CmaCh08G006990 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGAAATTTTATAATTTAATCTATCCAATAACAAGCAGCTGCCGACACTCGTTCCCCCACTAGTGGTTGTCATTTTGCTTCGAGCCTTTTGGCCTTCGGTGGTGCTCAGAGCTTACCCCATTTCATCTTCTTCCTTCTTGGGGCCTTTGAGTAGGAGTTGCAGAGTTGCAGAGTTTTCCCTGTTTTGGAATTCTGAGACGACCATTTTGAAATGGAGTTGTATCGATTCCTTGTTCTAGTAATACAAGGTTGTATTGAATGCGTTAGTGCTTTTTGTTTCTAAATCTTCATCTGGGTTTCAACTGCTATCTGATTTTTGTTCTGAAACTATCTTCAATTATCAATATCTCTGAAGAAATGCTATCGGCAAAATCTGAGTCTGATATTACCAGTTTGGCGCCATCGTCGCCTTCAAGGTCACCAAAGCGACCAACATACTATGTGCAGAGCCCTTCAAGGTGTTCTAACGATGGGGATAAATCTTCATCAATGCACACTACTCCAATCTATAACAATAGCCCAATAGAGTCACCTTCACACCCGTCGTTCGGTCGTCATTCAAGAAACTCATCTGCGAGCCGATTTTCCGGTATTTTCCGGTCATCTTCAGGCAGAAAAGGGAGCAAGAAACAGAGCAATGACAAGGGGTGGCCTGAGTGTAATGTGATTATGGAAGAAGGGCCCTATGATGACCTTGAGGACAAGGCTCTCTCACGACGCTTTCAGGCAATAATTGCTCTGCTGAGTTTCATTACTTTGTTCACTCTTTTATGCTTGATCATTTGGGGCGCCAGCAGGCCCTTCAAGGCACAGATTTCTGTCAAGGTAATCAAGTTACTAATAGCTATTGATATGGTTGGATATATTTATATATTCTTCACCCTCCTGATGAATAAATAAGTGATCATCTAAAGATTAAAGAAGTAGTGAAGGTTGCTCAAACCTTCACGCACGTGAAGTGATCATCTATGTTTACTAGAGAAGAAATGATACGCTAGAAATTTCAACATAAGACCCTATATTTGACCAAAAAAAAAGAAAAAAAAACTTTTAAACTAAGGACGCAGTTATACAACCTATAGACCAGAACATATTCAAGAAGATCGTCAAACAATAAAGGAACTGATAGCTTGAAGTATGTTCATCTTTTATATATATCCGTCACAGTTCTTTTAAACTTAAACTCTCTTCTTGACCGTGTCAATTTCCAACTTCATGAACAGAGCGTTCATTGTTTAATGTACAATCTGATCCTTTCAGAGCTTGGCTGTGCATAATTTCTATGTTGGGGAAGGTTCAGATTCCACTGGGGTTCCTACCAAGTTACTGACATTGAATAGCACATTGAGGTTAAGCGTATACAACCCTGCAACAATATTTGGCATTCATGTTACCTCCACACCAATTGATCTAATTTATTCAGAGATTGTTGTGGCATCTGGTCAGGTAATGAACTTCTACTGAGTTTCTGTTTTTTGACTCACAGCTTTGGAACTAATTGGTTTGAAAAAAAAGCTTGGATTGGAGGTCTGCATTCGTAGGCTTGCCCTAGGCATTAAAGCTAAGGGTTAAACACAAAATCCAGGATTGGAATGTAAATCTTCTCAAGAATTTGTGATTCTGTAACCGAAAATCGACCAAAGACATTAAATCATATGCCTTATGATGATCCTATGTGCAGTTGAGGAAATATTACCAACCAAGAAACAGTCACCGGACAGTATCTGTCAATTTGGAAGGAATCAAGGTTCCCATGTATGGAGCTGCATCAACTTTGTCTTTTCCCTCAACAAGTGGTCCGGTTCCAATGACGTTGGTGTTCAAAATTCGATCCCGAGGAAACGTTGTTGGGAAGCTAGTGAGAACAACGCATATAAAGCAAATCTCTTGTCCAGTAGGCATTGATTCTACCAGCACCAAAGCCATCGTGTTCAAGAAGAATTCGTGCACATATGAATGAGATTCTATTGCAGTTATTGCACCAACTAGGCTCACTGACTCCTGAGTTTCATATCAATGCAGTTATCTGTCTGTGAATGAAGTTGATAAGAAATTTGTCCGCAGATTATTTTTTTGTTGGTTTGTGCAGAGATACCTCAATCAATAAAGAGTCCACCTTTGTAAAGATCTTTCTGTTTCTGTGCAAGAGTGTTAACAAAACTGTATCAGATTTGTCTCCTCAACCATCTCTGGATGGCTTTAAATGACTCAAAATGAAGCAATACTCTTATTTCATTGCAGAAAATCAGGTTCTGGAAGAGAACTGATCAAGGATTCTGCATGGAATGTGGCCCTAAAACTATTATCGGAAGAATTAGATAAGAAGATGGTATAAGTTCTGTAAAGATGTAGCTACGCATGTGGGAATTTTCAAGGAGTCCTTGTCAACGTACATGGGGGGTTATGATGTGCATTAACCAAAGTCACTATCACCAATTTAG GGGAAATTTTATAATTTAATCTATCCAATAACAAGCAGCTGCCGACACTCGTTCCCCCACTAGTGGTTGTCATTTTGCTTCGAGCCTTTTGGCCTTCGGTGGTGCTCAGAGCTTACCCCATTTCATCTTCTTCCTTCTTGGGGCCTTTGAGTAGGAGTTGCAGAGTTGCAGAGTTTTCCCTGTTTTGGAATTCTGAGACGACCATTTTGAAATGGAGTTGTATCGATTCCTTGTTCTAGTAATACAAGGTTGTATTGAATGCGTTAGTGCTTTTTGTTTCTAAATCTTCATCTGGGTTTCAACTGCTATCTGATTTTTGTTCTGAAACTATCTTCAATTATCAATATCTCTGAAGAAATGCTATCGGCAAAATCTGAGTCTGATATTACCAGTTTGGCGCCATCGTCGCCTTCAAGGTCACCAAAGCGACCAACATACTATGTGCAGAGCCCTTCAAGGTGTTCTAACGATGGGGATAAATCTTCATCAATGCACACTACTCCAATCTATAACAATAGCCCAATAGAGTCACCTTCACACCCGTCGTTCGGTCGTCATTCAAGAAACTCATCTGCGAGCCGATTTTCCGGTATTTTCCGGTCATCTTCAGGCAGAAAAGGGAGCAAGAAACAGAGCAATGACAAGGGGTGGCCTGAGTGTAATGTGATTATGGAAGAAGGGCCCTATGATGACCTTGAGGACAAGGCTCTCTCACGACGCTTTCAGGCAATAATTGCTCTGCTGAGTTTCATTACTTTGTTCACTCTTTTATGCTTGATCATTTGGGGCGCCAGCAGGCCCTTCAAGGCACAGATTTCTGTCAAGAGCTTGGCTGTGCATAATTTCTATGTTGGGGAAGGTTCAGATTCCACTGGGGTTCCTACCAAGTTACTGACATTGAATAGCACATTGAGGTTAAGCGTATACAACCCTGCAACAATATTTGGCATTCATGTTACCTCCACACCAATTGATCTAATTTATTCAGAGATTGTTGTGGCATCTGGTCAGTTGAGGAAATATTACCAACCAAGAAACAGTCACCGGACAGTATCTGTCAATTTGGAAGGAATCAAGGTTCCCATGTATGGAGCTGCATCAACTTTGTCTTTTCCCTCAACAAGTGGTCCGGTTCCAATGACGTTGGTGTTCAAAATTCGATCCCGAGGAAACGTTGTTGGGAAGCTAGTGAGAACAACGCATATAAAGCAAATCTCTTGTCCAGTAGGCATTGATTCTACCAGCACCAAAGCCATCGTGTTCAAGAAGAATTCGTGCACATATGAATGAGATTCTATTGCAGTTATTGCACCAACTAGGCTCACTGACTCCTGAGTTTCATATCAATGCAGTTATCTGTCTGTGAATGAAGTTGATAAGAAATTTGTCCGCAGATTATTTTTTTGTTGGTTTGTGCAGAGATACCTCAATCAATAAAGAGTCCACCTTTGTAAAGATCTTTCTGTTTCTGTGCAAGAGTGTTAACAAAACTGTATCAGATTTGTCTCCTCAACCATCTCTGGATGGCTTTAAATGACTCAAAATGAAGCAATACTCTTATTTCATTGCAGAAAATCAGGTTCTGGAAGAGAACTGATCAAGGATTCTGCATGGAATGTGGCCCTAAAACTATTATCGGAAGAATTAGATAAGAAGATGGTATAAGTTCTGTAAAGATGTAGCTACGCATGTGGGAATTTTCAAGGAGTCCTTGTCAACGTACATGGGGGGTTATGATGTGCATTAACCAAAGTCACTATCACCAATTTAG ATGCTATCGGCAAAATCTGAGTCTGATATTACCAGTTTGGCGCCATCGTCGCCTTCAAGGTCACCAAAGCGACCAACATACTATGTGCAGAGCCCTTCAAGGTGTTCTAACGATGGGGATAAATCTTCATCAATGCACACTACTCCAATCTATAACAATAGCCCAATAGAGTCACCTTCACACCCGTCGTTCGGTCGTCATTCAAGAAACTCATCTGCGAGCCGATTTTCCGGTATTTTCCGGTCATCTTCAGGCAGAAAAGGGAGCAAGAAACAGAGCAATGACAAGGGGTGGCCTGAGTGTAATGTGATTATGGAAGAAGGGCCCTATGATGACCTTGAGGACAAGGCTCTCTCACGACGCTTTCAGGCAATAATTGCTCTGCTGAGTTTCATTACTTTGTTCACTCTTTTATGCTTGATCATTTGGGGCGCCAGCAGGCCCTTCAAGGCACAGATTTCTGTCAAGAGCTTGGCTGTGCATAATTTCTATGTTGGGGAAGGTTCAGATTCCACTGGGGTTCCTACCAAGTTACTGACATTGAATAGCACATTGAGGTTAAGCGTATACAACCCTGCAACAATATTTGGCATTCATGTTACCTCCACACCAATTGATCTAATTTATTCAGAGATTGTTGTGGCATCTGGTCAGTTGAGGAAATATTACCAACCAAGAAACAGTCACCGGACAGTATCTGTCAATTTGGAAGGAATCAAGGTTCCCATGTATGGAGCTGCATCAACTTTGTCTTTTCCCTCAACAAGTGGTCCGGTTCCAATGACGTTGGTGTTCAAAATTCGATCCCGAGGAAACGTTGTTGGGAAGCTAGTGAGAACAACGCATATAAAGCAAATCTCTTGTCCAGTAGGCATTGATTCTACCAGCACCAAAGCCATCGTGTTCAAGAAGAATTCGTGCACATATGAATGA MLSAKSESDITSLAPSSPSRSPKRPTYYVQSPSRCSNDGDKSSSMHTTPIYNNSPIESPSHPSFGRHSRNSSASRFSGIFRSSSGRKGSKKQSNDKGWPECNVIMEEGPYDDLEDKALSRRFQAIIALLSFITLFTLLCLIIWGASRPFKAQISVKSLAVHNFYVGEGSDSTGVPTKLLTLNSTLRLSVYNPATIFGIHVTSTPIDLIYSEIVVASGQLRKYYQPRNSHRTVSVNLEGIKVPMYGAASTLSFPSTSGPVPMTLVFKIRSRGNVVGKLVRTTHIKQISCPVGIDSTSTKAIVFKKNSCTYE
BLAST of CmaCh08G006990 vs. TrEMBL
Match: A0A0A0K7D1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G446930 PE=4 SV=1) HSP 1 Score: 567.0 bits (1460), Expect = 1.4e-158 Identity = 292/311 (93.89%), Postives = 299/311 (96.14%), Query Frame = 1
BLAST of CmaCh08G006990 vs. TrEMBL
Match: V4SSV4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026158mg PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 1.1e-126 Identity = 236/310 (76.13%), Postives = 268/310 (86.45%), Query Frame = 1
BLAST of CmaCh08G006990 vs. TrEMBL
Match: V4SMV9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026158mg PE=4 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 1.9e-126 Identity = 236/310 (76.13%), Postives = 268/310 (86.45%), Query Frame = 1
BLAST of CmaCh08G006990 vs. TrEMBL
Match: D7U0H5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g04260 PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 6.0e-125 Identity = 234/312 (75.00%), Postives = 272/312 (87.18%), Query Frame = 1
BLAST of CmaCh08G006990 vs. TrEMBL
Match: C6T8K0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G015800 PE=2 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 2.3e-124 Identity = 229/310 (73.87%), Postives = 273/310 (88.06%), Query Frame = 1
BLAST of CmaCh08G006990 vs. TAIR10
Match: AT1G45688.1 (AT1G45688.1 unknown protein) HSP 1 Score: 223.0 bits (567), Expect = 2.5e-58 Identity = 128/269 (47.58%), Postives = 182/269 (67.66%), Query Frame = 1
BLAST of CmaCh08G006990 vs. TAIR10
Match: AT5G42860.1 (AT5G42860.1 unknown protein) HSP 1 Score: 211.8 bits (538), Expect = 5.8e-55 Identity = 134/332 (40.36%), Postives = 195/332 (58.73%), Query Frame = 1
BLAST of CmaCh08G006990 vs. TAIR10
Match: AT3G24600.1 (AT3G24600.1 Late embryogenesis abundant protein, group 2) HSP 1 Score: 181.4 bits (459), Expect = 8.4e-46 Identity = 101/255 (39.61%), Postives = 156/255 (61.18%), Query Frame = 1
BLAST of CmaCh08G006990 vs. TAIR10
Match: AT2G41990.1 (AT2G41990.1 Late embryogenesis abundant protein, group 2 (InterPro:IPR004864)) HSP 1 Score: 139.4 bits (350), Expect = 3.7e-33 Identity = 106/317 (33.44%), Postives = 171/317 (53.94%), Query Frame = 1
BLAST of CmaCh08G006990 vs. TAIR10
Match: AT4G35170.1 (AT4G35170.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family) HSP 1 Score: 132.5 bits (332), Expect = 4.5e-31 Identity = 96/290 (33.10%), Postives = 155/290 (53.45%), Query Frame = 1
BLAST of CmaCh08G006990 vs. NCBI nr
Match: gi|449448030|ref|XP_004141769.1| (PREDICTED: uncharacterized protein LOC101220910 [Cucumis sativus]) HSP 1 Score: 567.0 bits (1460), Expect = 2.0e-158 Identity = 292/311 (93.89%), Postives = 299/311 (96.14%), Query Frame = 1
BLAST of CmaCh08G006990 vs. NCBI nr
Match: gi|659124448|ref|XP_008462165.1| (PREDICTED: uncharacterized protein LOC103500589 [Cucumis melo]) HSP 1 Score: 563.1 bits (1450), Expect = 2.9e-157 Identity = 290/311 (93.25%), Postives = 298/311 (95.82%), Query Frame = 1
BLAST of CmaCh08G006990 vs. NCBI nr
Match: gi|1009112206|ref|XP_015867106.1| (PREDICTED: uncharacterized protein LOC107404638 [Ziziphus jujuba]) HSP 1 Score: 477.6 bits (1228), Expect = 1.6e-131 Identity = 245/310 (79.03%), Postives = 272/310 (87.74%), Query Frame = 1
BLAST of CmaCh08G006990 vs. NCBI nr
Match: gi|567868677|ref|XP_006426961.1| (hypothetical protein CICLE_v10026158mg [Citrus clementina]) HSP 1 Score: 461.1 bits (1185), Expect = 1.6e-126 Identity = 236/310 (76.13%), Postives = 268/310 (86.45%), Query Frame = 1
BLAST of CmaCh08G006990 vs. NCBI nr
Match: gi|567868675|ref|XP_006426960.1| (hypothetical protein CICLE_v10026158mg [Citrus clementina]) HSP 1 Score: 460.3 bits (1183), Expect = 2.7e-126 Identity = 236/310 (76.13%), Postives = 268/310 (86.45%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |