CmaCh08G011330 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCATCTCTGGTTGTCTTTTTGGTGGAGCCAACAGGTTTGCATCTGTGTTGGAATCCTCTGTTTTTACCATGTACTGTATCAAAGAGTAAGTTATGGATTCTACGACTTATTTGGAGCAACTAGCCTTTTTCTGGATCAACTAGACTTTTTCAATGAACAAAGTTTGGAAACCGTATTTTTTTAGTACATGACATGTCATAAAGGTTTGATATATATCCTACTCTTTTTGGTTGAATGTGGTGTAAATTAATATTGATTGATTAAACAAACTTATGTAAATATAAACACTTGGTTTCAATCGAATGATCCAGCAGGTAGATTTCCTACGTCGATCCCAACCCCGGCCACTCAATCCAAGACATATACGAGCAGATTTTCGCCGAGCCATGGTCCGACGCCTCTCAATCCAAAGATCCTCTTCCGCTGGCAAGGATGCGAGGCTTCGCGCAGAACGCAGAGCAGATCGAAAAAGGAATGTCGGCGACGGTGATGAACGGATTGAAGCCAGAGGTGGTGGCGGTGTTCAAAGAGTTGGTGATGGAGTTGGGAGTTTGTGCACTCGGCACTGAGTAG ATGGCCATCTCTGGTTGTCTTTTTGGTGGAGCCAACAGGTTTGCATCTGTGTTGGAATCCTCTATTTCCTACGTCGATCCCAACCCCGGCCACTCAATCCAAGACATATACGAGCAGATTTTCGCCGAGCCATGGTCCGACGCCTCTCAATCCAAAGATCCTCTTCCGCTGGCAAGGATGCGAGGCTTCGCGCAGAACGCAGAGCAGATCGAAAAAGGAATGTCGGCGACGGTGATGAACGGATTGAAGCCAGAGGTGGTGGCGGTGTTCAAAGAGTTGGTGATGGAGTTGGGAGTTTGTGCACTCGGCACTGAGTAG ATGGCCATCTCTGGTTGTCTTTTTGGTGGAGCCAACAGGTTTGCATCTGTGTTGGAATCCTCTATTTCCTACGTCGATCCCAACCCCGGCCACTCAATCCAAGACATATACGAGCAGATTTTCGCCGAGCCATGGTCCGACGCCTCTCAATCCAAAGATCCTCTTCCGCTGGCAAGGATGCGAGGCTTCGCGCAGAACGCAGAGCAGATCGAAAAAGGAATGTCGGCGACGGTGATGAACGGATTGAAGCCAGAGGTGGTGGCGGTGTTCAAAGAGTTGGTGATGGAGTTGGGAGTTTGTGCACTCGGCACTGAGTAG MAISGCLFGGANRFASVLESSISYVDPNPGHSIQDIYEQIFAEPWSDASQSKDPLPLARMRGFAQNAEQIEKGMSATVMNGLKPEVVAVFKELVMELGVCALGTE
BLAST of CmaCh08G011330 vs. Swiss-Prot
Match: NPC5_ARATH (Non-specific phospholipase C5 OS=Arabidopsis thaliana GN=NPC5 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.3e-19 Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 1
BLAST of CmaCh08G011330 vs. Swiss-Prot
Match: NPC4_ARATH (Non-specific phospholipase C4 OS=Arabidopsis thaliana GN=NPC4 PE=1 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 3.1e-18 Identity = 47/90 (52.22%), Postives = 57/90 (63.33%), Query Frame = 1
BLAST of CmaCh08G011330 vs. Swiss-Prot
Match: NPC3_ARATH (Non-specific phospholipase C3 OS=Arabidopsis thaliana GN=NPC3 PE=2 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15 Identity = 44/77 (57.14%), Postives = 51/77 (66.23%), Query Frame = 1
BLAST of CmaCh08G011330 vs. Swiss-Prot
Match: NPC1_ARATH (Non-specific phospholipase C1 OS=Arabidopsis thaliana GN=NPC1 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 9.0e-10 Identity = 37/76 (48.68%), Postives = 46/76 (60.53%), Query Frame = 1
BLAST of CmaCh08G011330 vs. Swiss-Prot
Match: NPC2_ARATH (Non-specific phospholipase C2 OS=Arabidopsis thaliana GN=NPC2 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 7.6e-09 Identity = 39/82 (47.56%), Postives = 45/82 (54.88%), Query Frame = 1
BLAST of CmaCh08G011330 vs. TrEMBL
Match: A0A0A0LK27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G119360 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 3.8e-23 Identity = 56/78 (71.79%), Postives = 63/78 (80.77%), Query Frame = 1
BLAST of CmaCh08G011330 vs. TrEMBL
Match: B9I6S1_POPTR (Phosphoesterase family protein OS=Populus trichocarpa GN=POPTR_0013s07120g PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.3e-20 Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 1
BLAST of CmaCh08G011330 vs. TrEMBL
Match: A0A0J8BEP0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g016810 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18 Identity = 47/77 (61.04%), Postives = 57/77 (74.03%), Query Frame = 1
BLAST of CmaCh08G011330 vs. TrEMBL
Match: M5X3Y2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004326mg PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18 Identity = 50/80 (62.50%), Postives = 60/80 (75.00%), Query Frame = 1
BLAST of CmaCh08G011330 vs. TrEMBL
Match: A0A068VGT0_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00011261001 PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.7e-18 Identity = 51/77 (66.23%), Postives = 57/77 (74.03%), Query Frame = 1
BLAST of CmaCh08G011330 vs. TAIR10
Match: AT3G03540.1 (AT3G03540.1 non-specific phospholipase C5) HSP 1 Score: 97.1 bits (240), Expect = 7.1e-21 Identity = 45/77 (58.44%), Postives = 55/77 (71.43%), Query Frame = 1
BLAST of CmaCh08G011330 vs. TAIR10
Match: AT3G03530.1 (AT3G03530.1 non-specific phospholipase C4) HSP 1 Score: 92.4 bits (228), Expect = 1.7e-19 Identity = 47/90 (52.22%), Postives = 57/90 (63.33%), Query Frame = 1
BLAST of CmaCh08G011330 vs. TAIR10
Match: AT3G03520.1 (AT3G03520.1 non-specific phospholipase C3) HSP 1 Score: 84.0 bits (206), Expect = 6.2e-17 Identity = 44/77 (57.14%), Postives = 51/77 (66.23%), Query Frame = 1
BLAST of CmaCh08G011330 vs. TAIR10
Match: AT1G07230.1 (AT1G07230.1 non-specific phospholipase C1) HSP 1 Score: 64.3 bits (155), Expect = 5.1e-11 Identity = 37/76 (48.68%), Postives = 46/76 (60.53%), Query Frame = 1
BLAST of CmaCh08G011330 vs. TAIR10
Match: AT2G26870.1 (AT2G26870.1 non-specific phospholipase C2) HSP 1 Score: 61.2 bits (147), Expect = 4.3e-10 Identity = 39/82 (47.56%), Postives = 45/82 (54.88%), Query Frame = 1
BLAST of CmaCh08G011330 vs. NCBI nr
Match: gi|449442455|ref|XP_004138997.1| (PREDICTED: non-specific phospholipase C3-like [Cucumis sativus]) HSP 1 Score: 115.5 bits (288), Expect = 5.5e-23 Identity = 56/78 (71.79%), Postives = 63/78 (80.77%), Query Frame = 1
BLAST of CmaCh08G011330 vs. NCBI nr
Match: gi|700206295|gb|KGN61414.1| (hypothetical protein Csa_2G119360 [Cucumis sativus]) HSP 1 Score: 115.5 bits (288), Expect = 5.5e-23 Identity = 56/78 (71.79%), Postives = 63/78 (80.77%), Query Frame = 1
BLAST of CmaCh08G011330 vs. NCBI nr
Match: gi|659114666|ref|XP_008457171.1| (PREDICTED: non-specific phospholipase C3-like [Cucumis melo]) HSP 1 Score: 115.5 bits (288), Expect = 5.5e-23 Identity = 56/78 (71.79%), Postives = 63/78 (80.77%), Query Frame = 1
BLAST of CmaCh08G011330 vs. NCBI nr
Match: gi|224124040|ref|XP_002319230.1| (phosphoesterase family protein [Populus trichocarpa]) HSP 1 Score: 106.3 bits (264), Expect = 3.3e-20 Identity = 47/78 (60.26%), Postives = 60/78 (76.92%), Query Frame = 1
BLAST of CmaCh08G011330 vs. NCBI nr
Match: gi|470142958|ref|XP_004307156.1| (PREDICTED: non-specific phospholipase C4-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 105.1 bits (261), Expect = 7.4e-20 Identity = 49/78 (62.82%), Postives = 62/78 (79.49%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |