CmaCh09G001200 (gene) Cucurbita maxima (Rimu)

NameCmaCh09G001200
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr09 : 521365 .. 522156 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCCGATTCTTCTTCTTCGTTAGGCGAGAATCGAGTTTAGTATAATTACTGTCACAAGCTTGAAGAAGGCCGGGTGTTAGCATGAAGCTTTCGTCTTGATTGCTGGGAGCTGTAGTTGAAGTAGATTCAGTTCCTGCAAAATTGTACTCTTTCTGAATTCAGTAGAACAAGAAAAAAACTTCAACAAGTTAGCTATGCTGCGCCTTCTGAAGGATACCCATCAACCATTCATCTTGGTATGCGAGGTTCATGATGGAGCCTTATCTTTGTTGCCTGTCTTTCATTTGCATATTTCCGTTGTCTAGAGATTTTATAGTAAGATAATATATTCTAGAGTTTTTGCTCTGCCTTGTGTTTCCGTTGGTAATACACCAATTAATCCTATAAACTGAACCACAGGATAGAGATCAATACCAATCATAGAGCTTTAACTCGAAAGTGAAATTAGAGGTGGTACTGTGATAAAAGAAATCTCAAACGAGTCTTATTTATCAATATGGTGTCACCTTTATTTCAAGAGCATTCTTCTCACAGGCAGAATTGCCAATCGGCACTGAAAAACTAAGCATACACCATACAGTATTTGCAGCAATACCAACCCCGTTTAAACAGAGAATTTTCTTTTGTTTCAGAAGTGAAGGAAAAGAAAAAAAGAAAAAAACTGAATCTAATTAATTATGAAGCCAAAAATCACATTCTCCAACCAATGATCGGAGTCTTCCCCTATGCAGTAGTTTCCATCTCTTCCATCGCTATAAGCTACATCAGTAGAAGTGTTCATCAGTGA

mRNA sequence

ATGAAGGCCGATTCTTCTTCTTCGTTAGGCGAGAATCGAGTTTATAGAACAAGAAAAAAACTTCAACAAGTTAGCTATGCTGCGCCTTCTGAAGGATACCCATCAACCATTCATCTTGCATACACCATACAGTATTTGCAGCAATACCAACCCCGTTTAAACAGAGAATTTTCTTTTGTTTCAGAAGTGAAGGAAAAGAAAAAAAGAAAAAAACTGAATCTAATTAATTATGAAGCCAAAAATCACATTCTCCAACCAATGATCGGAGTCTTCCCCTATGCAGTAGTTTCCATCTCTTCCATCGCTATAAGCTACATCAGTAGAAGTGTTCATCAGTGA

Coding sequence (CDS)

ATGAAGGCCGATTCTTCTTCTTCGTTAGGCGAGAATCGAGTTTATAGAACAAGAAAAAAACTTCAACAAGTTAGCTATGCTGCGCCTTCTGAAGGATACCCATCAACCATTCATCTTGCATACACCATACAGTATTTGCAGCAATACCAACCCCGTTTAAACAGAGAATTTTCTTTTGTTTCAGAAGTGAAGGAAAAGAAAAAAAGAAAAAAACTGAATCTAATTAATTATGAAGCCAAAAATCACATTCTCCAACCAATGATCGGAGTCTTCCCCTATGCAGTAGTTTCCATCTCTTCCATCGCTATAAGCTACATCAGTAGAAGTGTTCATCAGTGA

Protein sequence

MKADSSSSLGENRVYRTRKKLQQVSYAAPSEGYPSTIHLAYTIQYLQQYQPRLNREFSFVSEVKEKKKRKKLNLINYEAKNHILQPMIGVFPYAVVSISSIAISYISRSVHQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G001200.1CmaCh09G001200.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 60..80
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G001200Cucurbita pepo (Zucchini)cmacpeB036
CmaCh09G001200Cucurbita pepo (Zucchini)cmacpeB030
CmaCh09G001200Cucurbita pepo (Zucchini)cmacpeB043
CmaCh09G001200Cucurbita pepo (Zucchini)cmacpeB045
CmaCh09G001200Cucurbita pepo (Zucchini)cmacpeB060
CmaCh09G001200Cucurbita pepo (Zucchini)cmacpeB065
CmaCh09G001200Bottle gourd (USVL1VR-Ls)cmalsiB013
CmaCh09G001200Bottle gourd (USVL1VR-Ls)cmalsiB024
CmaCh09G001200Bottle gourd (USVL1VR-Ls)cmalsiB032
CmaCh09G001200Cucumber (Gy14) v2cgybcmaB147
CmaCh09G001200Cucumber (Gy14) v2cgybcmaB287
CmaCh09G001200Melon (DHL92) v3.6.1cmamedB024
CmaCh09G001200Melon (DHL92) v3.6.1cmamedB031
CmaCh09G001200Melon (DHL92) v3.6.1cmamedB048
CmaCh09G001200Silver-seed gourdcarcmaB0134
CmaCh09G001200Silver-seed gourdcarcmaB1291
CmaCh09G001200Silver-seed gourdcarcmaB1345
CmaCh09G001200Cucumber (Chinese Long) v3cmacucB0015
CmaCh09G001200Cucumber (Chinese Long) v3cmacucB0019
CmaCh09G001200Cucumber (Chinese Long) v3cmacucB0024
CmaCh09G001200Cucumber (Chinese Long) v3cmacucB0042
CmaCh09G001200Watermelon (97103) v2cmawmbB015
CmaCh09G001200Watermelon (97103) v2cmawmbB026
CmaCh09G001200Watermelon (97103) v2cmawmbB035
CmaCh09G001200Wax gourdcmawgoB0030
CmaCh09G001200Cucurbita maxima (Rimu)cmacmaB034
CmaCh09G001200Cucurbita maxima (Rimu)cmacmaB051
CmaCh09G001200Cucurbita maxima (Rimu)cmacmaB060
CmaCh09G001200Cucurbita maxima (Rimu)cmacmaB061
CmaCh09G001200Cucurbita maxima (Rimu)cmacmaB070
CmaCh09G001200Cucurbita maxima (Rimu)cmacmaB067
CmaCh09G001200Cucumber (Gy14) v1cgycmaB0920
CmaCh09G001200Cucurbita moschata (Rifu)cmacmoB027
CmaCh09G001200Cucurbita moschata (Rifu)cmacmoB032
CmaCh09G001200Cucurbita moschata (Rifu)cmacmoB047
CmaCh09G001200Cucurbita moschata (Rifu)cmacmoB057
CmaCh09G001200Cucurbita moschata (Rifu)cmacmoB064
CmaCh09G001200Wild cucumber (PI 183967)cmacpiB011
CmaCh09G001200Wild cucumber (PI 183967)cmacpiB017
CmaCh09G001200Cucumber (Chinese Long) v2cmacuB011
CmaCh09G001200Cucumber (Chinese Long) v2cmacuB017
CmaCh09G001200Melon (DHL92) v3.5.1cmameB023
CmaCh09G001200Melon (DHL92) v3.5.1cmameB032
CmaCh09G001200Watermelon (Charleston Gray)cmawcgB021
CmaCh09G001200Watermelon (Charleston Gray)cmawcgB029
CmaCh09G001200Watermelon (97103) v1cmawmB014
CmaCh09G001200Watermelon (97103) v1cmawmB026