CmaCh08G010440 (gene) Cucurbita maxima (Rimu)

NameCmaCh08G010440
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr08 : 6536296 .. 6536896 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTTACTAACCCGAAGTCCAGAAATGCCAAAGCAGAAGAAGAAGAAGATGAAGAACTCTTTAGGTAATTTTATCAAACCGCAAACTGAATTCTCTCCTTGAATATTCTATATGCTAAATATTACCCATTGTAGGAAGCTGGAAACAGAGAAGCATCGAAGGGATCTATGGACGATTGGAAATGGATTGGGTTACCTTGAAAATCCAGACACTGTCGATTACATCATCCAAGATCCCAGAAGATTCTTCATCGAACTCCGGCGCCGGCTCGTCGGACCACCAACGGCGGCGTGTCTTCCGGCTGGTTCCGAAGCGAATGCCGGGGTCGAAGCCTTGCTGGGCGGCTTCTTCGTCTTCATTTCTGCGTCTGAACTTCTGGGAACCGAAGGATTCGGCATTGGAGTCCCAAGGACGATAGTGGGTTGTCGCAGAGGAGAAGCGAAAGCGAGAAGAATGATTGGGGAAAATGGATCGCCATGGATGAGTGAAGCTGGTGGGATGAAGAAGCAGGGCCTTCATTTCGCCACGTTATCCGTTATGTAATTGCTTCCCTATCCTCCTCTCTTAAACCTCTCTCTCCTTCTATCGATATTCTCT

mRNA sequence

ATGAATTTTACTAACCCGAAGTCCAGAAATGCCAAAGCAGAAGAAGAAGAAGATGAAGAACTCTTTAGGAAGCTGGAAACAGAGAAGCATCGAAGGGATCTATGGACGATTGGAAATGGATTGGGTTACCTTGAAAATCCAGACACTGTCGATTACATCATCCAAGATCCCAGAAGATTCTTCATCGAACTCCGGCGCCGGCTCGTCGGACCACCAACGGCGGCGTGTCTTCCGGCTGGTTCCGAAGCGAATGCCGGGGTCGAAGCCTTGCTGGGCGGCTTCTTCGTCTTCATTTCTGCGTCTGAACTTCTGGGAACCGAAGGATTCGGCATTGGAGTCCCAAGGACGATAGTGGGTTGTCGCAGAGGAGAAGCGAAAGCGAGAAGAATGATTGGGGAAAATGGATCGCCATGGATGAGTGAAGCTGGTGGGATGAAGAAGCAGGGCCTTCATTTCGCCACGTTATCCGTTATGTAATTGCTTCCCTATCCTCCTCTCTTAAACCTCTCTCTCCTTCTATCGATATTCTCT

Coding sequence (CDS)

ATGAATTTTACTAACCCGAAGTCCAGAAATGCCAAAGCAGAAGAAGAAGAAGATGAAGAACTCTTTAGGAAGCTGGAAACAGAGAAGCATCGAAGGGATCTATGGACGATTGGAAATGGATTGGGTTACCTTGAAAATCCAGACACTGTCGATTACATCATCCAAGATCCCAGAAGATTCTTCATCGAACTCCGGCGCCGGCTCGTCGGACCACCAACGGCGGCGTGTCTTCCGGCTGGTTCCGAAGCGAATGCCGGGGTCGAAGCCTTGCTGGGCGGCTTCTTCGTCTTCATTTCTGCGTCTGAACTTCTGGGAACCGAAGGATTCGGCATTGGAGTCCCAAGGACGATAGTGGGTTGTCGCAGAGGAGAAGCGAAAGCGAGAAGAATGATTGGGGAAAATGGATCGCCATGGATGAGTGAAGCTGGTGGGATGAAGAAGCAGGGCCTTCATTTCGCCACGTTATCCGTTATGTAA

Protein sequence

MNFTNPKSRNAKAEEEEDEELFRKLETEKHRRDLWTIGNGLGYLENPDTVDYIIQDPRRFFIELRRRLVGPPTAACLPAGSEANAGVEALLGGFFVFISASELLGTEGFGIGVPRTIVGCRRGEAKARRMIGENGSPWMSEAGGMKKQGLHFATLSVM
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G010440.1CmaCh08G010440.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 8..28
scor

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh08G010440CmoCh08G010160Cucurbita moschata (Rifu)cmacmoB912
CmaCh08G010440Lsi09G011730Bottle gourd (USVL1VR-Ls)cmalsiB811
CmaCh08G010440Carg11006Silver-seed gourdcarcmaB1495
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh08G010440Bottle gourd (USVL1VR-Ls)cmalsiB839
CmaCh08G010440Bottle gourd (USVL1VR-Ls)cmalsiB840
CmaCh08G010440Cucumber (Gy14) v2cgybcmaB268
CmaCh08G010440Cucumber (Gy14) v2cgybcmaB454
CmaCh08G010440Melon (DHL92) v3.6.1cmamedB944
CmaCh08G010440Melon (DHL92) v3.6.1cmamedB946
CmaCh08G010440Melon (DHL92) v3.6.1cmamedB950
CmaCh08G010440Silver-seed gourdcarcmaB0321
CmaCh08G010440Silver-seed gourdcarcmaB0330
CmaCh08G010440Silver-seed gourdcarcmaB1089
CmaCh08G010440Silver-seed gourdcarcmaB1327
CmaCh08G010440Cucumber (Chinese Long) v3cmacucB1043
CmaCh08G010440Cucumber (Chinese Long) v3cmacucB1049
CmaCh08G010440Cucumber (Chinese Long) v3cmacucB1058
CmaCh08G010440Watermelon (97103) v2cmawmbB914
CmaCh08G010440Watermelon (97103) v2cmawmbB921
CmaCh08G010440Watermelon (97103) v2cmawmbB927
CmaCh08G010440Wax gourdcmawgoB1090
CmaCh08G010440Wax gourdcmawgoB1102
CmaCh08G010440Wax gourdcmawgoB1112
CmaCh08G010440Cucurbita maxima (Rimu)cmacmaB296
CmaCh08G010440Cucurbita maxima (Rimu)cmacmaB373
CmaCh08G010440Cucurbita maxima (Rimu)cmacmaB511
CmaCh08G010440Cucurbita maxima (Rimu)cmacmaB554
CmaCh08G010440Cucumber (Gy14) v1cgycmaB0732
CmaCh08G010440Cucumber (Gy14) v1cgycmaB1059
CmaCh08G010440Cucurbita moschata (Rifu)cmacmoB883
CmaCh08G010440Cucurbita moschata (Rifu)cmacmoB887
CmaCh08G010440Cucurbita moschata (Rifu)cmacmoB909
CmaCh08G010440Cucurbita moschata (Rifu)cmacmoB910
CmaCh08G010440Wild cucumber (PI 183967)cmacpiB899
CmaCh08G010440Wild cucumber (PI 183967)cmacpiB903
CmaCh08G010440Wild cucumber (PI 183967)cmacpiB911
CmaCh08G010440Cucumber (Chinese Long) v2cmacuB881
CmaCh08G010440Cucumber (Chinese Long) v2cmacuB885
CmaCh08G010440Cucumber (Chinese Long) v2cmacuB893
CmaCh08G010440Melon (DHL92) v3.5.1cmameB843
CmaCh08G010440Melon (DHL92) v3.5.1cmameB845
CmaCh08G010440Melon (DHL92) v3.5.1cmameB850
CmaCh08G010440Watermelon (Charleston Gray)cmawcgB795
CmaCh08G010440Watermelon (Charleston Gray)cmawcgB804
CmaCh08G010440Watermelon (Charleston Gray)cmawcgB811
CmaCh08G010440Watermelon (97103) v1cmawmB866
CmaCh08G010440Watermelon (97103) v1cmawmB869
CmaCh08G010440Watermelon (97103) v1cmawmB878
CmaCh08G010440Cucurbita pepo (Zucchini)cmacpeB895
CmaCh08G010440Cucurbita pepo (Zucchini)cmacpeB916
CmaCh08G010440Cucurbita pepo (Zucchini)cmacpeB928
CmaCh08G010440Cucurbita pepo (Zucchini)cmacpeB930
CmaCh08G010440Cucurbita pepo (Zucchini)cmacpeB931