CmaCh09G000020 (gene) Cucurbita maxima (Rimu)

NameCmaCh09G000020
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr09 : 6070 .. 6756 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGTCATTACCATCATTTCAAGTAAAACGAACCGGTTCGGTTCGGGTTTACAGAGATCACATTGAACCTTCAAGGCTTCGGTTCGGTTGAACTAAACTGAACCAACTCAAATGGTATGTTTTTTTGCGTTTGGTTTTAGGGTTTCTCCACTTCGGGAACTTCGACTGTCAGCCAGGTCATCTCTCTCTGTCTGTCTGTCTTTCGCATTTGCCGACCCTATCACACTCCGCCACTCTCGCTCAGCCACCGTCGCCGTTGACTACTTACGCCATCGCTTCCTATTGTGAATTCAAATATATTGGATAGCCTTTTTCTTTTTTCTTTTTCTTTATCAGTTACTGTTTTCAGCGTCGAGAGAGCAAATCTGTATGCTGTCAGATTTTGCTGTGAATGGAGAAATGCTACGGTTGATATGGGCCTGATTTGCATTAGTCCTTGTATGGATGAAGCTGGCGGTAATGGATCTCCTTCATCTTCTCTTTATGTGAAAGTTAAAACGATAGAAGCATGTAGCCTTTCTTTTTAATCTCTATCATTTTACCAACTAAGACGATTCCTTATAAACTTATACTTGTCAGGAGGAGGAGGAGGTGGAGGAGGAGGAGGTGGAGGAAGAGGAGGTGGAGGAGGAGGGCCACGAGTCTCGTAGGAAGAGGCAGCTTAGGACACGAAAAGATAAGTAG

mRNA sequence

ATGATGGTCATTACCATCATTTCAAGTAAAACGAACCGGTTCGGTTCGGGGTTTCTCCACTTCGGGAACTTCGACTGTCAGCCAGGTCATCTCTCTCTGTCTGTCTGTCTTTCGCATTTGCCGACCCTATCACACTCCGCCACTCTCGCTCAGCCACCGTCGCCGTTGACTACTTACGCCATCGCTTCCTATTTTACTGTTTTCAGCGTCGAGAGAGCAAATCTGTATGCTGTCAGATTTTGCTGTGAATGGAGAAATGCTACGGAGGAGGAGGAGGTGGAGGAGGAGGAGGTGGAGGAAGAGGAGGTGGAGGAGGAGGGCCACGAGTCTCGTAGGAAGAGGCAGCTTAGGACACGAAAAGATAAGTAG

Coding sequence (CDS)

ATGATGGTCATTACCATCATTTCAAGTAAAACGAACCGGTTCGGTTCGGGGTTTCTCCACTTCGGGAACTTCGACTGTCAGCCAGGTCATCTCTCTCTGTCTGTCTGTCTTTCGCATTTGCCGACCCTATCACACTCCGCCACTCTCGCTCAGCCACCGTCGCCGTTGACTACTTACGCCATCGCTTCCTATTTTACTGTTTTCAGCGTCGAGAGAGCAAATCTGTATGCTGTCAGATTTTGCTGTGAATGGAGAAATGCTACGGAGGAGGAGGAGGTGGAGGAGGAGGAGGTGGAGGAAGAGGAGGTGGAGGAGGAGGGCCACGAGTCTCGTAGGAAGAGGCAGCTTAGGACACGAAAAGATAAGTAG

Protein sequence

MMVITIISSKTNRFGSGFLHFGNFDCQPGHLSLSVCLSHLPTLSHSATLAQPPSPLTTYAIASYFTVFSVERANLYAVRFCCEWRNATEEEEVEEEEVEEEEVEEEGHESRRKRQLRTRKDK
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G000020.1CmaCh09G000020.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 84..113
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh09G000020Cucurbita maxima (Rimu)cmacmaB051
CmaCh09G000020Cucurbita moschata (Rifu)cmacmoB027
CmaCh09G000020Cucurbita moschata (Rifu)cmacmoB047
CmaCh09G000020Cucurbita pepo (Zucchini)cmacpeB024
CmaCh09G000020Cucurbita pepo (Zucchini)cmacpeB045
CmaCh09G000020Silver-seed gourdcarcmaB0134
CmaCh09G000020Silver-seed gourdcarcmaB0501