CmaCh08G006260 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAGACGCGACTTCAAGTGTCCAGAGTCATGACACCGACCCAGGTCACATAGCCATTGTATATGTAATTACTACCCGTACCGTACAAGCACGTAGGCAATAGACATGATGTTTCTTTCTTTTTACCCTAGTTTCGAGTATTGCTTGAATTGACTTTGACCACTAATTTATTCGTAGGCTCTCAAACTGATTAAAATTTAGATATATACGAAGTAGTTGGTAGATTAATCTAATGAAATGTTGTCGTCTACGCATTTTCAGAAGGTCTGTACCTTATCGAGTCTATGAATTTTAAGTATAATTTGTATTTAGTCTATATTTTTTAAAATATTACATTTTCCCCCCAACTTTTTCCTTTGAGTTTTCATTATTTACACTTACTTTGGGTCGTTGGTATTGACTTTTCTTAATTAATTTAAATATTATGATAAAAAAATTTAAATTAATTGTAATTACATTGAAAAATTAACGATATTGAACTATTTTAATAAATTAAATTAATCAATAAAAAAATTCATAAATGACATGTGCATTAGTGAAAATTTGGGGCAATTATGTAAAATTTTAAAATATAATTCAAAATTAAGAATAAAAATGTAAAATTATAAAATTTAGGACATAAATTCAGATTTTAAGAGTAAAAAGGTAATATTTTAAAAGAAAATGAAAGCTATATTCAAAATTCATCAACAATTGTATTATTATTATTTTTATATAAAATTATTTAGGCAACAAACATAATTTCATTGAAATACGTCGGCCAAAGAGGAAAAGGAGGAAAATTCGAAGGACCTCATCTGCAAAACATTAAAATACGGAAAAATAATACGAACTTTTCGCGCCTTTGGTTTACTTTCGAATTCTGCAGTCTCCAATTCCAGAGGGTTCGATCCAGAGACTGAAGAGTGCAACAATGGTGGACGAAGAAGCTCGACTCTCTGCTGTGATCGATCCTCTTGCTGCTTATTCTGGTATCTATCTCTTTCCGAGCGCATTCGGCATTTTTCCGGATCCGTCGAAGCCACATGGTATTGGAACCGACCTTGACGCCATCCACAACCACCTCAAATCCATGGTATTTGTATCTTTCCATACTCGTTGTATATGATGCTTCCAATTCATCGCTTTTTTGATTTGTGCCATTTTCTGCTTGTTCAACGAGCTCCGTGCGCAATTGAGGGATGAATTGAAATTCATGTTCTGTTCCCATATTTTCAGTAAGTATCTCAAAGCGTGGCGTGGTTTTCCTTTTGATTCGATGGTTCTGGTTACTGTGGAAAGTGTGAGGAATTGAAATGTTTTTTGGCTTTGCGTGTGATGGTTTATTCCTTCCTTAAAATTAAATGCACCGCCTGCTTTGGTTTTTAATAGTAAGCTGGTTAGCCCATTTGATTTGTGAACTGGGATTTGTTTTAGTTCCGGGCATGATGTATAGTTCGCCGGTTTAAGACGGGGGCTTGTTTTCTTAGTATATTGATGCAAGAGCACTGGAAGCTACGGTGCTATAGCCTTGCTTCTTATTACTACTATCTAATTTCCCTTGGGCGCTTGGTTCTCAGTGTACTGATGCAAGAGTATTGAAAATTATGGTTTTACAGTATTGCTTCTCATGATCTCCATTCTCTCATCATCATGGCTCCTATCGAAGCATTTTGTATATATATATATGTCTAGTTTTGGTTTAATTGAGAGTCAACGATTCATAGGTCTCCTAAATTTGCTAGGTCTCAAGAAATCCTAGTAAACTTAAAGAACAGGCCAGATCAATTTTAGACGGTAACTCAAATTTGATGCAATCTGAAGCTGCAACGTTTCTTGCAAACAATGAGAAAAAGGAGGAAGCTACAGTCAAGGCAGAGGAAAATCCACAAGAAAGAAGGCCGGCCTTAAACCGAAAGCGGGCTAGGTTTTCTTTAAAACCTGATGCTAGGTAATGCTTATAATAAGTGAATTTTGCCTACTTTTTCTTTTTTTGTGCGAACAAAAGTAAAATTTTGGCAAACTTTTATGATATCTTCTTCTAATAGACAACCTCCTGTGAGCTTGGAACCAAAAATTGACATTAAACAATTGAAAGACCCAGAGGAGTTCTTTTTGGCCTACGAAAGGCTCGAAAGTAAGTTCCTTATGCTCCTTTTTCCGCACAAATTTCAGATGCGTATAGGTTTGTGTCATTATTTTCTTCCCATTTTGTCATTGACCCACAGATGCCAAAAGAGAAATTCGAAAACAGACGAGAGCAGTTTTGAAGGACTTGAACCTACAAAATCCATCCACGAATATACGCCACGTAGACCAGGAATTCTTGGGTATAATCACTAACATGCTATATTATTAACAAAGTTTTGTGTCTTTTCTTTTAAGCATCATGTTTTCTTTTGGTTGAGAATCCAAAATCTTGTTGTGCACGCAGGAGATCTGTTAGGTACAAGCATCAATATTCGTCAATAAAATCTGAAAATGATCAGAATGTAGAACCCTCGCAAGTGACATTTGAATCAGGTAATATCAGTGTATCAATACCGGGCACAGAAAAAGATTCAAGGCCTATAATTAACTCAGAAAATAAAACTGATGAAGATGTATCCTTTGAGGGTGAGGAGGGGGAGGAGGAGTTCTTTGGTAAGTAATTTATAATGTAGATCAAAATGTAACCTTCTGCGTGCATCTTGGTTCAGTTGATTTTACATTTTATCTATATCATATACTTTCATTTTCTCCCTCTTTTCCTTTTCATTTCGCACTGTCCTCGTTAACACTAAAGGTCAGTCCCCATCGTCCCTCTTTGCTGCTGTGATCCTTTTTTTCTTTGTAGCTTCAATAGCCAAGGTAGAGAACAAAGTGGATAAAATTTTGGATGAATTACTCTCTGCTAATTGTGAAGATCTAGAAGGCGATCGAGCTATCAACATGTTACAGAAGTGCTTGCAGATTAAACCCATTAATTTAGAAAAATTAAACCTTCCAGATTTAGAAGCCACTCGAACAGTGAATTTGAAATCTTCGACAGGCAATCTGCCAAAGCGTAGTTTCAGTGTGGACAATCAGTTACAAATGTTAGAAACTCTGAAATCTAAGTAG ATGATAGACGCGACTTCAAGTGTCCAGAGTCATGACACCGACCCAGGTCACATAGCCATTGTATATTCTCCAATTCCAGAGGGTTCGATCCAGAGACTGAAGAGTGCAACAATGGTGGACGAAGAAGCTCGACTCTCTGCTGTGATCGATCCTCTTGCTGCTTATTCTGGTATCTATCTCTTTCCGAGCGCATTCGGCATTTTTCCGGATCCGTCGAAGCCACATGGTATTGGAACCGACCTTGACGCCATCCACAACCACCTCAAATCCATGGTCTCAAGAAATCCTAGTAAACTTAAAGAACAGGCCAGATCAATTTTAGACGGTAACTCAAATTTGATGCAATCTGAAGCTGCAACGTTTCTTGCAAACAATGAGAAAAAGGAGGAAGCTACAGTCAAGGCAGAGGAAAATCCACAAGAAAGAAGGCCGGCCTTAAACCGAAAGCGGGCTAGGTTTTCTTTAAAACCTGATGCTAGACAACCTCCTGTGAGCTTGGAACCAAAAATTGACATTAAACAATTGAAAGACCCAGAGGAGTTCTTTTTGGCCTACGAAAGGCTCGAAAACGAGAGCAGTTTTGAAGGACTTGAACCTACAAAATCCATCCACGAATATACGCCACGTAGACCAGGAATTCTTGGGAGATCTGTTAGGTACAAGCATCAATATTCGTCAATAAAATCTGAAAATGATCAGAATGTAGAACCCTCGCAAGTGACATTTGAATCAGGTAATATCAGTGTATCAATACCGGGCACAGAAAAAGATTCAAGGCCTATAATTAACTCAGAAAATAAAACTGATGAAGATGTATCCTTTGAGGGTGAGGAGGGGGAGGAGGAGTTCTTTGCTTCAATAGCCAAGGTAGAGAACAAAGTGGATAAAATTTTGGATGAATTACTCTCTGCTAATTGTGAAGATCTAGAAGGCGATCGAGCTATCAACATGTTACAGAAGTGCTTGCAGATTAAACCCATTAATTTAGAAAAATTAAACCTTCCAGATTTAGAAGCCACTCGAACAGTGAATTTGAAATCTTCGACAGGCAATCTGCCAAAGCGTAGTTTCAGTGTGGACAATCAGTTACAAATGTTAGAAACTCTGAAATCTAAGTAG ATGATAGACGCGACTTCAAGTGTCCAGAGTCATGACACCGACCCAGGTCACATAGCCATTGTATATTCTCCAATTCCAGAGGGTTCGATCCAGAGACTGAAGAGTGCAACAATGGTGGACGAAGAAGCTCGACTCTCTGCTGTGATCGATCCTCTTGCTGCTTATTCTGGTATCTATCTCTTTCCGAGCGCATTCGGCATTTTTCCGGATCCGTCGAAGCCACATGGTATTGGAACCGACCTTGACGCCATCCACAACCACCTCAAATCCATGGTCTCAAGAAATCCTAGTAAACTTAAAGAACAGGCCAGATCAATTTTAGACGGTAACTCAAATTTGATGCAATCTGAAGCTGCAACGTTTCTTGCAAACAATGAGAAAAAGGAGGAAGCTACAGTCAAGGCAGAGGAAAATCCACAAGAAAGAAGGCCGGCCTTAAACCGAAAGCGGGCTAGGTTTTCTTTAAAACCTGATGCTAGACAACCTCCTGTGAGCTTGGAACCAAAAATTGACATTAAACAATTGAAAGACCCAGAGGAGTTCTTTTTGGCCTACGAAAGGCTCGAAAACGAGAGCAGTTTTGAAGGACTTGAACCTACAAAATCCATCCACGAATATACGCCACGTAGACCAGGAATTCTTGGGAGATCTGTTAGGTACAAGCATCAATATTCGTCAATAAAATCTGAAAATGATCAGAATGTAGAACCCTCGCAAGTGACATTTGAATCAGGTAATATCAGTGTATCAATACCGGGCACAGAAAAAGATTCAAGGCCTATAATTAACTCAGAAAATAAAACTGATGAAGATGTATCCTTTGAGGGTGAGGAGGGGGAGGAGGAGTTCTTTGCTTCAATAGCCAAGGTAGAGAACAAAGTGGATAAAATTTTGGATGAATTACTCTCTGCTAATTGTGAAGATCTAGAAGGCGATCGAGCTATCAACATGTTACAGAAGTGCTTGCAGATTAAACCCATTAATTTAGAAAAATTAAACCTTCCAGATTTAGAAGCCACTCGAACAGTGAATTTGAAATCTTCGACAGGCAATCTGCCAAAGCGTAGTTTCAGTGTGGACAATCAGTTACAAATGTTAGAAACTCTGAAATCTAAGTAG MIDATSSVQSHDTDPGHIAIVYSPIPEGSIQRLKSATMVDEEARLSAVIDPLAAYSGIYLFPSAFGIFPDPSKPHGIGTDLDAIHNHLKSMVSRNPSKLKEQARSILDGNSNLMQSEAATFLANNEKKEEATVKAEENPQERRPALNRKRARFSLKPDARQPPVSLEPKIDIKQLKDPEEFFLAYERLENESSFEGLEPTKSIHEYTPRRPGILGRSVRYKHQYSSIKSENDQNVEPSQVTFESGNISVSIPGTEKDSRPIINSENKTDEDVSFEGEEGEEEFFASIAKVENKVDKILDELLSANCEDLEGDRAINMLQKCLQIKPINLEKLNLPDLEATRTVNLKSSTGNLPKRSFSVDNQLQMLETLKSK
BLAST of CmaCh08G006260 vs. TrEMBL
Match: A0A0A0K774_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G440590 PE=4 SV=1) HSP 1 Score: 426.0 bits (1094), Expect = 4.7e-116 Identity = 245/347 (70.61%), Postives = 270/347 (77.81%), Query Frame = 1
BLAST of CmaCh08G006260 vs. TrEMBL
Match: D7U0P0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g05090 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.9e-61 Identity = 155/340 (45.59%), Postives = 211/340 (62.06%), Query Frame = 1
BLAST of CmaCh08G006260 vs. TrEMBL
Match: W9STN3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_019452 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 6.0e-55 Identity = 155/367 (42.23%), Postives = 205/367 (55.86%), Query Frame = 1
BLAST of CmaCh08G006260 vs. TrEMBL
Match: M5XHG2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018132mg PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 1.3e-49 Identity = 137/343 (39.94%), Postives = 207/343 (60.35%), Query Frame = 1
BLAST of CmaCh08G006260 vs. TrEMBL
Match: A0A0B0NIJ2_GOSAR (Mannose-1-phosphate guanyltransferase OS=Gossypium arboreum GN=F383_07455 PE=4 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 1.6e-47 Identity = 134/315 (42.54%), Postives = 190/315 (60.32%), Query Frame = 1
BLAST of CmaCh08G006260 vs. TAIR10
Match: AT1G15660.1 (AT1G15660.1 centromere protein C) HSP 1 Score: 110.9 bits (276), Expect = 1.7e-24 Identity = 101/336 (30.06%), Postives = 151/336 (44.94%), Query Frame = 1
BLAST of CmaCh08G006260 vs. NCBI nr
Match: gi|778729240|ref|XP_011659553.1| (PREDICTED: uncharacterized protein LOC101218908 isoform X2 [Cucumis sativus]) HSP 1 Score: 426.0 bits (1094), Expect = 6.7e-116 Identity = 245/347 (70.61%), Postives = 270/347 (77.81%), Query Frame = 1
BLAST of CmaCh08G006260 vs. NCBI nr
Match: gi|778729237|ref|XP_011659552.1| (PREDICTED: uncharacterized protein LOC101218908 isoform X1 [Cucumis sativus]) HSP 1 Score: 426.0 bits (1094), Expect = 6.7e-116 Identity = 245/347 (70.61%), Postives = 270/347 (77.81%), Query Frame = 1
BLAST of CmaCh08G006260 vs. NCBI nr
Match: gi|659122255|ref|XP_008461045.1| (PREDICTED: uncharacterized protein LOC103499749 isoform X2 [Cucumis melo]) HSP 1 Score: 425.2 bits (1092), Expect = 1.1e-115 Identity = 245/347 (70.61%), Postives = 269/347 (77.52%), Query Frame = 1
BLAST of CmaCh08G006260 vs. NCBI nr
Match: gi|659122253|ref|XP_008461044.1| (PREDICTED: uncharacterized protein LOC103499749 isoform X1 [Cucumis melo]) HSP 1 Score: 425.2 bits (1092), Expect = 1.1e-115 Identity = 245/347 (70.61%), Postives = 269/347 (77.52%), Query Frame = 1
BLAST of CmaCh08G006260 vs. NCBI nr
Match: gi|659122257|ref|XP_008461046.1| (PREDICTED: uncharacterized protein LOC103499749 isoform X3 [Cucumis melo]) HSP 1 Score: 425.2 bits (1092), Expect = 1.1e-115 Identity = 245/347 (70.61%), Postives = 269/347 (77.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |