CmaCh09G000200 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G000200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	AT hook motif DNA-binding family protein
Location	Cma_Chr09 : 119736 .. 120659 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAATGGCGGGGTACAGCGAAGAAGGAGGAGCGGGTTCACGCTACGTGCAACACCACCATCATCATCATCAACTTCTGAATCCGGAACTGCATCTGGACACGCCCTCCTCCTCCTCTATTCCATTTCCTCATCCTCATCTATTCAACCATTCCAATCACTCCGATGATGGTGATGATAATAACGATACTAATAATACTACTAATCCCTCTCAAAACCAACACGCCTCCCTTCGCCGCCCTCGTGGCCGTCCTCCTGGATCCAAAAACAAGCCCAAACCTCCCATTATCCTCACTCGCGATAGTCCCAACGTCCTCGGCTCTCATGTCCTCGAGGTCTCCGCCTCCGCTGATATCGTCGATAGTCTCTCCAATTACGCCCGCCGCAGAGGGAGAGGACTCAGCATCCTCTGCGGCACTGGTACTGTCGCCAACGTCACGCTCCGTCAGCCATCTGCCTCTCCTACGGCTAGCGTCATCACTCTTCATGGCAGGTTCGAGATTCTCTCCCTCACGGGCACTGTGCTTCCCCCGCCAGCTCCGCCGCAGGCAGGTGGACTGTCTATATTCCTAGCCGGGGCACAAGGGCAGGTGGTTGGAGGGACGGTGGTGGGGCCCTTGGTGGCTTCGGGGCCGGTGATTTTGATGGCGGCGTCATTCTCCAACGCTGTGTTTGAAAGGTTGCCTCTGGAAGAAGAGGAGGAAGGGGGAGTGCAAGTTCAACCGACGGCGTCGCAGTCGTCGGGAGTGACCGGAGGCGGACAGATGGGGGAGGGCGGTGGGAATGCAAACGAGGGGAGCGGCGGCGGAGTTGGGTTCCTGGGCAACAGTACAATAGCGGGATATCCTCCGTTTGCAGGGGATTTGTTTGGTTGGGGAAGTGGAAGTGGAAGTGGGAATGCCACAAAGCCTCGTCAGTTCTAA

mRNA sequence

ATGAGAATGGCGGGGTACAGCGAAGAAGGAGGAGCGGGTTCACGCTACGTGCAACACCACCATCATCATCATCAACTTCTGAATCCGGAACTGCATCTGGACACGCCCTCCTCCTCCTCTATTCCATTTCCTCATCCTCATCTATTCAACCATTCCAATCACTCCGATGATGGTGATGATAATAACGATACTAATAATACTACTAATCCCTCTCAAAACCAACACGCCTCCCTTCGCCGCCCTCGTGGCCGTCCTCCTGGATCCAAAAACAAGCCCAAACCTCCCATTATCCTCACTCGCGATAGTCCCAACGTCCTCGGCTCTCATGTCCTCGAGGTCTCCGCCTCCGCTGATATCGTCGATAGTCTCTCCAATTACGCCCGCCGCAGAGGGAGAGGACTCAGCATCCTCTGCGGCACTGGTACTGTCGCCAACGTCACGCTCCGTCAGCCATCTGCCTCTCCTACGGCTAGCGTCATCACTCTTCATGGCAGGTTCGAGATTCTCTCCCTCACGGGCACTGTGCTTCCCCCGCCAGCTCCGCCGCAGGCAGGTGGACTGTCTATATTCCTAGCCGGGGCACAAGGGCAGGTGGTTGGAGGGACGGTGGTGGGGCCCTTGGTGGCTTCGGGGCCGGTGATTTTGATGGCGGCGTCATTCTCCAACGCTGTGTTTGAAAGGTTGCCTCTGGAAGAAGAGGAGGAAGGGGGAGTGCAAGTTCAACCGACGGCGTCGCAGTCGTCGGGAGTGACCGGAGGCGGACAGATGGGGGAGGGCGGTGGGAATGCAAACGAGGGGAGCGGCGGCGGAGTTGGGTTCCTGGGCAACAGTACAATAGCGGGATATCCTCCGTTTGCAGGGGATTTGTTTGGTTGGGGAAGTGGAAGTGGAAGTGGGAATGCCACAAAGCCTCGTCAGTTCTAA

Coding sequence (CDS)

ATGAGAATGGCGGGGTACAGCGAAGAAGGAGGAGCGGGTTCACGCTACGTGCAACACCACCATCATCATCATCAACTTCTGAATCCGGAACTGCATCTGGACACGCCCTCCTCCTCCTCTATTCCATTTCCTCATCCTCATCTATTCAACCATTCCAATCACTCCGATGATGGTGATGATAATAACGATACTAATAATACTACTAATCCCTCTCAAAACCAACACGCCTCCCTTCGCCGCCCTCGTGGCCGTCCTCCTGGATCCAAAAACAAGCCCAAACCTCCCATTATCCTCACTCGCGATAGTCCCAACGTCCTCGGCTCTCATGTCCTCGAGGTCTCCGCCTCCGCTGATATCGTCGATAGTCTCTCCAATTACGCCCGCCGCAGAGGGAGAGGACTCAGCATCCTCTGCGGCACTGGTACTGTCGCCAACGTCACGCTCCGTCAGCCATCTGCCTCTCCTACGGCTAGCGTCATCACTCTTCATGGCAGGTTCGAGATTCTCTCCCTCACGGGCACTGTGCTTCCCCCGCCAGCTCCGCCGCAGGCAGGTGGACTGTCTATATTCCTAGCCGGGGCACAAGGGCAGGTGGTTGGAGGGACGGTGGTGGGGCCCTTGGTGGCTTCGGGGCCGGTGATTTTGATGGCGGCGTCATTCTCCAACGCTGTGTTTGAAAGGTTGCCTCTGGAAGAAGAGGAGGAAGGGGGAGTGCAAGTTCAACCGACGGCGTCGCAGTCGTCGGGAGTGACCGGAGGCGGACAGATGGGGGAGGGCGGTGGGAATGCAAACGAGGGGAGCGGCGGCGGAGTTGGGTTCCTGGGCAACAGTACAATAGCGGGATATCCTCCGTTTGCAGGGGATTTGTTTGGTTGGGGAAGTGGAAGTGGAAGTGGGAATGCCACAAAGCCTCGTCAGTTCTAA

Protein sequence

MRMAGYSEEGGAGSRYVQHHHHHHQLLNPELHLDTPSSSSIPFPHPHLFNHSNHSDDGDDNNDTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRQPSASPTASVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEEEEGGVQVQPTASQSSGVTGGGQMGEGGGNANEGSGGGVGFLGNSTIAGYPPFAGDLFGWGSGSGSGNATKPRQF

Homology

[Close]

BLAST of CmaCh09G000200 vs. Swiss-Prot
Match: AHL27_ARATH (AT-hook motif nuclear-localized protein 27 OS=Arabidopsis thaliana GN=AHL27 PE=1 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 1.3e-69
Identity = 174/331 (52.57%), Postives = 206/331 (62.24%), Query Frame = 1


Query: 3   MAGYSEEGGAGSRYVQHHHHHHQLLNPELH---LDTPSSSSIPFPHPHLFN-HSNHSDDG 62
           M G  E+GG  SRY       H L  PE+H   L      ++   H H    H       
Sbjct: 1   MEGGYEQGGGASRYF------HNLFRPEIHHQQLQPQGGINLIDQHHHQHQQHQQQQQPS 60

Query: 63  DDNNDTNNT-----------TNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLG 122
           DD+ +++++           ++P+ +  A  +RPRGRPPGSKNK KPPII+TRDSPN L 
Sbjct: 61  DDSRESDHSNKDHHQQGRPDSDPNTSSSAPGKRPRGRPPGSKNKAKPPIIVTRDSPNALR 120

Query: 123 SHVLEVSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRQP-------SASPTASVI 182
           SHVLEVS  ADIV+S+S YARRRGRG+S+L G GTV+NVTLRQP         S    V+
Sbjct: 121 SHVLEVSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGVV 180

Query: 183 TLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASF 242
           TLHGRFEILSLTGTVLPPPAPP AGGLSIFLAG QGQVVGG+VV PL+AS PVILMAASF
Sbjct: 181 TLHGRFEILSLTGTVLPPPAPPGAGGLSIFLAGGQGQVVGGSVVAPLIASAPVILMAASF 240

Query: 243 SNAVFERLPLEEEEEGG-------------VQVQPTASQSSGVTGGGQMGEGGGNANEGS 299
           SNAVFERLP+EEEEE G             +Q  P+AS  SGVTG GQ+G        G+
Sbjct: 241 SNAVFERLPIEEEEEEGGGGGGGGGGGPPQMQQAPSASPPSGVTGQGQLG--------GN 300

[Close]

BLAST of CmaCh09G000200 vs. Swiss-Prot
Match: AHL29_ARATH (AT-hook motif nuclear-localized protein 29 OS=Arabidopsis thaliana GN=AHL29 PE=1 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 8.6e-69
Identity = 172/316 (54.43%), Postives = 204/316 (64.56%), Query Frame = 1


Query: 5   GYSEEGGAGSRYVQHHHHHHQLLNPELHLDT---PSSSSIPFPHPHLFNHSNHSDDGDDN 64
           GY + GGA SRY       H L  PELH      P    +P P P       +SDD  D+
Sbjct: 4   GYDQSGGA-SRYF------HNLFRPELHHQLQPQPQLHPLPQPQPQPQPQQQNSDDESDS 63

Query: 65  NDTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVD 124
           N    +   +       +RPRGRPPGSKNKPKPP+I+TRDSPNVL SHVLEVS+ ADIV+
Sbjct: 64  NKDPGSDPVTSGSTG--KRPRGRPPGSKNKPKPPVIVTRDSPNVLRSHVLEVSSGADIVE 123

Query: 125 SLSNYARRRGRGLSILCGTGTVANVTLRQPSASP-------TASVITLHGRFEILSLTGT 184
           S++ YARRRGRG+SIL G GTVANV+LRQP+ +        T  V+ LHGRFEILSLTGT
Sbjct: 124 SVTTYARRRGRGVSILSGNGTVANVSLRQPATTAAHGANGGTGGVVALHGRFEILSLTGT 183

Query: 185 VLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEE- 244
           VLPPPAPP +GGLSIFL+G QGQV+GG VV PLVASGPVILMAASFSNA FERLPLE+E 
Sbjct: 184 VLPPPAPPGSGGLSIFLSGVQGQVIGGNVVAPLVASGPVILMAASFSNATFERLPLEDEG 243

Query: 245 EEGGVQVQPTASQSSGVTGGGQMGEGGG---------NANEGSGGGVGFLGNSTIAGYPP 299
            EGG               GG++GEGGG         +++  SG G G L    ++GY  
Sbjct: 244 GEGG--------------EGGEVGEGGGGEGGPPPATSSSPPSGAGQGQL-RGNMSGYDQ 295

[Close]

BLAST of CmaCh09G000200 vs. Swiss-Prot
Match: AHL25_ARATH (AT-hook motif nuclear-localized protein 25 OS=Arabidopsis thaliana GN=AHL25 PE=1 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 5.8e-65
Identity = 154/292 (52.74%), Postives = 191/292 (65.41%), Query Frame = 1


Query: 24  HQLLNPELHLDTPSSSSIPFPHPHLFNHSNHSDDGDDNNDTNN--TTNPSQNQHASLRRP 83
           H LL  ELHL  P  S  P    ++  + + +D+           T++ + +  +S RRP
Sbjct: 6   HPLLGQELHLQRPEDSRTPPDQNNMELNRSEADEAKAETTPTGGATSSATASGSSSGRRP 65

Query: 84  RGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGLSILCGTG 143
           RGRP GSKNKPKPP I+TRDSPNVL SHVLEV++ +DI +++S YA RRG G+ I+ GTG
Sbjct: 66  RGRPAGSKNKPKPPTIITRDSPNVLRSHVLEVTSGSDISEAVSTYATRRGCGVCIISGTG 125

Query: 144 TVANVTLRQPSASPTASVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGG 203
            V NVT+RQP+A     VITLHGRF+ILSLTGT LPPPAPP AGGL+++LAG QGQVVGG
Sbjct: 126 AVTNVTIRQPAAPAGGGVITLHGRFDILSLTGTALPPPAPPGAGGLTVYLAGGQGQVVGG 185

Query: 204 TVVGPLVASGPVILMAASFSNAVFERLPLEEEE------EGGVQVQPTASQSSGVTGGGQ 263
            V G L+ASGPV+LMAASF+NAV++RLP+EEEE       G  Q QP ASQSS VTG G 
Sbjct: 186 NVAGSLIASGPVVLMAASFANAVYDRLPIEEEETPPPRTTGVQQQQPEASQSSEVTGSGA 245

Query: 264 MGEGGGNANEGSGGGVGFLG-NSTIAGYPPFAGDLFGW--GSGSGSGNATKP 305
                       GGGV F      +  +    GD++G   GSG G G AT+P
Sbjct: 246 QACESNLQGGNGGGGVAFYNLGMNMNNFQFSGGDIYGMSGGSGGGGGGATRP 297

[Close]

BLAST of CmaCh09G000200 vs. Swiss-Prot
Match: AHL19_ARATH (AT-hook motif nuclear-localized protein 19 OS=Arabidopsis thaliana GN=AHL19 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.1e-55
Identity = 143/289 (49.48%), Postives = 187/289 (64.71%), Query Frame = 1


Query: 25  QLLNPELHLDTPSSSSIPFPHPHLFNHSNHSDDGDDNNDTNNTTNPSQNQH--------A 84
           QL  P+LH+    S ++     H  N+ +H  + D+NN+ ++  N S + H        A
Sbjct: 24  QLKKPDLHI----SMNMAMDSGH--NNHHHHQEVDNNNNDDDRDNLSGDDHEPREGAVEA 83

Query: 85  SLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGLSI 144
             RRPRGRP GSKNKPKPPI +TRDSPN L SHV+E+++  D++++L+ +ARRR RG+ I
Sbjct: 84  PTRRPRGRPAGSKNKPKPPIFVTRDSPNALKSHVMEIASGTDVIETLATFARRRQRGICI 143

Query: 145 LCGTGTVANVTLRQPSASPT------ASVITLHGRFEILSLTGTVLPPPAPPQAGGLSIF 204
           L G GTVANVTLRQPS +        A+V+ L GRFEILSLTG+ LP PAPP + GL+I+
Sbjct: 144 LSGNGTVANVTLRQPSTAAVAAAPGGAAVLALQGRFEILSLTGSFLPGPAPPGSTGLTIY 203

Query: 205 LAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEEEEGGVQVQPTASQSSGV 264
           LAG QGQVVGG+VVGPL+A+GPV+L+AA+FSNA +ERLPLEEEE      +      SG 
Sbjct: 204 LAGGQGQVVGGSVVGPLMAAGPVMLIAATFSNATYERLPLEEEE----AAERGGGGGSGG 263

Query: 265 TGGGQMGEGGGNANEGSGGGVGFLGNSTIAGYPPFAGDLFGWGSGSGSG 300
              GQ+G GG   + G+GGG    GN  +  Y    G+L   G   G G
Sbjct: 264 VVPGQLGGGGSPLSSGAGGGD---GNQGLPVY-NMPGNLVSNGGSGGGG 298

[Close]

BLAST of CmaCh09G000200 vs. Swiss-Prot
Match: AHL24_ARATH (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana GN=AHL24 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 9.6e-52
Identity = 117/214 (54.67%), Postives = 150/214 (70.09%), Query Frame = 1


Query: 50  NHSNHSDDGDDNNDTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSH 109
           N  +   D D +  +      S   H   RRPRGRP GSKNKPKPPII+TRDS N L +H
Sbjct: 76  NSGSEGKDIDIHGGSGEGGGGSGGDHQMTRRPRGRPAGSKNKPKPPIIITRDSANALRTH 135

Query: 110 VLEVSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRQPSASPT-ASVITLHGRFEI 169
           V+E+    D+V+S++ +ARRR RG+ ++ GTG V NVT+RQP + P+  SV++LHGRFEI
Sbjct: 136 VMEIGDGCDLVESVATFARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEI 195

Query: 170 LSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERL 229
           LSL+G+ LPPPAPP A GLS++LAG QGQVVGG+VVGPL+ +GPV++MAASFSNA +ERL
Sbjct: 196 LSLSGSFLPPPAPPTATGLSVYLAGGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERL 255

Query: 230 PLEEEEEGGVQVQPTASQSSGVTGGGQMGEGGGN 263
           PLEE+E             + V GGG    GGG+
Sbjct: 256 PLEEDE-----------MQTPVHGGG----GGGS 274

[Close]

BLAST of CmaCh09G000200 vs. TrEMBL
Match: A0A067KKW8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08028 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 6.2e-82
Identity = 193/307 (62.87%), Postives = 219/307 (71.34%), Query Frame = 1


Query: 3   MAGYSEEGGAGSRYVQHHHHHHQLLNPELHLDTPSSSSIPFPHPHLFNHSNHSDDGDDNN 62
           M+GY +   AGSRYV      HQLL PELHL  PS      P     +  N S    D+ 
Sbjct: 1   MSGYEQT--AGSRYV------HQLLRPELHLQRPSLPVQLSPD----SKDNTSPQSKDHK 60

Query: 63  DTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVDS 122
            T +T   + +   S RRPRGRPPGSKNKPKPPII+TRDSPN L SHVLEVS  +DIV++
Sbjct: 61  -TTDTDTAATSSGGSYRRPRGRPPGSKNKPKPPIIVTRDSPNALRSHVLEVSTGSDIVET 120

Query: 123 LSNYARRRGRGLSILCGTGTVANVTLRQPSASPTASVITLHGRFEILSLTGTVLPPPAPP 182
           +SNYAR+RGRG+ +L G GTVANVTLRQP ASP  SV+TL GRFEILSL+GTVLPPPAPP
Sbjct: 121 VSNYARKRGRGVCVLSGNGTVANVTLRQP-ASPAGSVVTLQGRFEILSLSGTVLPPPAPP 180

Query: 183 QAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEEEEGGVQVQP 242
            AGGLSIFL+G QGQVVGG+VVGPL+ASGPV+LMAASF+NAVFERLPL +EEEG VQVQ 
Sbjct: 181 GAGGLSIFLSGGQGQVVGGSVVGPLLASGPVVLMAASFANAVFERLPL-DEEEGNVQVQS 240

Query: 243 TASQSSGVTGGGQMGE-----GGGNANEGSGGGVGFLGNSTIAGYPPFAGDLFGWGSGSG 302
           TASQSSGVTG G  G      GGG    G GGG  F       G  PF+GDLFGWG    
Sbjct: 241 TASQSSGVTGSGGAGHLADGGGGGRGGGGGGGGGAFFNVGGNVGNYPFSGDLFGWG---- 287

Query: 303 SGNATKP 305
            G+AT+P
Sbjct: 301 -GSATRP 287

[Close]

BLAST of CmaCh09G000200 vs. TrEMBL
Match: A0A061FMX7_THECC (AT-hook DNA-binding family protein, putative OS=Theobroma cacao GN=TCM_034810 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 6.2e-82
Identity = 189/296 (63.85%), Postives = 215/296 (72.64%), Query Frame = 1


Query: 3   MAGYSEEGGAGSRYVQHHHHHHQLLNPELHLDTPSSSSIPFPHPHLFNHSNHSDDGDDNN 62
           MAGY E  G GSRY Q      Q   PELHL  PS +          + S  S D D NN
Sbjct: 62  MAGY-EAAGPGSRYGQ------QPFRPELHLQMPSLTPPS-------DDSRDSQDNDPNN 121

Query: 63  DTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVDS 122
              +    + +     RRPRGRP GSKNKPKPPII+TRDSPN L SHVLE+S+ ADIVDS
Sbjct: 122 PDLSDAAAATSSGGPTRRPRGRPAGSKNKPKPPIIVTRDSPNALRSHVLEISSGADIVDS 181

Query: 123 LSNYARRRGRGLSILCGTGTVANVTLRQPSASPTASVITLHGRFEILSLTGTVLPPPAPP 182
           LSNYARRRGRG+ +L G+GTVANV+LRQP ASP ASV+TLHGRFEILSL G VLPPPAPP
Sbjct: 182 LSNYARRRGRGICVLSGSGTVANVSLRQP-ASPPASVLTLHGRFEILSLCGKVLPPPAPP 241

Query: 183 QAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEEEEGGVQVQP 242
             GGLSIFL+G QGQVVGG VVGPLVASGPV+LMAASF+NAVFERLP +EEEEG VQVQP
Sbjct: 242 GVGGLSIFLSGGQGQVVGGRVVGPLVASGPVVLMAASFANAVFERLPPDEEEEGTVQVQP 301

Query: 243 TASQSSGVTGGGQMGEGGGNANEGSGGGVG--FLGNSTIAGYPPFAGDLFGWGSGS 297
           T SQSSGVTG GQ+ +GGG ++  +    G  F+   +   Y PF+GDLFGWGSG+
Sbjct: 302 TGSQSSGVTGSGQLPDGGGTSSAAASATAGSLFIMGGSGPNY-PFSGDLFGWGSGT 341

[Close]

BLAST of CmaCh09G000200 vs. TrEMBL
Match: F6I0P7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g04110 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 4.0e-81
Identity = 192/308 (62.34%), Postives = 217/308 (70.45%), Query Frame = 1


Query: 3   MAGYSEEGGAGSRYVQHHHHHHQLLNPELHLD-TPSSSSIPFPHPHLFNHSNHSDDGDDN 62
           MAG   E GAGSRY+      HQL  PEL L+ TP         PH     N S D  +N
Sbjct: 1   MAGM--EQGAGSRYI------HQLFRPELQLERTPQQ-------PHQPPQLNDSGDSPEN 60

Query: 63  NDTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVD 122
            D  +          S RRPRGRPPGSKNK KPPII+TRDSPN L SHVLE+SA ADIV+
Sbjct: 61  EDRTDPDGSPGAATTSSRRPRGRPPGSKNKAKPPIIITRDSPNALRSHVLEISAGADIVE 120

Query: 123 SLSNYARRRGRGLSILCGTGTVANVTLRQPSASPTASVITLHGRFEILSLTGTVLPPPAP 182
           S+SNYARRRGRG+ IL G G V +VTLRQP+A P+ SV+TLHGRFEILSLTGT LPPPAP
Sbjct: 121 SVSNYARRRGRGVCILSGGGAVTDVTLRQPAA-PSGSVVTLHGRFEILSLTGTALPPPAP 180

Query: 183 PQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEEEEGGVQVQ 242
           P AGGL+I+L G QGQVVGG VVGPLVASGPV+LMAASF+NAV++RLPLEEEEE  VQVQ
Sbjct: 181 PGAGGLTIYLGGGQGQVVGGRVVGPLVASGPVLLMAASFANAVYDRLPLEEEEESPVQVQ 240

Query: 243 PTASQSSGVT-GGGQMGEGGG----NANEGSGGGVGFLGNSTIAGYPPFAGDLFGWGSGS 302
           PTASQSSGVT GGGQ+G+GG      A  G+G GV F       G  PF GD+FGW    
Sbjct: 241 PTASQSSGVTGGGGQLGDGGNGSTTTAGGGAGAGVPFYNLGPNMGNYPFPGDVFGW---- 287

Query: 303 GSGNATKP 305
            +G AT+P
Sbjct: 301 -NGGATRP 287

[Close]

BLAST of CmaCh09G000200 vs. TrEMBL
Match: B9H5W8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27850g PE=4 SV=2)

HSP 1 Score: 308.9 bits (790), Expect = 6.8e-81
Identity = 192/317 (60.57%), Postives = 228/317 (71.92%), Query Frame = 1


Query: 3   MAGYSEEGGAGSRYVQHHHHHHQLLNPELHL----------DTPSSSSIPFPHPHLFNHS 62
           MAG+    G  SRYV H  +H+ LL PELHL          D+  +++ P P  H    +
Sbjct: 1   MAGFE---GNNSRYV-HGQNHNNLLRPELHLIQRPSSIPSSDSRDNNNTPSPPDHANQTA 60

Query: 63  NHSDDGDDNNDTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLE 122
           +H  D      +   TNP+       RRPRGRP GSKNKPKPPII+TRDSPN L SHV+E
Sbjct: 61  HHHPDSSATTSSGGGTNPN-------RRPRGRPAGSKNKPKPPIIVTRDSPNALRSHVIE 120

Query: 123 VSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRQPSASPTASVITLHGRFEILSLT 182
           +S  ADIV+S+S YAR+RGRG+ +L G+GTVANVTLRQP ASP  SV+TLHGRFEILSL+
Sbjct: 121 ISNGADIVESVSTYARKRGRGVCVLSGSGTVANVTLRQP-ASPAGSVLTLHGRFEILSLS 180

Query: 183 GTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEE 242
           GTVLPPPAPP AGGLSIFL+G QGQVVGG VVGPL+A+GPV+LMAASF+NAVFERLPL++
Sbjct: 181 GTVLPPPAPPGAGGLSIFLSGGQGQVVGGNVVGPLMAAGPVVLMAASFANAVFERLPLDD 240

Query: 243 EEE-GGVQVQPTASQSSGVTG-GGQMGEGGGNANEGSGGGVGF--LGNSTIAGYPPFAGD 302
           +EE G VQVQPTASQSSGVTG GGQMG+GGG +  G G G GF  +      G  PF+GD
Sbjct: 241 QEEAGAVQVQPTASQSSGVTGSGGQMGDGGGGSGTG-GAGSGFFNMAGGAHHGNYPFSGD 299

Query: 303 LFG-WGSGSGSGNATKP 305
           LFG WG     G+A +P
Sbjct: 301 LFGPWG-----GSAARP 299

[Close]

BLAST of CmaCh09G000200 vs. TrEMBL
Match: B9R8U1_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1602220 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 8.9e-81
Identity = 194/310 (62.58%), Postives = 223/310 (71.94%), Query Frame = 1


Query: 3   MAGYSEEG---GAGSRYVQHHHHHHQLLNPELHLDTPSSSSIPFPHPHLFNHSNHSDDGD 62
           MAGY+ E    G GSRYV      HQLL PELHL  PS  S P         +N S    
Sbjct: 1   MAGYNNEQSATGTGSRYV------HQLLRPELHLQRPSFPSQPSSDS---KDNNISPQSK 60

Query: 63  DNNDTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADI 122
           D+N  +++   +     S RRPRGRP GSKNKPKPPII+TRDSPN L SHVLEVS  +DI
Sbjct: 61  DHNKFSDSEAAAATSSGSNRRPRGRPAGSKNKPKPPIIVTRDSPNALRSHVLEVSTGSDI 120

Query: 123 VDSLSNYARRRGRGLSILCGTGTVANVTLRQPSASPTASVITLHGRFEILSLTGTVLPPP 182
           ++S+S YAR+RGRG+ +L G GTVANVTLRQP ASP  SV+TLHGRFEILSL+GTVLPPP
Sbjct: 121 MESVSIYARKRGRGVCVLSGNGTVANVTLRQP-ASPAGSVVTLHGRFEILSLSGTVLPPP 180

Query: 183 APPQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEEEEGGVQ 242
           APP AGGLSIFL+G QGQVVGG+VVGPL+ASGPV+LMAASF+NAVFERLPL +EE+G V 
Sbjct: 181 APPGAGGLSIFLSGGQGQVVGGSVVGPLMASGPVVLMAASFANAVFERLPL-DEEDGTVP 240

Query: 243 VQPTASQSSGVTGG----GQMGEGGGNANEGSGGGVG-FLGNSTIAGYPPFAGDLFGWGS 302
           VQ TASQSSGVTGG    GQ+G+GGG      GGG G F     +A Y PF+GDLFGWG 
Sbjct: 241 VQSTASQSSGVTGGGGGAGQLGDGGG------GGGAGLFNMGGNVANY-PFSGDLFGWGV 287

Query: 303 GSGSGNATKP 305
                NA +P
Sbjct: 301 -----NAARP 287

[Close]

BLAST of CmaCh09G000200 vs. TAIR10
Match: AT1G20900.1 (AT1G20900.1 Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 264.6 bits (675), Expect = 7.5e-71
Identity = 174/331 (52.57%), Postives = 206/331 (62.24%), Query Frame = 1


Query: 3   MAGYSEEGGAGSRYVQHHHHHHQLLNPELH---LDTPSSSSIPFPHPHLFN-HSNHSDDG 62
           M G  E+GG  SRY       H L  PE+H   L      ++   H H    H       
Sbjct: 1   MEGGYEQGGGASRYF------HNLFRPEIHHQQLQPQGGINLIDQHHHQHQQHQQQQQPS 60

Query: 63  DDNNDTNNT-----------TNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLG 122
           DD+ +++++           ++P+ +  A  +RPRGRPPGSKNK KPPII+TRDSPN L 
Sbjct: 61  DDSRESDHSNKDHHQQGRPDSDPNTSSSAPGKRPRGRPPGSKNKAKPPIIVTRDSPNALR 120

Query: 123 SHVLEVSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRQP-------SASPTASVI 182
           SHVLEVS  ADIV+S+S YARRRGRG+S+L G GTV+NVTLRQP         S    V+
Sbjct: 121 SHVLEVSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGVV 180

Query: 183 TLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASF 242
           TLHGRFEILSLTGTVLPPPAPP AGGLSIFLAG QGQVVGG+VV PL+AS PVILMAASF
Sbjct: 181 TLHGRFEILSLTGTVLPPPAPPGAGGLSIFLAGGQGQVVGGSVVAPLIASAPVILMAASF 240

Query: 243 SNAVFERLPLEEEEEGG-------------VQVQPTASQSSGVTGGGQMGEGGGNANEGS 299
           SNAVFERLP+EEEEE G             +Q  P+AS  SGVTG GQ+G        G+
Sbjct: 241 SNAVFERLPIEEEEEEGGGGGGGGGGGPPQMQQAPSASPPSGVTGQGQLG--------GN 300

[Close]

BLAST of CmaCh09G000200 vs. TAIR10
Match: AT1G76500.1 (AT1G76500.1 Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 261.9 bits (668), Expect = 4.9e-70
Identity = 172/316 (54.43%), Postives = 204/316 (64.56%), Query Frame = 1


Query: 5   GYSEEGGAGSRYVQHHHHHHQLLNPELHLDT---PSSSSIPFPHPHLFNHSNHSDDGDDN 64
           GY + GGA SRY       H L  PELH      P    +P P P       +SDD  D+
Sbjct: 4   GYDQSGGA-SRYF------HNLFRPELHHQLQPQPQLHPLPQPQPQPQPQQQNSDDESDS 63

Query: 65  NDTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVD 124
           N    +   +       +RPRGRPPGSKNKPKPP+I+TRDSPNVL SHVLEVS+ ADIV+
Sbjct: 64  NKDPGSDPVTSGSTG--KRPRGRPPGSKNKPKPPVIVTRDSPNVLRSHVLEVSSGADIVE 123

Query: 125 SLSNYARRRGRGLSILCGTGTVANVTLRQPSASP-------TASVITLHGRFEILSLTGT 184
           S++ YARRRGRG+SIL G GTVANV+LRQP+ +        T  V+ LHGRFEILSLTGT
Sbjct: 124 SVTTYARRRGRGVSILSGNGTVANVSLRQPATTAAHGANGGTGGVVALHGRFEILSLTGT 183

Query: 185 VLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEE- 244
           VLPPPAPP +GGLSIFL+G QGQV+GG VV PLVASGPVILMAASFSNA FERLPLE+E 
Sbjct: 184 VLPPPAPPGSGGLSIFLSGVQGQVIGGNVVAPLVASGPVILMAASFSNATFERLPLEDEG 243

Query: 245 EEGGVQVQPTASQSSGVTGGGQMGEGGG---------NANEGSGGGVGFLGNSTIAGYPP 299
            EGG               GG++GEGGG         +++  SG G G L    ++GY  
Sbjct: 244 GEGG--------------EGGEVGEGGGGEGGPPPATSSSPPSGAGQGQL-RGNMSGYDQ 295

[Close]

BLAST of CmaCh09G000200 vs. TAIR10
Match: AT4G35390.1 (AT4G35390.1 AT-hook protein of GA feedback 1)

HSP 1 Score: 249.2 bits (635), Expect = 3.3e-66
Identity = 154/292 (52.74%), Postives = 191/292 (65.41%), Query Frame = 1


Query: 24  HQLLNPELHLDTPSSSSIPFPHPHLFNHSNHSDDGDDNNDTNN--TTNPSQNQHASLRRP 83
           H LL  ELHL  P  S  P    ++  + + +D+           T++ + +  +S RRP
Sbjct: 6   HPLLGQELHLQRPEDSRTPPDQNNMELNRSEADEAKAETTPTGGATSSATASGSSSGRRP 65

Query: 84  RGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGLSILCGTG 143
           RGRP GSKNKPKPP I+TRDSPNVL SHVLEV++ +DI +++S YA RRG G+ I+ GTG
Sbjct: 66  RGRPAGSKNKPKPPTIITRDSPNVLRSHVLEVTSGSDISEAVSTYATRRGCGVCIISGTG 125

Query: 144 TVANVTLRQPSASPTASVITLHGRFEILSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGG 203
            V NVT+RQP+A     VITLHGRF+ILSLTGT LPPPAPP AGGL+++LAG QGQVVGG
Sbjct: 126 AVTNVTIRQPAAPAGGGVITLHGRFDILSLTGTALPPPAPPGAGGLTVYLAGGQGQVVGG 185

Query: 204 TVVGPLVASGPVILMAASFSNAVFERLPLEEEE------EGGVQVQPTASQSSGVTGGGQ 263
            V G L+ASGPV+LMAASF+NAV++RLP+EEEE       G  Q QP ASQSS VTG G 
Sbjct: 186 NVAGSLIASGPVVLMAASFANAVYDRLPIEEEETPPPRTTGVQQQQPEASQSSEVTGSGA 245

Query: 264 MGEGGGNANEGSGGGVGFLG-NSTIAGYPPFAGDLFGW--GSGSGSGNATKP 305
                       GGGV F      +  +    GD++G   GSG G G AT+P
Sbjct: 246 QACESNLQGGNGGGGVAFYNLGMNMNNFQFSGGDIYGMSGGSGGGGGGATRP 297

[Close]

BLAST of CmaCh09G000200 vs. TAIR10
Match: AT3G04570.1 (AT3G04570.1 AT-hook motif nuclear-localized protein 19)

HSP 1 Score: 218.4 bits (555), Expect = 6.2e-57
Identity = 143/289 (49.48%), Postives = 187/289 (64.71%), Query Frame = 1


Query: 25  QLLNPELHLDTPSSSSIPFPHPHLFNHSNHSDDGDDNNDTNNTTNPSQNQH--------A 84
           QL  P+LH+    S ++     H  N+ +H  + D+NN+ ++  N S + H        A
Sbjct: 24  QLKKPDLHI----SMNMAMDSGH--NNHHHHQEVDNNNNDDDRDNLSGDDHEPREGAVEA 83

Query: 85  SLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVDSLSNYARRRGRGLSI 144
             RRPRGRP GSKNKPKPPI +TRDSPN L SHV+E+++  D++++L+ +ARRR RG+ I
Sbjct: 84  PTRRPRGRPAGSKNKPKPPIFVTRDSPNALKSHVMEIASGTDVIETLATFARRRQRGICI 143

Query: 145 LCGTGTVANVTLRQPSASPT------ASVITLHGRFEILSLTGTVLPPPAPPQAGGLSIF 204
           L G GTVANVTLRQPS +        A+V+ L GRFEILSLTG+ LP PAPP + GL+I+
Sbjct: 144 LSGNGTVANVTLRQPSTAAVAAAPGGAAVLALQGRFEILSLTGSFLPGPAPPGSTGLTIY 203

Query: 205 LAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEEEEGGVQVQPTASQSSGV 264
           LAG QGQVVGG+VVGPL+A+GPV+L+AA+FSNA +ERLPLEEEE      +      SG 
Sbjct: 204 LAGGQGQVVGGSVVGPLMAAGPVMLIAATFSNATYERLPLEEEE----AAERGGGGGSGG 263

Query: 265 TGGGQMGEGGGNANEGSGGGVGFLGNSTIAGYPPFAGDLFGWGSGSGSG 300
              GQ+G GG   + G+GGG    GN  +  Y    G+L   G   G G
Sbjct: 264 VVPGQLGGGGSPLSSGAGGGD---GNQGLPVY-NMPGNLVSNGGSGGGG 298

[Close]

BLAST of CmaCh09G000200 vs. TAIR10
Match: AT4G22810.1 (AT4G22810.1 Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 205.3 bits (521), Expect = 5.4e-53
Identity = 117/214 (54.67%), Postives = 150/214 (70.09%), Query Frame = 1


Query: 50  NHSNHSDDGDDNNDTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSH 109
           N  +   D D +  +      S   H   RRPRGRP GSKNKPKPPII+TRDS N L +H
Sbjct: 76  NSGSEGKDIDIHGGSGEGGGGSGGDHQMTRRPRGRPAGSKNKPKPPIIITRDSANALRTH 135

Query: 110 VLEVSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRQPSASPT-ASVITLHGRFEI 169
           V+E+    D+V+S++ +ARRR RG+ ++ GTG V NVT+RQP + P+  SV++LHGRFEI
Sbjct: 136 VMEIGDGCDLVESVATFARRRQRGVCVMSGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEI 195

Query: 170 LSLTGTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERL 229
           LSL+G+ LPPPAPP A GLS++LAG QGQVVGG+VVGPL+ +GPV++MAASFSNA +ERL
Sbjct: 196 LSLSGSFLPPPAPPTATGLSVYLAGGQGQVVGGSVVGPLLCAGPVVVMAASFSNAAYERL 255

Query: 230 PLEEEEEGGVQVQPTASQSSGVTGGGQMGEGGGN 263
           PLEE+E             + V GGG    GGG+
Sbjct: 256 PLEEDE-----------MQTPVHGGG----GGGS 274

[Close]

BLAST of CmaCh09G000200 vs. NCBI nr
Match: gi|802604323|ref|XP_012073562.1| (PREDICTED: AT-hook motif nuclear-localized protein 25-like [Jatropha curcas])

HSP 1 Score: 312.4 bits (799), Expect = 8.9e-82
Identity = 193/307 (62.87%), Postives = 219/307 (71.34%), Query Frame = 1


Query: 3   MAGYSEEGGAGSRYVQHHHHHHQLLNPELHLDTPSSSSIPFPHPHLFNHSNHSDDGDDNN 62
           M+GY +   AGSRYV      HQLL PELHL  PS      P     +  N S    D+ 
Sbjct: 1   MSGYEQT--AGSRYV------HQLLRPELHLQRPSLPVQLSPD----SKDNTSPQSKDHK 60

Query: 63  DTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVDS 122
            T +T   + +   S RRPRGRPPGSKNKPKPPII+TRDSPN L SHVLEVS  +DIV++
Sbjct: 61  -TTDTDTAATSSGGSYRRPRGRPPGSKNKPKPPIIVTRDSPNALRSHVLEVSTGSDIVET 120

Query: 123 LSNYARRRGRGLSILCGTGTVANVTLRQPSASPTASVITLHGRFEILSLTGTVLPPPAPP 182
           +SNYAR+RGRG+ +L G GTVANVTLRQP ASP  SV+TL GRFEILSL+GTVLPPPAPP
Sbjct: 121 VSNYARKRGRGVCVLSGNGTVANVTLRQP-ASPAGSVVTLQGRFEILSLSGTVLPPPAPP 180

Query: 183 QAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEEEEGGVQVQP 242
            AGGLSIFL+G QGQVVGG+VVGPL+ASGPV+LMAASF+NAVFERLPL +EEEG VQVQ 
Sbjct: 181 GAGGLSIFLSGGQGQVVGGSVVGPLLASGPVVLMAASFANAVFERLPL-DEEEGNVQVQS 240

Query: 243 TASQSSGVTGGGQMGE-----GGGNANEGSGGGVGFLGNSTIAGYPPFAGDLFGWGSGSG 302
           TASQSSGVTG G  G      GGG    G GGG  F       G  PF+GDLFGWG    
Sbjct: 241 TASQSSGVTGSGGAGHLADGGGGGRGGGGGGGGGAFFNVGGNVGNYPFSGDLFGWG---- 287

Query: 303 SGNATKP 305
            G+AT+P
Sbjct: 301 -GSATRP 287

[Close]

BLAST of CmaCh09G000200 vs. NCBI nr
Match: gi|590597591|ref|XP_007018654.1| (AT-hook DNA-binding family protein, putative [Theobroma cacao])

HSP 1 Score: 312.4 bits (799), Expect = 8.9e-82
Identity = 189/296 (63.85%), Postives = 215/296 (72.64%), Query Frame = 1


Query: 3   MAGYSEEGGAGSRYVQHHHHHHQLLNPELHLDTPSSSSIPFPHPHLFNHSNHSDDGDDNN 62
           MAGY E  G GSRY Q      Q   PELHL  PS +          + S  S D D NN
Sbjct: 62  MAGY-EAAGPGSRYGQ------QPFRPELHLQMPSLTPPS-------DDSRDSQDNDPNN 121

Query: 63  DTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVDS 122
              +    + +     RRPRGRP GSKNKPKPPII+TRDSPN L SHVLE+S+ ADIVDS
Sbjct: 122 PDLSDAAAATSSGGPTRRPRGRPAGSKNKPKPPIIVTRDSPNALRSHVLEISSGADIVDS 181

Query: 123 LSNYARRRGRGLSILCGTGTVANVTLRQPSASPTASVITLHGRFEILSLTGTVLPPPAPP 182
           LSNYARRRGRG+ +L G+GTVANV+LRQP ASP ASV+TLHGRFEILSL G VLPPPAPP
Sbjct: 182 LSNYARRRGRGICVLSGSGTVANVSLRQP-ASPPASVLTLHGRFEILSLCGKVLPPPAPP 241

Query: 183 QAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEEEEGGVQVQP 242
             GGLSIFL+G QGQVVGG VVGPLVASGPV+LMAASF+NAVFERLP +EEEEG VQVQP
Sbjct: 242 GVGGLSIFLSGGQGQVVGGRVVGPLVASGPVVLMAASFANAVFERLPPDEEEEGTVQVQP 301

Query: 243 TASQSSGVTGGGQMGEGGGNANEGSGGGVG--FLGNSTIAGYPPFAGDLFGWGSGS 297
           T SQSSGVTG GQ+ +GGG ++  +    G  F+   +   Y PF+GDLFGWGSG+
Sbjct: 302 TGSQSSGVTGSGQLPDGGGTSSAAASATAGSLFIMGGSGPNY-PFSGDLFGWGSGT 341

[Close]

BLAST of CmaCh09G000200 vs. NCBI nr
Match: gi|731382545|ref|XP_010645606.1| (PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera])

HSP 1 Score: 309.7 bits (792), Expect = 5.8e-81
Identity = 192/308 (62.34%), Postives = 217/308 (70.45%), Query Frame = 1


Query: 3   MAGYSEEGGAGSRYVQHHHHHHQLLNPELHLD-TPSSSSIPFPHPHLFNHSNHSDDGDDN 62
           MAG   E GAGSRY+      HQL  PEL L+ TP         PH     N S D  +N
Sbjct: 1   MAGM--EQGAGSRYI------HQLFRPELQLERTPQQ-------PHQPPQLNDSGDSPEN 60

Query: 63  NDTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSASADIVD 122
            D  +          S RRPRGRPPGSKNK KPPII+TRDSPN L SHVLE+SA ADIV+
Sbjct: 61  EDRTDPDGSPGAATTSSRRPRGRPPGSKNKAKPPIIITRDSPNALRSHVLEISAGADIVE 120

Query: 123 SLSNYARRRGRGLSILCGTGTVANVTLRQPSASPTASVITLHGRFEILSLTGTVLPPPAP 182
           S+SNYARRRGRG+ IL G G V +VTLRQP+A P+ SV+TLHGRFEILSLTGT LPPPAP
Sbjct: 121 SVSNYARRRGRGVCILSGGGAVTDVTLRQPAA-PSGSVVTLHGRFEILSLTGTALPPPAP 180

Query: 183 PQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEEEEGGVQVQ 242
           P AGGL+I+L G QGQVVGG VVGPLVASGPV+LMAASF+NAV++RLPLEEEEE  VQVQ
Sbjct: 181 PGAGGLTIYLGGGQGQVVGGRVVGPLVASGPVLLMAASFANAVYDRLPLEEEEESPVQVQ 240

Query: 243 PTASQSSGVT-GGGQMGEGGG----NANEGSGGGVGFLGNSTIAGYPPFAGDLFGWGSGS 302
           PTASQSSGVT GGGQ+G+GG      A  G+G GV F       G  PF GD+FGW    
Sbjct: 241 PTASQSSGVTGGGGQLGDGGNGSTTTAGGGAGAGVPFYNLGPNMGNYPFPGDVFGW---- 287

Query: 303 GSGNATKP 305
            +G AT+P
Sbjct: 301 -NGGATRP 287

[Close]

BLAST of CmaCh09G000200 vs. NCBI nr
Match: gi|225457666|ref|XP_002273442.1| (PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera])

HSP 1 Score: 309.3 bits (791), Expect = 7.5e-81
Identity = 194/311 (62.38%), Postives = 223/311 (71.70%), Query Frame = 1


Query: 3   MAGYSEEGGAGSRYVQHHHHHHQLLNPELHLDTPSSSSIPFPHPHLFNHSNHSDDGDDNN 62
           M GY  E G+GSRYV      HQLL PELHL  PSS  +P  H      S+  D+  D+ 
Sbjct: 1   MEGY--EPGSGSRYV------HQLLGPELHLQRPSS--LP-QHQATQQPSDSRDESPDDQ 60

Query: 63  DTNNTTNPSQNQHA------SLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLEVSAS 122
           +    T  +    +      S RRPRGRPPGSKNKPKPPII+TRDSPN L SHVLEV+A 
Sbjct: 61  EQRADTEEAAAASSGGATTSSNRRPRGRPPGSKNKPKPPIIVTRDSPNALRSHVLEVAAG 120

Query: 123 ADIVDSLSNYARRRGRGLSILCGTGTVANVTLRQPSASPTASVITLHGRFEILSLTGTVL 182
           AD+++S+ NYARRRGRG+ +L G GTV NVTLRQP ASP  S++TLHGRFEILSL+GTVL
Sbjct: 121 ADVMESVLNYARRRGRGVCVLSGGGTVMNVTLRQP-ASPAGSIVTLHGRFEILSLSGTVL 180

Query: 183 PPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEEEEEG 242
           PPPAPP AGGLSIFL+G QGQVVGG+VVGPL+ASGPV+LMAASF+NAVFERLPL EEEEG
Sbjct: 181 PPPAPPSAGGLSIFLSGGQGQVVGGSVVGPLMASGPVVLMAASFANAVFERLPL-EEEEG 240

Query: 243 GVQVQPTASQSSGVTG---GGQMGEGGGNANEGSGGGVGFLGNSTIAGYPPFAGDLFGWG 302
            VQVQPTASQSSGVTG   GGQ+G+GGG+   G G GV         G  PF GDL  WG
Sbjct: 241 AVQVQPTASQSSGVTGGGAGGQLGDGGGS---GGGAGVPIYNMGASMGNFPFPGDLLRWG 290

Query: 303 SGSGSGNATKP 305
                G+A +P
Sbjct: 301 -----GSAPRP 290

[Close]

BLAST of CmaCh09G000200 vs. NCBI nr
Match: gi|566173628|ref|XP_002307001.2| (hypothetical protein POPTR_0005s27850g [Populus trichocarpa])

HSP 1 Score: 308.9 bits (790), Expect = 9.8e-81
Identity = 192/317 (60.57%), Postives = 228/317 (71.92%), Query Frame = 1


Query: 3   MAGYSEEGGAGSRYVQHHHHHHQLLNPELHL----------DTPSSSSIPFPHPHLFNHS 62
           MAG+    G  SRYV H  +H+ LL PELHL          D+  +++ P P  H    +
Sbjct: 1   MAGFE---GNNSRYV-HGQNHNNLLRPELHLIQRPSSIPSSDSRDNNNTPSPPDHANQTA 60

Query: 63  NHSDDGDDNNDTNNTTNPSQNQHASLRRPRGRPPGSKNKPKPPIILTRDSPNVLGSHVLE 122
           +H  D      +   TNP+       RRPRGRP GSKNKPKPPII+TRDSPN L SHV+E
Sbjct: 61  HHHPDSSATTSSGGGTNPN-------RRPRGRPAGSKNKPKPPIIVTRDSPNALRSHVIE 120

Query: 123 VSASADIVDSLSNYARRRGRGLSILCGTGTVANVTLRQPSASPTASVITLHGRFEILSLT 182
           +S  ADIV+S+S YAR+RGRG+ +L G+GTVANVTLRQP ASP  SV+TLHGRFEILSL+
Sbjct: 121 ISNGADIVESVSTYARKRGRGVCVLSGSGTVANVTLRQP-ASPAGSVLTLHGRFEILSLS 180

Query: 183 GTVLPPPAPPQAGGLSIFLAGAQGQVVGGTVVGPLVASGPVILMAASFSNAVFERLPLEE 242
           GTVLPPPAPP AGGLSIFL+G QGQVVGG VVGPL+A+GPV+LMAASF+NAVFERLPL++
Sbjct: 181 GTVLPPPAPPGAGGLSIFLSGGQGQVVGGNVVGPLMAAGPVVLMAASFANAVFERLPLDD 240

Query: 243 EEE-GGVQVQPTASQSSGVTG-GGQMGEGGGNANEGSGGGVGF--LGNSTIAGYPPFAGD 302
           +EE G VQVQPTASQSSGVTG GGQMG+GGG +  G G G GF  +      G  PF+GD
Sbjct: 241 QEEAGAVQVQPTASQSSGVTGSGGQMGDGGGGSGTG-GAGSGFFNMAGGAHHGNYPFSGD 299

Query: 303 LFG-WGSGSGSGNATKP 305
           LFG WG     G+A +P
Sbjct: 301 LFGPWG-----GSAARP 299

The following BLAST results are available for this feature:

BLAST of CmaCh09G000200 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AHL27_ARATH	1.3e-69	52.57	AT-hook motif nuclear-localized protein 27 OS=Arabidopsis thaliana GN=AHL27 PE=1...	[more]
AHL29_ARATH	8.6e-69	54.43	AT-hook motif nuclear-localized protein 29 OS=Arabidopsis thaliana GN=AHL29 PE=1...	[more]
AHL25_ARATH	5.8e-65	52.74	AT-hook motif nuclear-localized protein 25 OS=Arabidopsis thaliana GN=AHL25 PE=1...	[more]
AHL19_ARATH	1.1e-55	49.48	AT-hook motif nuclear-localized protein 19 OS=Arabidopsis thaliana GN=AHL19 PE=2...	[more]
AHL24_ARATH	9.6e-52	54.67	AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana GN=AHL24 PE=2...	[more]

BLAST of CmaCh09G000200 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A067KKW8_JATCU	6.2e-82	62.87	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08028 PE=4 SV=1	[more]
A0A061FMX7_THECC	6.2e-82	63.85	AT-hook DNA-binding family protein, putative OS=Theobroma cacao GN=TCM_034810 PE...	[more]
F6I0P7_VITVI	4.0e-81	62.34	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g04110 PE=4 SV=...	[more]
B9H5W8_POPTR	6.8e-81	60.57	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27850g PE=4 SV=2	[more]
B9R8U1_RICCO	8.9e-81	62.58	DNA binding protein, putative OS=Ricinus communis GN=RCOM_1602220 PE=4 SV=1	[more]

BLAST of CmaCh09G000200 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20900.1	7.5e-71	52.57	Predicted AT-hook DNA-binding family protein	[more]
AT1G76500.1	4.9e-70	54.43	Predicted AT-hook DNA-binding family protein	[more]
AT4G35390.1	3.3e-66	52.74	AT-hook protein of GA feedback 1	[more]
AT3G04570.1	6.2e-57	49.48	AT-hook motif nuclear-localized protein 19	[more]
AT4G22810.1	5.4e-53	54.67	Predicted AT-hook DNA-binding family protein	[more]

BLAST of CmaCh09G000200 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|802604323\|ref\|XP_012073562.1\|	8.9e-82	62.87	PREDICTED: AT-hook motif nuclear-localized protein 25-like [Jatropha curcas]	[more]
gi\|590597591\|ref\|XP_007018654.1\|	8.9e-82	63.85	AT-hook DNA-binding family protein, putative [Theobroma cacao]	[more]
gi\|731382545\|ref\|XP_010645606.1\|	5.8e-81	62.34	PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]	[more]
gi\|225457666\|ref\|XP_002273442.1\|	7.5e-81	62.38	PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]	[more]
gi\|566173628\|ref\|XP_002307001.2\|	9.8e-81	60.57	hypothetical protein POPTR_0005s27850g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005175	PPC_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G000200.1	CmaCh09G000200.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	DUF296	coord: 109..221 score: 5.0
IPR005175	PPC domain	PROFILE	PS51742	PPC	coord: 103..243 score: 33
None	No IPR available	GENE3D	G3DSA:3.30.1330.80		coord: 108..245 score: 1.7
None	No IPR available	PANTHER	PTHR31100	FAMILY NOT NAMED	coord: 18..295 score: 1.2E
None	No IPR available	PANTHER	PTHR31100:SF5	AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 29-RELATED	coord: 18..295 score: 1.2E
None	No IPR available	unknown	SSF117856	AF0104/ALDC/Ptd012-like	coord: 105..234 score: 3.14

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G000200	CmoCh09G000190	Cucurbita moschata (Rifu)	cmacmoB027

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G000200	Cucurbita maxima (Rimu)	cmacmaB051
CmaCh09G000200	Cucumber (Gy14) v1	cgycmaB0751
CmaCh09G000200	Cucurbita moschata (Rifu)	cmacmoB047
CmaCh09G000200	Wild cucumber (PI 183967)	cmacpiB025
CmaCh09G000200	Cucumber (Chinese Long) v2	cmacuB024
CmaCh09G000200	Melon (DHL92) v3.5.1	cmameB037
CmaCh09G000200	Watermelon (Charleston Gray)	cmawcgB017
CmaCh09G000200	Watermelon (97103) v1	cmawmB039
CmaCh09G000200	Cucurbita pepo (Zucchini)	cmacpeB045
CmaCh09G000200	Bottle gourd (USVL1VR-Ls)	cmalsiB028
CmaCh09G000200	Cucumber (Gy14) v2	cgybcmaB469
CmaCh09G000200	Melon (DHL92) v3.6.1	cmamedB036
CmaCh09G000200	Silver-seed gourd	carcmaB0134
CmaCh09G000200	Silver-seed gourd	carcmaB0501
CmaCh09G000200	Cucumber (Chinese Long) v3	cmacucB0031
CmaCh09G000200	Watermelon (97103) v2	cmawmbB022
CmaCh09G000200	Wax gourd	cmawgoB0029
CmaCh09G000200	Wax gourd	cmawgoB0041