of CmaCh09G003970 vs. TAIR10
Match: AT1G28280.1 (AT1G28280.1 VQ motif-containing protein)

HSP 1 Score: 74.7 bits (182), Expect = 6.3e-14
Identity = 70/197 (35.53%), Postives = 96/197 (48.73%), Query Frame = 1


Query: 3   KHLTTVSSPPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFS-----GHSEKLPVTHLSKL 62
           +H+TT S    P      PTTFVQAD +SF+ +VQ LTG +     G S K   TH    
Sbjct: 43  RHVTTRSESGNP-----YPTTFVQADTSSFKQVVQMLTGSAERPKHGSSLKPNPTHHQPD 102

Query: 63  SSSNP----LPP----ATDHHTGPRRSPFKLQERRHTIRKLEIK-LGPTGIFKNSPSHPR 122
             S P    +PP         +    S F+L ERR++++ L+I  L P     NS   PR
Sbjct: 103 PRSTPSSFSIPPIKAVPNKKQSSSSASGFRLYERRNSMKNLKINPLNPVFNPVNSAFSPR 162

Query: 123 R----------FDSPIPSPVTPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPS 173
           +          F S + SPVTPL  +     + G ++     + AE+KA+ + GFYLHPS
Sbjct: 163 KPEILSPSILDFPSLVLSPVTPLIPD--PFDRSGSSNQSPNELAAEEKAMKERGFYLHPS 222

[Close]

BLAST of CmaCh09G003970 vs. TAIR10
Match: AT5G08480.2 (AT5G08480.2 VQ motif-containing protein)

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-12
Identity = 60/162 (37.04%), Postives = 82/162 (50.62%), Query Frame = 1


Query: 22  TTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSSNPLPPATDHHTGPRRSP-FKL 81
           TTFVQ D N+FR++VQ+LTG             ++ +++   P AT   T  ++ P  KL
Sbjct: 17  TTFVQTDTNTFREIVQRLTG------------PTENNAAAATPEATVIKTAIQKRPTSKL 76

Query: 82  QERRHTIR-KLEI-----KLGPTGIFKNSPS-HPRRFDSPIPSPVTPLAVEFLFLRKPGV 141
            ERR  +R KLEI        PTG   +S S +     SP+ +P +  +   L   +P  
Sbjct: 77  HERRQCMRPKLEIVKPPLSFKPTGTTPSSKSGNTNLLTSPVGTPSSLFSNLSLIEGEP-- 136

Query: 142 ASPLTPPVTAEDKAIADGGFYLHPSPRSS---QPPELLNLFP 173
               T  +  E+KAI +  FYLHPSPRS      PELL LFP
Sbjct: 137 -DSCTTNIEEEEKAIKERRFYLHPSPRSKPGYTEPELLTLFP 163

[Close]

BLAST of CmaCh09G003970 vs. TAIR10
Match: AT5G53830.1 (AT5G53830.1 VQ motif-containing protein)

HSP 1 Score: 65.1 bits (157), Expect = 5.0e-11
Identity = 70/200 (35.00%), Postives = 90/200 (45.00%), Query Frame = 1


Query: 16  LPSTSPTTFVQADPNSFRDLVQKLTGFS-------GHSEKLPVTHLSKLSSSNPLPPATD 75
           L +  PTTFVQAD ++F+ +VQ LTG S        H    PV + +K  SS  +PP   
Sbjct: 43  LSNPYPTTFVQADTSTFKQVVQMLTGSSTDTTTGKHHEAPSPVNNNNK-GSSFSIPPI-- 102

Query: 76  HHTGPRRSPFKLQERRHT-----------IRKLEIKLGPTGIFK--NSPSHPRRFDSPIP 135
                + + FKL ERR             I  L ++     +F   NS  H     SP  
Sbjct: 103 ----KKTNSFKLYERRQNNNNMFAKNDLMINTLRLQNSQRLMFTGGNSSHHQSPRFSPRN 162

Query: 136 SPVTP---LAVEFLFLRKPGVASPLTP------------PV-----TAEDKAIADGGFYL 173
           S  +    L+   L   K G+ SP+TP            P+     + EDKAIAD GFYL
Sbjct: 163 SSSSENILLSPSMLDFPKLGLNSPVTPLRSNDDPFNKSSPLSLGNSSEEDKAIADKGFYL 222

[Close]

BLAST of CmaCh09G003970 vs. TAIR10
Match: AT3G15300.1 (AT3G15300.1 VQ motif-containing protein)

HSP 1 Score: 59.7 bits (143), Expect = 2.1e-09
Identity = 64/187 (34.22%), Postives = 79/187 (42.25%), Query Frame = 1


Query: 21  PTTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSSNPLPPATDHHTG-------- 80
           PTTFVQAD +SF+ +VQ LTG S           S  S  +P PP T    G        
Sbjct: 36  PTTFVQADSSSFKQVVQMLTGSS-----------SPRSPDSPRPPTTPSGKGNFVIPPIK 95

Query: 81  ----PRRSPFKLQERRH------------TIRKLEIKLGPTGIFKNSPSH-----PRRFD 140
                + S  KL ERR              I  L I  G  G  + SP +     P   D
Sbjct: 96  TAQPKKHSGNKLYERRSHGGFNNNLKNSLMINTLMIGGGGAGSPRFSPRNQEILSPSCLD 155

Query: 141 SP---IPSPVTPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPSPRSS---QPP 173
            P   + SPVTPL          G       P++ E++ IAD G+YLH SP S+     P
Sbjct: 156 FPKLALNSPVTPLKQGTN--GNEGDPFDKMSPLSEEERGIADKGYYLHRSPISTPRDSEP 209

[Close]

BLAST of CmaCh09G003970 vs. NCBI nr
Match: gi|659104146|ref|XP_008452821.1| (PREDICTED: uncharacterized protein LOC103493731 [Cucumis melo])

HSP 1 Score: 285.0 bits (728), Expect = 8.8e-74
Identity = 149/178 (83.71%), Postives = 153/178 (85.96%), Query Frame = 1


Query: 1   MEKHLTTVSSPPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSS 60
           MEKH    SSPPP    STSPTTFVQAD NSFRDLVQKLTGF+G SEKLPVTHLSKLSSS
Sbjct: 1   MEKHFIAASSPPP----STSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSS 60

Query: 61  NPLPP-ATDHHTGPRRSPFKLQERRHTIRKLEIKLGPTGIFKNS-PSHPRRFDSPIPSPV 120
            P PP A D+HTGPRRSPFKLQERRHTIRKLEIKL  TG FKNS PSH RR DSP+PSPV
Sbjct: 61  KPFPPLAADYHTGPRRSPFKLQERRHTIRKLEIKLSLTGPFKNSSPSHTRRVDSPVPSPV 120

Query: 121 TPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPSPRSSQPPELLNLFPSKFA 177
           TPLA E LF R+P VASPLTPPVTAEDKAIADG FYLHPSPRSSQPPELLNLFPSKFA
Sbjct: 121 TPLAAESLFFRRPSVASPLTPPVTAEDKAIADGEFYLHPSPRSSQPPELLNLFPSKFA 174

[Close]

BLAST of CmaCh09G003970 vs. NCBI nr
Match: gi|449455679|ref|XP_004145579.1| (PREDICTED: VQ motif-containing protein 11 [Cucumis sativus])

HSP 1 Score: 275.8 bits (704), Expect = 5.3e-71
Identity = 143/177 (80.79%), Postives = 151/177 (85.31%), Query Frame = 1


Query: 1   MEKHLTTVSSPPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHLSKLSSS 60
           ME+H+ T SSPPP    STSPTTFVQAD NSFRDLVQKLTGF+G SEKLPVTHLSKLSSS
Sbjct: 1   MERHVITASSPPP----STSPTTFVQADTNSFRDLVQKLTGFAGDSEKLPVTHLSKLSSS 60

Query: 61  NPLPP-ATDHHTGPRRSPFKLQERRHTIRKLEIKLGPTGIFKNS-PSHPRRFDSPIPSPV 120
            P PP A D+HTGPRRSPFKLQERRHTIRKLEI+L  T  FKNS PSH RR DSP+P PV
Sbjct: 61  KPFPPPAADYHTGPRRSPFKLQERRHTIRKLEIQLALTRPFKNSSPSHTRRVDSPVPGPV 120

Query: 121 TPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPSPRSSQPPELLNLFPSKF 176
           TPLA E LF R+P V SPL+PPVTAEDKAIAD GFYLHPSPRSSQPPELLNLFPSKF
Sbjct: 121 TPLAAESLFFRRPSVTSPLSPPVTAEDKAIADSGFYLHPSPRSSQPPELLNLFPSKF 173

[Close]

BLAST of CmaCh09G003970 vs. NCBI nr
Match: gi|802625696|ref|XP_012076396.1| (PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas])

HSP 1 Score: 180.3 bits (456), Expect = 3.0e-42
Identity = 109/185 (58.92%), Postives = 129/185 (69.73%), Query Frame = 1


Query: 1   MEKHLTTVSSPPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFSGHS-EKLPVTHLSKLSS 60
           ME+++ +  +P P     TSPTTFVQAD N+FRDLVQKLTG +G S EK PVT  +KLSS
Sbjct: 1   MERYINSSITPSP-----TSPTTFVQADTNTFRDLVQKLTGLAGDSSEKFPVTLPTKLSS 60

Query: 61  --SNPLPPATDHHTGPRRSPFKLQERR-HTIRKLEIKLGPTGIFKNSPSHPRRFDSPIPS 120
             S+P+ P     TGPRRS FKLQERR HTIRKLEI+LG T  F    +H  R +SPIPS
Sbjct: 61  KLSHPVDP-----TGPRRSSFKLQERRQHTIRKLEIELGLTSQFSFRKTH--RLESPIPS 120

Query: 121 PVTPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPS----PRSSQPPELLNLFP 178
           PVTPL+ + LF R PG  SP +P V+ E+KAIA+ GFYLHPS    PR S+PPELL LFP
Sbjct: 121 PVTPLSSDSLFFRSPGTESPSSPAVSEEEKAIAEKGFYLHPSPLTTPRGSEPPELLTLFP 173

[Close]

BLAST of CmaCh09G003970 vs. NCBI nr
Match: gi|255548680|ref|XP_002515396.1| (PREDICTED: VQ motif-containing protein 31 [Ricinus communis])

HSP 1 Score: 179.9 bits (455), Expect = 4.0e-42
Identity = 108/177 (61.02%), Postives = 123/177 (69.49%), Query Frame = 1


Query: 4   HLTTVSSPPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFSGHS-EKLPVTHLSKLSSSNP 63
           H+ T++SP       TSPTTFVQAD N+FRDLVQKLTG +G+S EKLP+T  ++LSS   
Sbjct: 5   HMNTMTSP-------TSPTTFVQADANTFRDLVQKLTGSTGNSSEKLPITLPTRLSSKLS 64

Query: 64  LPPATDHHTGPRRSPFKLQERRHTIRKLEIKLGPTGIFKNSPSHPRRFDSPIPSPVTPLA 123
            P  T   TGPRRSPFKLQERRHTIRKLEIKLG T   K     P R  S IPSPVTPL+
Sbjct: 65  HPVDT---TGPRRSPFKLQERRHTIRKLEIKLGLTSSHK-----PHRVSSTIPSPVTPLS 124

Query: 124 VEFLFLRKPGV---ASPLTPPVTAEDKAIADGGFYLHPS----PRSSQPPELLNLFP 173
            E LF R PG    +SP +P V+ EDKAIA+ GFYLHPS    PR  +PPELL LFP
Sbjct: 125 SESLFFRSPGTDQSSSPSSPAVSEEDKAIAEKGFYLHPSPLTTPRGGEPPELLTLFP 166

[Close]

BLAST of CmaCh09G003970 vs. NCBI nr
Match: gi|703144423|ref|XP_010108283.1| (hypothetical protein L484_007135 [Morus notabilis])

HSP 1 Score: 175.6 bits (444), Expect = 7.5e-41
Identity = 107/195 (54.87%), Postives = 128/195 (65.64%), Query Frame = 1


Query: 1   MEKHLTTVSS------PPPPPLPSTSPTTFVQADPNSFRDLVQKLTGFSGHSEKLPVTHL 60
           MEKH+ T+++      P  P   S +PTTFVQADPN+F+DLVQKLTG SG +EKLPVT  
Sbjct: 1   MEKHMKTMTTAIAAAAPTTPSPTSPAPTTFVQADPNTFKDLVQKLTGSSGDTEKLPVTLP 60

Query: 61  SKLSSSNPLPPATDHHTGPRRSPFKLQERRHTIRKLEIKL------GPTGI-------FK 120
           ++LSS    P      TGPRRSPFKLQ+RR T+RKLEIKL      G +G        + 
Sbjct: 61  TRLSSK---PSILVDPTGPRRSPFKLQDRRQTMRKLEIKLSLATIGGSSGTVPAPGYQYH 120

Query: 121 NSPSHPRRFDSPIPSPVTPLAVEFLFLRKPGVASPLTPPVTAEDKAIADGGFYLHPS--- 173
            SP      DSPIPSPVTPL  E LF+   G  SP +P V+ E++AIAD GFYLHPS   
Sbjct: 121 LSPRQIHWVDSPIPSPVTPLGSESLFVPSSGSPSPSSPAVSEEERAIADKGFYLHPSPLS 180

The following BLAST results are available for this feature:

BLAST of CmaCh09G003970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VQ11_ARATH	3.0e-13	39.64	VQ motif-containing protein 11 OS=Arabidopsis thaliana GN=VQ11 PE=1 SV=1	[more]
VQ4_ARATH	1.1e-12	35.53	VQ motif-containing protein 4 OS=Arabidopsis thaliana GN=VQ4 PE=1 SV=1	[more]
VQ31_ARATH	4.7e-11	37.04	VQ motif-containing protein 31 OS=Arabidopsis thaliana GN=VQ31 PE=1 SV=1	[more]
VQ33_ARATH	8.9e-10	35.00	VQ motif-containing protein 33 OS=Arabidopsis thaliana GN=VQ33 PE=1 SV=1	[more]
VQ19_ARATH	3.7e-08	34.22	VQ motif-containing protein 19 OS=Arabidopsis thaliana GN=VQ19 PE=1 SV=1	[more]

BLAST of CmaCh09G003970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L104_CUCSA	3.7e-71	80.79	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G651800 PE=4 SV=1	[more]
A0A067KEQ3_JATCU	2.1e-42	58.92	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07064 PE=4 SV=1	[more]
B9RNS7_RICCO	2.8e-42	61.02	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0920500 PE=4 SV=1	[more]
W9RZ63_9ROSA	5.2e-41	54.87	Uncharacterized protein OS=Morus notabilis GN=L484_007135 PE=4 SV=1	[more]
M5XSA3_PRUPE	9.8e-40	56.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020319mg PE=4 SV=1	[more]

BLAST of CmaCh09G003970 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80450.1	1.7e-14	39.64	VQ motif-containing protein	[more]
AT1G28280.1	6.3e-14	35.53	VQ motif-containing protein	[more]
AT5G08480.2	2.7e-12	37.04	VQ motif-containing protein	[more]
AT5G53830.1	5.0e-11	35.00	VQ motif-containing protein	[more]
AT3G15300.1	2.1e-09	34.22	VQ motif-containing protein	[more]

BLAST of CmaCh09G003970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659104146\|ref\|XP_008452821.1\|	8.8e-74	83.71	PREDICTED: uncharacterized protein LOC103493731 [Cucumis melo]	[more]
gi\|449455679\|ref\|XP_004145579.1\|	5.3e-71	80.79	PREDICTED: VQ motif-containing protein 11 [Cucumis sativus]	[more]
gi\|802625696\|ref\|XP_012076396.1\|	3.0e-42	58.92	PREDICTED: VQ motif-containing protein 31-like [Jatropha curcas]	[more]
gi\|255548680\|ref\|XP_002515396.1\|	4.0e-42	61.02	PREDICTED: VQ motif-containing protein 31 [Ricinus communis]	[more]
gi\|703144423\|ref\|XP_010108283.1\|	7.5e-41	54.87	hypothetical protein L484_007135 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008889	VQ

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G003970.1	CmaCh09G003970.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 19..45 score: 1.3
None	No IPR available	PANTHER	PTHR33402	FAMILY NOT NAMED	coord: 17..172 score: 2.2
None	No IPR available	PANTHER	PTHR33402:SF4	SUBFAMILY NOT NAMED	coord: 17..172 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G003970	Cucsa.271370	Cucumber (Gy14) v1	cgycmaB0750
CmaCh09G003970	Cla021044	Watermelon (97103) v1	cmawmB027
CmaCh09G003970	Csa4G651800	Cucumber (Chinese Long) v2	cmacuB020
CmaCh09G003970	MELO3C016947	Melon (DHL92) v3.5.1	cmameB040
CmaCh09G003970	ClCG05G016130	Watermelon (Charleston Gray)	cmawcgB022
CmaCh09G003970	CSPI04G26080	Wild cucumber (PI 183967)	cmacpiB020
CmaCh09G003970	CmoCh09G003980	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G003970	Lsi04G013520	Bottle gourd (USVL1VR-Ls)	cmalsiB024
CmaCh09G003970	Cp4.1LG06g02740	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G003970	MELO3C016947.2	Melon (DHL92) v3.6.1	cmamedB039
CmaCh09G003970	CsaV3_4G036400	Cucumber (Chinese Long) v3	cmacucB0027
CmaCh09G003970	Cla97C05G097090	Watermelon (97103) v2	cmawmbB027
CmaCh09G003970	Bhi09G002496	Wax gourd	cmawgoB0035
CmaCh09G003970	CsGy4G024390	Cucumber (Gy14) v2	cgybcmaB465
CmaCh09G003970	Carg02825	Silver-seed gourd	carcmaB0889

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G003970	Cucurbita maxima (Rimu)	cmacmaB037
CmaCh09G003970	Cucurbita maxima (Rimu)	cmacmaB051
CmaCh09G003970	Cucurbita maxima (Rimu)	cmacmaB066
CmaCh09G003970	Cucumber (Gy14) v1	cgycmaB0444
CmaCh09G003970	Cucurbita moschata (Rifu)	cmacmoB050
CmaCh09G003970	Cucurbita moschata (Rifu)	cmacmoB035
CmaCh09G003970	Cucurbita moschata (Rifu)	cmacmoB061
CmaCh09G003970	Wild cucumber (PI 183967)	cmacpiB012
CmaCh09G003970	Cucumber (Chinese Long) v2	cmacuB013
CmaCh09G003970	Melon (DHL92) v3.5.1	cmameB025
CmaCh09G003970	Watermelon (Charleston Gray)	cmawcgB037
CmaCh09G003970	Watermelon (97103) v1	cmawmB021
CmaCh09G003970	Cucurbita pepo (Zucchini)	cmacpeB028
CmaCh09G003970	Cucurbita pepo (Zucchini)	cmacpeB045
CmaCh09G003970	Cucurbita pepo (Zucchini)	cmacpeB068
CmaCh09G003970	Bottle gourd (USVL1VR-Ls)	cmalsiB022
CmaCh09G003970	Bottle gourd (USVL1VR-Ls)	cmalsiB039
CmaCh09G003970	Cucumber (Gy14) v2	cgybcmaB149
CmaCh09G003970	Melon (DHL92) v3.6.1	cmamedB026
CmaCh09G003970	Silver-seed gourd	carcmaB0182
CmaCh09G003970	Silver-seed gourd	carcmaB1065
CmaCh09G003970	Silver-seed gourd	carcmaB1346
CmaCh09G003970	Cucumber (Chinese Long) v3	cmacucB0016
CmaCh09G003970	Watermelon (97103) v2	cmawmbB043
CmaCh09G003970	Wax gourd	cmawgoB0017