CmaCh08G012870 (gene) Cucurbita maxima (Rimu)

NameCmaCh08G012870
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionPeroxidase 72
LocationCma_Chr08 : 7797350 .. 7798908 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATACTGTTAGACTAATGTTGGAGATGTTCTTTACTTGAGAAATAATGAATTGGGCTGTTTTTAGATTTCCTTGGAGGTATTATGAATCACATAAGCTCCTTTACTATGGTAGAACTATCTGGTCTTCAGCTGGTGCATCTGCCATTTAAGTTTTGAAATGAAGAAACTAGGCCCCCTCTGCCTTGAAGCTCTGAGGCAGAGAGCAGCCTTGTAAGATGCAGAAACCACAGATGGGATGAGCAATGTTTCAATGGCGTTTGCGTTGGCTGCTCTCTCAACGTGTGCCCTTGTACGATCTATACATTGGCTTAGTTAATAACATACCGATATCATTGTATCATATTGCTAAGATCTCTGTATTCCTCATAAACGTGTATGTACTTATAAATTAATCTCTCAGCATATACCGTCGGTTCTTTTGTTTTGTTACATCTTAAAAACTGGAGTGGAAGAGGATCGGTGTACCTTCTTTTGAAACTGTGATTCATTCACTTGAAATACTAGTTGACAACAGTACCTTCTCCAATTCAGCAAGTTATCTAATCTTTGGTTCATTTTTTGGTGCTCTTAGATATTGAAATTTAACATAATCTAGCTTAGCTCGGAGTACGACAGTTAGTTCGGATCACGGTCTGTGTTCCAACGGGTGGTTTGAGGGATCCCATTTTCACCATTGACTGCTTGAAGTCTTCAAAGAAAGCAATCGGGTCCACAGCATAGGTTTCTACTATTTCTCTAGTTTGGTAATCACTAGTTACAAGAACTTGATCAGACTGGAGCAACCCTTCTCCGGTGAGAAGATTGATGTAATACTGGTTGTCGAACGTCACTGGGGTTACAAGGTCGAGATGTGCCAGTGTCGAGCTGTTACCAGATTCTGAGCAGAGCTGTTTTAGTGACTCGATGAACTCTTGGTTTGCTCCTTCATTAGGGCTGTTCCCGTTATTCTGCAGCCTAGAACTGAATGAAACACATCGTGCTCGTCCCAGCGTGTGCGCCCCTTCATATATAGTGAAACATTTAGTCGAAAAGTGGTAAGAAAAGTCGAAGAAAGATGAGAACCGAACCAAATCACCTGAGAGAGCAACCATATCTCTGAGAGAAAGGCCAAGGTTCTGGAACTTTGAAACTAGAGTGGCCACAGTGGAGTTAGGCGCAGGAATGTTGTTTTGTGCTGCTGTTTTGCTGGCGCTCAGGCTGTCTCCTCTTCCAAATTCCACTTTCCACACAGGTCCTCCAGACTGCAAATTGTTTGGAAAAAACAGTATCAGAATAATGCCTTTTGTAACTATTTTGACTTCAGTTGTCTTAGAATTCTATGGTCAATAAACGCACAAGAACGACAGAGTCTCGGGCCGCAATTGCAAGAATGTCAGCACATGAAACTGTCTGTGGACAAACAGATTCGATCTCAGATTTTATGGCATCAATCACTTCAAATCCTCTCAGCGAGTTTGCATTTGGAGCTGCAGTTTTCTCTCCGACAAAGTTGTCGTTATCGTCCAACAACACTGAAGCATCGCACCCCTACATGAAACACGTTCACATTCATTAG

mRNA sequence

ATGCATACTAATTCTATGGTCAATAAACGCACAAGAACGACAGAGTCTCGGGCCGCAATTGCAAGAATGTCAGCACATGAAACTGTCTGTGGACAAACAGATTCGATCTCAGATTTTATGGCATCAATCACTTCAAATCCTCTCAGCGAGTTTGCATTTGGAGCTGCAGTTTTCTCTCCGACAAAGTTGTCGTTATCGTCCAACAACACTGAAGCATCGCACCCCTACATGAAACACGTTCACATTCATTAG

Coding sequence (CDS)

ATGCATACTAATTCTATGGTCAATAAACGCACAAGAACGACAGAGTCTCGGGCCGCAATTGCAAGAATGTCAGCACATGAAACTGTCTGTGGACAAACAGATTCGATCTCAGATTTTATGGCATCAATCACTTCAAATCCTCTCAGCGAGTTTGCATTTGGAGCTGCAGTTTTCTCTCCGACAAAGTTGTCGTTATCGTCCAACAACACTGAAGCATCGCACCCCTACATGAAACACGTTCACATTCATTAG

Protein sequence

MHTNSMVNKRTRTTESRAAIARMSAHETVCGQTDSISDFMASITSNPLSEFAFGAAVFSPTKLSLSSNNTEASHPYMKHVHIH
BLAST of CmaCh08G012870 vs. TrEMBL
Match: A0A0P0Y687_ORYSJ (Os12g0111750 protein OS=Oryza sativa subsp. japonica GN=Os12g0111750 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.9e-08
Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 1

Query: 23 MSAHETVCGQTDSISDFMASITSNPLSEFAFGAAVFSPTKLSLSSNNTEASHP 76
          MSAHET CGQ  SI   M SITSNP  E  FGAAVFSP  + +SS++TE S P
Sbjct: 1  MSAHETTCGQIPSICALMLSITSNPRRELLFGAAVFSPVNVGVSSSSTEPSQP 53

BLAST of CmaCh08G012870 vs. TrEMBL
Match: A0A0A9I2W7_ARUDO (Peroxidase 72 OS=Arundo donax PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 8.8e-07
Identity = 39/68 (57.35%), Postives = 43/68 (63.24%), Query Frame = 1

Query: 11  TRTTESRAAIARMSAHETVCGQTDSISDFMASITSNPLSEFAFGAAVFSPTKLSLSSNNT 70
           TRT ESRAA ARMSA ETV GQ  S +  + S TSNPL EF  G   FS T L L S +T
Sbjct: 38  TRTVESRAARARMSAQETVPGQAASRAALIWSTTSNPLREFLLGLDPFSLTMLLLLSRST 97

Query: 71  EASHPYMK 79
           +AS P  K
Sbjct: 98  DASQPLTK 105

BLAST of CmaCh08G012870 vs. TrEMBL
Match: I3S266_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-06
Identity = 38/73 (52.05%), Postives = 45/73 (61.64%), Query Frame = 1

Query: 7   VNKRTRTTESRAAIARMSAHETVCGQTDSISDFMASITSNPLSEFAFGAAVFSPTK-LSL 66
           V   +R   S  A AR+SAHETV  Q  S    M SITS PL+EF FGAA FSPTK + +
Sbjct: 74  VGPPSRFIPSLVASARISAHETVLLQEASTLVLMVSITSKPLAEFLFGAAFFSPTKVVPM 133

Query: 67  SSNNTEASHPYMK 79
           SSN  + S P+ K
Sbjct: 134 SSNKIDPSQPFTK 146

BLAST of CmaCh08G012870 vs. TrEMBL
Match: C4J3N2_MAIZE (Uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 4.4e-06
Identity = 40/69 (57.97%), Postives = 43/69 (62.32%), Query Frame = 1

Query: 11  TRTTESRAAIARMSAHETVCGQTDSISDFMASITSNPLSEFAFGAAVFSPTKL-SLSSNN 70
           +R T SRAA ARMSA ETV  Q  S    MAS+TS P SE A G A FSP KL   SS+ 
Sbjct: 72  SRLTASRAARARMSAQETVALQDASTWALMASMTSYPRSELALGPAFFSPVKLPGTSSSK 131

Query: 71  TEASHPYMK 79
           TEAS P  K
Sbjct: 132 TEASQPLTK 140

BLAST of CmaCh08G012870 vs. TrEMBL
Match: A0A0E0C0B2_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.7e-06
Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 1

Query: 13 TTESRAAIARMSAHETVCGQTDSISDFMASITSNPLSEFAFGAAVFSPTKLSLSSNNTEA 72
          T ESRAA ARMSA ETV GQ  S +  ++S TS PL EF  G   FS   + L S +T+A
Sbjct: 19 TVESRAARARMSAQETVPGQAASRAALISSTTSKPLREFRLGFDPFSLMMVVLLSRSTDA 78

Query: 73 SHPY 77
          SHPY
Sbjct: 79 SHPY 82

BLAST of CmaCh08G012870 vs. NCBI nr
Match: gi|937940654|dbj|BAT15566.1| (Os12g0111750 [Oryza sativa Japonica Group])

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-07
Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 1

Query: 23 MSAHETVCGQTDSISDFMASITSNPLSEFAFGAAVFSPTKLSLSSNNTEASHP 76
          MSAHET CGQ  SI   M SITSNP  E  FGAAVFSP  + +SS++TE S P
Sbjct: 1  MSAHETTCGQIPSICALMLSITSNPRRELLFGAAVFSPVNVGVSSSSTEPSQP 53

BLAST of CmaCh08G012870 vs. NCBI nr
Match: gi|388492584|gb|AFK34358.1| (unknown [Lotus japonicus])

HSP 1 Score: 58.9 bits (141), Expect = 4.8e-06
Identity = 38/73 (52.05%), Postives = 45/73 (61.64%), Query Frame = 1

Query: 7   VNKRTRTTESRAAIARMSAHETVCGQTDSISDFMASITSNPLSEFAFGAAVFSPTK-LSL 66
           V   +R   S  A AR+SAHETV  Q  S    M SITS PL+EF FGAA FSPTK + +
Sbjct: 74  VGPPSRFIPSLVASARISAHETVLLQEASTLVLMVSITSKPLAEFLFGAAFFSPTKVVPM 133

Query: 67  SSNNTEASHPYMK 79
           SSN  + S P+ K
Sbjct: 134 SSNKIDPSQPFTK 146

BLAST of CmaCh08G012870 vs. NCBI nr
Match: gi|238009494|gb|ACR35782.1| (unknown [Zea mays])

HSP 1 Score: 58.5 bits (140), Expect = 6.3e-06
Identity = 40/69 (57.97%), Postives = 43/69 (62.32%), Query Frame = 1

Query: 11  TRTTESRAAIARMSAHETVCGQTDSISDFMASITSNPLSEFAFGAAVFSPTKL-SLSSNN 70
           +R T SRAA ARMSA ETV  Q  S    MAS+TS P SE A G A FSP KL   SS+ 
Sbjct: 72  SRLTASRAARARMSAQETVALQDASTWALMASMTSYPRSELALGPAFFSPVKLPGTSSSK 131

Query: 71  TEASHPYMK 79
           TEAS P  K
Sbjct: 132 TEASQPLTK 140

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0P0Y687_ORYSJ7.9e-0862.26Os12g0111750 protein OS=Oryza sativa subsp. japonica GN=Os12g0111750 PE=4 SV=1[more]
A0A0A9I2W7_ARUDO8.8e-0757.35Peroxidase 72 OS=Arundo donax PE=4 SV=1[more]
I3S266_LOTJA3.3e-0652.05Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
C4J3N2_MAIZE4.4e-0657.97Uncharacterized protein OS=Zea mays PE=2 SV=1[more]
A0A0E0C0B2_9ORYZ9.7e-0654.69Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|937940654|dbj|BAT15566.1|1.1e-0762.26Os12g0111750 [Oryza sativa Japonica Group][more]
gi|388492584|gb|AFK34358.1|4.8e-0652.05unknown [Lotus japonicus][more]
gi|238009494|gb|ACR35782.1|6.3e-0657.97unknown [Zea mays][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G012870.1CmaCh08G012870.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh08G012870Cucurbita pepo (Zucchini)cmacpeB895
CmaCh08G012870Cucurbita pepo (Zucchini)cmacpeB915
CmaCh08G012870Cucurbita pepo (Zucchini)cmacpeB928
CmaCh08G012870Cucurbita pepo (Zucchini)cmacpeB931
CmaCh08G012870Bottle gourd (USVL1VR-Ls)cmalsiB811
CmaCh08G012870Bottle gourd (USVL1VR-Ls)cmalsiB832
CmaCh08G012870Cucumber (Gy14) v2cgybcmaB454
CmaCh08G012870Cucumber (Gy14) v2cgybcmaB877
CmaCh08G012870Melon (DHL92) v3.6.1cmamedB914
CmaCh08G012870Melon (DHL92) v3.6.1cmamedB950
CmaCh08G012870Silver-seed gourdcarcmaB0096
CmaCh08G012870Silver-seed gourdcarcmaB0394
CmaCh08G012870Silver-seed gourdcarcmaB0988
CmaCh08G012870Cucumber (Chinese Long) v3cmacucB1049
CmaCh08G012870Cucumber (Chinese Long) v3cmacucB1078
CmaCh08G012870Watermelon (97103) v2cmawmbB911
CmaCh08G012870Watermelon (97103) v2cmawmbB914
CmaCh08G012870Watermelon (97103) v2cmawmbB921
CmaCh08G012870Wax gourdcmawgoB1089
CmaCh08G012870Wax gourdcmawgoB1091
CmaCh08G012870Wax gourdcmawgoB1107
CmaCh08G012870Cucurbita maxima (Rimu)cmacmaB298
CmaCh08G012870Cucurbita maxima (Rimu)cmacmaB373
CmaCh08G012870Cucurbita maxima (Rimu)cmacmaB554
CmaCh08G012870Cucumber (Gy14) v1cgycmaB0689
CmaCh08G012870Cucumber (Gy14) v1cgycmaB0731
CmaCh08G012870Cucurbita moschata (Rifu)cmacmoB883
CmaCh08G012870Cucurbita moschata (Rifu)cmacmoB887
CmaCh08G012870Cucurbita moschata (Rifu)cmacmoB912
CmaCh08G012870Wild cucumber (PI 183967)cmacpiB903
CmaCh08G012870Wild cucumber (PI 183967)cmacpiB929
CmaCh08G012870Cucumber (Chinese Long) v2cmacuB885
CmaCh08G012870Cucumber (Chinese Long) v2cmacuB909
CmaCh08G012870Melon (DHL92) v3.5.1cmameB816
CmaCh08G012870Melon (DHL92) v3.5.1cmameB850
CmaCh08G012870Watermelon (Charleston Gray)cmawcgB796
CmaCh08G012870Watermelon (Charleston Gray)cmawcgB804
CmaCh08G012870Watermelon (97103) v1cmawmB869
CmaCh08G012870Watermelon (97103) v1cmawmB878