CmaCh08G012870 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATACTGTTAGACTAATGTTGGAGATGTTCTTTACTTGAGAAATAATGAATTGGGCTGTTTTTAGATTTCCTTGGAGGTATTATGAATCACATAAGCTCCTTTACTATGGTAGAACTATCTGGTCTTCAGCTGGTGCATCTGCCATTTAAGTTTTGAAATGAAGAAACTAGGCCCCCTCTGCCTTGAAGCTCTGAGGCAGAGAGCAGCCTTGTAAGATGCAGAAACCACAGATGGGATGAGCAATGTTTCAATGGCGTTTGCGTTGGCTGCTCTCTCAACGTGTGCCCTTGTACGATCTATACATTGGCTTAGTTAATAACATACCGATATCATTGTATCATATTGCTAAGATCTCTGTATTCCTCATAAACGTGTATGTACTTATAAATTAATCTCTCAGCATATACCGTCGGTTCTTTTGTTTTGTTACATCTTAAAAACTGGAGTGGAAGAGGATCGGTGTACCTTCTTTTGAAACTGTGATTCATTCACTTGAAATACTAGTTGACAACAGTACCTTCTCCAATTCAGCAAGTTATCTAATCTTTGGTTCATTTTTTGGTGCTCTTAGATATTGAAATTTAACATAATCTAGCTTAGCTCGGAGTACGACAGTTAGTTCGGATCACGGTCTGTGTTCCAACGGGTGGTTTGAGGGATCCCATTTTCACCATTGACTGCTTGAAGTCTTCAAAGAAAGCAATCGGGTCCACAGCATAGGTTTCTACTATTTCTCTAGTTTGGTAATCACTAGTTACAAGAACTTGATCAGACTGGAGCAACCCTTCTCCGGTGAGAAGATTGATGTAATACTGGTTGTCGAACGTCACTGGGGTTACAAGGTCGAGATGTGCCAGTGTCGAGCTGTTACCAGATTCTGAGCAGAGCTGTTTTAGTGACTCGATGAACTCTTGGTTTGCTCCTTCATTAGGGCTGTTCCCGTTATTCTGCAGCCTAGAACTGAATGAAACACATCGTGCTCGTCCCAGCGTGTGCGCCCCTTCATATATAGTGAAACATTTAGTCGAAAAGTGGTAAGAAAAGTCGAAGAAAGATGAGAACCGAACCAAATCACCTGAGAGAGCAACCATATCTCTGAGAGAAAGGCCAAGGTTCTGGAACTTTGAAACTAGAGTGGCCACAGTGGAGTTAGGCGCAGGAATGTTGTTTTGTGCTGCTGTTTTGCTGGCGCTCAGGCTGTCTCCTCTTCCAAATTCCACTTTCCACACAGGTCCTCCAGACTGCAAATTGTTTGGAAAAAACAGTATCAGAATAATGCCTTTTGTAACTATTTTGACTTCAGTTGTCTTAGAATTCTATGGTCAATAAACGCACAAGAACGACAGAGTCTCGGGCCGCAATTGCAAGAATGTCAGCACATGAAACTGTCTGTGGACAAACAGATTCGATCTCAGATTTTATGGCATCAATCACTTCAAATCCTCTCAGCGAGTTTGCATTTGGAGCTGCAGTTTTCTCTCCGACAAAGTTGTCGTTATCGTCCAACAACACTGAAGCATCGCACCCCTACATGAAACACGTTCACATTCATTAG ATGCATACTAATTCTATGGTCAATAAACGCACAAGAACGACAGAGTCTCGGGCCGCAATTGCAAGAATGTCAGCACATGAAACTGTCTGTGGACAAACAGATTCGATCTCAGATTTTATGGCATCAATCACTTCAAATCCTCTCAGCGAGTTTGCATTTGGAGCTGCAGTTTTCTCTCCGACAAAGTTGTCGTTATCGTCCAACAACACTGAAGCATCGCACCCCTACATGAAACACGTTCACATTCATTAG ATGCATACTAATTCTATGGTCAATAAACGCACAAGAACGACAGAGTCTCGGGCCGCAATTGCAAGAATGTCAGCACATGAAACTGTCTGTGGACAAACAGATTCGATCTCAGATTTTATGGCATCAATCACTTCAAATCCTCTCAGCGAGTTTGCATTTGGAGCTGCAGTTTTCTCTCCGACAAAGTTGTCGTTATCGTCCAACAACACTGAAGCATCGCACCCCTACATGAAACACGTTCACATTCATTAG MHTNSMVNKRTRTTESRAAIARMSAHETVCGQTDSISDFMASITSNPLSEFAFGAAVFSPTKLSLSSNNTEASHPYMKHVHIH
BLAST of CmaCh08G012870 vs. TrEMBL
Match: A0A0P0Y687_ORYSJ (Os12g0111750 protein OS=Oryza sativa subsp. japonica GN=Os12g0111750 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 7.9e-08 Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 1
BLAST of CmaCh08G012870 vs. TrEMBL
Match: A0A0A9I2W7_ARUDO (Peroxidase 72 OS=Arundo donax PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 8.8e-07 Identity = 39/68 (57.35%), Postives = 43/68 (63.24%), Query Frame = 1
BLAST of CmaCh08G012870 vs. TrEMBL
Match: I3S266_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 3.3e-06 Identity = 38/73 (52.05%), Postives = 45/73 (61.64%), Query Frame = 1
BLAST of CmaCh08G012870 vs. TrEMBL
Match: C4J3N2_MAIZE (Uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 4.4e-06 Identity = 40/69 (57.97%), Postives = 43/69 (62.32%), Query Frame = 1
BLAST of CmaCh08G012870 vs. TrEMBL
Match: A0A0E0C0B2_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 9.7e-06 Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = 1
BLAST of CmaCh08G012870 vs. NCBI nr
Match: gi|937940654|dbj|BAT15566.1| (Os12g0111750 [Oryza sativa Japonica Group]) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-07 Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 1
BLAST of CmaCh08G012870 vs. NCBI nr
Match: gi|388492584|gb|AFK34358.1| (unknown [Lotus japonicus]) HSP 1 Score: 58.9 bits (141), Expect = 4.8e-06 Identity = 38/73 (52.05%), Postives = 45/73 (61.64%), Query Frame = 1
BLAST of CmaCh08G012870 vs. NCBI nr
Match: gi|238009494|gb|ACR35782.1| (unknown [Zea mays]) HSP 1 Score: 58.5 bits (140), Expect = 6.3e-06 Identity = 40/69 (57.97%), Postives = 43/69 (62.32%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |