CmaCh08G011020 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAGCAAGTTACCTTTTGAAATTGGGCAACTGGTAGAATCACGTTGCTTTCTCATTGGTTATCGTGGTGCTTGGTTCCGATGTAAGGTATGAATCATATTCTTTCTTGTAAAGGCTAATTATTGAAGTGGCGTTGTTGACAATCTAAGAGCATGTATCTGATTTACCCTTATGATCTAATTTTATCCATTTTTTTCAAATATTTTTAACGTTTACAATCTTAATTTGTCAATCTAAGGACAATCATCGAAGAAGATCTTCTTTCATTTGGGAGTTTCAGTAGTATCAAAATTAATACGAAGATTGTGGTTCTGGTGAAAGATAAGATAGTTAAAGAAGGATAATAGAAGGTTCATTGGTGGAGTATATAGTATGTGTAGGAATTCATGTTCTGGATTACTGAGAAGTTCATGGATTTTATCACTTTAGAGGCCTTATTATATCATTTAATGATCTTCTAACAGCTTTCCACAATGTTGCACACTGTTCATTTTTATATCTCTTTATTGTCTGAATGTTTAGTATTATATCTACGTGTGTATGGAGACGTTCTTGATTAAGAAAAGGATACTTATCTAGACTCAAGCCGTAGAGTCCCTAAAGGATTATACCTGCAACAAGAGCGAGCATTCCTCTAACCTAAGCTAGATCTGTCTGCTTTCAGTAGTTAATTGGTTTATAGGACATACTTTGTTATATGGGATAAATAGGTAAAAAAGCTGAGACCTACTTTGTAGTTCCATCAACTCCAGTATTTATTATCAGCATTTTTCTAAATAAATGAGTGAGAGTTTTGTGATTTATCATAATAAAATGAACAATGTTTCCCCGAGGCTTATTGCTTTTTCAGGCTTAAGCATTTTCATTGAAAATACTGATGGATTGAACCTCTAGGTCATGGGTTTAAACCTCCTTGGATCACCTACTTGAGATACTTCAAGATTAGTTATCCAAGTTTTCAATACTATTGGATCTTTTGCTTGGTCCCTTGTTTTTAATATCAAGCAAGCGTAGAAAGGTGAGAACATTTCTGATAGACTCTAAAACAAGAAATAAAAAAGAATACATATGCCCCCCGTGAATCAATTTCAGAAAGAGGGGATGCTGACCAGGAATTCTGAGGGCTTAGTCTCTCCATAGGCATAAGTGCCATATAAATTCATTTAAAATTTATACCCCACTTCCACTTCCCCAAGTATTAATTCTCTATCAAGAAATTTTTCTTCATGTCACATTACAGCGTAGTTTAGTTCTAAAGTCCTATTTTCATGGTATTATGAGAGATAAAAACATGAGAATGGGTTACAAGCGATTTATCTTATGTGGATCTAGTAAAGAAAAGTGGTTTCTGATCGTCCAAGTAATTTACTTCTTTAGTGAACCTTCTGCTATAATTGAACTTTGTTTCTAGAAATTCTTCTTGGATTAAAAAACACATATCTTTTGGCCAGTTTCTGTTATCAGGTACTGAATACATTACTTTTCTTAATTGTTTGTACATTTTCAACCAGATAAAGGACATTGCCTGGAGAATGGGGAGTCTATCGTATGAATTGGAATTTGTTGACTTTCCTGATGAAGGTACGTACTTATCTTTATTCTTTGTACTAGCTTGTCCCTTTCTTGGTCGAAGCCTTCAAGAGTTTTCATGGAATACGACTTCTATTATTCATTGATTTTATTATGACATCAAGTGAATGATATTGCGATGAAAAATTCCATTACTTTGACTATGCTTTTCATTACGAAGGATCCTTATTGTTTGATCACAAATGTATAACTAGTTTTCCAAATCAGCGTGGAAAATACTTTCTTTTGTAGTATAGCCATCTTTTGATCTCCAAACGTTGTGATCACAATTAGCTGATTTGACTACTTGTTTTGAAAATTGGAAGAATGTGTTATATCTTTGTAGAGAACAATTATAAAGTAGTTTGAAGAGGGGACTGCCCATTCTTAGACTAACAATTTGAATTAATTGTGAACTTCTTTGAGAATTCCATTTGCATTTTTGTCGTATAGTTTTACAGTGGTTGCTTGGCTTCTGTTCAGTACTTGGTAGTAAAAAACTTGTGGAATATTTACCAGCAGTAGGTTGAAGTTGATTTCAATTTTGGGTGAGCCTGAAGCCTTTCGTTAATTGATGCTTGTGGCTGAAATTATTTGTAGAATAAATATTTAGTATGTAGTCATGAAACATATTGGATTCAGTTTCTGGGACAATACTATATTCACGGTTAGAACTTGTCTCTGATTTCAGAAGTAGTATGGACAAAGCCGTTTCAAAAACCACCTGCAGCCTTTGGTATCCCATCAAATGGGCCAAAAGGGCAGTTGATGGTGCGTCCTCAGTTTCCACAAGTATATCGTGAAAAACAATTATCTGATAGTACCAACTCTCAGCTAGAGGTGACTGTTGTTGTGAATGATGTCTGGAAGGTGGGGGATTTAGTTGATTGGTGGAAGGATAACTGTTATTGGTCTTGCAAAATAATTGCAATATTGGGAGATGAGGAGGTCAAGGTACTTTTATTTACCTACTACCTTAGATTTTCAACTGTGTTCATTGGTTACTTCTTACTTATTCCTTATTAACTTAATCATGGATGATAGAGTGGATAGTGCAACGACTAACCAAATGCTCGGCTTTTATTTGTGACTAAGGATGCCTTTTCCCCAAAAATATTTATTGCCCAATTTTTTGAAGAGAAATATCTTAGCTACCTTGTCAGATATAACAAGTCAGACCAACTGTTTGATTTGTCTCCACTGTCTAATTATCGTGTGTAACTTTATTCATTAGTTTGAAGGCAATTTTCAAGGGATTGATTATTTTTCTTTTGTATTATCCTGTTTTTTCAAGGTTGAGCTGCTTCCCCCTCCATTTGGTGAAGGATCGGCTTATCATGCCTCCTCCAAGGATTTGCGGCCATCCTTAGACTGGTCTCCGGGATCTGGTTGGACGGTCCCTGATATGAAGGTGTCATTCTCTCAACCGTTCTATTCAATATTGGTCTCGTTAGTTAGAAATTGGGGCTTTTGTGCGTGAGAATTGGATTTTTTTCCCGTCTCAAGGGCTTGTTTTCAAAACTTTGGGTTGAAAACTTGATAAAAGAAAGCTTGGTTGGATGATTCAGATACTAAAGTCTTTTTTGTTGTCGTTCGCTTGGTACTAAGGTCTTTGTAATTCCTTTGTGGTTACAGGTGAATGGAAGTGCTCAATGTGCTCGGGTGCTTAACAATGGAAGTGTAGGTAAGAGCCGCAATAATAACACTAATCACTTCTAAGAATGTATGAATTATTATATTTTACAGTTAATGGCCACTTGTTTGTACATTAGAAAGATCTTCTTACAAGAATAATAAGCTATTTGTTTTATTCATTTATGTTTTGGGATTGATTCATTATGGTCTCTTGGTGATGCACGATAGCCTCGAGACCCCAGAACGTGAGTCAAGGAAATGACAGTGAAGCCGCAGCTGGAAACTCAAATGCATCGTTAGATTTACAGGCTAGTTCCACGCGACCTACTCCTGCACCAGCAAGAAAGTCCAAGCAAATGTACAGCAACACGGCATCGAAGGGGAAACACGAACACACACCAGAATTAAGTTCCGATTCGAACCGTGTGAATACAGTAGCCAAGAAAAAAAGTACATCGGACAATGACTCGAGTTCACCTACTCGAGAACGAAGCACAACAAAAGAAACTCGAGGAACAAAAACTGATGCAGATGGATGTAGTGATGGTCAGTCTGTAAAGATGGTACTTAGTTTAAATTCCATGCACCATGGTTCATTAGAAGACGCAATTTTGGACTTGGAAGAGCTGATAAACAGGATTAAATGGATCAAACAAATTTTGGAGGGTGGAACGGCTTTGCCAAATGCTTCAGGATCTTCATGGAAATTTCTGGAACACCGATCCTCATCTACACCAAAATGAATGCATCACAAGGAAAAAAGGTATTTTCACGAGTCTATGCATGAACTCTCTTTTGAAAAAATGCAAAACTCTGTGATCTCACTAAAATTTGATGCATCTCTCAGTTACCAACCAAAAGTTTTTCATCTTAAAAATGTAGTTATTCTCATATATATATATATATATGTGTGTGTGTGTGTTTATTTGTGGATTAGGATATGTGTCCATATAAAATCACTGAAGCTAATTTTTTTTAGAGTAATATTCTTTTAGAAAATAGTAAATTTATAATTGACTATTATTATTATTATTATTATTATTATTTAGTTTAATTACTTTTTATTTAATGTCTAAAAATGGATTATGTACCCATTGTTTGAAAAGTTGCCAAATAAACAAATAAAGGCATCAAATTAATATTTTTTAAAGATATTTTTAGATTAACATTTGTTATATTGTATTTCTAAATCTTAGATAAAAAAAAAATACATTTATATTTTCATTGTTTTTTTTTTTTTTACATTAAAGGCCTATATATATATTTAGGTTTTAATGAATTATTAATAAATTGTGGGGAGAGATAAATAGTATAAATTTAATTATATTTTTTATAATATAATTTAATAGATAAAACATCAATCAAGGTAGAAGATCCGTCCATATTTGTTGAAACAGTGGTACATAGTGAACTTTATTAGACAGTGTTGTTTCATTCCATACTAAAACAACGCACAACATAGAGCCTAGCTAAGAAGAAGACTTTGAAGAGATGGAGAAGAGAGCTCAGTGCTGAGATTTTCCTTCTCTTTATTGCTCCCTCAATGATAGGGTAATGAAGAAGCAAAGCAAAGGATAGCAGAAACATCTGCCCAAACATCTCCTCAAACTTCCTCTCCTTCAACACCTTACACATCTCACCCACTAGGCATATCACATTCCATACAGCCATCACAAACAGAGGAGCCATTACCATTCCAGCTCCCTGCAAATCAAACTTACCCTTTTCGTATTTCTCCAGCTTCTCTTTGTCTATTACTTTGTTTGTTAGGTTCAACTCCATCTTCTTCTTCATCAGGGCATCTACAAGCCCGAACAAGCAAGGCGAAACCGACTTCAC ATGGCAAGCAAGTTACCTTTTGAAATTGGGCAACTGGTAGAATCACGTTGCTTTCTCATTGGTTATCGTGGTGCTTGGTTCCGATGTAAGATAAAGGACATTGCCTGGAGAATGGGGAGTCTATCGTATGAATTGGAATTTGTTGACTTTCCTGATGAAGAAGTAGTATGGACAAAGCCGTTTCAAAAACCACCTGCAGCCTTTGGTATCCCATCAAATGGGCCAAAAGGGCAGTTGATGGTGCGTCCTCAGTTTCCACAAGTATATCGTGAAAAACAATTATCTGATAGTACCAACTCTCAGCTAGAGGTGACTGTTGTTGTGAATGATGTCTGGAAGGTGGGGGATTTAGTTGATTGGTGGAAGGATAACTGTTATTGGTCTTGCAAAATAATTGCAATATTGGGAGATGAGGAGGTCAAGGTTGAGCTGCTTCCCCCTCCATTTGGTGAAGGATCGGCTTATCATGCCTCCTCCAAGGATTTGCGGCCATCCTTAGACTGGTCTCCGGGATCTGGTTGGACGGTCCCTGATATGAAGGTGAATGGAAGTGCTCAATGTGCTCGGGTGCTTAACAATGGAAGTGTAGCCTCGAGACCCCAGAACGTGAGTCAAGGAAATGACAGTGAAGCCGCAGCTGGAAACTCAAATGCATCGTTAGATTTACAGGCTAGTTCCACGCGACCTACTCCTGCACCAGCAAGAAAGTCCAAGCAAATGTACAGCAACACGGCATCGAAGGGGAAACACGAACACACACCAGAATTAAGTTCCGATTCGAACCGTGTGAATACAGTAGCCAAGAAAAAAAGTACATCGGACAATGACTCGAGTTCACCTACTCGAGAACGAAGCACAACAAAAGAAACTCGAGGAACAAAAACTGATGCAGATGGATGTAGTGATGGTCAGTCTGTAAAGATGGTACTTAGTTTAAATTCCATGCACCATGGTTCATTAGAAGACGCAATTTTGGACTTGGAAGAGCTGATAAACAGGATTAAATGGATCAAACAAATTTTGGAGGGTGGAACGGCTTTGCCAAATGCTTCAGGATCTTCATGGAAATTTCTGGAACACCGATCCTCATCTACACCAAAATGAATGCATCACAAGGAAAAAAGGGCATCTACAAGCCCGAACAAGCAAGGCGAAACCGACTTCAC ATGGCAAGCAAGTTACCTTTTGAAATTGGGCAACTGGTAGAATCACGTTGCTTTCTCATTGGTTATCGTGGTGCTTGGTTCCGATGTAAGATAAAGGACATTGCCTGGAGAATGGGGAGTCTATCGTATGAATTGGAATTTGTTGACTTTCCTGATGAAGAAGTAGTATGGACAAAGCCGTTTCAAAAACCACCTGCAGCCTTTGGTATCCCATCAAATGGGCCAAAAGGGCAGTTGATGGTGCGTCCTCAGTTTCCACAAGTATATCGTGAAAAACAATTATCTGATAGTACCAACTCTCAGCTAGAGGTGACTGTTGTTGTGAATGATGTCTGGAAGGTGGGGGATTTAGTTGATTGGTGGAAGGATAACTGTTATTGGTCTTGCAAAATAATTGCAATATTGGGAGATGAGGAGGTCAAGGTTGAGCTGCTTCCCCCTCCATTTGGTGAAGGATCGGCTTATCATGCCTCCTCCAAGGATTTGCGGCCATCCTTAGACTGGTCTCCGGGATCTGGTTGGACGGTCCCTGATATGAAGGTGAATGGAAGTGCTCAATGTGCTCGGGTGCTTAACAATGGAAGTGTAGCCTCGAGACCCCAGAACGTGAGTCAAGGAAATGACAGTGAAGCCGCAGCTGGAAACTCAAATGCATCGTTAGATTTACAGGCTAGTTCCACGCGACCTACTCCTGCACCAGCAAGAAAGTCCAAGCAAATGTACAGCAACACGGCATCGAAGGGGAAACACGAACACACACCAGAATTAAGTTCCGATTCGAACCGTGTGAATACAGTAGCCAAGAAAAAAAGTACATCGGACAATGACTCGAGTTCACCTACTCGAGAACGAAGCACAACAAAAGAAACTCGAGGAACAAAAACTGATGCAGATGGATGTAGTGATGGTCAGTCTGTAAAGATGGTACTTAGTTTAAATTCCATGCACCATGGTTCATTAGAAGACGCAATTTTGGACTTGGAAGAGCTGATAAACAGGATTAAATGGATCAAACAAATTTTGGAGGGTGGAACGGCTTTGCCAAATGCTTCAGGATCTTCATGGAAATTTCTGGAACACCGATCCTCATCTACACCAAAATGA MASKLPFEIGQLVESRCFLIGYRGAWFRCKIKDIAWRMGSLSYELEFVDFPDEEVVWTKPFQKPPAAFGIPSNGPKGQLMVRPQFPQVYREKQLSDSTNSQLEVTVVVNDVWKVGDLVDWWKDNCYWSCKIIAILGDEEVKVELLPPPFGEGSAYHASSKDLRPSLDWSPGSGWTVPDMKVNGSAQCARVLNNGSVASRPQNVSQGNDSEAAAGNSNASLDLQASSTRPTPAPARKSKQMYSNTASKGKHEHTPELSSDSNRVNTVAKKKSTSDNDSSSPTRERSTTKETRGTKTDADGCSDGQSVKMVLSLNSMHHGSLEDAILDLEELINRIKWIKQILEGGTALPNASGSSWKFLEHRSSSTPK
BLAST of CmaCh08G011020 vs. TrEMBL
Match: A0A067DG05_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g017113mg PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 7.7e-71 Identity = 166/378 (43.92%), Postives = 226/378 (59.79%), Query Frame = 1
BLAST of CmaCh08G011020 vs. TrEMBL
Match: A0A0B0MDK3_GOSAR (Arginine--tRNA ligase OS=Gossypium arboreum GN=F383_17117 PE=4 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 3.0e-67 Identity = 167/374 (44.65%), Postives = 213/374 (56.95%), Query Frame = 1
BLAST of CmaCh08G011020 vs. TrEMBL
Match: A0A067L208_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00269 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.5e-66 Identity = 155/368 (42.12%), Postives = 214/368 (58.15%), Query Frame = 1
BLAST of CmaCh08G011020 vs. TrEMBL
Match: A0A0D2TH56_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_012G021000 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 2.2e-65 Identity = 168/381 (44.09%), Postives = 213/381 (55.91%), Query Frame = 1
BLAST of CmaCh08G011020 vs. TrEMBL
Match: A0A061EM70_THECC (Agenet domain-containing protein, putative isoform 1 OS=Theobroma cacao GN=TCM_020809 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 5.9e-63 Identity = 159/372 (42.74%), Postives = 211/372 (56.72%), Query Frame = 1
BLAST of CmaCh08G011020 vs. TAIR10
Match: AT5G52070.1 (AT5G52070.1 Agenet domain-containing protein) HSP 1 Score: 179.5 bits (454), Expect = 3.8e-45 Identity = 90/208 (43.27%), Postives = 128/208 (61.54%), Query Frame = 1
BLAST of CmaCh08G011020 vs. TAIR10
Match: AT5G42670.1 (AT5G42670.1 Agenet domain-containing protein) HSP 1 Score: 177.2 bits (448), Expect = 1.9e-44 Identity = 85/187 (45.45%), Postives = 119/187 (63.64%), Query Frame = 1
BLAST of CmaCh08G011020 vs. NCBI nr
Match: gi|659130487|ref|XP_008465199.1| (PREDICTED: uncharacterized protein LOC103502861 [Cucumis melo]) HSP 1 Score: 520.0 bits (1338), Expect = 3.4e-144 Identity = 274/371 (73.85%), Postives = 297/371 (80.05%), Query Frame = 1
BLAST of CmaCh08G011020 vs. NCBI nr
Match: gi|645235724|ref|XP_008224401.1| (PREDICTED: uncharacterized protein LOC103324142 [Prunus mume]) HSP 1 Score: 293.5 bits (750), Expect = 5.1e-76 Identity = 174/365 (47.67%), Postives = 221/365 (60.55%), Query Frame = 1
BLAST of CmaCh08G011020 vs. NCBI nr
Match: gi|731402855|ref|XP_010654818.1| (PREDICTED: uncharacterized protein LOC100263001 [Vitis vinifera]) HSP 1 Score: 284.6 bits (727), Expect = 2.4e-73 Identity = 165/376 (43.88%), Postives = 224/376 (59.57%), Query Frame = 1
BLAST of CmaCh08G011020 vs. NCBI nr
Match: gi|1009141014|ref|XP_015887963.1| (PREDICTED: uncharacterized protein LOC107422973 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 280.0 bits (715), Expect = 5.8e-72 Identity = 168/372 (45.16%), Postives = 221/372 (59.41%), Query Frame = 1
BLAST of CmaCh08G011020 vs. NCBI nr
Match: gi|225432961|ref|XP_002280501.1| (PREDICTED: uncharacterized protein LOC100254457 isoform X1 [Vitis vinifera]) HSP 1 Score: 278.9 bits (712), Expect = 1.3e-71 Identity = 167/378 (44.18%), Postives = 227/378 (60.05%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |