CmaCh09G003820 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G003820
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Eukaryotic initiation factor 4F subunit p150 isoform 2
Location	Cma_Chr09 : 1600114 .. 1601451 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGCTGTTTTTACAGAGAAGGTAAATGCTTTACCTTTTGCTGTAAAAATGGACTGTTCAGTTGAGAATTTACCTCAACTCTGCTCTGAATCTGCTTCTGAGTTCCTCAGTTGTTCAAATTTCATCCAATGGGTGAATTGCAGCATAAGGTTGTCCCTTTACTCTGAAAAGTCTGCAGAGTGAATAGGCAAATTTTATTATTTTTATTATTATATATATATATATATATCAGAAATTAATATTACATATACTGTTTTTTTCCTTTTTTTTATTATTTTTTATTATCGGCGTGCTAATATATTAATATGTAATTTTGATTTTTAGTATAATATGTAATTTTAGGTAAATGTTTTATTTTATATTATTTCAAAACTAAAAATACAAAAAATCAAAACTTCGTTTGGGGGCAAATAAAATTGGTTAGTTCATTCAGGCAAATTTCTTTCCCGCTTAAAATTATCCAACAAAATGAACAGACGCAAATATACTCTCTAAGAGAGGAATATTGATGATCGTTTTCCCTTTTTCACTGGATTTTCAGAGCGAACTTCTATATATTAGTCTCGAAAACTTCATCTGCTTCGATGAAGATGATGGTCTCGAATGGATATGCCGGCAGAGGAAGCAGTAGTTGTGGATACGATGGTAGAAATTCGATTAGAAACAAGATTCACAAGCGATTGGAACCTTGTTTGGTGATACCGCCGCCGCGAGGTAAGCTGCTTGGCGCTATCATTAAGTTCCTCGATGGCGCTATCATCGGAGCTATTCCTGAAGTCACTTGCAGGTTTTTTTCCCTTCCGTTTCTTCGCTATCATTTGTATTTCGATGTAGCTACTTTATTTGAGCTTTTGGCAAAGGAAGGGTTTCTGATAATTTCAGTACCTTACAAATTGAGTTTCGATCATGCCATTGCTGCGAGACAAGTATTCGAGAGGTTTCATGGCCGTTTGGATGCCATTTTAGCGTCCGGATTGCTCCATGAAGATGTTTCACATGCTCAACTTGTTAACCTTTCTCTACCGTGGATCATAGGTGAGTCAACTCGTGATTGTTGTCTTCATTTCCATAGGATGAAATGCTGAGGTAATTTCATTTTGTTGTTTATTGGTAGCAATGGCGCGCTTCCGCAAGTACTCACAGGGAGCTATTTCGCCGCGAAGATACCTAAGGTTTGGCTTCTTACTTTTCTTTTGATTGTTCGTCTTTTAATTTACTTGTGGAAATGAATTGGACGCAACTGACTAGCTAATCACCGAGATGATAATTTTCTTATCAATTTCAATGGTTGTGTGACATAATAAATATTCTCGTTGTGGAAGGACAATGCTATGA

mRNA sequence

ATGAAGGCTGTTTTTACAGAGAAGGTAAATGCTTTACCTTTTGCTGTAAAAATGGACTGTTCAGTTGAGAATTTACCTCAACTCTGCTCTGAATCTGCTTCTGAGTTCCTCAGTTGTTCAAATTTCATCCAATGGGTGAATTGCAGCATAAGAGCGAACTTCTATATATTAGTCTCGAAAACTTCATCTGCTTCGATGAAGATGATGGTCTCGAATGGATATGCCGGCAGAGGAAGCAGTAGTTGTGGATACGATGGTAGAAATTCGATTAGAAACAAGATTCACAAGCGATTGGAACCTTGTTTGGTGATACCGCCGCCGCGAGGTAAGCTGCTTGGCGCTATCATTAAGTTCCTCGATGGCGCTATCATCGGAGCTATTCCTGAAGTCACTTGCAGGTTTTTTTCCCTTCCGTTTCTTCGCTATCATTTGTATTTCGATGTAGCTACTTTATTTGAGCTTTTGGCAAAGGAAGGGTTTCTGATAATTTCAGTACCTTACAAATTGAGTTTCGATCATGCCATTGCTGCGAGACAAGTATTCGAGAGGTTTCATGGCCGTTTGGATGCCATTTTAGCGTCCGGATTGCTCCATGAAGATGTTTCACATGCTCAACTTGTTAACCTTTCTCTACCGTGGATCATAGCAATGGCGCGCTTCCGCAAGTACTCACAGGGAGCTATTTCGCCGCGAAGATACCTAAGGACAATGCTATGA

Coding sequence (CDS)

ATGAAGGCTGTTTTTACAGAGAAGGTAAATGCTTTACCTTTTGCTGTAAAAATGGACTGTTCAGTTGAGAATTTACCTCAACTCTGCTCTGAATCTGCTTCTGAGTTCCTCAGTTGTTCAAATTTCATCCAATGGGTGAATTGCAGCATAAGAGCGAACTTCTATATATTAGTCTCGAAAACTTCATCTGCTTCGATGAAGATGATGGTCTCGAATGGATATGCCGGCAGAGGAAGCAGTAGTTGTGGATACGATGGTAGAAATTCGATTAGAAACAAGATTCACAAGCGATTGGAACCTTGTTTGGTGATACCGCCGCCGCGAGGTAAGCTGCTTGGCGCTATCATTAAGTTCCTCGATGGCGCTATCATCGGAGCTATTCCTGAAGTCACTTGCAGGTTTTTTTCCCTTCCGTTTCTTCGCTATCATTTGTATTTCGATGTAGCTACTTTATTTGAGCTTTTGGCAAAGGAAGGGTTTCTGATAATTTCAGTACCTTACAAATTGAGTTTCGATCATGCCATTGCTGCGAGACAAGTATTCGAGAGGTTTCATGGCCGTTTGGATGCCATTTTAGCGTCCGGATTGCTCCATGAAGATGTTTCACATGCTCAACTTGTTAACCTTTCTCTACCGTGGATCATAGCAATGGCGCGCTTCCGCAAGTACTCACAGGGAGCTATTTCGCCGCGAAGATACCTAAGGACAATGCTATGA

Protein sequence

MKAVFTEKVNALPFAVKMDCSVENLPQLCSESASEFLSCSNFIQWVNCSIRANFYILVSKTSSASMKMMVSNGYAGRGSSSCGYDGRNSIRNKIHKRLEPCLVIPPPRGKLLGAIIKFLDGAIIGAIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAARQVFERFHGRLDAILASGLLHEDVSHAQLVNLSLPWIIAMARFRKYSQGAISPRRYLRTML

Homology

[Close]

BLAST of CmaCh09G003820 vs. TrEMBL
Match: A0A0A0L5H3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649660 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 6.8e-36
Identity = 94/154 (61.04%), Postives = 103/154 (66.88%), Query Frame = 1


Query: 58  VSKTSSASMKMMVSNGYAGRGSSSCGYDGRNSIRNKIHKRLEPCLVIPPPRGKLLGAIIK 117
           VS TSSA MK M+SNGY           GRNS  NKI+K+LE CLVIPPPRG+   AIIK
Sbjct: 63  VSGTSSAFMKTMISNGYG----------GRNSNVNKIYKQLESCLVIPPPRGRPPRAIIK 122

Query: 118 FLDGAIIGAIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAA 177
           FL GA IGAIPEVT  +                L E LAKEGFLIISVPY ++FDHA AA
Sbjct: 123 FLGGAFIGAIPEVTYSY----------------LIEFLAKEGFLIISVPYNVTFDHADAA 182

Query: 178 RQVFERFHGRLDAILASGLLHEDVSHAQLVNLSL 212
           RQVFERFH  LD +LASGL  ED+S AQLVNL L
Sbjct: 183 RQVFERFHVCLDTVLASGLPDEDISPAQLVNLPL 190

[Close]

BLAST of CmaCh09G003820 vs. TrEMBL
Match: A0A067KQ96_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07570 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.0e-28
Identity = 80/159 (50.31%), Postives = 99/159 (62.26%), Query Frame = 1


Query: 55  YILVSKTSSASMKMMVSNGYAGRGSS-SCGYDGRNSIRNK-IHKRLEPCLVIPPPRGKLL 114
           +I   +   +S   +VSNGY GR SS S  Y+  N+ RNK I+  ++ CL IPPP+GK  
Sbjct: 30  WISTHRIKKSSFTKLVSNGYVGRSSSNSFTYNATNNNRNKKIYTSIDSCLAIPPPKGKNT 89

Query: 115 GAIIKFLDGAIIGAIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFD 174
            AIIKFL GA IGA+PEVT  +                L ELLAKEGFLII VPY ++FD
Sbjct: 90  RAIIKFLGGAFIGAVPEVTYGY----------------LIELLAKEGFLIILVPYNVTFD 149

Query: 175 HAIAARQVFERFHGRLDAILASGLLHEDVSHAQLVNLSL 212
           HA AA QV+ERF+  LD IL SGL   D++ AQLV L +
Sbjct: 150 HAHAANQVYERFNTCLDLILTSGLPDADLTAAQLVGLPI 172

[Close]

BLAST of CmaCh09G003820 vs. TrEMBL
Match: B9HCN9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s23430g PE=4 SV=2)

HSP 1 Score: 132.1 bits (331), Expect = 8.9e-28
Identity = 79/161 (49.07%), Postives = 104/161 (64.60%), Query Frame = 1


Query: 59  SKTS-SASMKMMVSNGYAGRGSSSCGY-DGRNSIRNKIHKR------LEPCLVIPPPRGK 118
           SKTS S+S+  MVSNGYAGR SS+  Y DG   I N  +K+      +E CLVIPPP+G+
Sbjct: 44  SKTSGSSSLSRMVSNGYAGRSSSNFRYGDGNTVITNTNYKQRQKYTQMESCLVIPPPKGR 103

Query: 119 LLGAIIKFLDGAIIGAIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLS 178
              AIIKFL GA IGA+PEVT                 + L ELLAK+G+++I VPY ++
Sbjct: 104 KPRAIIKFLGGAFIGAVPEVT----------------YSCLIELLAKDGYVVILVPYNVT 163

Query: 179 FDHAIAARQVFERFHGRLDAILASGLLHEDVSHAQLVNLSL 212
           FDH+ AA QV+ERF+  LD +L SGL H+ ++ ++LV L L
Sbjct: 164 FDHSKAADQVYERFNACLDLLLQSGLPHDGLTASELVGLPL 188

[Close]

BLAST of CmaCh09G003820 vs. TrEMBL
Match: F6H2U7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g02280 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.7e-26
Identity = 78/150 (52.00%), Postives = 96/150 (64.00%), Query Frame = 1


Query: 62  SSASMKMMVSNGYAGRGSSSCGYDGRNSIRNKIHKRLEPCLVIPPPRGKLLGAIIKFLDG 121
           SSAS+KM VSNGY  R S S GY       N+I+KR++ CLVIPPP+GK   AII+FL G
Sbjct: 45  SSASVKM-VSNGYVRRDSYS-GYS------NRIYKRVDSCLVIPPPKGKKPTAIIEFLGG 104

Query: 122 AIIGAIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAARQVF 181
           A IGA+PEVT  +                L ELLA EGFLIISVPY ++FDHA A R+++
Sbjct: 105 AFIGAVPEVTYSY----------------LIELLANEGFLIISVPYNVTFDHAQATREIY 164

Query: 182 ERFHGRLDAILASGLLHEDVSHAQLVNLSL 212
           ERF+  LD IL SGL    +S ++L  L L
Sbjct: 165 ERFNSCLDTILTSGLPDASLSASELACLPL 170

[Close]

BLAST of CmaCh09G003820 vs. TrEMBL
Match: A0A059CUG0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03178 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 4.9e-26
Identity = 72/149 (48.32%), Postives = 93/149 (62.42%), Query Frame = 1


Query: 66  MKMMVSNGYAGRGSSSCGYDGRNSI---RNKIHKRLEPCLVIPPPRGKLLGAIIKFLDGA 125
           ++ MVS+GY G G          ++   R KI+KRL+ CLVIPPP G+   AI+KFL GA
Sbjct: 54  LRHMVSDGYVGSGGFGVSTKADGALGNGRGKIYKRLDSCLVIPPPGGRKPRAIVKFLGGA 113

Query: 126 IIGAIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAARQVFE 185
            IGA+PEVT  +                L ELLAKEGFLII+VPY ++FDHA AA +V+E
Sbjct: 114 FIGAVPEVTYSY----------------LIELLAKEGFLIIAVPYNVTFDHARAASEVYE 173

Query: 186 RFHGRLDAILASGLLHEDVSHAQLVNLSL 212
           +FH  LD +L SGL  + +S A LV+L L
Sbjct: 174 KFHCCLDNVLTSGLPDDKLSAADLVDLPL 186

[Close]

BLAST of CmaCh09G003820 vs. TAIR10
Match: AT3G43540.1 (AT3G43540.1 Protein of unknown function (DUF1350))

HSP 1 Score: 105.1 bits (261), Expect = 5.9e-23
Identity = 57/124 (45.97%), Postives = 80/124 (64.52%), Query Frame = 1


Query: 89  SIRNKIHKRLEPCLVIPPP-RGKLLGAIIKFLDGAIIGAIPEVTCRFFSLPFLRYHLYFD 148
           S  NK++ RL+ CLVIPPP + K   AI+KFL GA +GA+PE+T  +             
Sbjct: 38  SRNNKVYTRLDSCLVIPPPPKFKKPRAIVKFLGGAFVGAVPELTYSY------------- 97

Query: 149 VATLFELLAKEGFLIISVPYKLSFDHAIAARQVFERFHGRLDAILASGLLHEDVSHAQLV 208
              L ELLAKEG+LI+SVPY ++FDH  AA+QV+ERF+  LD I++SG+ + ++    L 
Sbjct: 98  ---LKELLAKEGYLIVSVPYNVTFDHEQAAKQVYERFNSCLDTIVSSGIPNSNLKPGDLA 145

Query: 209 NLSL 212
           +L L
Sbjct: 158 DLPL 145

[Close]

BLAST of CmaCh09G003820 vs. NCBI nr
Match: gi|449447195|ref|XP_004141354.1| (PREDICTED: uncharacterized protein LOC101217829 isoform X2 [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 9.7e-36
Identity = 94/154 (61.04%), Postives = 103/154 (66.88%), Query Frame = 1


Query: 58  VSKTSSASMKMMVSNGYAGRGSSSCGYDGRNSIRNKIHKRLEPCLVIPPPRGKLLGAIIK 117
           VS TSSA MK M+SNGY           GRNS  NKI+K+LE CLVIPPPRG+   AIIK
Sbjct: 63  VSGTSSAFMKTMISNGYG----------GRNSNVNKIYKQLESCLVIPPPRGRPPRAIIK 122

Query: 118 FLDGAIIGAIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAA 177
           FL GA IGAIPEVT  +                L E LAKEGFLIISVPY ++FDHA AA
Sbjct: 123 FLGGAFIGAIPEVTYSY----------------LIEFLAKEGFLIISVPYNVTFDHADAA 182

Query: 178 RQVFERFHGRLDAILASGLLHEDVSHAQLVNLSL 212
           RQVFERFH  LD +LASGL  ED+S AQLVNL L
Sbjct: 183 RQVFERFHVCLDTVLASGLPDEDISPAQLVNLPL 190

[Close]

BLAST of CmaCh09G003820 vs. NCBI nr
Match: gi|778696802|ref|XP_011654211.1| (PREDICTED: uncharacterized protein LOC101217829 isoform X3 [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 9.7e-36
Identity = 94/154 (61.04%), Postives = 103/154 (66.88%), Query Frame = 1


Query: 58  VSKTSSASMKMMVSNGYAGRGSSSCGYDGRNSIRNKIHKRLEPCLVIPPPRGKLLGAIIK 117
           VS TSSA MK M+SNGY           GRNS  NKI+K+LE CLVIPPPRG+   AIIK
Sbjct: 63  VSGTSSAFMKTMISNGYG----------GRNSNVNKIYKQLESCLVIPPPRGRPPRAIIK 122

Query: 118 FLDGAIIGAIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAA 177
           FL GA IGAIPEVT  +                L E LAKEGFLIISVPY ++FDHA AA
Sbjct: 123 FLGGAFIGAIPEVTYSY----------------LIEFLAKEGFLIISVPYNVTFDHADAA 182

Query: 178 RQVFERFHGRLDAILASGLLHEDVSHAQLVNLSL 212
           RQVFERFH  LD +LASGL  ED+S AQLVNL L
Sbjct: 183 RQVFERFHVCLDTVLASGLPDEDISPAQLVNLPL 190

[Close]

BLAST of CmaCh09G003820 vs. NCBI nr
Match: gi|778696797|ref|XP_011654210.1| (PREDICTED: uncharacterized protein LOC101217829 isoform X1 [Cucumis sativus])

HSP 1 Score: 159.1 bits (401), Expect = 9.7e-36
Identity = 94/154 (61.04%), Postives = 103/154 (66.88%), Query Frame = 1


Query: 58  VSKTSSASMKMMVSNGYAGRGSSSCGYDGRNSIRNKIHKRLEPCLVIPPPRGKLLGAIIK 117
           VS TSSA MK M+SNGY           GRNS  NKI+K+LE CLVIPPPRG+   AIIK
Sbjct: 63  VSGTSSAFMKTMISNGYG----------GRNSNVNKIYKQLESCLVIPPPRGRPPRAIIK 122

Query: 118 FLDGAIIGAIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAA 177
           FL GA IGAIPEVT  +                L E LAKEGFLIISVPY ++FDHA AA
Sbjct: 123 FLGGAFIGAIPEVTYSY----------------LIEFLAKEGFLIISVPYNVTFDHADAA 182

Query: 178 RQVFERFHGRLDAILASGLLHEDVSHAQLVNLSL 212
           RQVFERFH  LD +LASGL  ED+S AQLVNL L
Sbjct: 183 RQVFERFHVCLDTVLASGLPDEDISPAQLVNLPL 190

[Close]

BLAST of CmaCh09G003820 vs. NCBI nr
Match: gi|659104092|ref|XP_008452806.1| (PREDICTED: uncharacterized protein LOC103493718 isoform X2 [Cucumis melo])

HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35
Identity = 94/154 (61.04%), Postives = 103/154 (66.88%), Query Frame = 1


Query: 58  VSKTSSASMKMMVSNGYAGRGSSSCGYDGRNSIRNKIHKRLEPCLVIPPPRGKLLGAIIK 117
           VS TSSASMK M+SNGY           GRNS   KI+K+LE CLVIPPPRGK   AIIK
Sbjct: 63  VSGTSSASMKKMISNGYG----------GRNSNVKKIYKQLESCLVIPPPRGKPPRAIIK 122

Query: 118 FLDGAIIGAIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAA 177
           FL GA IGAIPEV+  +                L E LAKEGFLIISVPY ++FDHA AA
Sbjct: 123 FLGGAFIGAIPEVSYSY----------------LIEFLAKEGFLIISVPYNVTFDHANAA 182

Query: 178 RQVFERFHGRLDAILASGLLHEDVSHAQLVNLSL 212
           RQVFERFH  LD ILASGL  ED+S +QLVNL L
Sbjct: 183 RQVFERFHVCLDTILASGLPDEDISPSQLVNLPL 190

[Close]

BLAST of CmaCh09G003820 vs. NCBI nr
Match: gi|659104090|ref|XP_008452805.1| (PREDICTED: uncharacterized protein LOC103493718 isoform X1 [Cucumis melo])

HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35
Identity = 94/154 (61.04%), Postives = 103/154 (66.88%), Query Frame = 1


Query: 58  VSKTSSASMKMMVSNGYAGRGSSSCGYDGRNSIRNKIHKRLEPCLVIPPPRGKLLGAIIK 117
           VS TSSASMK M+SNGY           GRNS   KI+K+LE CLVIPPPRGK   AIIK
Sbjct: 63  VSGTSSASMKKMISNGYG----------GRNSNVKKIYKQLESCLVIPPPRGKPPRAIIK 122

Query: 118 FLDGAIIGAIPEVTCRFFSLPFLRYHLYFDVATLFELLAKEGFLIISVPYKLSFDHAIAA 177
           FL GA IGAIPEV+  +                L E LAKEGFLIISVPY ++FDHA AA
Sbjct: 123 FLGGAFIGAIPEVSYSY----------------LIEFLAKEGFLIISVPYNVTFDHANAA 182

Query: 178 RQVFERFHGRLDAILASGLLHEDVSHAQLVNLSL 212
           RQVFERFH  LD ILASGL  ED+S +QLVNL L
Sbjct: 183 RQVFERFHVCLDTILASGLPDEDISPSQLVNLPL 190

The following BLAST results are available for this feature:

BLAST of CmaCh09G003820 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh09G003820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5H3_CUCSA	6.8e-36	61.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649660 PE=4 SV=1	[more]
A0A067KQ96_JATCU	4.0e-28	50.31	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07570 PE=4 SV=1	[more]
B9HCN9_POPTR	8.9e-28	49.07	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s23430g PE=4 SV=2	[more]
F6H2U7_VITVI	3.7e-26	52.00	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0008g02280 PE=4 SV=...	[more]
A0A059CUG0_EUCGR	4.9e-26	48.32	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03178 PE=4 SV=1	[more]

BLAST of CmaCh09G003820 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G43540.1	5.9e-23	45.97	Protein of unknown function (DUF1350)	[more]

BLAST of CmaCh09G003820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447195\|ref\|XP_004141354.1\|	9.7e-36	61.04	PREDICTED: uncharacterized protein LOC101217829 isoform X2 [Cucumis sativus]	[more]
gi\|778696802\|ref\|XP_011654211.1\|	9.7e-36	61.04	PREDICTED: uncharacterized protein LOC101217829 isoform X3 [Cucumis sativus]	[more]
gi\|778696797\|ref\|XP_011654210.1\|	9.7e-36	61.04	PREDICTED: uncharacterized protein LOC101217829 isoform X1 [Cucumis sativus]	[more]
gi\|659104092\|ref\|XP_008452806.1\|	2.2e-35	61.04	PREDICTED: uncharacterized protein LOC103493718 isoform X2 [Cucumis melo]	[more]
gi\|659104090\|ref\|XP_008452805.1\|	2.2e-35	61.04	PREDICTED: uncharacterized protein LOC103493718 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010765	DUF1350

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G003820.1	CmaCh09G003820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010765	Protein of unknown function DUF1350	PFAM	PF07082	DUF1350	coord: 114..196 score: 5.
None	No IPR available	PANTHER	PTHR34127	FAMILY NOT NAMED	coord: 67..134 score: 1.5E-30coord: 151..196 score: 1.5
None	No IPR available	PANTHER	PTHR34127:SF1	SUBFAMILY NOT NAMED	coord: 151..196 score: 1.5E-30coord: 67..134 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G003820	Cucsa.271220	Cucumber (Gy14) v1	cgycmaB0750
CmaCh09G003820	Csa4G649660	Cucumber (Chinese Long) v2	cmacuB020
CmaCh09G003820	MELO3C016932	Melon (DHL92) v3.5.1	cmameB040
CmaCh09G003820	ClCG05G015960	Watermelon (Charleston Gray)	cmawcgB022
CmaCh09G003820	CSPI04G25910	Wild cucumber (PI 183967)	cmacpiB020
CmaCh09G003820	CmoCh01G017410	Cucurbita moschata (Rifu)	cmacmoB050
CmaCh09G003820	Lsi04G013680	Bottle gourd (USVL1VR-Ls)	cmalsiB024
CmaCh09G003820	Cp4.1LG02g05690	Cucurbita pepo (Zucchini)	cmacpeB045
CmaCh09G003820	MELO3C016932.2	Melon (DHL92) v3.6.1	cmamedB039
CmaCh09G003820	CsaV3_4G036230	Cucumber (Chinese Long) v3	cmacucB0027
CmaCh09G003820	Cla97C05G096930	Watermelon (97103) v2	cmawmbB027
CmaCh09G003820	Bhi09G002514	Wax gourd	cmawgoB0035
CmaCh09G003820	Carg10734	Silver-seed gourd	carcmaB1065

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh09G003820	CmaCh01G016880	Cucurbita maxima (Rimu)	cmacmaB051

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G003820	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G003820	Watermelon (97103) v1	cmawmB027
CmaCh09G003820	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G003820	Cucumber (Gy14) v2	cgybcmaB465
CmaCh09G003820	Silver-seed gourd	carcmaB0889