CmaCh09G000170 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh09G000170
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	SWI/SNF complex subunit SWI3B
Location	Cma_Chr09 : 100296 .. 109844 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCATTTTTTGCTTTCCCGCCTCGCCTGAGCCGAGCGATGGTCAGCAACTTCGTTTTGTTATTCCGATAGGCTCGCCGGAGCTTCCTTTCTCTATTACTTCCTCATCGTCGGACGCTTTGTTCTTTGTATATATCCATGGCGGCTAATTTACCGGTCCAAGATCCCCCCACGGATGCTTCTGCCAAACAACCTACGCCTTCGCCCTCCCCCACTCTTGTAACCCCTCCCGTTAAGATCGACACTCCTTCATCTGACTCCGGCAAGACCCCCGCCGCCGTTCCCGCTTCCACCCCTCGCCCTGAGGACCTCCCTCAATCCGCCTCTCCCGATCCAGTTCATCTTCCCAGCTACTCCAGTAAGTATAAATTCCTTCCTGCATTCTCTGCAACCCCTTCAGCTTCTTGTTTTTCGATCTTAACTCTTAGTTTTGTTATTTTGCTCCCTTATTTTCTCGCCCAGGATGGTTCTCCTGGAACGGCATTCACGAGTGCGAAGTTCGGTTCCTTCCGGAGTTCTTCAATTCACGGTCGCCCTCTAAAAACCCTAGGGTTTACAAGTACCTTCGAAATGCTATTGTCAAGAATTTCAGAGAATGCCCTTCCAAGAAGATCACATTTACTGATGTCCGAAAGACGCTCGTTGCCGATGTAGGATCTATTCGTAGGGTTTTCGATTTTCTCGAGGCTTGGGGTCTCGTCAATTACTCGCCGTCCGTCCTGAACAAACCGCTCAAGTGGGAGGACCGGGACTCGAAGTCTAATTCGTCCGCTTCGCACACCGGTGAACCTGGAGGTAGTTCCGCAGATTCTTCAGCTCCTAAAGACGCTTCTAAGAGAGTATGCAGTGGTTGCAAGTCTATTTGTAGCATCGCCTGCTTTGCATGCGATAAGGTTCGTATTCACTTGCATGGTGAATGTAGTATAGTCTCGTCTATCTGTTTTCTTGTTTCCGCGAATGAGTTTGTGTTCCGTTCCATCCTCAGCGTATTCTAATTTCCAAGTATTTTCGAGGCAAGTCTTCGACTCTTTGGTATGTATTAATTTCATGATTTTTCAAGTAGTTGTAACTTTCGATCGCTGGGAGGGAGCTTGGCGTAGTTTATTAGGTCCCGAGGCGGCCGGATTAATTTATTGTAGATAGCGATGCAGCTAAAGATATTTTGGTCTTTAATTTGTCAAACGCCTTCTGATTCGGCTTTTTATCTGTTCATTTTCTTAATCTTCCTGTTTAAATTTCGCTAGAATGTTTGTTGACATATTGTGGTTTTACTGGATAGGTTGTCTAACTGTTTTTGGTGATATGATGAATTTGGAACTTGGATAGACTTGTCCTTTTTAAATGGACATTAAATGAATTGATATAATTTAATATATTCGAACTAATATGCTGGTCATTGTTTTGTACAGTTTGATTTGACGCTTTGTGCGAGGTGCTATGTTCGTGGAAACTATCGAGTTGGTGTTAGTTCTTCAGATTTTCGACGTGTTGAGATCAATGATGAGACACGAACAGATTGGACTGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGACGCATCATGGTGATGATTGGAAAAAGGTCGCACAACATGTTGGTGGCAGAACTGAAAGGGAATGTGTTGCCCATTTTGTGAAGCTTCCTTTGGGGGAGCAGTTTCTTGGTTATCCAGATTCCGGAAATGTTGGTGGCAGAACTGTAGTGAAGGATCATGCCAGTGCCGATCTTACATTAGAAAGTACACCTCTTACTAGTAAAAGAATCCGTCTATCTCCTCTGGCAGATGCAAGTAATCCCATAATGGCTCAGGTTAGTGTTGGTGGTAGTCATTTCTTTTAGCTTGCACTAGCTGCTTACACGTTTGTTACTTCACCAACACCTTGTATTATGGGAGTCCTATTCACGTGCAAAAAGAAGCGTGTATTGGAGGTCTGATTTGCATATGAGTGGTGGCAAAGGTAAAACAACTGTGTATCAGTTTGATGCCTTCTATTGTAATTCCCTTTCTTTTATAGGTTTTTTTTTTTAACATTTTGTGGGTTGGATTGGGCTATTAATAAATCAAAAATTAGAGATGGCTTATGTATTTTATCACAAGAGATGCTCTTTTAATGGATGAACTTGGGTTAGTTGTCTTCACTCGAACTAATTTCTTTGAAAAAATCAAATTACTCAAGTTATAGTTCGAACCACAAACTAGCGTGGACAAGCCCATAATTCTAGTTAACCTAACTACGGGTTCCATTGACTTTTGTAGCATACCATTCTTCTGCATTACATGTATACCTTTCCTCTGCAGTAATTTTCCAAGAATATCTATGGACCTGAAACTGGTATTGGACCTATTGGTCACTCAAAACTGTCTATGGTTTTCATTTGCTATATGAATAGAGATCTCATCATGTAATTGATATTTATGCTCTCAGGCTGCCTTTTTGTCATCTTTGGTGGGTGTTGAGGTAGCAGAAGCAGCTGCCCATGCAGCTGTGGTTAAACTTTCTGATATGGGCTTTGGAGGAGATGGGGAAATTGCCACAGCTGTCGCTAGGAATATAGGAGACCAAGGTATTAGCTTTGTTTCTGTTGATGAATTTTTTCACTGTAATTCTTAGTTTATTGAAGTTTGAATGCTTATCTTTTTCTTTGCAATTTGAAGTTGACCTGATCATCTACTAGGAATACTTATCTTTTTATATGAGAATTCCATTGATGATTGAAATTTATAAAAGGGATGTAATATCTATGGTGTTTACAAAAAACTTTTCCAATTTGTAACGAGGGAGGTATAACTATAGGAAGTAAGAATATTAGATAGTTTACACCAAAATATAGTTTGGTAAACAACATTGTCGAAAGATTGTCTTTTCTGCAAATATTCTCTAATTTCTTTCTTTCCACAAATTTCAAAATAAAGCCATGATGAGGTTTTTACATAGTAGGGCTTTTGGATTCTTGAAAGGATGGTACGTTAAGGCCATGTCCAATAGATCCTTTACATCCTTAGGAAATGTGAGATGTCATTCGATTATATTGAGAATTGTTGTCCAGAAATTCTGAGCTTACATGCATGGCATAAATAAGTGTTTTTGTGATTCATTTTCTTTCTTGCACAATGGACACCAATTTGGAGGAAGAGTGATGGATCTTTTTTTTTTTTGTTGAAAATTTTCACTTGTGCTGGACACCAATTTGCTGGAGAAAGAGTGATGTATGGAAAGTTCAGTTAGTGATGAGGTTTTGATGTTTCTTGATGTACTTCTCAGCCTTCCGTGGGGTTGATTTTTGTTTGATTAGGAGTATATTTGGCCTTTATAATATTTCTCCACTAAGTCTTTTCTTCATGATGATCTCCATCCATTTCGCGAGGAGAGCTTTGTTCTTCTTTATCAAGAAAAGACCGAAACCTCCCTTTTCTTTCAGGAGATTTATAATATTCCATCGAGTGTGGGTCATCTTTCCACCAGTAGTTTTTGAATAATCTTTCTATATTTGCAGCCACTTTTTGGGGCATTTCAAACAAAGACATGTAGTAAGTGAGGAGGTTGGATAATGTGGCTTGTACTAGAGTGAGTCTTCCGCCTTTTGAAGTATAACAACTTCCAAAAGGAACAAAAGATTTGTGGTTTCCTTTTAAAGGTAGTCTAGGTACATATTCGACCGTTCTCCCTTTTTACAACCATAAATGCTAGCAAAATTTTTCAATAATCTTTGTGCTAATATTTGATGCCATGGTCTCTATTTTTTTTTCTTGGAGATTGATATTTTGTCCAAAGAATCCTTCGAAGGTTTTTACCGTCTCAATCATGTTTTTTTATGGAAGAGGCATCTACAAGTCAGAAAAGAGGATTGTGTCGTCCGTGAACGGAAGGTGGTTGATGCTTAAGACTTCATTACCAATTTGAAAATTTTTTATCTGCCTTTCGTATTCTGCTTTTGCCAGTAGGCGATTGAAGCAATCTATTCCCATGATGAAAAAAAAGGGGATAGTCGATCTCCTTGACAGAGACCTCGTGTTACATAAACCTCCCCTCTCGGTCTTCCATTGATGCTGATGAAGAAGTTTGTGGATGAGATGCGTCCTTTCATCCACCTTTGCCATTTTGAGCCAAAGCCTTTTGCCACATGAATGTTTTCAAGGAAAGTCCAATTAACCTGTCGAAGGCCTTTTCCATGTCAAGTTTGATGACTACACCTTTTTGTTTCTTTCTCTCTCATTCATCTATGAGTTCGTTTGCCAAGAGGGATGCATTGAGAATTTGTCGCCCCTCTACAAAAGCGGTTTGTTGTGCTCTTATTGTGAAGGGGAGAACCTTTTTAAGACATTTTGATAGTTATGATTTTAAATAGTTAAGTCGTGAGACTTATTGGACGAAAGTCTACAACAGTGTGGGCATCCAATTTCTTTAAGAGTAGACATATCTATGTTTCGTTTAGGTTGCCATTGATAACTCTGTTTCGAAAAAAATCTTTGAATACTTTCACGATATCAATTCTCATAAAGTTTCAACATTTTTTAATATATTCTGAGGTAAAACCATCTGGTCCTATAGTATGGTTGGGTCCCAGATGTTGAATTGCCTTTCGCACCTCTTCTTTGGTGAAAACAACCTCGAGGGCGGTAGCTTGATATTGATTAATAGGACTCCACTCAAGATCATGGGGAAATTCGCAAAGAGCATTGTTCTTTGTGTATAAGGACGTGTAAAATGACGCACATTTTGAGACAATTTCTTTTTCGGTTACAAAACTTCTGCCTTTTGTGGATAGAATTTCCATGATGGTACTCTTTTGTTTCTTTGTAGCCATGATACAATGGAAAATTTTGGAGTTTATGTCACCCTCCTCTAACCATCGTTTTTTTTACATCTTTGTCTCCAAGATTATTCTTCGTTTTTTTTACATTTTTGTCTCCAAGATTGTTCTTCCTTTCCTGCCAATGAAATAAGTTTTGATTTCATGAGTTTTTTTTTTGTGTTGAACTAGTGCGATAGATTCAATTTCCTCTATCTAATCAAGGAGAGCAATTTCAGTTAGTAGTTGGTTTCTTTTTGTGAAAATACAACCGAAAACCTCCTTGTTCCATTTCTTTAAGACTTCTTTTAGTCTATTAAGTTTGTTGATGAAATCGTGTCCCGACCGTCCATGGAAGGGCTTATTCTTCTACCAGTATTCTATCATTGGCAAAAATTTAGAATGGTTCAACCACATATTCTCAAATCGGAAGGCGAGGAGCCCCATTTACAGCAACCCATGGAATTAGAATGAGATAATGATCAAATGTAGGTCTATTCAGTCTTTGAACATCGTCGGTACTGCTGTGGCTAGAAATCTATCGATGAGTGTCAAGGTAGGGGGAAATATGTTGTTTGACCATGTATGAAGTCCATTACTGAGGGGAAGGTCAATGAGTTTAGGTTTTCCACTGGAATTTTCATGTGCCCTTTGAGAGATATTGAAGTCACCCGCCAAAAACCAATTCTCTGTAACTAGGCAAGGACTGATAAGTCCTGTAATTCTTGATATCTACAGGACCATAGATTCCTATAGTCCAAAATTTGTTAATATCAGCTAGTGTAATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCTCTAGCAAACGCGTTTTAAAGCCTTGAGGGGAAGCTTGAAAGAGAAAGCCCAAAGAGGACAATATCTGCTAGTGGTGGGTCTGGGTCATTACAAATGGTATCAAAACCAGACACCGGACGATGTGCCAGCCTTCTTGCCCTTCCCTGAAGGGGGTAGACACGATGCGGAATCTTGGAAGATGATATCTTGGAAGATGATGATATCGAGACTTCTGCAGGTATGAAACCCCACGAGTTTTTCTTAATACAAATGGTGGCTTCCATCAAAATCTCAACAAAACCTCCACAGGCATCTCCTATGTGTTTCAAAATTTTAATGTCCGAGTGATTGAAAGCCAAATTTTTTATTTTAATTCACCCTCCATGCGAGGGAACCATTGGGTCGTTCAAGTGCTTCTCATTAGACCAAGGTTCTACTTTCAAAGTGTAGTTTTCAACTTTTTGCCAGTCTTTCATTACAAATTAATGAGACATTCTCTTTTGTCCGCAACAGAGAATTGCCTTGTCTTCTCTTTAGGGGTTCAGTTGACAAAAGTCATTGAGCTAGATTGGGTTCTCCTGTTTATCATAAACCAATCGTCGTAAAATTGTTTTTTTTTAGTGATAATCACTATCACATCCCATACAATATGAATGAAAGAGTGGGGAAACTCGTTGTTGGTCGTCTTGGCCTTTTTGTTTAGGATCGAAAGGTATGTTTTTGCATGTCATTTGTGGCGACTTCTTATTAACAAGCGAGAGTCGTTTTGGTTGATGGAAGTGTCTATGGTCTTGTCTTCTACTATGAGATCTTGAGTTTGGTTGATGGTTTGGTTTTTTAGTGGACAAGAAGGGATAGTTTCCAATGAGATTGAAGAAAGCTATCCAACCTTTTCGTTCTTCGCCCACTGGGACAAAAAACTTGTTAAGACCTCCATTTCCATGAAGTAATGAGATTTCAGCCATAGTACCTTTCTTGTATATGAGTTTTTCTATCTAAATGGTCTCTTCTGGAAAACGTTTCTCAAAGAATTTTTGGTTTAATGGAGCAAATAGTAATGCTTCGTATGATGTTTTCAGCCATTTGAAATAGTCCCATTTCAATGATAGAAAAAAAGTTCTCTGGTTGTCAGTTTGCATCATTGAAGTGTTCTGTGTGGTGCCATGGGGCCAAATTTTGCGCATCTTCTTTTTCTTTTTATTGGATCTATGCTTTCATTTTTGCTGATTATGAGTTTACGAATTGTGCCACAAAGGAAAAATTCAGGGTCATGTTGATGTTAACTCTATAAGTGGCTAACTCAAGGTGTATCTGATATTTTATGTTCAATTTTTTCATTCTTCAGCATGTTTGTTAACTATTTCTTTGTTTTGTAATTTGTATTATAATTTGAGTTCAACACATTTAGAGATAGGGAATCAAACCTCCAACTTCTGAAAGAATTGGTATTTTAGCCGTTGAGCCATATTCATGTTAGAAATTTATATTATAATTTATGAATATGTTTTGAAATTTTTTTACGATTTCTATGAGTTTTCTTTTTCTTCTTTTACTAAGTACACTAAGTATACAAATGCTGCCCCAAAAAATGCAAACAAGAATGCTCGCAGGAGTTGATAAGATAGGGAATTAATTAAAAAAAATATATTCACAGAGTACATCTAGAGTGATGGAAATTTAGCCAAACAAAATATCAACTCAAGTCTTTCTTTTCATTAAATTTTCCTTGCTAACCACACTCCCAAAGTAATAAGCTTTAACAACTAAAGTTTATCTTTCCTTTAAAAGTTCTAGGAATTCTTCCTAACCATGCTCCTTGATAAGCTTTAACCGGATCACCTACGAGCATCTTTGTCTTCCCTTTGAGCTTTGGCCCCCACAGTAGTTGTTGAGATTCCTCTTTACCTTGCCATCTCAACATCAGCTACATGTAAATGTTTAAACAATTCATACAAACAATTATGACCAACGTGACTGGTTGGGTTCTCGAGGCCTGCCAAGATCAAAAAACTGGTTTCCTGTTATAATTTGTAGAAATAGTGGACCAGATCGATATTCCAAGGGATCCAGACAATCAATTTATTATAATTAAATTTCAATAAGAGGTAACGGAGGTTAGTTGTTTAAAACTTGAACGATGGAAACAAAGAAATAACAGATAAGTGCAGGGGAGAAACTAAATCTTACCGAACTTCCAATTCAAAGGTACAGTTGCATCCAATTGTAGAATCGATCACAGGTATTCAAAACAATTGTCGTTGTTGGGCATTTTGACTTGATACCCAGTTAGCGTCTTGATGCTTCCTCCTTGAGATTTTTTTTAGTTGGACTCCATTTTCCCATGAGTCGACTGCTCGAATTATGTGAAATTAGCATCTTTTTGGTCCCCGTCCTTCCAAAACGCCCCGATTTGCTCTAAATTGCTCAATCCCTACAATTCGGATAAATAGACATGTGAGAGCAACGGAACTAGCATGAATTTAAGGCTATAAAATAGCACATGTTAGGTGCTATCTCAATTGCACCGAAAGAAAGTTGTAGCTTCTTCCATATAACCTCCGTATTGGACCCCAGCCTACAACATCATGAAGAGATCTTGCATGCTCTGATGCCTAGTTCTAGATGTGAGACTTTTAGGGTGTAAATTATTAAGCTTTTCACCATGAGGCCAGAACCTTGGAGAATTTTTACCCCATTTCATTCGTGTGTTGCCTGTCGATGCTTGGGTTTAAGAGTGTACTTAGAAAATCTTATTTGCAATTTTTCAGTCCTTCAAAAGTTGATATCTTATTTCCCTGCCAATTTTTTTTTCTTTAATTACGGATGCAGAGAGATAAATGTACCTAATTTGAGTCTCTGTTGCACCAACCAGTTTCAACCTTATTCCGTATCTGCTGCTAGATATGACTATGCTACGGTTTTTCGTCCCTAATGGAGAATGTTCAAACTTGTTTTGCGGGTGAAATCCTAGTTTCTTTTCCCTGGGCCTTTCAATACCTAAGTCTTCCTTTTCCTGGCAGTGATATGATGCTCTGCAGTTGATTTGGATGAATTGGCGTTCCTGTACCATTTCCTTCCCACAAAAATCTCTTCAAATTTATTTCTATTATTTATGCAACGTTACTTGGCAGTTTGAACACCAACATAAGATAGGTACTTCTGGACACATAATTATACTGACCAAGTTATGTTAAAATTTTCAGAAATTCATTGTTACGGGATTACCTCCCAAGCAAACGCTGGAAATTGTAGAAGTCTATTTCATTATGTATCAACTTGTATACATTTGATATATGGTATTCATATAAAACTCAAATTTCAATTTGTTCTATAATATGGTGGTTTTCTAGAGTGGTCTGCTGCTAATGTGAAGTATATTTGTCATTGAGGTAGTATGGGATTGTCATATCTCTTCTGTTCTGATTCAGGAAACGACGTTGTATCCTGTGGAGGCAGCACTGCTAGGAGCTCATTTAGTGTGTCTTCGGTGGATGCAAACTCACAGATTGAGAAAGAAGAGGTGGCTGTGGAGAAAGCAATATCTCATATACTAGACGTCCAAGTAAGTCTTTGGTATTGTGGTAAGATGAGAAGTTTGTGTTAATCGCTAATATTGGAACTTATTGCCAACAGATGAAAGAGGCTGTAGATAAGCTTGATCGTCTGGAGGAGGTAGACTTGCAGATGGAGAAGGAATTTAAGCAATTAGACCAAATGAAAAGCATGCTTTTTGTTGATCAACTGAATCTCTTATTCCACAAAGGATATATCCCTACCATCGAAGACAAGAACAGTAAGAATCTAAGTACTTATTGATCGTTTTCCCTAATTTAACCATGTTTCTTTCTTTTACTTCTCTTCAGAATCACAATTGTATATCAGCACACCTCTGCAACATCCCATTTTAAGAGTTAAACGCTTATAA

mRNA sequence

TTCCATTTTTTGCTTTCCCGCCTCGCCTGAGCCGAGCGATGGTCAGCAACTTCGTTTTGTTATTCCGATAGGCTCGCCGGAGCTTCCTTTCTCTATTACTTCCTCATCGTCGGACGCTTTGTTCTTTGTATATATCCATGGCGGCTAATTTACCGGTCCAAGATCCCCCCACGGATGCTTCTGCCAAACAACCTACGCCTTCGCCCTCCCCCACTCTTGTAACCCCTCCCGTTAAGATCGACACTCCTTCATCTGACTCCGGCAAGACCCCCGCCGCCGTTCCCGCTTCCACCCCTCGCCCTGAGGACCTCCCTCAATCCGCCTCTCCCGATCCAGTTCATCTTCCCAGCTACTCCAGATGGTTCTCCTGGAACGGCATTCACGAGTGCGAAGTTCGGTTCCTTCCGGAGTTCTTCAATTCACGGTCGCCCTCTAAAAACCCTAGGGTTTACAAGTACCTTCGAAATGCTATTGTCAAGAATTTCAGAGAATGCCCTTCCAAGAAGATCACATTTACTGATGTCCGAAAGACGCTCGTTGCCGATGTAGGATCTATTCGTAGGGTTTTCGATTTTCTCGAGGCTTGGGGTCTCGTCAATTACTCGCCGTCCGTCCTGAACAAACCGCTCAAGTGGGAGGACCGGGACTCGAAGTCTAATTCGTCCGCTTCGCACACCGGTGAACCTGGAGGTAGTTCCGCAGATTCTTCAGCTCCTAAAGACGCTTCTAAGAGAGTATGCAGTGGTTGCAAGTCTATTTGTAGCATCGCCTGCTTTGCATGCGATAAGTTTGATTTGACGCTTTGTGCGAGGTGCTATGTTCGTGGAAACTATCGAGTTGGTGTTAGTTCTTCAGATTTTCGACGTGTTGAGATCAATGATGAGACACGAACAGATTGGACTGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGACGCATCATGGTGATGATTGGAAAAAGGTCGCACAACATGTTGGTGGCAGAACTGAAAGGGAATGTGTTGCCCATTTTGTGAAGCTTCCTTTGGGGGAGCAGTTTCTTGGTTATCCAGATTCCGGAAATGTTGGTGGCAGAACTGTAGTGAAGGATCATGCCAGTGCCGATCTTACATTAGAAAGTACACCTCTTACTAGTAAAAGAATCCGTCTATCTCCTCTGGCAGATGCAAGTAATCCCATAATGGCTCAGGCTGCCTTTTTGTCATCTTTGGTGGGTGTTGAGGTAGCAGAAGCAGCTGCCCATGCAGCTGTGGTTAAACTTTCTGATATGGGCTTTGGAGGAGATGGGGAAATTGCCACAGCTGTCGCTAGGAATATAGGAGACCAAGGAAACGACGTTGTATCCTGTGGAGGCAGCACTGCTAGGAGCTCATTTAGTGTGTCTTCGGTGGATGCAAACTCACAGATTGAGAAAGAAGAGGTGGCTGTGGAGAAAGCAATATCTCATATACTAGACGTCCAAATGAAAGAGGCTGTAGATAAGCTTGATCGTCTGGAGGAGGTAGACTTGCAGATGGAGAAGGAATTTAAGCAATTAGACCAAATGAAAAGCATGCTTTTTGTTGATCAACTGAATCTCTTATTCCACAAAGGATATATCCCTACCATCGAAGACAAGAACAAATCACAATTGTATATCAGCACACCTCTGCAACATCCCATTTTAAGAGTTAAACGCTTATAA

Coding sequence (CDS)

ATGGCGGCTAATTTACCGGTCCAAGATCCCCCCACGGATGCTTCTGCCAAACAACCTACGCCTTCGCCCTCCCCCACTCTTGTAACCCCTCCCGTTAAGATCGACACTCCTTCATCTGACTCCGGCAAGACCCCCGCCGCCGTTCCCGCTTCCACCCCTCGCCCTGAGGACCTCCCTCAATCCGCCTCTCCCGATCCAGTTCATCTTCCCAGCTACTCCAGATGGTTCTCCTGGAACGGCATTCACGAGTGCGAAGTTCGGTTCCTTCCGGAGTTCTTCAATTCACGGTCGCCCTCTAAAAACCCTAGGGTTTACAAGTACCTTCGAAATGCTATTGTCAAGAATTTCAGAGAATGCCCTTCCAAGAAGATCACATTTACTGATGTCCGAAAGACGCTCGTTGCCGATGTAGGATCTATTCGTAGGGTTTTCGATTTTCTCGAGGCTTGGGGTCTCGTCAATTACTCGCCGTCCGTCCTGAACAAACCGCTCAAGTGGGAGGACCGGGACTCGAAGTCTAATTCGTCCGCTTCGCACACCGGTGAACCTGGAGGTAGTTCCGCAGATTCTTCAGCTCCTAAAGACGCTTCTAAGAGAGTATGCAGTGGTTGCAAGTCTATTTGTAGCATCGCCTGCTTTGCATGCGATAAGTTTGATTTGACGCTTTGTGCGAGGTGCTATGTTCGTGGAAACTATCGAGTTGGTGTTAGTTCTTCAGATTTTCGACGTGTTGAGATCAATGATGAGACACGAACAGATTGGACTGATAAGGAGACTTTGCATCTTCTTGAAGCTTTGACGCATCATGGTGATGATTGGAAAAAGGTCGCACAACATGTTGGTGGCAGAACTGAAAGGGAATGTGTTGCCCATTTTGTGAAGCTTCCTTTGGGGGAGCAGTTTCTTGGTTATCCAGATTCCGGAAATGTTGGTGGCAGAACTGTAGTGAAGGATCATGCCAGTGCCGATCTTACATTAGAAAGTACACCTCTTACTAGTAAAAGAATCCGTCTATCTCCTCTGGCAGATGCAAGTAATCCCATAATGGCTCAGGCTGCCTTTTTGTCATCTTTGGTGGGTGTTGAGGTAGCAGAAGCAGCTGCCCATGCAGCTGTGGTTAAACTTTCTGATATGGGCTTTGGAGGAGATGGGGAAATTGCCACAGCTGTCGCTAGGAATATAGGAGACCAAGGAAACGACGTTGTATCCTGTGGAGGCAGCACTGCTAGGAGCTCATTTAGTGTGTCTTCGGTGGATGCAAACTCACAGATTGAGAAAGAAGAGGTGGCTGTGGAGAAAGCAATATCTCATATACTAGACGTCCAAATGAAAGAGGCTGTAGATAAGCTTGATCGTCTGGAGGAGGTAGACTTGCAGATGGAGAAGGAATTTAAGCAATTAGACCAAATGAAAAGCATGCTTTTTGTTGATCAACTGAATCTCTTATTCCACAAAGGATATATCCCTACCATCGAAGACAAGAACAAATCACAATTGTATATCAGCACACCTCTGCAACATCCCATTTTAAGAGTTAAACGCTTATAA

Protein sequence

MAANLPVQDPPTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHTGEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFLGYPDSGNVGGRTVVKDHASADLTLESTPLTSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSVSSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSMLFVDQLNLLFHKGYIPTIEDKNKSQLYISTPLQHPILRVKRL

Homology

[Close]

BLAST of CmaCh09G000170 vs. Swiss-Prot
Match: SWI3B_ARATH (SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana GN=SWI3B PE=1 SV=1)

HSP 1 Score: 423.3 bits (1087), Expect = 3.8e-117
Identity = 245/485 (50.52%), Postives = 330/485 (68.04%), Query Frame = 1


Query: 17  KQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLPQSASP-DPVHLPSYSRW 76
           K P P  S  ++       TPS     +  A  AS  +   LP S+S  D +H+PSYS W
Sbjct: 4   KAPDPGGSGEILP-----STPSLSETTSGGAAAAS--KSAQLPSSSSDIDNIHVPSYSSW 63

Query: 77  FSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECPSKKITFTDVRKTLVA 136
           FSW  I++CEVR LPEFF+SRS SKNP+ Y YLRN+I+K +R+   +KI+FTDVR+TLV+
Sbjct: 64  FSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVS 123

Query: 137 DVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHTGEPGGSSADSSAPKD 196
           DV SIRRVFDFL++WGL+NY+ S   KPLKWE++++   S+     EP      ++  K+
Sbjct: 124 DVVSIRRVFDFLDSWGLINYNSSASAKPLKWEEKEA-GKSAGDAASEP------ATTVKE 183

Query: 197 ASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEINDETRTDWT 256
            +KR C+GCK+ICSIACFACDK+DLTLCARCYVR NYRVG++SS+F+RVEI++E++ +W+
Sbjct: 184 TAKRNCNGCKAICSIACFACDKYDLTLCARCYVRSNYRVGINSSEFKRVEISEESKPEWS 243

Query: 257 DKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFLGYPDSGNVGGRTV 316
           DKE L LLEA+ H+GDDWKKVA HV GRTE++CV+ FVKLP GEQF+   DS +  G  +
Sbjct: 244 DKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDSED--GLEM 303

Query: 317 VKDHASADLTLESTPL------TSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAEAAAH 376
                 +D+  ES  +       +KRI+L+PLADASNPIMAQAAFLS+L G  VAEAAA 
Sbjct: 304 FDQIKDSDIP-ESEGIDKDGSSPNKRIKLTPLADASNPIMAQAAFLSALAGTNVAEAAAR 363

Query: 377 AAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSVSSVDANSQIEKEEV 436
           AAV  LSD+ +  D       +R+   Q  +  S  G T R+    +  DA S IEKEE 
Sbjct: 364 AAVRALSDVDYEADKN----ASRDPNRQDANAAS-SGETTRNESERAWADAKSLIEKEEH 423

Query: 437 AVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSMLFVDQLNLLFHKGYIP 495
            VE AI   ++V+MK+  D++   E++DL+ME+  KQL++++++LFVDQLN+ FH     
Sbjct: 424 EVEGAIKETVEVEMKKIRDRIVHFEKLDLEMERSRKQLEEVRNLLFVDQLNIFFHTRKAR 466

[Close]

BLAST of CmaCh09G000170 vs. Swiss-Prot
Match: SWI3A_ARATH (SWI/SNF complex subunit SWI3A OS=Arabidopsis thaliana GN=SWI3A PE=1 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.4e-34
Identity = 130/483 (26.92%), Postives = 210/483 (43.48%), Query Frame = 1


Query: 61  SASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECP 120
           SA  +   +P+ S WF W+ IHE E R   EFF   S ++ P+VYK  R+ I+  FRE  
Sbjct: 7   SAEIELYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDT 66

Query: 121 SKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHT 180
            +++TFT VRK LV DV  +++VF FLE WGL+N+S S     LK  D     +++    
Sbjct: 67  CRRLTFTSVRKFLVGDVNLLQKVFLFLEKWGLINFSSS-----LKKNDHLLSVDNAKIEQ 126

Query: 181 GEPGG-----------------------------------SSADSSAPKDASKRVCSGCK 240
           G P G                                   S   S   K     VC+ C 
Sbjct: 127 GTPAGIRVTATPNSLRPITAPPLVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAHCG 186

Query: 241 SICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEINDETRTDWTDKETLHLLEA 300
             C    +  +K  + +C +C+  GNY    ++ DF+   I +     WT++E L LLE+
Sbjct: 187 ERCDSPFYQHNKGIVNICEKCFKNGNYGENNTADDFKL--IGNSAAAVWTEEEILLLLES 246

Query: 301 LTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFLGYPDSGNVGGRTVVKD------- 360
           +  HGDDW+ ++Q V  ++  +C++  ++LP GE  +G   SG +    + +D       
Sbjct: 247 VLKHGDDWELISQSVSTKSRLDCISKLIELPFGEFLMG-SASGRLNPSILTEDENTEQVQ 306

Query: 361 ------------HASADLTLESTPLTSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAEA 420
                           D   E  P  +KR R++ +++  + +M Q A ++S VG  VA A
Sbjct: 307 TDGQEHEETETREEKEDRVNEDEP-PAKRKRVALISEGDSSLMKQVAAMASKVGPSVATA 366

Query: 421 AAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSVSSVDANSQIEK 480
           AA AA+  L D           +  + I D  +           S+F+V   +     + 
Sbjct: 367 AAKAALAALCD---------EASCPKEIFDTDD----------YSNFTVDRANGEKDTDM 426

Query: 481 EEVAVEKAISHILDVQMKEAVDKLDRL----EEVDLQMEKEFKQLDQMKSMLFVDQLNLL 486
           EE   EK     L V ++        L     +  +  ++E ++++Q+ + +   QL  L
Sbjct: 427 EEQQEEKDGPQGLPVALRIRASVATALGAAAAQAKILADQEEREMEQLAATVIEQQLKKL 461

[Close]

BLAST of CmaCh09G000170 vs. Swiss-Prot
Match: SWI3C_ARATH (SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 5.2e-34
Identity = 135/488 (27.66%), Postives = 222/488 (45.49%), Query Frame = 1


Query: 65  DPVH-LPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECPSKK 124
           D VH LP +S WF+ N +   E + +P+FF+ +SP+  P  Y   RNAIV  + E P K 
Sbjct: 173 DLVHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKT 232

Query: 125 ITFTDVRKTLVA-DVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHTGE 184
           +T +D +  +   D+    RVF FL+ WG++NY  +  + P    D       +      
Sbjct: 233 LTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNV 292

Query: 185 PGGS--SADSSAPKDASK------RVCSGCKSI---------------CSIACFACD--- 244
           P  +  S DS    D          V S   S+               C   C  C    
Sbjct: 293 PSAALTSIDSLIKFDKPNCRHKGGEVYSSLPSLDGDSPDLDIRIREHLCDSHCNHCSRPL 352

Query: 245 ---------KFDLTLCARCYVRGNYRVGVSSSDFRRVE----INDETRTDWTDKETLHLL 304
                    K D+ LC  C+  G + VG S  DF RV+      D+   +WTD+ETL LL
Sbjct: 353 PTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLL 412

Query: 305 EALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFLGYPDSGNVGGRTVVK------ 364
           EA+  + ++W ++A HVG +++ +C+ HF++LP+ +  L   D+  V G T  +      
Sbjct: 413 EAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLL---DNVEVSGVTNTENPTNGY 472

Query: 365 DH----ASADLTLESTPLTSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAEAAAHAAVV 424
           DH    ++ DL   S   +   I+L P   + NP+MA  AFL+S VG  VA + AH ++ 
Sbjct: 473 DHKGTDSNGDLPGYSEQGSDTEIKL-PFVKSPNPVMALVAFLASAVGPRVAASCAHESLS 532

Query: 425 KLSD----MGFGGDGEIATAV--ARNIGDQGNDVVSCGGSTA-------------RSSFS 483
            LS+       G  G+ A+ +       D  +   S  G+ A             R+  S
Sbjct: 533 VLSEDDRMKSEGMQGKEASLLDGENQQQDGAHKTSSQNGAEAQTPLPQDKVMAAFRAGLS 592

[Close]

BLAST of CmaCh09G000170 vs. Swiss-Prot
Match: SSR2_SCHPO (SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ssr2 PE=1 SV=3)

HSP 1 Score: 144.8 bits (364), Expect = 2.6e-33
Identity = 89/283 (31.45%), Postives = 143/283 (50.53%), Query Frame = 1


Query: 66  PVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECPSKKIT 125
           P+ +PSY+ WF  + IH+ E R  PEFFN +SP K P +YK  R+ ++ ++R  P++ +T
Sbjct: 17  PIIVPSYAGWFDMSKIHDIERRSNPEFFNGKSPLKTPSIYKDYRDFMINSYRLEPNEYLT 76

Query: 126 FTDVRKTLVADVGSIRRVFDFLEAWGLVNY------------------------SPSVLN 185
            T  R+ LV DV +I RV  FLE WGL+NY                        +P V  
Sbjct: 77  VTACRRNLVGDVCAIIRVHAFLEQWGLINYQIDPETRPAFRLPPISGHVQAISNTPIVTQ 136

Query: 186 KPLKWEDRDSKSNSSASHT--------GEPGGSSADSSAPKDASK---------RVCSGC 245
           + L      S    S+S            P  ++ + ++PK+  +         +VC  C
Sbjct: 137 EMLAQHPPPSTVGGSSSQEFVKLEEKHYSPSLNAMEQTSPKEEDEKSDKVPRVDKVCFTC 196

Query: 246 KSICSIACF---ACDKFDLTLCARCYVRGNYRVGVSSSDF---RRVEINDETRTDWTDKE 302
              CS   +      K+D  +C  CY +G +    +SSDF     ++ N +    W+++E
Sbjct: 197 GVNCSQTWYHNLKNKKYD--ICPNCYKQGRFSSSFNSSDFLCMDAIDFNHDEEKPWSNQE 256

[Close]

BLAST of CmaCh09G000170 vs. Swiss-Prot
Match: SWI3D_ARATH (SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1 SV=3)

HSP 1 Score: 130.2 bits (326), Expect = 6.6e-29
Identity = 84/275 (30.55%), Postives = 134/275 (48.73%), Query Frame = 1


Query: 69  LPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECPSKKITFTD 128
           +P++  WFSW  IH  E R LP FFN +   +   VY+ +RN I+  F   P+ +I   D
Sbjct: 147 VPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKD 206

Query: 129 VRKTLVADVGSIRRVFDFLEAWGLVNYSP--------------------SVLNKPLKWED 188
           + +  V D  + + V +FL+ WGL+N+ P                    S+LN   +++ 
Sbjct: 207 LTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNSLYRFQV 266

Query: 189 RDS------KSNSSASHTGEPGGSSADSSAPKDASKRV-------CSGCKSICSIACFAC 248
            ++      K   +A  T  P G   D  A  +  K+        C+ C + CS   + C
Sbjct: 267 DEACPPLVHKPRFTAQAT--PSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHC 326

Query: 249 DK-FDLTLCARCYVRGNYRVGVSSSDFRRVEINDETRT---DWTDKETLHLLEALTHHGD 307
            K  D  LC  C+  G +   +SSSDF  +E  +        WTD+ETL LLEAL    +
Sbjct: 327 PKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKE 386

[Close]

BLAST of CmaCh09G000170 vs. TrEMBL
Match: A0A0A0L3F9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664510 PE=4 SV=1)

HSP 1 Score: 773.5 bits (1996), Expect = 1.6e-220
Identity = 406/501 (81.04%), Postives = 441/501 (88.02%), Query Frame = 1


Query: 1   MAANLPVQDPPTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLPQ 60
           MAAN PVQDPPTDASAKQ  PSPSP LVTPP+KI+TP SDSG+TP+AVPA TPRPEDLPQ
Sbjct: 63  MAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPEDLPQ 122

Query: 61  SASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECP 120
           S SPDP+HLPSYSRWFSWNGIHECEVRFLPEFF+SRSPSKNPRVYKYLRN+IVKNFRECP
Sbjct: 123 STSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 182

Query: 121 SKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHT 180
           SKKITFTD+RKTLVADVGSIRRVFDFLEAWGL+NYSPS L+KPLKW+DRDSKSN+SAS+T
Sbjct: 183 SKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASASNT 242

Query: 181 GEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD 240
           GEPGG SA+SSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD
Sbjct: 243 GEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD 302

Query: 241 FRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQ 300
           FRRVEIND+TRTDWTDKETLHLLEALTH+GDDWKKVAQHVGGRTERECVA FVKLPLGEQ
Sbjct: 303 FRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPLGEQ 362

Query: 301 FLGYPDSGNVGGRTVVKDHASADLTLES-----TPLTSKRIRLSPLADASNPIMAQAAFL 360
           F GYPDS ++     VKD ASA+LTLES     T + +KRIRLSPLADASNPIMAQAAFL
Sbjct: 363 FHGYPDSEHIDNNCTVKDEASANLTLESTGKIGTSIPNKRIRLSPLADASNPIMAQAAFL 422

Query: 361 SSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSV 420
           SSLVGVEVAEAAA AAV+KLS+M FGGDGEIA  VARNIG+QGND  S GGS        
Sbjct: 423 SSLVGVEVAEAAAQAAVIKLSEMDFGGDGEIAIPVARNIGEQGNDAASHGGSCLSRG--- 482

Query: 421 SSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSMLF 480
           S++D           +EKAISHI++VQMKE VDKL+  EE +LQMEK FKQLDQMKSMLF
Sbjct: 483 STMD-----------MEKAISHIVNVQMKEIVDKLNGFEEGELQMEKVFKQLDQMKSMLF 542

Query: 481 VDQLNLLFHKGYI-PTIEDKN 496
           VDQLNLLF+K  I  T+E+K+
Sbjct: 543 VDQLNLLFNKECISTTVEEKS 549

[Close]

BLAST of CmaCh09G000170 vs. TrEMBL
Match: D7UDF2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00670 PE=4 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 1.3e-145
Identity = 288/495 (58.18%), Postives = 364/495 (73.54%), Query Frame = 1


Query: 1   MAANLPVQDP---PTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPED 60
           MAA  P++DP    T+   +QP  S S   + P VK + P + S      +         
Sbjct: 1   MAAQSPIKDPIGASTETLTQQPDSSSS---IIPTVKSEIPVAASASPSVGI--------- 60

Query: 61  LPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFR 120
           +P+++ P+ +++PSYSRWFSWN +HECEVRFLPEFF++RSPSKNPRVYKY RN+I+ +FR
Sbjct: 61  VPRASEPETINIPSYSRWFSWNNVHECEVRFLPEFFDARSPSKNPRVYKYYRNSIILSFR 120

Query: 121 ECPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSA 180
           + PS+K+TFTDVRK LV DVGSIRRVFDFLEAWGL+NYS S L +PLKWE++D+KS  ++
Sbjct: 121 QNPSRKLTFTDVRKILVGDVGSIRRVFDFLEAWGLINYSGSALKQPLKWEEKDNKSGGAS 180

Query: 181 SHTGEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVS 240
           SHTG+ GG + + S PK   +R CSGCKS+CSIACFACDKFDLTLCARCYVRGNYRVGV+
Sbjct: 181 SHTGDAGGGAVE-SIPK---RRWCSGCKSLCSIACFACDKFDLTLCARCYVRGNYRVGVN 240

Query: 241 SSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPL 300
           SSDFRRVEI+++T+  WTDKETLHLLEA+ H+GDDWKKVA+HVGGR E+ECV HF+KL  
Sbjct: 241 SSDFRRVEISEDTKAGWTDKETLHLLEAVLHYGDDWKKVAEHVGGRNEKECVTHFIKLSF 300

Query: 301 GEQFLGYPDSGNVGGR-TVVKDHASADLTLES--TPLTSKRIRLSPLADASNPIMAQAAF 360
           GEQ+LG+  SG+V  + +  KD + A    E+  T   SK++RL+PL+DASNPIMAQAAF
Sbjct: 301 GEQYLGHTSSGDVDNKFSQAKDQSDAGFGQENIGTSSASKKMRLTPLSDASNPIMAQAAF 360

Query: 361 LSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFS 420
           LS+LVGVEVAEAAA AAV  LSD+      E   + A     Q  +V S  G+T  +   
Sbjct: 361 LSALVGVEVAEAAARAAVASLSDVDPRKMKEGLGSFANGARIQDPNVES-NGNTTSNVLE 420

Query: 421 VSSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSML 480
            + VDA S +E+EE+ VE+AIS I +VQMKE  DK+   EE +L MEKE++QL QMK++L
Sbjct: 421 GAYVDAKSLLEREELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEWQQLQQMKNLL 478

Query: 481 FVDQLNLLFHKGYIP 490
           FVDQL LLF K   P
Sbjct: 481 FVDQLTLLFQKAAAP 478

[Close]

BLAST of CmaCh09G000170 vs. TrEMBL
Match: A0A067KP50_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08034 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 2.1e-143
Identity = 290/490 (59.18%), Postives = 361/490 (73.67%), Query Frame = 1


Query: 3   ANLPVQDPPTDASAKQPTPSPS---PTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLP 62
           A+   +DPP  ++A  P+  P    P++V+  V   TPS    + P    A   RP   P
Sbjct: 5   ASASFKDPPGPSNATPPSLKPKLPQPSVVSG-VAATTPSPIKPEVPTPSTA-VQRPPLAP 64

Query: 63  QSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFREC 122
            S   D V +PSYSRWFSWN IHECEVRFLPEFF+SRSPSKNP+ Y Y RN+I+K+FR  
Sbjct: 65  PSPDADVVQIPSYSRWFSWNSIHECEVRFLPEFFDSRSPSKNPKNYMYYRNSIIKHFRHN 124

Query: 123 PSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASH 182
           PS K+TFT+VRKTLV DVGSIRRVFDFLEAWGL+NYSPS LNKPLKWED+DSKS      
Sbjct: 125 PSGKLTFTEVRKTLVGDVGSIRRVFDFLEAWGLINYSPSALNKPLKWEDKDSKSTLQGGA 184

Query: 183 TGEPGGSSADSSAPK-DASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSS 242
            G  GGS ADS+ PK D+SKR+CSGC+S+C+IACF CDK+DLTLCARCYVRGNYRVGVS 
Sbjct: 185 DG--GGSLADSTPPKRDSSKRLCSGCQSVCTIACFVCDKYDLTLCARCYVRGNYRVGVSC 244

Query: 243 SDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLG 302
           SDFRRVEI++E RT+WT+KETL LLEA+TH+GD+WKKVA HV GR+E++CV HF+KLP G
Sbjct: 245 SDFRRVEISEEIRTEWTEKETLQLLEAVTHYGDEWKKVALHVPGRSEKDCVTHFLKLPFG 304

Query: 303 EQFLGYPDSGNVGGR-TVVKDHASADLTLESTPLTS--KRIRLSPLADASNPIMAQAAFL 362
           E+F GY + G    +   +K  +++D   ES   +S  KR+RL+PLADASNPIM+QAAFL
Sbjct: 305 EEFSGYAELGEPCSKYDQIKSCSNSDCGSESIGSSSACKRMRLTPLADASNPIMSQAAFL 364

Query: 363 SSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSV 422
           S+L G EVAEAAA AAV  L+++ +G       +++RN   Q   V +  G T  ++   
Sbjct: 365 SALAGTEVAEAAARAAVTALTEIEYGASKGNIESLSRNTRQQVAGVAA-NGDTNLNALEG 424

Query: 423 SSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSMLF 482
           +S+DANS  E EEV  EKAIS I++VQMKE  DK+   EE+DL MEKE++QL+Q+K++LF
Sbjct: 425 ASLDANSLPENEEVDAEKAISKIIEVQMKEIQDKIVHFEELDLLMEKEWQQLEQIKNLLF 484

Query: 483 VDQLNLLFHK 486
           VDQL LLFHK
Sbjct: 485 VDQLALLFHK 489

[Close]

BLAST of CmaCh09G000170 vs. TrEMBL
Match: B9GPN7_POPTR (SWIRM domain-containing family protein OS=Populus trichocarpa GN=POPTR_0002s00620g PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 4.7e-143
Identity = 282/488 (57.79%), Postives = 355/488 (72.75%), Query Frame = 1


Query: 22  SPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLPQSASPDPVHLPSYSRWFSWNGI 81
           SP+P  + P + + +      + P     S   P+  P S+ PD VH+PSYSRWFSW+ I
Sbjct: 5   SPAPPSLHPKIPLSSTVKPEIQPPTTAAPSPRPPQPPPPSSEPDVVHIPSYSRWFSWDNI 64

Query: 82  HECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECPSKKITFTDVRKTLVADVGSIR 141
           HECEVRFLPEFF+SRSPSKNP VYKY RN+I+  FR+ PS K+TFT++RKTLV DVGSIR
Sbjct: 65  HECEVRFLPEFFDSRSPSKNPSVYKYYRNSIISQFRKNPSAKLTFTEIRKTLVGDVGSIR 124

Query: 142 RVFDFLEAWGLVNYSPSVLNKPLKWED-RDSKSNSSASHTGEPGGSS-----ADSSAPKD 201
           RVFDFL+AWGL+NYSP  LNK LKWED +DS S ++AS  G  GG       A++S  KD
Sbjct: 125 RVFDFLDAWGLINYSP--LNKQLKWEDGKDSSSKTAASPAGGGGGDGGTAGDANASNTKD 184

Query: 202 ASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEINDETRTDWT 261
             KR+CSGCKS+CSIACF CDK+D+TLCARCYVRGNYRVGVSSSDFRRVEI++E RTDWT
Sbjct: 185 NCKRLCSGCKSLCSIACFFCDKYDITLCARCYVRGNYRVGVSSSDFRRVEISEEARTDWT 244

Query: 262 DKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFLGYPDSGNVGGR-T 321
           +KETL LLEA+ H+ DDWKKVAQHVGGR+E++C+ HF+KLP GE F  Y D G+V  +  
Sbjct: 245 EKETLQLLEAVMHYRDDWKKVAQHVGGRSEKDCITHFIKLPFGEVFTDYTDVGDVDSKYN 304

Query: 322 VVK--DHASADLTLESTPLTSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAEAAAHAAV 381
            +K  D   +      +P TSK+IRLSPL DASNPIMAQAAFLS+L G EVAEAAA AAV
Sbjct: 305 QIKDCDDDESGRNGNGSPSTSKKIRLSPLVDASNPIMAQAAFLSALAGTEVAEAAARAAV 364

Query: 382 VKLSDMGFGGDG---EIATAVARNIGDQGNDVVSCGGSTARSSFSVSSVDANSQIEKEEV 441
             L+++ +GG     E  + V +++ D G   V+  G T  S+   + +DANS +EKEE 
Sbjct: 365 TTLTEVEYGGSKGSLEFVSRVTKHL-DSG---VASNGDTNLSASVKACLDANSLLEKEES 424

Query: 442 AVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSMLFVDQLNLLFHKGYIP 498
            VE+AIS I +VQMKE  DK+ R EE+DLQMEKE++QLDQMK++LF DQL++L  +    
Sbjct: 425 DVERAISRITEVQMKEIQDKILRFEELDLQMEKEWQQLDQMKNLLFADQLSVLSKRSVTT 484

[Close]

BLAST of CmaCh09G000170 vs. TrEMBL
Match: A0A059BQ43_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01821 PE=4 SV=1)

HSP 1 Score: 511.1 bits (1315), Expect = 1.5e-141
Identity = 275/489 (56.24%), Postives = 356/489 (72.80%), Query Frame = 1


Query: 2   AANLPVQDPPTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGK-TPAAVPASTPRPEDLPQ 61
           + + P     T  +A    P+P P    PP     PSS+  K T AA  A+ P P   P 
Sbjct: 30  STSAPAAATATATAAAAAAPAPPPVKPEPP-----PSSEPPKPTAAAAAAAPPPPPTEPP 89

Query: 62  SASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECP 121
            A  + +H+PSYSRWFSW+ +HECEVRFLPEFF+ +SPSKNP+VY Y RN++V+ +R  P
Sbjct: 90  VAEAEVIHIPSYSRWFSWSDVHECEVRFLPEFFDGKSPSKNPKVYMYYRNSMVRLYRRNP 149

Query: 122 SKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHT 181
           S+KITFTDVRKTL+ DVGSIRRVFDFLE WGLVNYS S  +KPLKW+D++S   ++    
Sbjct: 150 SRKITFTDVRKTLIGDVGSIRRVFDFLETWGLVNYSGSASSKPLKWDDKESSKTATGGGG 209

Query: 182 GEPGGSSADSSA-PKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSS 241
           G  GG++ DS+   ++ASKR+C+ CKS+C+IACFAC+K+DLTLCARCYVRGNYRVGVSSS
Sbjct: 210 GTGGGNAVDSAGLNREASKRLCNSCKSVCTIACFACEKYDLTLCARCYVRGNYRVGVSSS 269

Query: 242 DFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGE 301
           DFRRVEIN++ + DWT+KETLHLLEAL H+GDDWK+VA HVGGRTE+ECV  F+KLP  E
Sbjct: 270 DFRRVEINEDMKADWTEKETLHLLEALMHYGDDWKRVAHHVGGRTEKECVTKFIKLPFAE 329

Query: 302 QFLGYPDSGNVGGR-TVVKDHASADLTLESTPLT--SKRIRLSPLADASNPIMAQAAFLS 361
           +F+  P SG++ G+   VKD+   +  +ES+ ++  SKR+RL+PLADASNPIMAQAAFLS
Sbjct: 330 EFISDPYSGDIDGKYNTVKDNNDVEFGIESSTMSAPSKRMRLTPLADASNPIMAQAAFLS 389

Query: 362 SLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSVS 421
           +L GVEVAEAAA AAV  LS++ +G + +                VS  G T  ++   +
Sbjct: 390 ALAGVEVAEAAAQAAVTTLSEVEYGVNRDAE--------------VSANGETTLNALEGA 449

Query: 422 SVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSMLFV 481
            +DANS +EKEE+ +E+A+S  ++VQ+KE  DK+   EE+DL MEKE +QL+QMKS LFV
Sbjct: 450 LMDANSVLEKEELDLERAVSDTVEVQLKEIHDKIVHFEELDLLMEKERQQLEQMKSTLFV 499

Query: 482 DQLNLLFHK 486
           DQL+LL HK
Sbjct: 510 DQLSLLLHK 499

[Close]

BLAST of CmaCh09G000170 vs. TAIR10
Match: AT2G33610.1 (AT2G33610.1 switch subunit 3)

HSP 1 Score: 423.3 bits (1087), Expect = 2.1e-118
Identity = 245/485 (50.52%), Postives = 330/485 (68.04%), Query Frame = 1


Query: 17  KQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLPQSASP-DPVHLPSYSRW 76
           K P P  S  ++       TPS     +  A  AS  +   LP S+S  D +H+PSYS W
Sbjct: 4   KAPDPGGSGEILP-----STPSLSETTSGGAAAAS--KSAQLPSSSSDIDNIHVPSYSSW 63

Query: 77  FSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECPSKKITFTDVRKTLVA 136
           FSW  I++CEVR LPEFF+SRS SKNP+ Y YLRN+I+K +R+   +KI+FTDVR+TLV+
Sbjct: 64  FSWTDINDCEVRSLPEFFDSRSSSKNPKFYLYLRNSIIKQYRDDHPRKISFTDVRRTLVS 123

Query: 137 DVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHTGEPGGSSADSSAPKD 196
           DV SIRRVFDFL++WGL+NY+ S   KPLKWE++++   S+     EP      ++  K+
Sbjct: 124 DVVSIRRVFDFLDSWGLINYNSSASAKPLKWEEKEA-GKSAGDAASEP------ATTVKE 183

Query: 197 ASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEINDETRTDWT 256
            +KR C+GCK+ICSIACFACDK+DLTLCARCYVR NYRVG++SS+F+RVEI++E++ +W+
Sbjct: 184 TAKRNCNGCKAICSIACFACDKYDLTLCARCYVRSNYRVGINSSEFKRVEISEESKPEWS 243

Query: 257 DKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFLGYPDSGNVGGRTV 316
           DKE L LLEA+ H+GDDWKKVA HV GRTE++CV+ FVKLP GEQF+   DS +  G  +
Sbjct: 244 DKEILLLLEAVMHYGDDWKKVASHVIGRTEKDCVSQFVKLPFGEQFVKESDSED--GLEM 303

Query: 317 VKDHASADLTLESTPL------TSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAEAAAH 376
                 +D+  ES  +       +KRI+L+PLADASNPIMAQAAFLS+L G  VAEAAA 
Sbjct: 304 FDQIKDSDIP-ESEGIDKDGSSPNKRIKLTPLADASNPIMAQAAFLSALAGTNVAEAAAR 363

Query: 377 AAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSVSSVDANSQIEKEEV 436
           AAV  LSD+ +  D       +R+   Q  +  S  G T R+    +  DA S IEKEE 
Sbjct: 364 AAVRALSDVDYEADKN----ASRDPNRQDANAAS-SGETTRNESERAWADAKSLIEKEEH 423

Query: 437 AVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSMLFVDQLNLLFHKGYIP 495
            VE AI   ++V+MK+  D++   E++DL+ME+  KQL++++++LFVDQLN+ FH     
Sbjct: 424 EVEGAIKETVEVEMKKIRDRIVHFEKLDLEMERSRKQLEEVRNLLFVDQLNIFFHTRKAR 466

[Close]

BLAST of CmaCh09G000170 vs. TAIR10
Match: AT2G47620.1 (AT2G47620.1 SWITCH/sucrose nonfermenting 3A)

HSP 1 Score: 149.1 bits (375), Expect = 7.7e-36
Identity = 130/483 (26.92%), Postives = 210/483 (43.48%), Query Frame = 1


Query: 61  SASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECP 120
           SA  +   +P+ S WF W+ IHE E R   EFF   S ++ P+VYK  R+ I+  FRE  
Sbjct: 7   SAEIELYTIPAQSSWFLWDDIHEIERREFAEFFTESSITRTPKVYKEYRDFIINKFREDT 66

Query: 121 SKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHT 180
            +++TFT VRK LV DV  +++VF FLE WGL+N+S S     LK  D     +++    
Sbjct: 67  CRRLTFTSVRKFLVGDVNLLQKVFLFLEKWGLINFSSS-----LKKNDHLLSVDNAKIEQ 126

Query: 181 GEPGG-----------------------------------SSADSSAPKDASKRVCSGCK 240
           G P G                                   S   S   K     VC+ C 
Sbjct: 127 GTPAGIRVTATPNSLRPITAPPLVEERVETGIKVPPLTSYSDVFSDLKKPDHVLVCAHCG 186

Query: 241 SICSIACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEINDETRTDWTDKETLHLLEA 300
             C    +  +K  + +C +C+  GNY    ++ DF+   I +     WT++E L LLE+
Sbjct: 187 ERCDSPFYQHNKGIVNICEKCFKNGNYGENNTADDFKL--IGNSAAAVWTEEEILLLLES 246

Query: 301 LTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFLGYPDSGNVGGRTVVKD------- 360
           +  HGDDW+ ++Q V  ++  +C++  ++LP GE  +G   SG +    + +D       
Sbjct: 247 VLKHGDDWELISQSVSTKSRLDCISKLIELPFGEFLMG-SASGRLNPSILTEDENTEQVQ 306

Query: 361 ------------HASADLTLESTPLTSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAEA 420
                           D   E  P  +KR R++ +++  + +M Q A ++S VG  VA A
Sbjct: 307 TDGQEHEETETREEKEDRVNEDEP-PAKRKRVALISEGDSSLMKQVAAMASKVGPSVATA 366

Query: 421 AAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSVSSVDANSQIEK 480
           AA AA+  L D           +  + I D  +           S+F+V   +     + 
Sbjct: 367 AAKAALAALCD---------EASCPKEIFDTDD----------YSNFTVDRANGEKDTDM 426

Query: 481 EEVAVEKAISHILDVQMKEAVDKLDRL----EEVDLQMEKEFKQLDQMKSMLFVDQLNLL 486
           EE   EK     L V ++        L     +  +  ++E ++++Q+ + +   QL  L
Sbjct: 427 EEQQEEKDGPQGLPVALRIRASVATALGAAAAQAKILADQEEREMEQLAATVIEQQLKKL 461

[Close]

BLAST of CmaCh09G000170 vs. TAIR10
Match: AT1G21700.1 (AT1G21700.1 SWITCH/sucrose nonfermenting 3C)

HSP 1 Score: 147.1 bits (370), Expect = 2.9e-35
Identity = 135/488 (27.66%), Postives = 222/488 (45.49%), Query Frame = 1


Query: 65  DPVH-LPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECPSKK 124
           D VH LP +S WF+ N +   E + +P+FF+ +SP+  P  Y   RNAIV  + E P K 
Sbjct: 173 DLVHVLPMHSDWFAPNTVDRLERQVVPQFFSGKSPNHTPESYMEFRNAIVSKYVENPEKT 232

Query: 125 ITFTDVRKTLVA-DVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHTGE 184
           +T +D +  +   D+    RVF FL+ WG++NY  +  + P    D       +      
Sbjct: 233 LTISDCQGLVDGVDIEDFARVFRFLDHWGIINYCATAQSHPGPLRDVSDVREDTNGEVNV 292

Query: 185 PGGS--SADSSAPKDASK------RVCSGCKSI---------------CSIACFACD--- 244
           P  +  S DS    D          V S   S+               C   C  C    
Sbjct: 293 PSAALTSIDSLIKFDKPNCRHKGGEVYSSLPSLDGDSPDLDIRIREHLCDSHCNHCSRPL 352

Query: 245 ---------KFDLTLCARCYVRGNYRVGVSSSDFRRVE----INDETRTDWTDKETLHLL 304
                    K D+ LC  C+  G + VG S  DF RV+      D+   +WTD+ETL LL
Sbjct: 353 PTVYFQSQKKGDILLCCDCFHHGRFVVGHSCLDFVRVDPMKFYGDQDGDNWTDQETLLLL 412

Query: 305 EALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQFLGYPDSGNVGGRTVVK------ 364
           EA+  + ++W ++A HVG +++ +C+ HF++LP+ +  L   D+  V G T  +      
Sbjct: 413 EAVELYNENWVQIADHVGSKSKAQCILHFLRLPVEDGLL---DNVEVSGVTNTENPTNGY 472

Query: 365 DH----ASADLTLESTPLTSKRIRLSPLADASNPIMAQAAFLSSLVGVEVAEAAAHAAVV 424
           DH    ++ DL   S   +   I+L P   + NP+MA  AFL+S VG  VA + AH ++ 
Sbjct: 473 DHKGTDSNGDLPGYSEQGSDTEIKL-PFVKSPNPVMALVAFLASAVGPRVAASCAHESLS 532

Query: 425 KLSD----MGFGGDGEIATAV--ARNIGDQGNDVVSCGGSTA-------------RSSFS 483
            LS+       G  G+ A+ +       D  +   S  G+ A             R+  S
Sbjct: 533 VLSEDDRMKSEGMQGKEASLLDGENQQQDGAHKTSSQNGAEAQTPLPQDKVMAAFRAGLS 592

[Close]

BLAST of CmaCh09G000170 vs. TAIR10
Match: AT4G34430.4 (AT4G34430.4 DNA-binding family protein)

HSP 1 Score: 130.2 bits (326), Expect = 3.7e-30
Identity = 84/275 (30.55%), Postives = 134/275 (48.73%), Query Frame = 1


Query: 69  LPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECPSKKITFTD 128
           +P++  WFSW  IH  E R LP FFN +   +   VY+ +RN I+  F   P+ +I   D
Sbjct: 147 VPNHCGWFSWEKIHPLEERSLPSFFNGKLEGRTSEVYREIRNWIMGKFHSNPNIQIELKD 206

Query: 129 VRKTLVADVGSIRRVFDFLEAWGLVNYSP--------------------SVLNKPLKWED 188
           + +  V D  + + V +FL+ WGL+N+ P                    S+LN   +++ 
Sbjct: 207 LTELEVGDSEAKQEVMEFLDYWGLINFHPFPPTDTGSTASDHDDLGDKESLLNSLYRFQV 266

Query: 189 RDS------KSNSSASHTGEPGGSSADSSAPKDASKRV-------CSGCKSICSIACFAC 248
            ++      K   +A  T  P G   D  A  +  K+        C+ C + CS   + C
Sbjct: 267 DEACPPLVHKPRFTAQAT--PSGLFPDPMAADELLKQEGPAVEYHCNSCSADCSRKRYHC 326

Query: 249 DK-FDLTLCARCYVRGNYRVGVSSSDFRRVEINDETRT---DWTDKETLHLLEALTHHGD 307
            K  D  LC  C+  G +   +SSSDF  +E  +        WTD+ETL LLEAL    +
Sbjct: 327 PKQADFDLCTECFNSGKFSSDMSSSDFILMEPAEAPGVGSGKWTDQETLLLLEALEIFKE 386

[Close]

BLAST of CmaCh09G000170 vs. TAIR10
Match: AT4G16420.1 (AT4G16420.1 homolog of yeast ADA2 2B)

HSP 1 Score: 50.8 bits (120), Expect = 2.9e-06
Identity = 33/108 (30.56%), Postives = 49/108 (45.37%), Query Frame = 1


Query: 210 IACFACDKFDLTLCARCYVRGNYRVGVSSSDFRRVEIN---DETRTDWTDKETLHLLEAL 269
           I C  C  FDL  C  C   G            RV  N        DW+  + + LLE L
Sbjct: 60  IKCAVCPDFDL--CIECMSVGAEITPHKCDHPYRVMGNLTFPLICPDWSADDEMLLLEGL 119

Query: 270 THHG-DDWKKVAQHVGGRTERECVAHFVKLPLGEQFLGYPDSGNVGGR 314
             +G  +W +VA+HVG +++ +C+ H+  + L   F   PD  +V G+
Sbjct: 120 EIYGLGNWAEVAEHVGTKSKEQCLEHYRNIYLNSPFFPLPDMSHVAGK 165

[Close]

BLAST of CmaCh09G000170 vs. NCBI nr
Match: gi|659105113|ref|XP_008453025.1| (PREDICTED: SWI/SNF complex subunit SWI3B [Cucumis melo])

HSP 1 Score: 784.6 bits (2025), Expect = 1.0e-223
Identity = 410/499 (82.16%), Postives = 445/499 (89.18%), Query Frame = 1


Query: 1   MAANLPVQDPPTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLPQ 60
           MAAN PVQDPPTDASAKQ  PSPSP LVTPP+KI+TP SDSG+TP+AVPA TPRP+DLPQ
Sbjct: 71  MAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPDDLPQ 130

Query: 61  SASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECP 120
             SPDP+HLPSYSRWFSWNGIHECEVRFLPEFF+SRSPSKNPRVYKYLRN+IVKNFRECP
Sbjct: 131 PTSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 190

Query: 121 SKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHT 180
           SKKITFTD+RKTLVADVGSIRRVFDFLEAWGL+NYSPS L+KPLKWEDRDSKSN+SAS+T
Sbjct: 191 SKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWEDRDSKSNASASNT 250

Query: 181 GEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVG-VSSS 240
           GEPGG SA+SSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVG VSSS
Sbjct: 251 GEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVVSSS 310

Query: 241 DFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGE 300
           DFRRVEIND+TRTDWTDKETLHLLEALTH+GDDWKKVAQHVGGRTERECVAHFVKLPLGE
Sbjct: 311 DFRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAHFVKLPLGE 370

Query: 301 QFLGYPDSGNVGGR-TVVKDHASADLTLEST--PLTSKRIRLSPLADASNPIMAQAAFLS 360
           QF GYPDS ++    TVVKDHASA+LTLEST   + +KRIRLSPLADASNPIMAQAAFLS
Sbjct: 371 QFHGYPDSEHIDNNYTVVKDHASANLTLESTGASIPNKRIRLSPLADASNPIMAQAAFLS 430

Query: 361 SLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSVS 420
           SLVG+EVAEAAA AAV+KLS+M FG DGEIA  +ARN  +QGNDV SC GS  R     S
Sbjct: 431 SLVGIEVAEAAAQAAVIKLSEMDFGRDGEIARPIARNTEEQGNDVASCEGSLLRG----S 490

Query: 421 SVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSMLFV 480
           S+D           +EKAISHI+DVQMKE VDKL+  EE +LQMEK FKQLDQMKSMLFV
Sbjct: 491 SMD-----------MEKAISHIVDVQMKEFVDKLNGFEEGELQMEKVFKQLDQMKSMLFV 550

Query: 481 DQLNLLFHKGYIPTIEDKN 496
           DQLNLLF+KG +PT+EDK+
Sbjct: 551 DQLNLLFNKGCVPTVEDKS 554

[Close]

BLAST of CmaCh09G000170 vs. NCBI nr
Match: gi|449455734|ref|XP_004145606.1| (PREDICTED: SWI/SNF complex subunit SWI3B [Cucumis sativus])

HSP 1 Score: 773.5 bits (1996), Expect = 2.4e-220
Identity = 406/501 (81.04%), Postives = 441/501 (88.02%), Query Frame = 1


Query: 1   MAANLPVQDPPTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLPQ 60
           MAAN PVQDPPTDASAKQ  PSPSP LVTPP+KI+TP SDSG+TP+AVPA TPRPEDLPQ
Sbjct: 1   MAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPEDLPQ 60

Query: 61  SASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECP 120
           S SPDP+HLPSYSRWFSWNGIHECEVRFLPEFF+SRSPSKNPRVYKYLRN+IVKNFRECP
Sbjct: 61  STSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 120

Query: 121 SKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHT 180
           SKKITFTD+RKTLVADVGSIRRVFDFLEAWGL+NYSPS L+KPLKW+DRDSKSN+SAS+T
Sbjct: 121 SKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASASNT 180

Query: 181 GEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD 240
           GEPGG SA+SSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD
Sbjct: 181 GEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD 240

Query: 241 FRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQ 300
           FRRVEIND+TRTDWTDKETLHLLEALTH+GDDWKKVAQHVGGRTERECVA FVKLPLGEQ
Sbjct: 241 FRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPLGEQ 300

Query: 301 FLGYPDSGNVGGRTVVKDHASADLTLES-----TPLTSKRIRLSPLADASNPIMAQAAFL 360
           F GYPDS ++     VKD ASA+LTLES     T + +KRIRLSPLADASNPIMAQAAFL
Sbjct: 301 FHGYPDSEHIDNNCTVKDEASANLTLESTGKIGTSIPNKRIRLSPLADASNPIMAQAAFL 360

Query: 361 SSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSV 420
           SSLVGVEVAEAAA AAV+KLS+M FGGDGEIA  VARNIG+QGND  S GGS        
Sbjct: 361 SSLVGVEVAEAAAQAAVIKLSEMDFGGDGEIAIPVARNIGEQGNDAASHGGSCLSRG--- 420

Query: 421 SSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSMLF 480
           S++D           +EKAISHI++VQMKE VDKL+  EE +LQMEK FKQLDQMKSMLF
Sbjct: 421 STMD-----------MEKAISHIVNVQMKEIVDKLNGFEEGELQMEKVFKQLDQMKSMLF 480

Query: 481 VDQLNLLFHKGYI-PTIEDKN 496
           VDQLNLLF+K  I  T+E+K+
Sbjct: 481 VDQLNLLFNKECISTTVEEKS 487

[Close]

BLAST of CmaCh09G000170 vs. NCBI nr
Match: gi|700200386|gb|KGN55544.1| (hypothetical protein Csa_4G664510 [Cucumis sativus])

HSP 1 Score: 773.5 bits (1996), Expect = 2.4e-220
Identity = 406/501 (81.04%), Postives = 441/501 (88.02%), Query Frame = 1


Query: 1   MAANLPVQDPPTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLPQ 60
           MAAN PVQDPPTDASAKQ  PSPSP LVTPP+KI+TP SDSG+TP+AVPA TPRPEDLPQ
Sbjct: 63  MAANSPVQDPPTDASAKQSAPSPSPALVTPPLKIETPPSDSGQTPSAVPAPTPRPEDLPQ 122

Query: 61  SASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFRECP 120
           S SPDP+HLPSYSRWFSWNGIHECEVRFLPEFF+SRSPSKNPRVYKYLRN+IVKNFRECP
Sbjct: 123 STSPDPIHLPSYSRWFSWNGIHECEVRFLPEFFDSRSPSKNPRVYKYLRNSIVKNFRECP 182

Query: 121 SKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSASHT 180
           SKKITFTD+RKTLVADVGSIRRVFDFLEAWGL+NYSPS L+KPLKW+DRDSKSN+SAS+T
Sbjct: 183 SKKITFTDIRKTLVADVGSIRRVFDFLEAWGLINYSPSALSKPLKWDDRDSKSNASASNT 242

Query: 181 GEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD 240
           GEPGG SA+SSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD
Sbjct: 243 GEPGGGSANSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVSSSD 302

Query: 241 FRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPLGEQ 300
           FRRVEIND+TRTDWTDKETLHLLEALTH+GDDWKKVAQHVGGRTERECVA FVKLPLGEQ
Sbjct: 303 FRRVEINDDTRTDWTDKETLHLLEALTHYGDDWKKVAQHVGGRTERECVAQFVKLPLGEQ 362

Query: 301 FLGYPDSGNVGGRTVVKDHASADLTLES-----TPLTSKRIRLSPLADASNPIMAQAAFL 360
           F GYPDS ++     VKD ASA+LTLES     T + +KRIRLSPLADASNPIMAQAAFL
Sbjct: 363 FHGYPDSEHIDNNCTVKDEASANLTLESTGKIGTSIPNKRIRLSPLADASNPIMAQAAFL 422

Query: 361 SSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFSV 420
           SSLVGVEVAEAAA AAV+KLS+M FGGDGEIA  VARNIG+QGND  S GGS        
Sbjct: 423 SSLVGVEVAEAAAQAAVIKLSEMDFGGDGEIAIPVARNIGEQGNDAASHGGSCLSRG--- 482

Query: 421 SSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSMLF 480
           S++D           +EKAISHI++VQMKE VDKL+  EE +LQMEK FKQLDQMKSMLF
Sbjct: 483 STMD-----------MEKAISHIVNVQMKEIVDKLNGFEEGELQMEKVFKQLDQMKSMLF 542

Query: 481 VDQLNLLFHKGYI-PTIEDKN 496
           VDQLNLLF+K  I  T+E+K+
Sbjct: 543 VDQLNLLFNKECISTTVEEKS 549

[Close]

BLAST of CmaCh09G000170 vs. NCBI nr
Match: gi|1000946931|ref|XP_015580749.1| (PREDICTED: LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3B [Ricinus communis])

HSP 1 Score: 525.8 bits (1353), Expect = 8.6e-146
Identity = 297/499 (59.52%), Postives = 376/499 (75.35%), Query Frame = 1


Query: 1   MAANLP-VQDPPTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPEDLP 60
           MAA+ P  +DPP  +S   P PS +P    PP     P S S ++   V   TPRP   P
Sbjct: 1   MAASTPSFKDPPLPSSTPVP-PSLNPPPPPPPPPPPPPPSSSLRSTNNV---TPRPP--P 60

Query: 61  QSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFREC 120
            S+  D VH+PSYSRWFSWN IHECEVRFLP+FF+SRSPSKNPRVYKY RN+I+K FR+ 
Sbjct: 61  PSSDADVVHIPSYSRWFSWNSIHECEVRFLPDFFDSRSPSKNPRVYKYYRNSIIKCFRQN 120

Query: 121 -PSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSAS 180
            PS KITFT+VRKTLV DVGSIRRVFDFLEAWGL+NY PS L+KPLKWED+D+KS++SA 
Sbjct: 121 NPSVKITFTEVRKTLVGDVGSIRRVFDFLEAWGLINYFPSALSKPLKWEDKDAKSSASA- 180

Query: 181 HTGEPGGSSADSSAPK-DASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVS 240
              +  G+SADS+ PK DA+KR+CSGC+S+CSIACF CDK+DLTLCARCYVRG+YR+GVS
Sbjct: 181 ---DVKGNSADSTPPKRDATKRLCSGCQSVCSIACFVCDKYDLTLCARCYVRGHYRIGVS 240

Query: 241 SSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPL 300
           S+DFRRVEI++E R++WT+KETL LLEA+TH GDDWKKVA HV GR+ER+CV+HF+KLP 
Sbjct: 241 STDFRRVEISEEIRSEWTEKETLQLLEAVTHFGDDWKKVALHVPGRSERDCVSHFIKLPF 300

Query: 301 GEQFLGYPDSGNVGGR-TVVKDHASADLTLES--TPLTSKRIRLSPLADASNPIMAQAAF 360
           GEQF GY D G +  +   VKD + A    ES  +  +SK++RL+PLADASNPIM QAAF
Sbjct: 301 GEQFAGYTDLGELNDKYDQVKDSSDAVCGSESIDSSSSSKKMRLTPLADASNPIMGQAAF 360

Query: 361 LSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFS 420
           LS+L G EVAEAAA AAV  LS+      G    + +R+  +QG  + +  G+  ++   
Sbjct: 361 LSALAGTEVAEAAARAAVTALSEPSKSSLG----SFSRSTREQG-AIDASNGNAEQNGCE 420

Query: 421 VSSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSML 480
            +S+DANS +EKEE+  E+AIS +++VQ+KE  DK+ R E++DL MEKE++QL+Q+K++L
Sbjct: 421 RTSLDANSLLEKEELDAERAISRLVEVQLKEIQDKIIRFEKLDLLMEKEWQQLEQVKNLL 480

Query: 481 FVDQLNLLFHKGYIPTIED 494
           FVDQL LLFHK   P  E+
Sbjct: 481 FVDQLTLLFHKKSAPKTEE 484

[Close]

BLAST of CmaCh09G000170 vs. NCBI nr
Match: gi|225457648|ref|XP_002275451.1| (PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera])

HSP 1 Score: 524.6 bits (1350), Expect = 1.9e-145
Identity = 288/495 (58.18%), Postives = 364/495 (73.54%), Query Frame = 1


Query: 1   MAANLPVQDP---PTDASAKQPTPSPSPTLVTPPVKIDTPSSDSGKTPAAVPASTPRPED 60
           MAA  P++DP    T+   +QP  S S   + P VK + P + S      +         
Sbjct: 1   MAAQSPIKDPIGASTETLTQQPDSSSS---IIPTVKSEIPVAASASPSVGI--------- 60

Query: 61  LPQSASPDPVHLPSYSRWFSWNGIHECEVRFLPEFFNSRSPSKNPRVYKYLRNAIVKNFR 120
           +P+++ P+ +++PSYSRWFSWN +HECEVRFLPEFF++RSPSKNPRVYKY RN+I+ +FR
Sbjct: 61  VPRASEPETINIPSYSRWFSWNNVHECEVRFLPEFFDARSPSKNPRVYKYYRNSIILSFR 120

Query: 121 ECPSKKITFTDVRKTLVADVGSIRRVFDFLEAWGLVNYSPSVLNKPLKWEDRDSKSNSSA 180
           + PS+K+TFTDVRK LV DVGSIRRVFDFLEAWGL+NYS S L +PLKWE++D+KS  ++
Sbjct: 121 QNPSRKLTFTDVRKILVGDVGSIRRVFDFLEAWGLINYSGSALKQPLKWEEKDNKSGGAS 180

Query: 181 SHTGEPGGSSADSSAPKDASKRVCSGCKSICSIACFACDKFDLTLCARCYVRGNYRVGVS 240
           SHTG+ GG + + S PK   +R CSGCKS+CSIACFACDKFDLTLCARCYVRGNYRVGV+
Sbjct: 181 SHTGDAGGGAVE-SIPK---RRWCSGCKSLCSIACFACDKFDLTLCARCYVRGNYRVGVN 240

Query: 241 SSDFRRVEINDETRTDWTDKETLHLLEALTHHGDDWKKVAQHVGGRTERECVAHFVKLPL 300
           SSDFRRVEI+++T+  WTDKETLHLLEA+ H+GDDWKKVA+HVGGR E+ECV HF+KL  
Sbjct: 241 SSDFRRVEISEDTKAGWTDKETLHLLEAVLHYGDDWKKVAEHVGGRNEKECVTHFIKLSF 300

Query: 301 GEQFLGYPDSGNVGGR-TVVKDHASADLTLES--TPLTSKRIRLSPLADASNPIMAQAAF 360
           GEQ+LG+  SG+V  + +  KD + A    E+  T   SK++RL+PL+DASNPIMAQAAF
Sbjct: 301 GEQYLGHTSSGDVDNKFSQAKDQSDAGFGQENIGTSSASKKMRLTPLSDASNPIMAQAAF 360

Query: 361 LSSLVGVEVAEAAAHAAVVKLSDMGFGGDGEIATAVARNIGDQGNDVVSCGGSTARSSFS 420
           LS+LVGVEVAEAAA AAV  LSD+      E   + A     Q  +V S  G+T  +   
Sbjct: 361 LSALVGVEVAEAAARAAVASLSDVDPRKMKEGLGSFANGARIQDPNVES-NGNTTSNVLE 420

Query: 421 VSSVDANSQIEKEEVAVEKAISHILDVQMKEAVDKLDRLEEVDLQMEKEFKQLDQMKSML 480
            + VDA S +E+EE+ VE+AIS I +VQMKE  DK+   EE +L MEKE++QL QMK++L
Sbjct: 421 GAYVDAKSLLEREELDVERAISGITEVQMKEIRDKIVHFEEFELHMEKEWQQLQQMKNLL 478

Query: 481 FVDQLNLLFHKGYIP 490
           FVDQL LLF K   P
Sbjct: 481 FVDQLTLLFQKAAAP 478

The following BLAST results are available for this feature:

BLAST of CmaCh09G000170 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SWI3B_ARATH	3.8e-117	50.52	SWI/SNF complex subunit SWI3B OS=Arabidopsis thaliana GN=SWI3B PE=1 SV=1	[more]
SWI3A_ARATH	1.4e-34	26.92	SWI/SNF complex subunit SWI3A OS=Arabidopsis thaliana GN=SWI3A PE=1 SV=1	[more]
SWI3C_ARATH	5.2e-34	27.66	SWI/SNF complex subunit SWI3C OS=Arabidopsis thaliana GN=SWI3C PE=1 SV=1	[more]
SSR2_SCHPO	2.6e-33	31.45	SWI/SNF and RSC complexes subunit ssr2 OS=Schizosaccharomyces pombe (strain 972 ...	[more]
SWI3D_ARATH	6.6e-29	30.55	SWI/SNF complex subunit SWI3D OS=Arabidopsis thaliana GN=SWI3D PE=1 SV=3	[more]

BLAST of CmaCh09G000170 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L3F9_CUCSA	1.6e-220	81.04	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664510 PE=4 SV=1	[more]
D7UDF2_VITVI	1.3e-145	58.18	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0122g00670 PE=4 SV=...	[more]
A0A067KP50_JATCU	2.1e-143	59.18	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08034 PE=4 SV=1	[more]
B9GPN7_POPTR	4.7e-143	57.79	SWIRM domain-containing family protein OS=Populus trichocarpa GN=POPTR_0002s0062...	[more]
A0A059BQ43_EUCGR	1.5e-141	56.24	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01821 PE=4 SV=1	[more]

BLAST of CmaCh09G000170 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33610.1	2.1e-118	50.52	switch subunit 3	[more]
AT2G47620.1	7.7e-36	26.92	SWITCH/sucrose nonfermenting 3A	[more]
AT1G21700.1	2.9e-35	27.66	SWITCH/sucrose nonfermenting 3C	[more]
AT4G34430.4	3.7e-30	30.55	DNA-binding family protein	[more]
AT4G16420.1	2.9e-06	30.56	homolog of yeast ADA2 2B	[more]

BLAST of CmaCh09G000170 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659105113\|ref\|XP_008453025.1\|	1.0e-223	82.16	PREDICTED: SWI/SNF complex subunit SWI3B [Cucumis melo]	[more]
gi\|449455734\|ref\|XP_004145606.1\|	2.4e-220	81.04	PREDICTED: SWI/SNF complex subunit SWI3B [Cucumis sativus]	[more]
gi\|700200386\|gb\|KGN55544.1\|	2.4e-220	81.04	hypothetical protein Csa_4G664510 [Cucumis sativus]	[more]
gi\|1000946931\|ref\|XP_015580749.1\|	8.6e-146	59.52	PREDICTED: LOW QUALITY PROTEIN: SWI/SNF complex subunit SWI3B [Ricinus communis]	[more]
gi\|225457648\|ref\|XP_002275451.1\|	1.9e-145	58.18	PREDICTED: SWI/SNF complex subunit SWI3B [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR007526	SWIRM
IPR009057	Homeobox-like_sf
IPR011991	Winged helix-turn-helix DNA-binding domain
IPR017884	SANT_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G000170.1	CmaCh09G000170.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 251..295 score: 8.6
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 250..298 score: 8.0
IPR007526	SWIRM domain	PFAM	PF04433	SWIRM	coord: 70..155 score: 5.5
IPR007526	SWIRM domain	PROFILE	PS50934	SWIRM	coord: 67..164 score: 2
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 250..292 score: 1.
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 66..168 score: 3.31E-27coord: 251..299 score: 2.92
IPR011991	Winged helix-turn-helix DNA-binding domain	GENE3D	G3DSA:1.10.10.10		coord: 66..164 score: 2.2
IPR017884	SANT domain	PROFILE	PS51293	SANT	coord: 249..300 score: 19
None	No IPR available	unknown	Coil	Coil	coord: 443..470 scor
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 10..491 score: 9.3E
None	No IPR available	PANTHER	PTHR12802:SF44	SWI/SNF COMPLEX SUBUNIT SWI3B	coord: 10..491 score: 9.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh09G000170	Cucsa.272450	Cucumber (Gy14) v1	cgycmaB0751
CmaCh09G000170	Cla023482	Watermelon (97103) v1	cmawmB039
CmaCh09G000170	Csa4G664510	Cucumber (Chinese Long) v2	cmacuB024
CmaCh09G000170	MELO3C017062	Melon (DHL92) v3.5.1	cmameB037
CmaCh09G000170	ClCG11G019090	Watermelon (Charleston Gray)	cmawcgB017
CmaCh09G000170	CSPI04G27290	Wild cucumber (PI 183967)	cmacpiB025
CmaCh09G000170	CmoCh09G000160	Cucurbita moschata (Rifu)	cmacmoB027
CmaCh09G000170	Lsi04G024260	Bottle gourd (USVL1VR-Ls)	cmalsiB028
CmaCh09G000170	MELO3C017062.2	Melon (DHL92) v3.6.1	cmamedB036
CmaCh09G000170	CsaV3_4G037680	Cucumber (Chinese Long) v3	cmacucB0031
CmaCh09G000170	Cla97C11G225210	Watermelon (97103) v2	cmawmbB022
CmaCh09G000170	Bhi09G002308	Wax gourd	cmawgoB0041
CmaCh09G000170	CsGy4G025600	Cucumber (Gy14) v2	cgybcmaB469
CmaCh09G000170	Carg08599	Silver-seed gourd	carcmaB0134

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh09G000170	Cucurbita pepo (Zucchini)	cmacpeB045
CmaCh09G000170	Silver-seed gourd	carcmaB0501
CmaCh09G000170	Wax gourd	cmawgoB0029
CmaCh09G000170	Cucurbita maxima (Rimu)	cmacmaB051
CmaCh09G000170	Cucurbita moschata (Rifu)	cmacmoB047