CmaCh09G002830 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G002830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	30S ribosomal protein S7, chloroplastic
Location	Cma_Chr09 : 1163315 .. 1163782 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAAGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

mRNA sequence

ATGTCACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAAGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

Coding sequence (CDS)

ATGTCACGTCGAGGTACTGCAGAAGAAAAAATTGCAAAATCCGATCCAATTTATCGTAATCGATTAGTTAACATGTTGGTTAACCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCCATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAGGCAAGACGTGTAAGCGGATCAACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGTAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA

Protein sequence

MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR

Homology

[Close]

BLAST of CmaCh09G002830 vs. Swiss-Prot
Match: RR7_MANES (30S ribosomal protein S7, chloroplastic OS=Manihot esculenta GN=rps7-A PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-78
Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRV GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. Swiss-Prot
Match: RR7_EUCGG (30S ribosomal protein S7, chloroplastic OS=Eucalyptus globulus subsp. globulus GN=rps7-A PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.8e-78
Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRV GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. Swiss-Prot
Match: RR7_SOYBN (30S ribosomal protein S7, chloroplastic OS=Glycine max GN=rps7-A PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 2.3e-78
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRV GSTHQVP+EIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPVEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. Swiss-Prot
Match: RR7_EUOAL (30S ribosomal protein S7, chloroplastic OS=Euonymus alatus GN=rps7 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 3.0e-78
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQI+YRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRV GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. Swiss-Prot
Match: RR7_LEPVR (30S ribosomal protein S7, chloroplastic OS=Lepidium virginicum GN=rps7-A PE=3 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 3.9e-78
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRV GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. TrEMBL
Match: A0A0S2IDZ0_9ROSI (Ribosomal protein S7 OS=Cucurbita argyrosperma var. palmeri GN=rps7 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.8e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. TrEMBL
Match: A0A0S2IE68_9ROSI (Ribosomal protein S7 OS=Cucurbita argyrosperma subsp. sororia GN=rps7 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.8e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. TrEMBL
Match: A0A0S2IE92_9ROSI (Ribosomal protein S7 OS=Cucurbita ecuadorensis GN=rps7 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.8e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. TrEMBL
Match: A0A0S2IGC7_9ROSI (Ribosomal protein S7 OS=Cucurbita lundelliana GN=rps7 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.8e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. TrEMBL
Match: A0A0S2IH14_CUCPE (Ribosomal protein S7 OS=Cucurbita pepo subsp. pepo GN=rps7 PE=3 SV=1)

HSP 1 Score: 296.6 bits (758), Expect = 1.8e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. TAIR10
Match: ATCG01240.1 (ATCG01240.1 ribosomal protein S7)

HSP 1 Score: 292.0 bits (746), Expect = 2.2e-79
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRV GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. TAIR10
Match: ATCG00900.1 (ATCG00900.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 292.0 bits (746), Expect = 2.2e-79
Identity = 152/155 (98.06%), Postives = 153/155 (98.71%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRA+KKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRV GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. TAIR10
Match: AT2G07696.1 (AT2G07696.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 71.6 bits (174), Expect = 4.7e-13
Identity = 45/140 (32.14%), Postives = 79/140 (56.43%), Query Frame = 1


Query: 22  LVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVS 81
           L+  LVN  +K GK++    I+Y+   +   +TE + + ++  A+  + P   V    V+
Sbjct: 11  LIKKLVNFRMKEGKRTRVRAIVYQTFHR-PARTERDVIKLMVDAVENIKPICEVAKVGVA 70

Query: 82  GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAI 141
           G+ + VP  +   + + LAIRW+L A+ KR    +++++S      +E++DA +  G A 
Sbjct: 71  GTIYDVPGIVARDRQQTLAIRWILEAAFKR---RISYRISLEKCSFAEILDAYQKRGSAR 130

Query: 142 RKKEETHRMAEANRAFAHFR 156
           RK+E  H +A  NR+FAHFR
Sbjct: 131 RKRENLHGLASTNRSFAHFR 146

[Close]

BLAST of CmaCh09G002830 vs. TAIR10
Match: ATMG01270.1 (ATMG01270.1 mitochondrial ribosomal protein S7)

HSP 1 Score: 71.6 bits (174), Expect = 4.7e-13
Identity = 45/140 (32.14%), Postives = 79/140 (56.43%), Query Frame = 1


Query: 22  LVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVS 81
           L+  LVN  +K GK++    I+Y+   +   +TE + + ++  A+  + P   V    V+
Sbjct: 11  LIKKLVNFRMKEGKRTRVRAIVYQTFHR-PARTERDVIKLMVDAVENIKPICEVAKVGVA 70

Query: 82  GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAI 141
           G+ + VP  +   + + LAIRW+L A+ KR    +++++S      +E++DA +  G A 
Sbjct: 71  GTIYDVPGIVARDRQQTLAIRWILEAAFKR---RISYRISLEKCSFAEILDAYQKRGSAR 130

Query: 142 RKKEETHRMAEANRAFAHFR 156
           RK+E  H +A  NR+FAHFR
Sbjct: 131 RKRENLHGLASTNRSFAHFR 146

[Close]

BLAST of CmaCh09G002830 vs. TAIR10
Match: AT2G37270.1 (AT2G37270.1 ribosomal protein 5B)

HSP 1 Score: 54.3 bits (129), Expect = 7.8e-08
Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 1


Query: 21  RLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80
           RL N L+     +GKK +A +I+  AM+ I   ++ NP+ V+  AI    P         
Sbjct: 74  RLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGS 133

Query: 81  SGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD--AI 140
           +G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  AI
Sbjct: 134 AGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAI 193

Query: 141 RKKEETHRMAEANR 150
           +KK+E  R+A+ANR
Sbjct: 194 KKKDEIERVAKANR 207

[Close]

BLAST of CmaCh09G002830 vs. NCBI nr
Match: gi|952954389|gb|ALO21753.1| (ribosomal protein S7 (plastid) [Cucurbita argyrosperma])

HSP 1 Score: 296.6 bits (758), Expect = 2.5e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. NCBI nr
Match: gi|346578237|ref|YP_004841829.1| (ribosomal protein S7 [Cucumis melo subsp. melo])

HSP 1 Score: 295.0 bits (754), Expect = 7.4e-77
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRV GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. NCBI nr
Match: gi|984914471|gb|AMC32664.1| (ribosomal protein S7 (chloroplast) [Euphorbia marginata])

HSP 1 Score: 294.7 bits (753), Expect = 9.7e-77
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. NCBI nr
Match: gi|317046218|ref|YP_004072507.1| (ribosomal protein S7 [Corynocarpus laevigata])

HSP 1 Score: 294.3 bits (752), Expect = 1.3e-76
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQI+YRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRV GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

[Close]

BLAST of CmaCh09G002830 vs. NCBI nr
Match: gi|108802686|ref|YP_636344.1| (ribosomal protein S7 (chloroplast) [Eucalyptus globulus subsp. globulus])

HSP 1 Score: 293.1 bits (749), Expect = 2.8e-76
Identity = 153/155 (98.71%), Postives = 153/155 (98.71%), Query Frame = 1


Query: 1   MSRRGTAEEKIAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60
           MSRRGTAEEK AKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS
Sbjct: 1   MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLS 60

Query: 61  VLRQAIRGVTPDIAVKARRVSGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
           VLRQAIRGVTPDIAVKARRV GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61  VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120

Query: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 156
           SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155

The following BLAST results are available for this feature:

BLAST of CmaCh09G002830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RR7_MANES	1.8e-78	98.71	30S ribosomal protein S7, chloroplastic OS=Manihot esculenta GN=rps7-A PE=3 SV=1	[more]
RR7_EUCGG	1.8e-78	98.71	30S ribosomal protein S7, chloroplastic OS=Eucalyptus globulus subsp. globulus G...	[more]
RR7_SOYBN	2.3e-78	98.06	30S ribosomal protein S7, chloroplastic OS=Glycine max GN=rps7-A PE=3 SV=1	[more]
RR7_EUOAL	3.0e-78	98.06	30S ribosomal protein S7, chloroplastic OS=Euonymus alatus GN=rps7 PE=3 SV=1	[more]
RR7_LEPVR	3.9e-78	98.06	30S ribosomal protein S7, chloroplastic OS=Lepidium virginicum GN=rps7-A PE=3 SV...	[more]

BLAST of CmaCh09G002830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0S2IDZ0_9ROSI	1.8e-77	100.00	Ribosomal protein S7 OS=Cucurbita argyrosperma var. palmeri GN=rps7 PE=3 SV=1	[more]
A0A0S2IE68_9ROSI	1.8e-77	100.00	Ribosomal protein S7 OS=Cucurbita argyrosperma subsp. sororia GN=rps7 PE=3 SV=1	[more]
A0A0S2IE92_9ROSI	1.8e-77	100.00	Ribosomal protein S7 OS=Cucurbita ecuadorensis GN=rps7 PE=3 SV=1	[more]
A0A0S2IGC7_9ROSI	1.8e-77	100.00	Ribosomal protein S7 OS=Cucurbita lundelliana GN=rps7 PE=3 SV=1	[more]
A0A0S2IH14_CUCPE	1.8e-77	100.00	Ribosomal protein S7 OS=Cucurbita pepo subsp. pepo GN=rps7 PE=3 SV=1	[more]

BLAST of CmaCh09G002830 vs. TAIR10


Match Name	E-value	Identity	Description
ATCG01240.1	2.2e-79	98.06	ATCG01240.1 ribosomal protein S7	[more]
ATCG00900.1	2.2e-79	98.06	ATCG00900.1 Ribosomal protein S7p/S5e family protein	[more]
AT2G07696.1	4.7e-13	32.14	Ribosomal protein S7p/S5e family protein	[more]
ATMG01270.1	4.7e-13	32.14	ATMG01270.1 mitochondrial ribosomal protein S7	[more]
AT2G37270.1	7.8e-08	33.58	ribosomal protein 5B	[more]

BLAST of CmaCh09G002830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|952954389\|gb\|ALO21753.1\|	2.5e-77	100.00	ribosomal protein S7 (plastid) [Cucurbita argyrosperma]	[more]
gi\|346578237\|ref\|YP_004841829.1\|	7.4e-77	99.35	ribosomal protein S7 [Cucumis melo subsp. melo]	[more]
gi\|984914471\|gb\|AMC32664.1\|	9.7e-77	99.35	ribosomal protein S7 (chloroplast) [Euphorbia marginata]	[more]
gi\|317046218\|ref\|YP_004072507.1\|	1.3e-76	98.71	ribosomal protein S7 [Corynocarpus laevigata]	[more]
gi\|108802686\|ref\|YP_636344.1\|	2.8e-76	98.71	ribosomal protein S7 (chloroplast) [Eucalyptus globulus subsp. globulus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G002830.1	CmaCh09G002830.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G002830	Melon (DHL92) v3.6.1	cmamedB018
CmaCh09G002830	Melon (DHL92) v3.6.1	cmamedB024
CmaCh09G002830	Melon (DHL92) v3.6.1	cmamedB039
CmaCh09G002830	Melon (DHL92) v3.6.1	cmamedB045
CmaCh09G002830	Silver-seed gourd	carcmaB0001
CmaCh09G002830	Silver-seed gourd	carcmaB0247
CmaCh09G002830	Silver-seed gourd	carcmaB0448
CmaCh09G002830	Silver-seed gourd	carcmaB0555
CmaCh09G002830	Silver-seed gourd	carcmaB0629
CmaCh09G002830	Silver-seed gourd	carcmaB1065
CmaCh09G002830	Cucumber (Chinese Long) v3	cmacucB0015
CmaCh09G002830	Cucumber (Chinese Long) v3	cmacucB0057
CmaCh09G002830	Cucumber (Chinese Long) v3	cmacucB0027
CmaCh09G002830	Cucumber (Chinese Long) v3	cmacucB0041
CmaCh09G002830	Watermelon (97103) v2	cmawmbB014
CmaCh09G002830	Watermelon (97103) v2	cmawmbB026
CmaCh09G002830	Watermelon (97103) v2	cmawmbB035
CmaCh09G002830	Wax gourd	cmawgoB0014
CmaCh09G002830	Wax gourd	cmawgoB0023
CmaCh09G002830	Wax gourd	cmawgoB0035
CmaCh09G002830	Cucurbita maxima (Rimu)	cmacmaB032
CmaCh09G002830	Cucurbita maxima (Rimu)	cmacmaB033
CmaCh09G002830	Cucurbita maxima (Rimu)	cmacmaB042
CmaCh09G002830	Cucurbita maxima (Rimu)	cmacmaB051
CmaCh09G002830	Cucurbita maxima (Rimu)	cmacmaB063
CmaCh09G002830	Cucurbita maxima (Rimu)	cmacmaB067
CmaCh09G002830	Cucurbita maxima (Rimu)	cmacmaB071
CmaCh09G002830	Cucumber (Gy14) v1	cgycmaB0220
CmaCh09G002830	Cucumber (Gy14) v1	cgycmaB0960
CmaCh09G002830	Cucumber (Gy14) v1	cgycmaB1086
CmaCh09G002830	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G002830	Cucurbita moschata (Rifu)	cmacmoB033
CmaCh09G002830	Cucurbita moschata (Rifu)	cmacmoB038
CmaCh09G002830	Cucurbita moschata (Rifu)	cmacmoB047
CmaCh09G002830	Cucurbita moschata (Rifu)	cmacmoB058
CmaCh09G002830	Cucurbita moschata (Rifu)	cmacmoB062
CmaCh09G002830	Cucurbita moschata (Rifu)	cmacmoB065
CmaCh09G002830	Wild cucumber (PI 183967)	cmacpiB011
CmaCh09G002830	Wild cucumber (PI 183967)	cmacpiB020
CmaCh09G002830	Wild cucumber (PI 183967)	cmacpiB034
CmaCh09G002830	Cucumber (Chinese Long) v2	cmacuB011
CmaCh09G002830	Cucumber (Chinese Long) v2	cmacuB020
CmaCh09G002830	Cucumber (Chinese Long) v2	cmacuB034
CmaCh09G002830	Melon (DHL92) v3.5.1	cmameB023
CmaCh09G002830	Melon (DHL92) v3.5.1	cmameB040
CmaCh09G002830	Melon (DHL92) v3.5.1	cmameB048
CmaCh09G002830	Watermelon (Charleston Gray)	cmawcgB021
CmaCh09G002830	Watermelon (Charleston Gray)	cmawcgB029
CmaCh09G002830	Watermelon (97103) v1	cmawmB014
CmaCh09G002830	Watermelon (97103) v1	cmawmB026
CmaCh09G002830	Watermelon (97103) v1	cmawmB034
CmaCh09G002830	Cucurbita pepo (Zucchini)	cmacpeB030
CmaCh09G002830	Cucurbita pepo (Zucchini)	cmacpeB035
CmaCh09G002830	Cucurbita pepo (Zucchini)	cmacpeB042
CmaCh09G002830	Cucurbita pepo (Zucchini)	cmacpeB045
CmaCh09G002830	Cucurbita pepo (Zucchini)	cmacpeB060
CmaCh09G002830	Cucurbita pepo (Zucchini)	cmacpeB067
CmaCh09G002830	Bottle gourd (USVL1VR-Ls)	cmalsiB016
CmaCh09G002830	Bottle gourd (USVL1VR-Ls)	cmalsiB024
CmaCh09G002830	Bottle gourd (USVL1VR-Ls)	cmalsiB032
CmaCh09G002830	Cucumber (Gy14) v2	cgybcmaB147
CmaCh09G002830	Cucumber (Gy14) v2	cgybcmaB465
CmaCh09G002830	Cucumber (Gy14) v2	cgybcmaB699
CmaCh09G002830	Cucumber (Gy14) v2	cgybcmaB889